Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391220 | XP_003629451.1 | 61.739 | 115 | 39 | 2 | 362 | 471 | 1 | 115 | 1.49e-31 | 136 |
| Msa0391220 | XP_003629451.1 | 75.196 | 383 | 33 | 5 | 18 | 355 | 1 | 366 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391220 | sp|Q6Z2G9|TLP5_ORYSJ | 43.921 | 403 | 157 | 10 | 18 | 354 | 1 | 400 | 4.25e-89 | 281 |
| Msa0391220 | sp|Q6Z2G9|TLP5_ORYSJ | 45.038 | 131 | 51 | 1 | 362 | 471 | 1 | 131 | 1.10e-22 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391220 | G7LES4 | 61.739 | 115 | 39 | 2 | 362 | 471 | 1 | 115 | 7.13e-32 | 136 |
| Msa0391220 | G7LES4 | 75.196 | 383 | 33 | 5 | 18 | 355 | 1 | 366 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0391220 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391220 | MtrunA17_Chr8g0373331 | 76.045 | 359 | 34 | 5 | 18 | 355 | 1 | 328 | 0.0 | 520 |
| Msa0391220 | MtrunA17_Chr8g0373331 | 61.739 | 115 | 39 | 2 | 362 | 471 | 1 | 115 | 7.52e-36 | 136 |
| Msa0391220 | MtrunA17_Chr8g0373001 | 62.953 | 386 | 92 | 8 | 18 | 354 | 1 | 384 | 3.98e-153 | 442 |
| Msa0391220 | MtrunA17_Chr8g0373001 | 71.552 | 116 | 27 | 2 | 362 | 471 | 1 | 116 | 3.03e-44 | 160 |
| Msa0391220 | MtrunA17_Chr8g0373361 | 58.869 | 389 | 113 | 7 | 9 | 355 | 2 | 385 | 9.10e-135 | 395 |
| Msa0391220 | MtrunA17_Chr8g0373361 | 65.854 | 123 | 35 | 3 | 354 | 471 | 1 | 121 | 2.69e-41 | 152 |
| Msa0391220 | MtrunA17_Chr5g0404321 | 53.333 | 390 | 127 | 9 | 18 | 354 | 1 | 388 | 3.08e-126 | 374 |
| Msa0391220 | MtrunA17_Chr5g0404321 | 55.932 | 118 | 44 | 2 | 362 | 471 | 1 | 118 | 2.39e-34 | 133 |
| Msa0391220 | MtrunA17_Chr1g0155301 | 41.235 | 405 | 159 | 11 | 18 | 354 | 1 | 394 | 4.70e-81 | 258 |
| Msa0391220 | MtrunA17_Chr1g0155301 | 48.120 | 133 | 46 | 2 | 362 | 471 | 1 | 133 | 3.46e-26 | 110 |
| Msa0391220 | MtrunA17_Chr2g0278511 | 38.614 | 404 | 176 | 16 | 18 | 354 | 1 | 399 | 2.38e-69 | 227 |
| Msa0391220 | MtrunA17_Chr2g0278511 | 41.880 | 117 | 61 | 2 | 362 | 471 | 1 | 117 | 4.50e-21 | 95.5 |
| Msa0391220 | MtrunA17_Chr2g0286441 | 41.369 | 336 | 147 | 10 | 60 | 354 | 39 | 365 | 4.05e-67 | 220 |
| Msa0391220 | MtrunA17_Chr2g0286441 | 43.434 | 99 | 55 | 1 | 374 | 471 | 4 | 102 | 6.43e-18 | 85.5 |
| Msa0391220 | MtrunA17_Chr8g0373351 | 46.349 | 315 | 86 | 11 | 58 | 354 | 17 | 266 | 5.03e-66 | 214 |
| Msa0391220 | MtrunA17_Chr1g0201891 | 37.164 | 409 | 179 | 17 | 18 | 354 | 1 | 403 | 6.63e-64 | 213 |
| Msa0391220 | MtrunA17_Chr1g0201891 | 44.828 | 116 | 58 | 2 | 362 | 471 | 1 | 116 | 2.98e-21 | 95.9 |
| Msa0391220 | MtrunA17_Chr2g0315641 | 38.304 | 342 | 149 | 9 | 48 | 354 | 29 | 343 | 1.14e-61 | 206 |
| Msa0391220 | MtrunA17_Chr2g0315641 | 46.479 | 71 | 38 | 0 | 401 | 471 | 35 | 105 | 2.93e-13 | 71.2 |
| Msa0391220 | MtrunA17_Chr8g0373341 | 44.382 | 356 | 135 | 11 | 18 | 359 | 1 | 307 | 3.86e-60 | 200 |
| Msa0391220 | MtrunA17_Chr8g0373341 | 65.263 | 95 | 30 | 1 | 362 | 453 | 1 | 95 | 2.72e-25 | 106 |
| Msa0391220 | MtrunA17_Chr1g0196071 | 36.480 | 392 | 176 | 14 | 18 | 354 | 1 | 374 | 2.40e-59 | 200 |
| Msa0391220 | MtrunA17_Chr1g0196071 | 38.017 | 121 | 56 | 3 | 362 | 471 | 1 | 113 | 6.22e-18 | 85.9 |
| Msa0391220 | MtrunA17_Chr2g0315651 | 35.928 | 334 | 146 | 10 | 59 | 354 | 36 | 339 | 4.73e-45 | 161 |
| Msa0391220 | MtrunA17_Chr2g0315651 | 43.662 | 71 | 40 | 0 | 401 | 471 | 30 | 100 | 3.48e-11 | 64.7 |
| Msa0391220 | MtrunA17_Chr1g0156151 | 41.860 | 215 | 79 | 5 | 18 | 189 | 1 | 212 | 9.40e-38 | 137 |
| Msa0391220 | MtrunA17_Chr1g0156151 | 42.982 | 114 | 61 | 2 | 362 | 471 | 1 | 114 | 3.32e-17 | 80.5 |
| Msa0391220 | MtrunA17_Chr3g0091401 | 53.333 | 75 | 28 | 1 | 104 | 178 | 10 | 77 | 3.01e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391220 | AT2G18280.2 | 45.550 | 382 | 146 | 11 | 18 | 354 | 1 | 365 | 2.38e-89 | 278 |
| Msa0391220 | AT2G18280.2 | 54.237 | 118 | 39 | 3 | 362 | 471 | 1 | 111 | 8.06e-28 | 115 |
| Msa0391220 | AT2G18280.1 | 45.550 | 382 | 146 | 11 | 18 | 354 | 1 | 365 | 2.38e-89 | 278 |
| Msa0391220 | AT2G18280.1 | 54.237 | 118 | 39 | 3 | 362 | 471 | 1 | 111 | 8.06e-28 | 115 |
| Msa0391220 | AT2G47900.2 | 39.031 | 392 | 170 | 13 | 18 | 354 | 1 | 378 | 1.02e-67 | 223 |
| Msa0391220 | AT2G47900.2 | 40.000 | 115 | 64 | 1 | 362 | 471 | 1 | 115 | 7.69e-21 | 95.1 |
| Msa0391220 | AT2G47900.1 | 39.031 | 392 | 170 | 13 | 18 | 354 | 1 | 378 | 1.02e-67 | 223 |
| Msa0391220 | AT2G47900.1 | 40.000 | 115 | 64 | 1 | 362 | 471 | 1 | 115 | 7.69e-21 | 95.1 |
| Msa0391220 | AT2G47900.3 | 38.931 | 393 | 170 | 13 | 18 | 354 | 1 | 379 | 2.51e-67 | 222 |
| Msa0391220 | AT2G47900.3 | 40.000 | 115 | 64 | 1 | 362 | 471 | 1 | 115 | 7.76e-21 | 95.1 |
| Msa0391220 | AT1G47270.3 | 38.889 | 396 | 147 | 15 | 18 | 354 | 1 | 360 | 1.23e-64 | 214 |
| Msa0391220 | AT1G47270.3 | 48.352 | 91 | 37 | 1 | 391 | 471 | 17 | 107 | 7.45e-19 | 89.0 |
| Msa0391220 | AT1G47270.2 | 38.889 | 396 | 147 | 15 | 18 | 354 | 25 | 384 | 1.62e-64 | 214 |
| Msa0391220 | AT1G47270.2 | 48.352 | 91 | 37 | 1 | 391 | 471 | 41 | 131 | 8.94e-19 | 89.0 |
| Msa0391220 | AT1G47270.1 | 38.889 | 396 | 147 | 15 | 18 | 354 | 26 | 385 | 1.99e-64 | 214 |
| Msa0391220 | AT1G47270.1 | 48.352 | 91 | 37 | 1 | 391 | 471 | 42 | 132 | 9.43e-19 | 88.6 |
| Msa0391220 | AT1G25280.1 | 39.503 | 362 | 151 | 12 | 59 | 354 | 58 | 417 | 2.16e-64 | 215 |
| Msa0391220 | AT1G25280.1 | 40.984 | 122 | 60 | 1 | 362 | 471 | 1 | 122 | 2.62e-20 | 93.6 |
| Msa0391220 | AT1G76900.2 | 36.879 | 423 | 183 | 16 | 11 | 354 | 10 | 427 | 8.36e-63 | 211 |
| Msa0391220 | AT1G76900.2 | 48.958 | 96 | 47 | 1 | 376 | 471 | 27 | 120 | 1.69e-20 | 94.4 |
| Msa0391220 | AT1G76900.1 | 36.879 | 423 | 183 | 16 | 11 | 354 | 10 | 427 | 8.36e-63 | 211 |
| Msa0391220 | AT1G76900.1 | 48.958 | 96 | 47 | 1 | 376 | 471 | 27 | 120 | 1.69e-20 | 94.4 |
| Msa0391220 | AT1G76900.3 | 36.879 | 423 | 183 | 16 | 11 | 354 | 10 | 427 | 8.36e-63 | 211 |
| Msa0391220 | AT1G76900.3 | 48.958 | 96 | 47 | 1 | 376 | 471 | 27 | 120 | 1.69e-20 | 94.4 |
| Msa0391220 | AT1G43640.1 | 36.298 | 416 | 171 | 20 | 18 | 354 | 1 | 401 | 3.37e-60 | 204 |
| Msa0391220 | AT1G43640.1 | 38.136 | 118 | 65 | 3 | 362 | 471 | 1 | 118 | 2.72e-16 | 81.3 |
| Msa0391220 | AT1G53320.1 | 37.101 | 345 | 146 | 8 | 52 | 354 | 36 | 351 | 3.90e-57 | 194 |
| Msa0391220 | AT1G53320.1 | 49.206 | 63 | 32 | 0 | 408 | 470 | 44 | 106 | 8.02e-11 | 64.3 |
| Msa0391220 | AT1G43640.2 | 37.101 | 345 | 145 | 16 | 72 | 354 | 1 | 335 | 2.44e-53 | 184 |
| Msa0391220 | AT5G18680.1 | 36.765 | 340 | 159 | 12 | 57 | 354 | 36 | 361 | 1.05e-51 | 180 |
| Msa0391220 | AT3G06380.1 | 38.438 | 333 | 154 | 11 | 60 | 354 | 33 | 352 | 2.09e-51 | 179 |
| Msa0391220 | AT3G06380.1 | 52.308 | 65 | 30 | 1 | 408 | 471 | 33 | 97 | 1.25e-11 | 66.6 |
| Msa0391220 | AT5G18680.2 | 34.892 | 278 | 124 | 13 | 119 | 354 | 7 | 269 | 2.23e-30 | 120 |
| Msa0391220 | AT1G61940.2 | 56.180 | 89 | 39 | 0 | 63 | 151 | 1 | 89 | 4.00e-28 | 113 |
| Msa0391220 | AT1G61940.2 | 50.820 | 61 | 30 | 0 | 411 | 471 | 1 | 61 | 5.22e-12 | 66.6 |
| Msa0391220 | AT3G06380.2 | 34.944 | 269 | 125 | 10 | 123 | 354 | 5 | 260 | 5.24e-28 | 113 |
| Msa0391220 | AT1G25280.3 | 33.628 | 226 | 111 | 10 | 166 | 354 | 16 | 239 | 2.49e-21 | 94.0 |
| Msa0391220 | AT1G25280.2 | 33.628 | 226 | 111 | 10 | 166 | 354 | 16 | 239 | 2.49e-21 | 94.0 |
| Msa0391220 | AT1G61940.1 | 51.351 | 74 | 33 | 1 | 63 | 136 | 1 | 71 | 1.61e-16 | 79.7 |
| Msa0391220 | AT1G61940.1 | 50.820 | 61 | 30 | 0 | 411 | 471 | 1 | 61 | 5.44e-12 | 66.2 |
Find 102 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATTATTCTCCCACTTTC+TGG | 0.131166 | 3_2:+2729234 | Msa0391220:CDS |
| ATCCTACTTGGTCGAAAATT+TGG | 0.160953 | 3_2:-2721787 | None:intergenic |
| CATGAGGGAAAAGACTAATT+TGG | 0.207543 | 3_2:-2729263 | None:intergenic |
| ATTACCTGCTTCAATGAAAT+AGG | 0.231585 | 3_2:-2729212 | None:intergenic |
| ATTACCTGCTTCAATGAAAT+AGG | 0.248006 | 3_2:-2720357 | None:intergenic |
| GTTCTACCGGAGAAACATTA+TGG | 0.250734 | 3_2:-2722233 | None:intergenic |
| ATCTGATACAATGCTTTATT+AGG | 0.257864 | 3_2:+2720482 | Msa0391220:CDS |
| TCTACCACCTGAATTGCTTT+TGG | 0.262620 | 3_2:+2720191 | Msa0391220:CDS |
| ATGATGCAGTACATTCTTCT+TGG | 0.288249 | 3_2:-2721898 | None:intergenic |
| TATGGCAGGTCTGATTTCTT+TGG | 0.289591 | 3_2:+2721712 | Msa0391220:intron |
| ATTCCTGCTGTACTTAGGTT+TGG | 0.322750 | 3_2:+2720525 | Msa0391220:CDS |
| CTACATGCTCGAACTCTTCT+TGG | 0.336761 | 3_2:-2721832 | None:intergenic |
| GGAAATTGATTCTATTCAAC+AGG | 0.339398 | 3_2:+2729010 | Msa0391220:CDS |
| TTGAAGAGAGTGAGAGATAT+TGG | 0.344771 | 3_2:+2729084 | Msa0391220:CDS |
| GTGTTGGTGTTTAGACTTCA+TGG | 0.351367 | 3_2:+2722149 | Msa0391220:CDS |
| ATTACATCCAAAAGCAATTC+AGG | 0.366022 | 3_2:-2720198 | None:intergenic |
| TCTACCACATGAATTGCTTA+TGG | 0.366512 | 3_2:+2729046 | Msa0391220:CDS |
| TTAGAAGAGTGCATTTAGAT+TGG | 0.371475 | 3_2:+2719975 | None:intergenic |
| GTCAAACTCACATCTTGCTT+TGG | 0.379534 | 3_2:+2728989 | Msa0391220:CDS |
| GAAAGGGTAGTCTTGCAGTT+TGG | 0.405279 | 3_2:+2722258 | Msa0391220:CDS |
| GGTGCTGGTGAAGGAGAAAA+AGG | 0.407551 | 3_2:-2722000 | None:intergenic |
| GCAGAGTATGAATTTGTCAT+TGG | 0.417833 | 3_2:-2722036 | None:intergenic |
| TTCTATTCAACAGGGACAAT+GGG | 0.435024 | 3_2:+2729019 | Msa0391220:CDS |
| TCTACATTCCTGCTGTACTT+AGG | 0.445236 | 3_2:+2720520 | Msa0391220:CDS |
| CAGACAACAATGGCACGGGC+AGG | 0.450413 | 3_2:-2720252 | None:intergenic |
| GTGCTTCGGTATGTAAATCA+TGG | 0.451227 | 3_2:+2729132 | Msa0391220:CDS |
| GCATGCCCATCAGAGCTACT+AGG | 0.452217 | 3_2:+2722057 | Msa0391220:CDS |
| CATTGTTGTCTGTTGTGCTT+CGG | 0.457188 | 3_2:+2720263 | Msa0391220:CDS |
| CTCAGTCCTAGTAGCTCTGA+TGG | 0.460252 | 3_2:-2722063 | None:intergenic |
| ATTTCCTATTTCATTGAAGC+AGG | 0.465510 | 3_2:+2720353 | Msa0391220:CDS |
| ATTTCCTATTTCATTGAAGC+AGG | 0.465510 | 3_2:+2729208 | Msa0391220:CDS |
| TTCTCCTTCACCAGCACCGA+AGG | 0.479949 | 3_2:+2722005 | Msa0391220:CDS |
| TTCTACCGGAGAAACATTAT+GGG | 0.481885 | 3_2:-2722232 | None:intergenic |
| TTGAAGAGAGTGAGACATCT+TGG | 0.483464 | 3_2:+2720229 | Msa0391220:CDS |
| TCAAAAGCAAGGATTGCATA+AGG | 0.485337 | 3_2:+2722112 | Msa0391220:CDS |
| TTTCCCTTCGGTGCTGGTGA+AGG | 0.486092 | 3_2:-2722009 | None:intergenic |
| TATCAGATAATCACTGGGAC+CGG | 0.491936 | 3_2:-2720467 | None:intergenic |
| ACTGTCGTATATAGTGAAAT+CGG | 0.492029 | 3_2:-2721737 | None:intergenic |
| TAGGTAACAATGTTGGAGAC+GGG | 0.492846 | 3_2:-2721963 | None:intergenic |
| GTCTTGCAGTTTGGAAAGAT+CGG | 0.499553 | 3_2:+2722267 | Msa0391220:CDS |
| CACAACAGACAACAATGGCA+CGG | 0.500310 | 3_2:-2720257 | None:intergenic |
| TCCATCCCATAATGTTTCTC+CGG | 0.504105 | 3_2:+2722227 | Msa0391220:CDS |
| GCATTGTATCAGATAATCAC+TGG | 0.505327 | 3_2:-2720473 | None:intergenic |
| CAAAAGCAAGGATTGCATAA+GGG | 0.506662 | 3_2:+2722113 | Msa0391220:CDS |
| TTTCTCCGGTAGAACGAGAA+AGG | 0.508143 | 3_2:+2722241 | Msa0391220:CDS |
| TGATACAATGCTTTATTAGG+AGG | 0.523462 | 3_2:+2720485 | Msa0391220:CDS |
| ATTCTATTCAACAGGGACAA+TGG | 0.527795 | 3_2:+2729018 | Msa0391220:CDS |
| ACAAGGGTTGGATCGAGCCT+TGG | 0.530280 | 3_2:-2722086 | None:intergenic |
| ACCCTTGTTGCTCAAAAGCA+AGG | 0.534064 | 3_2:+2722101 | Msa0391220:CDS |
| TTAGAATTAAACATCCTACT+TGG | 0.534072 | 3_2:-2721799 | None:intergenic |
| ACAACAGACAACAATGGCAC+GGG | 0.534843 | 3_2:-2720256 | None:intergenic |
| ACTACCCTTTCTCGTTCTAC+CGG | 0.546215 | 3_2:-2722246 | None:intergenic |
| TGTTGGTGTTTAGACTTCAT+GGG | 0.546310 | 3_2:+2722150 | Msa0391220:CDS |
| CTTGACAATCTCTAATGTGA+TGG | 0.550167 | 3_2:-2720304 | None:intergenic |
| GCTCCAAACCTAAGTACAGC+AGG | 0.551793 | 3_2:-2720528 | None:intergenic |
| TTAGGTAACAATGTTGGAGA+CGG | 0.553086 | 3_2:-2721964 | None:intergenic |
| AAGCATGGTCGGAGAACTCA+AGG | 0.564464 | 3_2:+2728911 | Msa0391220:CDS |
| TTCTCCGGTAGAACGAGAAA+GGG | 0.571393 | 3_2:+2722242 | Msa0391220:CDS |
| AGGAAATGGTGCTAACAAGA+TGG | 0.575547 | 3_2:-2721855 | None:intergenic |
| AAGCATAGTCTGCAAACTCA+AGG | 0.577080 | 3_2:+2720041 | Msa0391220:CDS |
| ATTTGGATTAGACCAGAAAG+TGG | 0.578148 | 3_2:-2729246 | None:intergenic |
| TGCTTATGGACATAATCCGT+AGG | 0.579102 | 3_2:+2729060 | Msa0391220:CDS |
| TCAGTCCTAGTAGCTCTGAT+GGG | 0.580231 | 3_2:-2722062 | None:intergenic |
| TTGTGTTGCTACAGGAAACA+TGG | 0.580273 | 3_2:+2728881 | Msa0391220:CDS |
| GCTTATGGACATAATCCGTA+GGG | 0.581218 | 3_2:+2729061 | Msa0391220:CDS |
| ATCAGATAATCACTGGGACC+GGG | 0.582037 | 3_2:-2720466 | None:intergenic |
| AAGACAACAGCAGAACGCGC+AGG | 0.588296 | 3_2:-2729107 | None:intergenic |
| ATGGCATTGAAAAGCATGGT+CGG | 0.597357 | 3_2:+2728900 | Msa0391220:CDS |
| ACCCATTCAACAGGGACAGT+GGG | 0.600727 | 3_2:+2720164 | Msa0391220:intron |
| ACCGGAGAAACATTATGGGA+TGG | 0.601201 | 3_2:-2722228 | None:intergenic |
| ATCAAGACTCTTCCGCAATG+TGG | 0.608567 | 3_2:+2729176 | Msa0391220:CDS |
| AGCATAGTCTGCAAACTCAA+GGG | 0.610947 | 3_2:+2720042 | Msa0391220:CDS |
| GAGTTACATCTAGTGTAACA+TGG | 0.616069 | 3_2:-2720134 | None:intergenic |
| AGATCAAGCATAGGCTCCGT+CGG | 0.617033 | 3_2:+2720103 | Msa0391220:CDS |
| CATTGTATCAGATAATCACT+GGG | 0.618360 | 3_2:-2720472 | None:intergenic |
| TCTCACTCTCTTCAACCCTA+CGG | 0.618635 | 3_2:-2729076 | None:intergenic |
| TCTCCTTCACCAGCACCGAA+GGG | 0.619211 | 3_2:+2722006 | Msa0391220:CDS |
| AAACATGGCATTGAAAAGCA+TGG | 0.625441 | 3_2:+2728896 | Msa0391220:CDS |
| TTTGGATTAGACCAGAAAGT+GGG | 0.626695 | 3_2:-2729245 | None:intergenic |
| AACCCATTCAACAGGGACAG+TGG | 0.626967 | 3_2:+2720163 | Msa0391220:intron |
| TCTCACTCTCTTCAACCCTA+CGG | 0.632526 | 3_2:-2720221 | None:intergenic |
| GTTACCACTATTCAGGAAGG+GGG | 0.635875 | 3_2:+2721934 | Msa0391220:intron |
| GGTTGAACTGCAGCATCATG+TGG | 0.636955 | 3_2:-2721766 | None:intergenic |
| GCATGGTCGGAGAACTCAAG+GGG | 0.647843 | 3_2:+2728913 | Msa0391220:CDS |
| TAACATGGGACTTCGTCCGA+CGG | 0.648548 | 3_2:-2720119 | None:intergenic |
| GTCAAGACTCCTCAGCAATG+TGG | 0.658064 | 3_2:+2720321 | Msa0391220:CDS |
| AGTTACATCTAGTGTAACAT+GGG | 0.658395 | 3_2:-2720133 | None:intergenic |
| AGGTAACAATGTTGGAGACG+GGG | 0.672550 | 3_2:-2721962 | None:intergenic |
| CTTCGGTATGTAAATCGTGG+AGG | 0.672621 | 3_2:+2720280 | Msa0391220:CDS |
| GAAATTGATTCTATTCAACA+GGG | 0.678309 | 3_2:+2729011 | Msa0391220:CDS |
| GAGCTACTAGGACTGAGCCA+AGG | 0.685945 | 3_2:+2722069 | Msa0391220:CDS |
| ACATCCAAAAGCAATTCAGG+TGG | 0.687047 | 3_2:-2720195 | None:intergenic |
| CGAAGCACAACAGACAACAA+TGG | 0.693040 | 3_2:-2720262 | None:intergenic |
| GTAAGCGTTCCACATTGCTG+AGG | 0.696256 | 3_2:-2720330 | None:intergenic |
| AGAGTGCTGAGATCAAGCAT+AGG | 0.696911 | 3_2:+2720094 | Msa0391220:CDS |
| AGCATGGTCGGAGAACTCAA+GGG | 0.702833 | 3_2:+2728912 | Msa0391220:CDS |
| GGGATGAGCAGCGAAAGTGT+TGG | 0.703904 | 3_2:+2722133 | Msa0391220:CDS |
| TGAACTGCAGCATCATGTGG+AGG | 0.706539 | 3_2:-2721763 | None:intergenic |
| ATGTCCATAAGCAATTCATG+TGG | 0.710807 | 3_2:-2729050 | None:intergenic |
| CTTCGGTATGTAAATCATGG+AGG | 0.716243 | 3_2:+2729135 | Msa0391220:CDS |
| GTGCTTCGGTATGTAAATCG+TGG | 0.718786 | 3_2:+2720277 | Msa0391220:CDS |
| AATGTGATCATTCCACATTG+CGG | 0.763720 | 3_2:-2729188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTTTTTTAAATAATG+TGG | - | chr3_2:2720991-2721010 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAAAAGAATACA+AGG | + | chr3_2:2720997-2721016 | Msa0391220:intron | 10.0% |
| !! | TATTCAACAAAATATATAAT+TGG | + | chr3_2:2721020-2721039 | Msa0391220:intron | 10.0% |
| !!! | ATAATAGAAAATCAATTTTA+TGG | + | chr3_2:2724720-2724739 | Msa0391220:intron | 10.0% |
| !! | ATAAAATATAAATGATTGTA+AGG | - | chr3_2:2724852-2724871 | None:intergenic | 10.0% |
| !! | ACTCATTTAAATATTTAATT+AGG | - | chr3_2:2724884-2724903 | None:intergenic | 10.0% |
| !! | ATTCCATATTAATAAAAAAT+GGG | - | chr3_2:2726359-2726378 | None:intergenic | 10.0% |
| !! | AATTCCATATTAATAAAAAA+TGG | - | chr3_2:2726360-2726379 | None:intergenic | 10.0% |
| !!! | AAAAAATATTTTTGTTGTAA+AGG | + | chr3_2:2726532-2726551 | Msa0391220:intron | 10.0% |
| !! | AACATTTATTTATTCAATAT+TGG | - | chr3_2:2727034-2727053 | None:intergenic | 10.0% |
| !!! | ATAAATGTTAATTTTTTTAG+AGG | + | chr3_2:2727045-2727064 | Msa0391220:intron | 10.0% |
| !! | AATAAATATTTGTATTTGTT+TGG | + | chr3_2:2728785-2728804 | Msa0391220:intron | 10.0% |
| !! | GATTATTAATGAATATAACA+AGG | + | chr3_2:2723027-2723046 | Msa0391220:intron | 15.0% |
| !! | AATCATATTGTCTATATATA+GGG | - | chr3_2:2724073-2724092 | None:intergenic | 15.0% |
| !! | AAATCATATTGTCTATATAT+AGG | - | chr3_2:2724074-2724093 | None:intergenic | 15.0% |
| !! | AATAAAACAAAAAGATAATG+AGG | - | chr3_2:2724148-2724167 | None:intergenic | 15.0% |
| !! | ATAAATTAGAATATATACGA+AGG | + | chr3_2:2724397-2724416 | Msa0391220:intron | 15.0% |
| !!! | AAAATGCACTTAAAATTTTA+GGG | - | chr3_2:2724814-2724833 | None:intergenic | 15.0% |
| !! | TAAATATTTAATTAGGATGA+AGG | - | chr3_2:2724877-2724896 | None:intergenic | 15.0% |
| !! | TTTAATAATAGAATGAATGA+TGG | - | chr3_2:2725009-2725028 | None:intergenic | 15.0% |
| !!! | TTAATTACCTTATTTTTAAG+TGG | + | chr3_2:2725071-2725090 | Msa0391220:intron | 15.0% |
| !! | TTCTTATTAATATCTTTCAA+TGG | + | chr3_2:2725140-2725159 | Msa0391220:intron | 15.0% |
| !! | AAACAATGATAATAATTTGA+TGG | - | chr3_2:2725203-2725222 | None:intergenic | 15.0% |
| !!! | ATGATTTTGTTAAATCTAAT+TGG | - | chr3_2:2725277-2725296 | None:intergenic | 15.0% |
| !! | TTCTAATTCAATGTATTTAT+TGG | + | chr3_2:2725499-2725518 | Msa0391220:intron | 15.0% |
| !!! | GAAAACAATTAATTTTGTTT+CGG | + | chr3_2:2725582-2725601 | Msa0391220:intron | 15.0% |
| !!! | AAAACAATTAATTTTGTTTC+GGG | + | chr3_2:2725583-2725602 | Msa0391220:intron | 15.0% |
| !!! | AGAAAATAATTGACATTTTA+AGG | + | chr3_2:2725803-2725822 | Msa0391220:intron | 15.0% |
| !! | TGTAGATAGTATAATATTTA+AGG | - | chr3_2:2726165-2726184 | None:intergenic | 15.0% |
| !! | TAAATTATAATAAGTGATGA+TGG | - | chr3_2:2726231-2726250 | None:intergenic | 15.0% |
| !!! | TAATTTACAATTTTTTGTCT+TGG | + | chr3_2:2726244-2726263 | Msa0391220:intron | 15.0% |
| !!! | ATTCCCATTTTTTATTAATA+TGG | + | chr3_2:2726353-2726372 | Msa0391220:intron | 15.0% |
| !!! | ATTTAATTTCAATTGAATAC+CGG | - | chr3_2:2726444-2726463 | None:intergenic | 15.0% |
| !! | ATTGCTCTAATTTATATAAA+CGG | + | chr3_2:2726887-2726906 | Msa0391220:intron | 15.0% |
| !!! | TATCATTTCCATTATTTTTT+TGG | - | chr3_2:2726927-2726946 | None:intergenic | 15.0% |
| !! | ATGACATTCATATTTAAAAA+TGG | - | chr3_2:2726961-2726980 | None:intergenic | 15.0% |
| !!! | AATTTTTTAATTTAACATCG+TGG | - | chr3_2:2727117-2727136 | None:intergenic | 15.0% |
| !! | TAGTAATCTTAAATTAAGTT+GGG | - | chr3_2:2727260-2727279 | None:intergenic | 15.0% |
| !!! | TTAAAATAAATAAGTGTTGT+TGG | + | chr3_2:2727403-2727422 | Msa0391220:intron | 15.0% |
| !! | TATAACAATATAGTTATTTG+TGG | + | chr3_2:2727428-2727447 | Msa0391220:intron | 15.0% |
| !! | TACTTAATACCTTAAATATT+CGG | - | chr3_2:2727974-2727993 | None:intergenic | 15.0% |
| !! | ATTAACAAGGTTTATTATTA+TGG | - | chr3_2:2728353-2728372 | None:intergenic | 15.0% |
| !! | ATAGCATAAAAATATTAACA+AGG | - | chr3_2:2728366-2728385 | None:intergenic | 15.0% |
| !! | TGAATATAACATAATTCAAT+CGG | - | chr3_2:2728460-2728479 | None:intergenic | 15.0% |
| !! | TTCATAAGTTATTATAAAGA+TGG | + | chr3_2:2728516-2728535 | Msa0391220:intron | 15.0% |
| !! | TCATAAGTTATTATAAAGAT+GGG | + | chr3_2:2728517-2728536 | Msa0391220:intron | 15.0% |
| !! | AAATTGATATTCATTGTCTT+AGG | - | chr3_2:2720593-2720612 | None:intergenic | 20.0% |
| !!! | ATAATGTGGATATTTGTTTT+TGG | - | chr3_2:2720977-2720996 | None:intergenic | 20.0% |
| !! | GATAACATTATAGATAATGA+AGG | - | chr3_2:2721111-2721130 | None:intergenic | 20.0% |
| !! | TTATCATAAAGATCATAATC+AGG | + | chr3_2:2721126-2721145 | Msa0391220:intron | 20.0% |
| !!! | ATTTATTTTCATTTAGGTTG+TGG | + | chr3_2:2721380-2721399 | Msa0391220:intron | 20.0% |
| !!! | CAACTTGATTTTTATATGTA+TGG | + | chr3_2:2721694-2721713 | Msa0391220:intron | 20.0% |
| !!! | AATATTTTAGGTAACAATGT+TGG | - | chr3_2:2721973-2721992 | None:intergenic | 20.0% |
| !!! | AAAGGTTCATCAAATATTTT+AGG | - | chr3_2:2721985-2722004 | None:intergenic | 20.0% |
| !!! | AAATTTTAGAAACTGACATA+CGG | + | chr3_2:2722573-2722592 | Msa0391220:intron | 20.0% |
| !! | TAATTCAATACATTTATGTG+TGG | + | chr3_2:2723273-2723292 | Msa0391220:intron | 20.0% |
| !! | ATAATTTCCACAAAACTTAT+CGG | + | chr3_2:2723496-2723515 | Msa0391220:intron | 20.0% |
| !! | GAAAAACATTAAATGAAATG+GGG | - | chr3_2:2723934-2723953 | None:intergenic | 20.0% |
| !! | GGAAAAACATTAAATGAAAT+GGG | - | chr3_2:2723935-2723954 | None:intergenic | 20.0% |
| !! | TGGAAAAACATTAAATGAAA+TGG | - | chr3_2:2723936-2723955 | None:intergenic | 20.0% |
| !!! | AGTTATGATTCAATTTTGAT+TGG | - | chr3_2:2724002-2724021 | None:intergenic | 20.0% |
| !!! | ATATCATGATCAATTTTGAT+TGG | - | chr3_2:2724042-2724061 | None:intergenic | 20.0% |
| !! | ATCATATTGTCTATATATAG+GGG | - | chr3_2:2724072-2724091 | None:intergenic | 20.0% |
| !!! | TTCTCTTTTCAATTTTCTTT+TGG | + | chr3_2:2724259-2724278 | Msa0391220:intron | 20.0% |
| !!! | AAATGTTCTTTGTTTTTGTT+CGG | + | chr3_2:2724320-2724339 | Msa0391220:intron | 20.0% |
| !! | GGGATTAAAATAAAACAAAA+GGG | - | chr3_2:2724461-2724480 | None:intergenic | 20.0% |
| !! | AGGGATTAAAATAAAACAAA+AGG | - | chr3_2:2724462-2724481 | None:intergenic | 20.0% |
| !!! | AAAAAAATTGTGAGTATTGA+GGG | - | chr3_2:2724481-2724500 | None:intergenic | 20.0% |
| !!! | TGCTCTTTTATATGTTATTT+TGG | + | chr3_2:2724570-2724589 | Msa0391220:intron | 20.0% |
| !!! | TTCCTTTTTCTTTAACTAAA+AGG | + | chr3_2:2724775-2724794 | Msa0391220:intron | 20.0% |
| !!! | TCCTTTTTCTTTAACTAAAA+GGG | + | chr3_2:2724776-2724795 | Msa0391220:intron | 20.0% |
| !!! | GAAAATGCACTTAAAATTTT+AGG | - | chr3_2:2724815-2724834 | None:intergenic | 20.0% |
| !!! | CATTGAAACATGTTTTTTTT+AGG | - | chr3_2:2725176-2725195 | None:intergenic | 20.0% |
| !! | AGATTTAACAAAATCATGAA+AGG | + | chr3_2:2725280-2725299 | Msa0391220:intron | 20.0% |
| !! | GTTATACGAATTATATTTGT+TGG | - | chr3_2:2725355-2725374 | None:intergenic | 20.0% |
| !!! | TGCAAAATGTCTTTTTTTTA+GGG | - | chr3_2:2725773-2725792 | None:intergenic | 20.0% |
| !!! | TTGCAAAATGTCTTTTTTTT+AGG | - | chr3_2:2725774-2725793 | None:intergenic | 20.0% |
| !! | ATTTATGGAGAAAAAAAAGT+AGG | + | chr3_2:2725862-2725881 | Msa0391220:intron | 20.0% |
| !! | TTTATGGAGAAAAAAAAGTA+GGG | + | chr3_2:2725863-2725882 | Msa0391220:intron | 20.0% |
| !!! | TTATGTCCCTAATTTTTTAT+CGG | - | chr3_2:2725903-2725922 | None:intergenic | 20.0% |
| !! | AGATGATAAAAACAACAATT+GGG | - | chr3_2:2725986-2726005 | None:intergenic | 20.0% |
| !! | AAGATGATAAAAACAACAAT+TGG | - | chr3_2:2725987-2726006 | None:intergenic | 20.0% |
| !!! | CAAATAAATTTTAGCATATG+TGG | - | chr3_2:2726068-2726087 | None:intergenic | 20.0% |
| !!! | CATTTTTTTACCAAAGTTTA+AGG | - | chr3_2:2726121-2726140 | None:intergenic | 20.0% |
| !!! | GGCTTTAGTAAAAAAAATTA+AGG | - | chr3_2:2726144-2726163 | None:intergenic | 20.0% |
| !! | AATCATATTTATGTGGTTAA+AGG | - | chr3_2:2726417-2726436 | None:intergenic | 20.0% |
| !! | CACATAAATATGATTAATAC+CGG | + | chr3_2:2726422-2726441 | Msa0391220:intron | 20.0% |
| !!! | AATTTTTTACCTCTCAAAAT+AGG | + | chr3_2:2726492-2726511 | Msa0391220:intron | 20.0% |
| !! | TCTAATTTATATAAACGGAA+AGG | + | chr3_2:2726892-2726911 | Msa0391220:intron | 20.0% |
| !! | TATTCTCTCCAAAAAAATAA+TGG | + | chr3_2:2726916-2726935 | Msa0391220:intron | 20.0% |
| !! | CTAGTAATCTTAAATTAAGT+TGG | - | chr3_2:2727261-2727280 | None:intergenic | 20.0% |
| !!! | CAACTTAATTTAAGATTACT+AGG | + | chr3_2:2727259-2727278 | Msa0391220:intron | 20.0% |
| !! | CATAAACATTATTCTCTATT+AGG | - | chr3_2:2727337-2727356 | None:intergenic | 20.0% |
| !! | ATCTAATGTCTTAAGATTTA+AGG | - | chr3_2:2727740-2727759 | None:intergenic | 20.0% |
| !! | ACATAAATAGGCAATTATTT+GGG | + | chr3_2:2728200-2728219 | Msa0391220:intron | 20.0% |
| !!! | TATCATTGATTTTGTTACTT+AGG | - | chr3_2:2728581-2728600 | None:intergenic | 20.0% |
| !! | AAGTAACAAAATCAATGATA+TGG | + | chr3_2:2728581-2728600 | Msa0391220:intron | 20.0% |
| !! | TATCATCAAACAAACAAAAT+TGG | - | chr3_2:2728704-2728723 | None:intergenic | 20.0% |
| !! | TTAAAAATGGAATATCAAAG+CGG | + | chr3_2:2728937-2728956 | Msa0391220:CDS | 20.0% |
| ! | TACAAATTATTCGTATTGCT+CGG | + | chr3_2:2720407-2720426 | Msa0391220:intron | 25.0% |
| !! | ATCTGATACAATGCTTTATT+AGG | + | chr3_2:2720482-2720501 | Msa0391220:CDS | 25.0% |
| ! | AAACAAAACCCAAAAACTTA+GGG | - | chr3_2:2720687-2720706 | None:intergenic | 25.0% |
| ! | TAAACAAAACCCAAAAACTT+AGG | - | chr3_2:2720688-2720707 | None:intergenic | 25.0% |
| ! | GAATAAGATCTTAGATTACT+TGG | + | chr3_2:2720724-2720743 | Msa0391220:intron | 25.0% |
| !! | TTACATGTTCTAAACTGAAA+AGG | - | chr3_2:2720809-2720828 | None:intergenic | 25.0% |
| !!! | TTTTCAGTTTAGAACATGTA+AGG | + | chr3_2:2720808-2720827 | Msa0391220:intron | 25.0% |
| !!! | ATAATCAAGATAGCTGATTT+TGG | - | chr3_2:2720856-2720875 | None:intergenic | 25.0% |
| ! | ATTCATCTATTAAAGATCCA+AGG | - | chr3_2:2721080-2721099 | None:intergenic | 25.0% |
| ! | GTTATTCTTGCAATTCATTA+AGG | + | chr3_2:2721322-2721341 | Msa0391220:intron | 25.0% |
| !! | GATTTACCCTTTTATTCTAT+TGG | + | chr3_2:2721643-2721662 | Msa0391220:intron | 25.0% |
| ! | GAAAAGCCAATAGAATAAAA+GGG | - | chr3_2:2721652-2721671 | None:intergenic | 25.0% |
| ! | TGAAAAGCCAATAGAATAAA+AGG | - | chr3_2:2721653-2721672 | None:intergenic | 25.0% |
| ! | CAAGTTGTCAAGATTATAAA+GGG | - | chr3_2:2721681-2721700 | None:intergenic | 25.0% |
| !! | TCAAGTTGTCAAGATTATAA+AGG | - | chr3_2:2721682-2721701 | None:intergenic | 25.0% |
| !! | TTGATTTTTATATGTATGGC+AGG | + | chr3_2:2721698-2721717 | Msa0391220:intron | 25.0% |
| ! | TTAGAATTAAACATCCTACT+TGG | - | chr3_2:2721802-2721821 | None:intergenic | 25.0% |
| !! | CATTTTATCGAAAAACTCAT+AGG | - | chr3_2:2721878-2721897 | None:intergenic | 25.0% |
| !! | TTTGTCAATTAAAAGTGCAA+CGG | - | chr3_2:2722489-2722508 | None:intergenic | 25.0% |
| !!! | AATTTTAGAAACTGACATAC+GGG | + | chr3_2:2722574-2722593 | Msa0391220:intron | 25.0% |
| ! | GAAGTTTGTAAAAAGTAGAA+GGG | - | chr3_2:2722647-2722666 | None:intergenic | 25.0% |
| ! | AGAAGTTTGTAAAAAGTAGA+AGG | - | chr3_2:2722648-2722667 | None:intergenic | 25.0% |
| ! | CTAATAAATTGTAGTATCTG+AGG | - | chr3_2:2722682-2722701 | None:intergenic | 25.0% |
| !! | AGTTTAAAGTCTTAAACTGA+AGG | + | chr3_2:2722700-2722719 | Msa0391220:intron | 25.0% |
| !! | GTTTAAAGTCTTAAACTGAA+GGG | + | chr3_2:2722701-2722720 | Msa0391220:intron | 25.0% |
| !!! | ATCCTATTGTTGTTAACTTT+TGG | + | chr3_2:2722759-2722778 | Msa0391220:intron | 25.0% |
| !! | AATTTGCTTTCCAAGAAAAT+AGG | + | chr3_2:2722858-2722877 | Msa0391220:intron | 25.0% |
| ! | ATTTGCTTTCCAAGAAAATA+GGG | + | chr3_2:2722859-2722878 | Msa0391220:intron | 25.0% |
| ! | TGATTAATTGTGTTTAGTGA+AGG | - | chr3_2:2723069-2723088 | None:intergenic | 25.0% |
| !! | ATGAAAATGTGTAGTTGTTT+TGG | + | chr3_2:2723177-2723196 | Msa0391220:intron | 25.0% |
| ! | TTGTCTATGCTTATAGAATT+TGG | - | chr3_2:2723250-2723269 | None:intergenic | 25.0% |
| ! | TAATTTCCACAAAACTTATC+GGG | + | chr3_2:2723497-2723516 | Msa0391220:intron | 25.0% |
| ! | ACATTTAGTCAAAACAAGTT+AGG | + | chr3_2:2723655-2723674 | Msa0391220:intron | 25.0% |
| ! | TCATATTGTCTATATATAGG+GGG | - | chr3_2:2724071-2724090 | None:intergenic | 25.0% |
| !!! | TGAAAGTCGTGATTTTTTAT+GGG | - | chr3_2:2724124-2724143 | None:intergenic | 25.0% |
| !!! | TTGAAAGTCGTGATTTTTTA+TGG | - | chr3_2:2724125-2724144 | None:intergenic | 25.0% |
| !! | TCCTTTTTATGTGATTTCTT+TGG | + | chr3_2:2724217-2724236 | Msa0391220:intron | 25.0% |
| ! | ACCAAAGAAATCACATAAAA+AGG | - | chr3_2:2724221-2724240 | None:intergenic | 25.0% |
| !!! | TTTTGTTCGGATCTTTATTT+TGG | + | chr3_2:2724333-2724352 | Msa0391220:intron | 25.0% |
| !! | ATTTCTTCTTTTCTCTTGAT+TGG | - | chr3_2:2724368-2724387 | None:intergenic | 25.0% |
| ! | AAAGTGATTATATTTGAACG+TGG | - | chr3_2:2724433-2724452 | None:intergenic | 25.0% |
| !! | GAAAAAAATTGTGAGTATTG+AGG | - | chr3_2:2724482-2724501 | None:intergenic | 25.0% |
| ! | ACTCAAAAAACAAAAATCAC+AGG | - | chr3_2:2724748-2724767 | None:intergenic | 25.0% |
| !!! | TCCCTTTTAGTTAAAGAAAA+AGG | - | chr3_2:2724780-2724799 | None:intergenic | 25.0% |
| ! | CAACTTTCCACTTAAAAATA+AGG | - | chr3_2:2725081-2725100 | None:intergenic | 25.0% |
| !!! | TGAAACATGTTTTTTTTAGG+AGG | - | chr3_2:2725173-2725192 | None:intergenic | 25.0% |
| ! | TGGTCAAAAATTAAGACAAA+GGG | - | chr3_2:2725257-2725276 | None:intergenic | 25.0% |
| ! | TTGGTCAAAAATTAAGACAA+AGG | - | chr3_2:2725258-2725277 | None:intergenic | 25.0% |
| !!! | TATAGGTTTTGGTACAAAAT+TGG | + | chr3_2:2725551-2725570 | Msa0391220:intron | 25.0% |
| ! | TTATGGAGAAAAAAAAGTAG+GGG | + | chr3_2:2725864-2725883 | Msa0391220:intron | 25.0% |
| ! | ATCTAACCCGATAAAAAATT+AGG | + | chr3_2:2725893-2725912 | Msa0391220:intron | 25.0% |
| ! | TCTAACCCGATAAAAAATTA+GGG | + | chr3_2:2725894-2725913 | Msa0391220:intron | 25.0% |
| !!! | TATGTCCCTAATTTTTTATC+GGG | - | chr3_2:2725902-2725921 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTAGCAATTCTCA+TGG | - | chr3_2:2726271-2726290 | None:intergenic | 25.0% |
| ! | AAAAAATGGGAATACAATCT+TGG | - | chr3_2:2726346-2726365 | None:intergenic | 25.0% |
| ! | CGGTATTAATCATATTTATG+TGG | - | chr3_2:2726424-2726443 | None:intergenic | 25.0% |
| !!! | GAAAAAATTCCTATTTTGAG+AGG | - | chr3_2:2726504-2726523 | None:intergenic | 25.0% |
| ! | TTCTACTGAAAAATCAAACT+CGG | + | chr3_2:2726589-2726608 | Msa0391220:intron | 25.0% |
| ! | TAGTGAGTTCCAAATTAATT+AGG | - | chr3_2:2726619-2726638 | None:intergenic | 25.0% |
| !! | AACAAGAAATTTTGTTCATG+TGG | + | chr3_2:2727147-2727166 | Msa0391220:intron | 25.0% |
| !!! | TAATCTTAAATTAAGTTGGG+AGG | - | chr3_2:2727257-2727276 | None:intergenic | 25.0% |
| ! | ACTCATTCAAAATCTCAAAT+TGG | + | chr3_2:2727525-2727544 | Msa0391220:intron | 25.0% |
| !! | GTTCATAATTTTCTTACTAC+CGG | + | chr3_2:2727640-2727659 | Msa0391220:intron | 25.0% |
| !! | TTCATAATTTTCTTACTACC+GGG | + | chr3_2:2727641-2727660 | Msa0391220:intron | 25.0% |
| ! | AATGTAATATCATTCTCACT+TGG | - | chr3_2:2727947-2727966 | None:intergenic | 25.0% |
| !! | ACATTTTCACCGAATATTTA+AGG | + | chr3_2:2727962-2727981 | Msa0391220:intron | 25.0% |
| ! | TTCAACATTGAATAAAAGAG+TGG | - | chr3_2:2728030-2728049 | None:intergenic | 25.0% |
| ! | GATTAGTGATTAACTAGTAT+GGG | - | chr3_2:2728131-2728150 | None:intergenic | 25.0% |
| ! | TGATTAGTGATTAACTAGTA+TGG | - | chr3_2:2728132-2728151 | None:intergenic | 25.0% |
| ! | CTAATCACAATCATTTCATT+TGG | + | chr3_2:2728145-2728164 | Msa0391220:intron | 25.0% |
| ! | GACATAAATAGGCAATTATT+TGG | + | chr3_2:2728199-2728218 | Msa0391220:intron | 25.0% |
| ! | ACATAAATACTCATTGGATT+AGG | + | chr3_2:2728391-2728410 | Msa0391220:intron | 25.0% |
| ! | ACTGTAAATTCTGTAATCAA+TGG | - | chr3_2:2728640-2728659 | None:intergenic | 25.0% |
| ! | TGATCGTAACAAAAATACAA+AGG | - | chr3_2:2728827-2728846 | None:intergenic | 25.0% |
| !! | AGAATTTAGAATTGTGCATT+TGG | + | chr3_2:2728846-2728865 | Msa0391220:intron | 25.0% |
| ! | TAAAAATGGAATATCAAAGC+GGG | + | chr3_2:2728938-2728957 | Msa0391220:CDS | 25.0% |
| !! | GAAATTGATTCTATTCAACA+GGG | + | chr3_2:2729011-2729030 | Msa0391220:CDS | 25.0% |
| AGTTACATCTAGTGTAACAT+GGG | - | chr3_2:2720136-2720155 | None:intergenic | 30.0% | |
| ATTACATCCAAAAGCAATTC+AGG | - | chr3_2:2720201-2720220 | None:intergenic | 30.0% | |
| ATTTCCTATTTCATTGAAGC+AGG | + | chr3_2:2720353-2720372 | Msa0391220:CDS | 30.0% | |
| ATTACCTGCTTCAATGAAAT+AGG | - | chr3_2:2720360-2720379 | None:intergenic | 30.0% | |
| TTTGTATCAAACCAGAAAGT+GGG | - | chr3_2:2720393-2720412 | None:intergenic | 30.0% | |
| ATTTGTATCAAACCAGAAAG+TGG | - | chr3_2:2720394-2720413 | None:intergenic | 30.0% | |
| CATTGTATCAGATAATCACT+GGG | - | chr3_2:2720475-2720494 | None:intergenic | 30.0% | |
| ! | TGATACAATGCTTTATTAGG+AGG | + | chr3_2:2720485-2720504 | Msa0391220:CDS | 30.0% |
| TCAGCAATGAAATACTTACA+TGG | - | chr3_2:2720553-2720572 | None:intergenic | 30.0% | |
| GTATCATATACTATATGCAG+TGG | - | chr3_2:2720935-2720954 | None:intergenic | 30.0% | |
| !!! | ATGTGGATATTTGTTTTTGG+TGG | - | chr3_2:2720974-2720993 | None:intergenic | 30.0% |
| ACAAGTAAAACCCATACATT+TGG | - | chr3_2:2721161-2721180 | None:intergenic | 30.0% | |
| ! | CTTTTTGCTTAATGAGTAGA+CGG | + | chr3_2:2721288-2721307 | Msa0391220:intron | 30.0% |
| !! | TGTATTTAAGCAGCTTGTTT+TGG | + | chr3_2:2721458-2721477 | Msa0391220:intron | 30.0% |
| TATTAGCTGCCAAAAAGATA+AGG | + | chr3_2:2721524-2721543 | Msa0391220:CDS | 30.0% | |
| ! | TTTACCAACATATTTGTTGC+TGG | - | chr3_2:2721593-2721612 | None:intergenic | 30.0% |
| ! | ACAAATATGTTGGTAAAGTC+AGG | + | chr3_2:2721596-2721615 | Msa0391220:intron | 30.0% |
| TTGTCAAGATTATAAAGGGA+TGG | - | chr3_2:2721677-2721696 | None:intergenic | 30.0% | |
| ACTGTCGTATATAGTGAAAT+CGG | - | chr3_2:2721740-2721759 | None:intergenic | 30.0% | |
| ATCGAAAAACTCATAGGAAA+TGG | - | chr3_2:2721872-2721891 | None:intergenic | 30.0% | |
| TAACATTGTTACCACTATTC+AGG | + | chr3_2:2721927-2721946 | Msa0391220:intron | 30.0% | |
| TGATCAGAAATGTAGTTTGA+GGG | - | chr3_2:2722373-2722392 | None:intergenic | 30.0% | |
| ATGATCAGAAATGTAGTTTG+AGG | - | chr3_2:2722374-2722393 | None:intergenic | 30.0% | |
| GTCCAAAAGTTAACAACAAT+AGG | - | chr3_2:2722764-2722783 | None:intergenic | 30.0% | |
| AGTTTATCCGAATCGTTAAT+TGG | + | chr3_2:2722896-2722915 | Msa0391220:intron | 30.0% | |
| ACAACAACCAATTAACGATT+CGG | - | chr3_2:2722906-2722925 | None:intergenic | 30.0% | |
| GGCATGATATGTTAAATATG+TGG | + | chr3_2:2722988-2723007 | Msa0391220:intron | 30.0% | |
| TGTTAAATATGTGGTTAACG+CGG | + | chr3_2:2722997-2723016 | Msa0391220:intron | 30.0% | |
| AGAATTTGGAAGAACTCAAT+TGG | - | chr3_2:2723236-2723255 | None:intergenic | 30.0% | |
| !! | CATTTTGTTTCAAGTACTCA+TGG | + | chr3_2:2723312-2723331 | Msa0391220:intron | 30.0% |
| TATGATCTGATCAACTCTAA+GGG | - | chr3_2:2723479-2723498 | None:intergenic | 30.0% | |
| TTATGATCTGATCAACTCTA+AGG | - | chr3_2:2723480-2723499 | None:intergenic | 30.0% | |
| TCACGATAGATTTATTTCAG+AGG | + | chr3_2:2723559-2723578 | Msa0391220:intron | 30.0% | |
| !!! | GATACATTTTGATTGGTTGA+TGG | - | chr3_2:2723956-2723975 | None:intergenic | 30.0% |
| !! | GAGTCAAGATACATTTTGAT+TGG | - | chr3_2:2723963-2723982 | None:intergenic | 30.0% |
| !!! | CATGATCAATTTTGATTGGT+TGG | - | chr3_2:2724038-2724057 | None:intergenic | 30.0% |
| ATTTCTTCTTCTCTATTGAC+TGG | - | chr3_2:2724637-2724656 | None:intergenic | 30.0% | |
| TGATTTCTCAACCAATCAAA+TGG | + | chr3_2:2725222-2725241 | Msa0391220:intron | 30.0% | |
| ! | GTGTTTTTCCATGATGTTAT+AGG | + | chr3_2:2725534-2725553 | Msa0391220:intron | 30.0% |
| ! | TTCCATGATGTTATAGGTTT+TGG | + | chr3_2:2725540-2725559 | Msa0391220:intron | 30.0% |
| TACCAAAACCTATAACATCA+TGG | - | chr3_2:2725545-2725564 | None:intergenic | 30.0% | |
| TACAACAATGCCTTAAACTT+TGG | + | chr3_2:2726108-2726127 | Msa0391220:intron | 30.0% | |
| TCTACTGAAAAATCAAACTC+GGG | + | chr3_2:2726590-2726609 | Msa0391220:intron | 30.0% | |
| CACATGCATATCAATTTCAA+TGG | - | chr3_2:2726773-2726792 | None:intergenic | 30.0% | |
| TGGTTAAATTCACACAATGA+GGG | - | chr3_2:2726815-2726834 | None:intergenic | 30.0% | |
| !! | TCATGAGTGTTGTATGTTTT+AGG | + | chr3_2:2726977-2726996 | Msa0391220:intron | 30.0% |
| GAAAACATGAGTTTGATTCT+AGG | + | chr3_2:2727202-2727221 | Msa0391220:intron | 30.0% | |
| ! | TTATTATGGTGTTAACCCTA+TGG | - | chr3_2:2727303-2727322 | None:intergenic | 30.0% |
| GTTAACACCATAATAAACAG+TGG | + | chr3_2:2727307-2727326 | Msa0391220:intron | 30.0% | |
| ! | TCATAATTTTCTTACTACCG+GGG | + | chr3_2:2727642-2727661 | Msa0391220:intron | 30.0% |
| TAAACTAAATGTATGATCCC+CGG | - | chr3_2:2727662-2727681 | None:intergenic | 30.0% | |
| ! | TAAGATTTAAGGTGAAGATG+TGG | - | chr3_2:2727729-2727748 | None:intergenic | 30.0% |
| AACATTGAATAAAAGAGTGG+AGG | - | chr3_2:2728027-2728046 | None:intergenic | 30.0% | |
| GTTATGCAGTTGACATAAAT+AGG | + | chr3_2:2728188-2728207 | Msa0391220:intron | 30.0% | |
| AATTATTTGGGAGAGATCTT+GGG | + | chr3_2:2728212-2728231 | Msa0391220:intron | 30.0% | |
| !!! | GTGCAGAATTTTAGTTTTGT+AGG | + | chr3_2:2728316-2728335 | Msa0391220:intron | 30.0% |
| TGAAGCACATAAATACTCAT+TGG | + | chr3_2:2728385-2728404 | Msa0391220:intron | 30.0% | |
| ! | ACCAAATGGTAGTTCAATTT+TGG | + | chr3_2:2728546-2728565 | Msa0391220:intron | 30.0% |
| ! | CCAAATGGTAGTTCAATTTT+GGG | + | chr3_2:2728547-2728566 | Msa0391220:intron | 30.0% |
| ! | CAAATGGTAGTTCAATTTTG+GGG | + | chr3_2:2728548-2728567 | Msa0391220:intron | 30.0% |
| ! | AAATGGTAGTTCAATTTTGG+GGG | + | chr3_2:2728549-2728568 | Msa0391220:intron | 30.0% |
| ! | CTAAAATGAGCAACTCATTT+TGG | - | chr3_2:2728670-2728689 | None:intergenic | 30.0% |
| TTAGAATTGTGCATTTGGAT+TGG | + | chr3_2:2728851-2728870 | Msa0391220:intron | 30.0% | |
| AAAAATGGAATATCAAAGCG+GGG | + | chr3_2:2728939-2728958 | Msa0391220:CDS | 30.0% | |
| ! | GGAAATTGATTCTATTCAAC+AGG | + | chr3_2:2729010-2729029 | Msa0391220:CDS | 30.0% |
| ATTTCCTATTTCATTGAAGC+AGG | + | chr3_2:2720353-2720372 | Msa0391220:CDS | 30.0% | |
| ATTACCTGCTTCAATGAAAT+AGG | - | chr3_2:2720360-2720379 | None:intergenic | 30.0% | |
| TAAATTATTCTCCCACTTTC+TGG | + | chr3_2:2729234-2729253 | Msa0391220:CDS | 30.0% | |
| ! | AAGGGCATGAAAAATGAACT+AGG | + | chr3_2:2720060-2720079 | Msa0391220:CDS | 35.0% |
| GAGTTACATCTAGTGTAACA+TGG | - | chr3_2:2720137-2720156 | None:intergenic | 35.0% | |
| CTTGACAATCTCTAATGTGA+TGG | - | chr3_2:2720307-2720326 | None:intergenic | 35.0% | |
| TGAATTATTCTCCCACTTTC+TGG | + | chr3_2:2720379-2720398 | Msa0391220:intron | 35.0% | |
| GCATTGTATCAGATAATCAC+TGG | - | chr3_2:2720476-2720495 | None:intergenic | 35.0% | |
| CATTGTCTTAGGAAAAGAGA+TGG | - | chr3_2:2720582-2720601 | None:intergenic | 35.0% | |
| ! | ACTTACTTGCCCTAAGTTTT+TGG | + | chr3_2:2720675-2720694 | Msa0391220:intron | 35.0% |
| ! | CTTACTTGCCCTAAGTTTTT+GGG | + | chr3_2:2720676-2720695 | Msa0391220:intron | 35.0% |
| !!! | CAAGATAGCTGATTTTGGTT+TGG | - | chr3_2:2720851-2720870 | None:intergenic | 35.0% |
| CATATACTATATGCAGTGGA+GGG | - | chr3_2:2720931-2720950 | None:intergenic | 35.0% | |
| TCATATACTATATGCAGTGG+AGG | - | chr3_2:2720932-2720951 | None:intergenic | 35.0% | |
| TTACTTACCTTTCTCATCCT+TGG | + | chr3_2:2721060-2721079 | Msa0391220:intron | 35.0% | |
| TAAAGATCCAAGGATGAGAA+AGG | - | chr3_2:2721070-2721089 | None:intergenic | 35.0% | |
| GTTACTTGCTCCAAATGTAT+GGG | + | chr3_2:2721148-2721167 | Msa0391220:intron | 35.0% | |
| CATATATGAACCAGAGCAAA+CGG | - | chr3_2:2721256-2721275 | None:intergenic | 35.0% | |
| !!! | TTAAGCAGCTTGTTTTGGTT+TGG | + | chr3_2:2721463-2721482 | Msa0391220:intron | 35.0% |
| ! | AAGATCGGACCTTATCTTTT+TGG | - | chr3_2:2721536-2721555 | None:intergenic | 35.0% |
| ! | AACCAAATTTTCGACCAAGT+AGG | + | chr3_2:2721785-2721804 | Msa0391220:CDS | 35.0% |
| ATCCTACTTGGTCGAAAATT+TGG | - | chr3_2:2721790-2721809 | None:intergenic | 35.0% | |
| ATGATGCAGTACATTCTTCT+TGG | - | chr3_2:2721901-2721920 | None:intergenic | 35.0% | |
| ATTGTTACCACTATTCAGGA+AGG | + | chr3_2:2721931-2721950 | Msa0391220:intron | 35.0% | |
| TTGTTACCACTATTCAGGAA+GGG | + | chr3_2:2721932-2721951 | Msa0391220:intron | 35.0% | |
| TTAGGTAACAATGTTGGAGA+CGG | - | chr3_2:2721967-2721986 | None:intergenic | 35.0% | |
| GCAGAGTATGAATTTGTCAT+TGG | - | chr3_2:2722039-2722058 | None:intergenic | 35.0% | |
| TCAAAAGCAAGGATTGCATA+AGG | + | chr3_2:2722112-2722131 | Msa0391220:CDS | 35.0% | |
| CAAAAGCAAGGATTGCATAA+GGG | + | chr3_2:2722113-2722132 | Msa0391220:CDS | 35.0% | |
| ! | TGTTGGTGTTTAGACTTCAT+GGG | + | chr3_2:2722150-2722169 | Msa0391220:CDS | 35.0% |
| TTCTACCGGAGAAACATTAT+GGG | - | chr3_2:2722235-2722254 | None:intergenic | 35.0% | |
| TTGAGTTCATCTTTCACATG+TGG | - | chr3_2:2722840-2722859 | None:intergenic | 35.0% | |
| ! | AACACTAGTCCCTATTTTCT+TGG | - | chr3_2:2722871-2722890 | None:intergenic | 35.0% |
| ATCGTTAATTGGTTGTTGTC+TGG | + | chr3_2:2722907-2722926 | Msa0391220:intron | 35.0% | |
| ! | TGGTTTTCCTAGACTATCAA+TGG | + | chr3_2:2723332-2723351 | Msa0391220:intron | 35.0% |
| ! | AAGCTTACCATTGATAGTCT+AGG | - | chr3_2:2723342-2723361 | None:intergenic | 35.0% |
| ! | GTATTTGGCAAAGTGTTATC+AGG | - | chr3_2:2723449-2723468 | None:intergenic | 35.0% |
| TATGTTATTATGCGTCTCGT+GGG | - | chr3_2:2723593-2723612 | None:intergenic | 35.0% | |
| GAGACGCATAATAACATAGT+CGG | + | chr3_2:2723595-2723614 | Msa0391220:intron | 35.0% | |
| AGACGCATAATAACATAGTC+GGG | + | chr3_2:2723596-2723615 | Msa0391220:intron | 35.0% | |
| ! | TTTTGAGCAAACACTGAAAG+TGG | + | chr3_2:2723760-2723779 | Msa0391220:intron | 35.0% |
| AAACACTGAAAGTGGAATGA+TGG | + | chr3_2:2723768-2723787 | Msa0391220:intron | 35.0% | |
| TAAAGATTAGAGTGATCACG+TGG | - | chr3_2:2723845-2723864 | None:intergenic | 35.0% | |
| ! | TCTTTGAGCAAAAGTACATG+TGG | + | chr3_2:2723896-2723915 | Msa0391220:intron | 35.0% |
| !!! | TGATTTTTTATGGGAGGAAG+AGG | - | chr3_2:2724115-2724134 | None:intergenic | 35.0% |
| !!! | AAGTCGTGATTTTTTATGGG+AGG | - | chr3_2:2724121-2724140 | None:intergenic | 35.0% |
| !! | TTGCTACTTTATGCTTGAGA+TGG | + | chr3_2:2724608-2724627 | Msa0391220:intron | 35.0% |
| TCTTTAACTAAAAGGGAGCA+AGG | + | chr3_2:2724783-2724802 | Msa0391220:intron | 35.0% | |
| TGTTATGGTTGAAAGTTGAG+TGG | - | chr3_2:2725397-2725416 | None:intergenic | 35.0% | |
| TTCAACCATAACATAGCATG+TGG | + | chr3_2:2725404-2725423 | Msa0391220:intron | 35.0% | |
| ATCCAAAAAAAGAGCCAACA+CGG | + | chr3_2:2725928-2725947 | Msa0391220:intron | 35.0% | |
| ATGAATAGAAAAGACCGTGT+TGG | - | chr3_2:2725945-2725964 | None:intergenic | 35.0% | |
| GTAAAGGACTCTTTGTATAC+CGG | + | chr3_2:2726548-2726567 | Msa0391220:intron | 35.0% | |
| ACAATCTTTCGATCAAACTC+CGG | - | chr3_2:2726570-2726589 | None:intergenic | 35.0% | |
| CTCGGGTTTCCTAATTAATT+TGG | + | chr3_2:2726607-2726626 | Msa0391220:intron | 35.0% | |
| GTAATGTGATTGAACTCAAG+TGG | - | chr3_2:2726643-2726662 | None:intergenic | 35.0% | |
| ACAGTCCTATAATTGCAACT+CGG | + | chr3_2:2726738-2726757 | Msa0391220:intron | 35.0% | |
| GGTTAAATTCACACAATGAG+GGG | - | chr3_2:2726814-2726833 | None:intergenic | 35.0% | |
| GTGGTTAAATTCACACAATG+AGG | - | chr3_2:2726816-2726835 | None:intergenic | 35.0% | |
| CATTGTGTGAATTTAACCAC+TGG | + | chr3_2:2726816-2726835 | Msa0391220:intron | 35.0% | |
| !!! | TTTTTTCTCAAGTACTCCAG+TGG | - | chr3_2:2726835-2726854 | None:intergenic | 35.0% |
| CCATAATAATTCGTCGTTGA+TGG | - | chr3_2:2727183-2727202 | None:intergenic | 35.0% | |
| CCATCAACGACGAATTATTA+TGG | + | chr3_2:2727180-2727199 | Msa0391220:intron | 35.0% | |
| AACATGAGTTTGATTCTAGG+TGG | + | chr3_2:2727205-2727224 | Msa0391220:intron | 35.0% | |
| ATTCTAGGTGGAACAGTTAA+TGG | + | chr3_2:2727217-2727236 | Msa0391220:intron | 35.0% | |
| !! | CTATGGCTTTAAAGGTAAAG+GGG | - | chr3_2:2727286-2727305 | None:intergenic | 35.0% |
| !! | CCTATGGCTTTAAAGGTAAA+GGG | - | chr3_2:2727287-2727306 | None:intergenic | 35.0% |
| !! | CCTTTACCTTTAAAGCCATA+GGG | + | chr3_2:2727285-2727304 | Msa0391220:intron | 35.0% |
| !! | TGTTAACCCTATGGCTTTAA+AGG | - | chr3_2:2727294-2727313 | None:intergenic | 35.0% |
| AACACCATAATAAACAGTGG+TGG | + | chr3_2:2727310-2727329 | Msa0391220:intron | 35.0% | |
| ACACCATAATAAACAGTGGT+GGG | + | chr3_2:2727311-2727330 | Msa0391220:intron | 35.0% | |
| ! | TGGTGTCAATATCACTTATG+TGG | - | chr3_2:2727709-2727728 | None:intergenic | 35.0% |
| TTACGACCGTTGGAATTTAT+GGG | + | chr3_2:2727874-2727893 | Msa0391220:intron | 35.0% | |
| CAATTATTTGGGAGAGATCT+TGG | + | chr3_2:2728211-2728230 | Msa0391220:intron | 35.0% | |
| CAATTCTCACTCAAACATCT+TGG | + | chr3_2:2728245-2728264 | Msa0391220:intron | 35.0% | |
| ATAATTCAATCGGTGTGTGT+CGG | - | chr3_2:2728450-2728469 | None:intergenic | 35.0% | |
| AAGATGGGTATATGACCAAA+TGG | + | chr3_2:2728532-2728551 | Msa0391220:intron | 35.0% | |
| CCCAAAATTGAACTACCATT+TGG | - | chr3_2:2728550-2728569 | None:intergenic | 35.0% | |
| ! | AAATGAGCAACTCATTTTGG+AGG | - | chr3_2:2728667-2728686 | None:intergenic | 35.0% |
| CTGCATAAAATGCATCTGTT+AGG | + | chr3_2:2728758-2728777 | Msa0391220:intron | 35.0% | |
| CATAAAATGCATCTGTTAGG+AGG | + | chr3_2:2728761-2728780 | Msa0391220:intron | 35.0% | |
| ! | AAACATGGCATTGAAAAGCA+TGG | + | chr3_2:2728896-2728915 | Msa0391220:CDS | 35.0% |
| GAACTCAAGGGGATTAAAAA+TGG | + | chr3_2:2728924-2728943 | Msa0391220:CDS | 35.0% | |
| ! | AGAGCGAGAATTTTCTCTAT+CGG | + | chr3_2:2728967-2728986 | Msa0391220:CDS | 35.0% |
| ATTCTATTCAACAGGGACAA+TGG | + | chr3_2:2729018-2729037 | Msa0391220:CDS | 35.0% | |
| TTCTATTCAACAGGGACAAT+GGG | + | chr3_2:2729019-2729038 | Msa0391220:CDS | 35.0% | |
| TCTACCACATGAATTGCTTA+TGG | + | chr3_2:2729046-2729065 | Msa0391220:CDS | 35.0% | |
| ATGTCCATAAGCAATTCATG+TGG | - | chr3_2:2729053-2729072 | None:intergenic | 35.0% | |
| TTGAAGAGAGTGAGAGATAT+TGG | + | chr3_2:2729084-2729103 | Msa0391220:CDS | 35.0% | |
| !! | AGTCTTGATGATCTCTTTTG+TGG | - | chr3_2:2729165-2729184 | None:intergenic | 35.0% |
| AATGTGATCATTCCACATTG+CGG | - | chr3_2:2729191-2729210 | None:intergenic | 35.0% | |
| ! | TTTGGATTAGACCAGAAAGT+GGG | - | chr3_2:2729248-2729267 | None:intergenic | 35.0% |
| ! | ATTTGGATTAGACCAGAAAG+TGG | - | chr3_2:2729249-2729268 | None:intergenic | 35.0% |
| AAGCATAGTCTGCAAACTCA+AGG | + | chr3_2:2720041-2720060 | Msa0391220:CDS | 40.0% | |
| AGCATAGTCTGCAAACTCAA+GGG | + | chr3_2:2720042-2720061 | Msa0391220:CDS | 40.0% | |
| TCCAATTGAACCCATTCAAC+AGG | + | chr3_2:2720155-2720174 | Msa0391220:intron | 40.0% | |
| CCAATTGAACCCATTCAACA+GGG | + | chr3_2:2720156-2720175 | Msa0391220:intron | 40.0% | |
| ! | TCTACCACCTGAATTGCTTT+TGG | + | chr3_2:2720191-2720210 | Msa0391220:CDS | 40.0% |
| ACATCCAAAAGCAATTCAGG+TGG | - | chr3_2:2720198-2720217 | None:intergenic | 40.0% | |
| ! | TGCTTTTGGATGTAATCCGT+AGG | + | chr3_2:2720205-2720224 | Msa0391220:CDS | 40.0% |
| ! | GCTTTTGGATGTAATCCGTA+GGG | + | chr3_2:2720206-2720225 | Msa0391220:CDS | 40.0% |
| TTGAAGAGAGTGAGACATCT+TGG | + | chr3_2:2720229-2720248 | Msa0391220:CDS | 40.0% | |
| CATTGTTGTCTGTTGTGCTT+CGG | + | chr3_2:2720263-2720282 | Msa0391220:CDS | 40.0% | |
| TATCAGATAATCACTGGGAC+CGG | - | chr3_2:2720470-2720489 | None:intergenic | 40.0% | |
| TCTACATTCCTGCTGTACTT+AGG | + | chr3_2:2720520-2720539 | Msa0391220:CDS | 40.0% | |
| ATTCCTGCTGTACTTAGGTT+TGG | + | chr3_2:2720525-2720544 | Msa0391220:CDS | 40.0% | |
| !! | TTTGGTTTGGCTAGTGAGTT+AGG | - | chr3_2:2720838-2720857 | None:intergenic | 40.0% |
| GGTTACTTGCTCCAAATGTA+TGG | + | chr3_2:2721147-2721166 | Msa0391220:intron | 40.0% | |
| TGCCAAGGATATGACAAGAT+CGG | - | chr3_2:2721551-2721570 | None:intergenic | 40.0% | |
| ACAAAAATCGTCTGTTGCCA+AGG | - | chr3_2:2721566-2721585 | None:intergenic | 40.0% | |
| CAAGCCAGCAACAAATATGT+TGG | + | chr3_2:2721586-2721605 | Msa0391220:intron | 40.0% | |
| TATGGCAGGTCTGATTTCTT+TGG | + | chr3_2:2721712-2721731 | Msa0391220:intron | 40.0% | |
| ! | AGGAAATGGTGCTAACAAGA+TGG | - | chr3_2:2721858-2721877 | None:intergenic | 40.0% |
| TGTTACCACTATTCAGGAAG+GGG | + | chr3_2:2721933-2721952 | Msa0391220:intron | 40.0% | |
| TAGGTAACAATGTTGGAGAC+GGG | - | chr3_2:2721966-2721985 | None:intergenic | 40.0% | |
| !! | GTCATTGGACTTTTTCCCTT+CGG | - | chr3_2:2722024-2722043 | None:intergenic | 40.0% |
| !! | TCCTTGCTTTTGAGCAACAA+GGG | - | chr3_2:2722105-2722124 | None:intergenic | 40.0% |
| !! | ATCCTTGCTTTTGAGCAACA+AGG | - | chr3_2:2722106-2722125 | None:intergenic | 40.0% |
| ! | GTGTTGGTGTTTAGACTTCA+TGG | + | chr3_2:2722149-2722168 | Msa0391220:CDS | 40.0% |
| TCCATCCCATAATGTTTCTC+CGG | + | chr3_2:2722227-2722246 | Msa0391220:CDS | 40.0% | |
| GTTCTACCGGAGAAACATTA+TGG | - | chr3_2:2722236-2722255 | None:intergenic | 40.0% | |
| GTCTTGCAGTTTGGAAAGAT+CGG | + | chr3_2:2722267-2722286 | Msa0391220:CDS | 40.0% | |
| CGGAAAAGACATATTCGTCA+TGG | + | chr3_2:2722287-2722306 | Msa0391220:intron | 40.0% | |
| TAATCGAACACCAAGAACTG+TGG | + | chr3_2:2722435-2722454 | Msa0391220:intron | 40.0% | |
| GCATGATACATCACTGTGAA+AGG | + | chr3_2:2722967-2722986 | Msa0391220:intron | 40.0% | |
| ! | TTTGGCAAAGTGTTATCAGG+TGG | - | chr3_2:2723446-2723465 | None:intergenic | 40.0% |
| TCTAAGGGCTTGTGAGTATT+TGG | - | chr3_2:2723464-2723483 | None:intergenic | 40.0% | |
| !!! | TCGATCGGCTTATTTTGCAT+CGG | + | chr3_2:2723528-2723547 | Msa0391220:intron | 40.0% |
| CTATGTTATTATGCGTCTCG+TGG | - | chr3_2:2723594-2723613 | None:intergenic | 40.0% | |
| CTCAGTCAGAGCTAAATGTT+AGG | + | chr3_2:2723695-2723714 | Msa0391220:intron | 40.0% | |
| CTTTCAGTGCGTCATAGTAA+CGG | - | chr3_2:2723724-2723743 | None:intergenic | 40.0% | |
| TTACTATGACGCACTGAAAG+TGG | + | chr3_2:2723724-2723743 | Msa0391220:intron | 40.0% | |
| !!! | TCGGATCTTTATTTTGGACG+TGG | + | chr3_2:2724339-2724358 | Msa0391220:intron | 40.0% |
| GGTGCATGAATCCATTTGAT+TGG | - | chr3_2:2725236-2725255 | None:intergenic | 40.0% | |
| CATGTCCACATGCTATGTTA+TGG | - | chr3_2:2725412-2725431 | None:intergenic | 40.0% | |
| TCCTATAATTGCAACTCGGT+TGG | + | chr3_2:2726742-2726761 | Msa0391220:intron | 40.0% | |
| TCCAACCGAGTTGCAATTAT+AGG | - | chr3_2:2726746-2726765 | None:intergenic | 40.0% | |
| !! | CCCTTTACCTTTAAAGCCAT+AGG | + | chr3_2:2727284-2727303 | Msa0391220:intron | 40.0% |
| !! | CCCTATGGCTTTAAAGGTAA+AGG | - | chr3_2:2727288-2727307 | None:intergenic | 40.0% |
| ! | AACTCGGTTCGACTTTGTAT+CGG | - | chr3_2:2727851-2727870 | None:intergenic | 40.0% |
| GTTACGACCGTTGGAATTTA+TGG | + | chr3_2:2727873-2727892 | Msa0391220:intron | 40.0% | |
| TACGACCGTTGGAATTTATG+GGG | + | chr3_2:2727875-2727894 | Msa0391220:intron | 40.0% | |
| AGTTCCCCCATAAATTCCAA+CGG | - | chr3_2:2727883-2727902 | None:intergenic | 40.0% | |
| AGGCTGGACAACATATAAGT+TGG | - | chr3_2:2728007-2728026 | None:intergenic | 40.0% | |
| TTGAATAAAAGAGTGGAGGC+TGG | - | chr3_2:2728023-2728042 | None:intergenic | 40.0% | |
| GGTGCTTTCATATATCAGTG+TGG | + | chr3_2:2728166-2728185 | Msa0391220:intron | 40.0% | |
| TTCTCACTCAAACATCTTGG+TGG | + | chr3_2:2728248-2728267 | Msa0391220:intron | 40.0% | |
| TCTCACTCAAACATCTTGGT+GGG | + | chr3_2:2728249-2728268 | Msa0391220:intron | 40.0% | |
| ATGAAGCACAGACTCATACA+CGG | - | chr3_2:2728494-2728513 | None:intergenic | 40.0% | |
| ! | TTGTGTTGCTACAGGAAACA+TGG | + | chr3_2:2728881-2728900 | Msa0391220:CDS | 40.0% |
| ! | ATGGCATTGAAAAGCATGGT+CGG | + | chr3_2:2728900-2728919 | Msa0391220:CDS | 40.0% |
| GTCAAACTCACATCTTGCTT+TGG | + | chr3_2:2728989-2729008 | Msa0391220:CDS | 40.0% | |
| TGCTTATGGACATAATCCGT+AGG | + | chr3_2:2729060-2729079 | Msa0391220:CDS | 40.0% | |
| GCTTATGGACATAATCCGTA+GGG | + | chr3_2:2729061-2729080 | Msa0391220:CDS | 40.0% | |
| ! | TGCTGTTGTCTTTTGTGCTT+CGG | + | chr3_2:2729118-2729137 | Msa0391220:CDS | 40.0% |
| GTGCTTCGGTATGTAAATCA+TGG | + | chr3_2:2729132-2729151 | Msa0391220:CDS | 40.0% | |
| CTTCGGTATGTAAATCATGG+AGG | + | chr3_2:2729135-2729154 | Msa0391220:CDS | 40.0% | |
| !! | CTTGATGATCTCTTTTGTGG+CGG | - | chr3_2:2729162-2729181 | None:intergenic | 40.0% |
| !! | AGAGTGCTGAGATCAAGCAT+AGG | + | chr3_2:2720094-2720113 | Msa0391220:CDS | 45.0% |
| ! | CCCTGTTGAATGGGTTCAAT+TGG | - | chr3_2:2720159-2720178 | None:intergenic | 45.0% |
| TCTCACTCTCTTCAACCCTA+CGG | - | chr3_2:2720224-2720243 | None:intergenic | 45.0% | |
| ACAACAGACAACAATGGCAC+GGG | - | chr3_2:2720259-2720278 | None:intergenic | 45.0% | |
| CACAACAGACAACAATGGCA+CGG | - | chr3_2:2720260-2720279 | None:intergenic | 45.0% | |
| CGAAGCACAACAGACAACAA+TGG | - | chr3_2:2720265-2720284 | None:intergenic | 45.0% | |
| GTGCTTCGGTATGTAAATCG+TGG | + | chr3_2:2720277-2720296 | Msa0391220:CDS | 45.0% | |
| CTTCGGTATGTAAATCGTGG+AGG | + | chr3_2:2720280-2720299 | Msa0391220:CDS | 45.0% | |
| ATCAGATAATCACTGGGACC+GGG | - | chr3_2:2720469-2720488 | None:intergenic | 45.0% | |
| AACCACACTTTCTTGCTGCA+AGG | - | chr3_2:2721200-2721219 | None:intergenic | 45.0% | |
| ! | TTGCAGCAAGAAAGTGTGGT+TGG | + | chr3_2:2721199-2721218 | Msa0391220:intron | 45.0% |
| GTCCGATCTTGTCATATCCT+TGG | + | chr3_2:2721546-2721565 | Msa0391220:intron | 45.0% | |
| CTACATGCTCGAACTCTTCT+TGG | - | chr3_2:2721835-2721854 | None:intergenic | 45.0% | |
| GTTACCACTATTCAGGAAGG+GGG | + | chr3_2:2721934-2721953 | Msa0391220:intron | 45.0% | |
| AGGTAACAATGTTGGAGACG+GGG | - | chr3_2:2721965-2721984 | None:intergenic | 45.0% | |
| !! | TCAGTCCTAGTAGCTCTGAT+GGG | - | chr3_2:2722065-2722084 | None:intergenic | 45.0% |
| ! | TGCTTTTGAGCAACAAGGGT+TGG | - | chr3_2:2722101-2722120 | None:intergenic | 45.0% |
| ACCCTTGTTGCTCAAAAGCA+AGG | + | chr3_2:2722101-2722120 | Msa0391220:CDS | 45.0% | |
| ACCGGAGAAACATTATGGGA+TGG | - | chr3_2:2722231-2722250 | None:intergenic | 45.0% | |
| TTTCTCCGGTAGAACGAGAA+AGG | + | chr3_2:2722241-2722260 | Msa0391220:CDS | 45.0% | |
| TTCTCCGGTAGAACGAGAAA+GGG | + | chr3_2:2722242-2722261 | Msa0391220:CDS | 45.0% | |
| ACTACCCTTTCTCGTTCTAC+CGG | - | chr3_2:2722249-2722268 | None:intergenic | 45.0% | |
| ! | GAAAGGGTAGTCTTGCAGTT+TGG | + | chr3_2:2722258-2722277 | Msa0391220:CDS | 45.0% |
| TCTCAATTGCGTCAAGCAGA+TGG | - | chr3_2:2722349-2722368 | None:intergenic | 45.0% | |
| CATGAACCATAGATCCACTG+CGG | + | chr3_2:2722513-2722532 | Msa0391220:intron | 45.0% | |
| TATGCTTATTCAAGCCGCAG+TGG | - | chr3_2:2722530-2722549 | None:intergenic | 45.0% | |
| TTGTCTGGATATGCCTTACC+AGG | + | chr3_2:2722922-2722941 | Msa0391220:intron | 45.0% | |
| TGTCTGGATATGCCTTACCA+GGG | + | chr3_2:2722923-2722942 | Msa0391220:intron | 45.0% | |
| AAACTAGCAGTCTAGTACCC+TGG | - | chr3_2:2722943-2722962 | None:intergenic | 45.0% | |
| ! | CTGTCTCCCGATAAGTTTTG+TGG | - | chr3_2:2723506-2723525 | None:intergenic | 45.0% |
| CACAAAACTTATCGGGAGAC+AGG | + | chr3_2:2723504-2723523 | Msa0391220:intron | 45.0% | |
| GCATAATAACATAGTCGGGC+CGG | + | chr3_2:2723600-2723619 | Msa0391220:intron | 45.0% | |
| !!! | GACCGTGTTGGCTCTTTTTT+TGG | - | chr3_2:2725933-2725952 | None:intergenic | 45.0% |
| AGGCCCACCACTGTTTATTA+TGG | - | chr3_2:2727317-2727336 | None:intergenic | 45.0% | |
| CCAACGGTCGTAACAAAACT+CGG | - | chr3_2:2727867-2727886 | None:intergenic | 45.0% | |
| ACGACCGTTGGAATTTATGG+GGG | + | chr3_2:2727876-2727895 | Msa0391220:intron | 45.0% | |
| GGAATTTATGGGGGAACTCA+CGG | + | chr3_2:2727885-2727904 | Msa0391220:intron | 45.0% | |
| ! | GATGATTGCTCTAGCTCCAA+TGG | - | chr3_2:2727925-2727944 | None:intergenic | 45.0% |
| ! | ACTCATTGGATTAGGTGTCC+CGG | + | chr3_2:2728399-2728418 | Msa0391220:intron | 45.0% |
| !! | GAGCAACTCATTTTGGAGGT+TGG | - | chr3_2:2728663-2728682 | None:intergenic | 45.0% |
| !! | GTGCAGTTTTGTGTTGCTAC+AGG | + | chr3_2:2728873-2728892 | Msa0391220:intron | 45.0% |
| TCTCACTCTCTTCAACCCTA+CGG | - | chr3_2:2720224-2720243 | None:intergenic | 45.0% | |
| ATCAAGACTCTTCCGCAATG+TGG | + | chr3_2:2729176-2729195 | Msa0391220:CDS | 45.0% | |
| !!! | ATATTTATTTATTTTCATTT+AGG | + | chr3_2:2721374-2721393 | Msa0391220:intron | 5.0% |
| !!! | AAATAAATATGTAATTTTTT+TGG | - | chr3_2:2723399-2723418 | None:intergenic | 5.0% |
| !! | TAATTTAATAATCTTTAATT+AGG | - | chr3_2:2724931-2724950 | None:intergenic | 5.0% |
| !! | TAAGATAAAAATAAAATTTA+TGG | + | chr3_2:2725847-2725866 | Msa0391220:intron | 5.0% |
| ! | TTTTGTGTTGCGACGCAGTG+TGG | + | chr3_2:2720003-2720022 | Msa0391220:CDS | 50.0% |
| AGATCAAGCATAGGCTCCGT+CGG | + | chr3_2:2720103-2720122 | Msa0391220:CDS | 50.0% | |
| TAACATGGGACTTCGTCCGA+CGG | - | chr3_2:2720122-2720141 | None:intergenic | 50.0% | |
| AACCCATTCAACAGGGACAG+TGG | + | chr3_2:2720163-2720182 | Msa0391220:intron | 50.0% | |
| ACCCATTCAACAGGGACAGT+GGG | + | chr3_2:2720164-2720183 | Msa0391220:intron | 50.0% | |
| GTCAAGACTCCTCAGCAATG+TGG | + | chr3_2:2720321-2720340 | Msa0391220:CDS | 50.0% | |
| GTAAGCGTTCCACATTGCTG+AGG | - | chr3_2:2720333-2720352 | None:intergenic | 50.0% | |
| ! | CTTTATGCGTGTGACTAGCC+CGG | + | chr3_2:2720448-2720467 | Msa0391220:intron | 50.0% |
| GCTCCAAACCTAAGTACAGC+AGG | - | chr3_2:2720531-2720550 | None:intergenic | 50.0% | |
| AGCCTTGCAGCAAGAAAGTG+TGG | + | chr3_2:2721195-2721214 | Msa0391220:intron | 50.0% | |
| CAGAGCAAACGGTTACAAGC+GGG | - | chr3_2:2721245-2721264 | None:intergenic | 50.0% | |
| CCAGAGCAAACGGTTACAAG+CGG | - | chr3_2:2721246-2721265 | None:intergenic | 50.0% | |
| TGAACTGCAGCATCATGTGG+AGG | - | chr3_2:2721766-2721785 | None:intergenic | 50.0% | |
| GGTTGAACTGCAGCATCATG+TGG | - | chr3_2:2721769-2721788 | None:intergenic | 50.0% | |
| GTTTCCCCCTTCCTGAATAG+TGG | - | chr3_2:2721941-2721960 | None:intergenic | 50.0% | |
| !! | GGTGCTGGTGAAGGAGAAAA+AGG | - | chr3_2:2722003-2722022 | None:intergenic | 50.0% |
| !! | CTCAGTCCTAGTAGCTCTGA+TGG | - | chr3_2:2722066-2722085 | None:intergenic | 50.0% |
| CGCAGTGGATCTATGGTTCA+TGG | - | chr3_2:2722515-2722534 | None:intergenic | 50.0% | |
| TTCAAGCCGCAGTGGATCTA+TGG | - | chr3_2:2722522-2722541 | None:intergenic | 50.0% | |
| GGCGTAGCAACACTTCATGT+AGG | + | chr3_2:2722722-2722741 | Msa0391220:intron | 50.0% | |
| AGCAGTCTAGTACCCTGGTA+AGG | - | chr3_2:2722938-2722957 | None:intergenic | 50.0% | |
| TATCGGGAGACAGGATCGAT+CGG | + | chr3_2:2723513-2723532 | Msa0391220:intron | 50.0% | |
| ATGTGTGTGCAGCCTGCTTT+GGG | - | chr3_2:2723639-2723658 | None:intergenic | 50.0% | |
| AATGTGTGTGCAGCCTGCTT+TGG | - | chr3_2:2723640-2723659 | None:intergenic | 50.0% | |
| ! | TTTGTATCGGAAGCGCGAGT+GGG | - | chr3_2:2727838-2727857 | None:intergenic | 50.0% |
| !!! | CCGAGTTTTGTTACGACCGT+TGG | + | chr3_2:2727864-2727883 | Msa0391220:intron | 50.0% |
| ATTTATGGGGGAACTCACGG+TGG | + | chr3_2:2727888-2727907 | Msa0391220:intron | 50.0% | |
| CTTGAATTCTAGCCCGTGCT+TGG | + | chr3_2:2728097-2728116 | Msa0391220:intron | 50.0% | |
| ACACGATAGGTATCCGACAC+CGG | - | chr3_2:2728421-2728440 | None:intergenic | 50.0% | |
| !! | GTGTCGGTGTTAGACACGAT+AGG | - | chr3_2:2728434-2728453 | None:intergenic | 50.0% |
| AAGCATGGTCGGAGAACTCA+AGG | + | chr3_2:2728911-2728930 | Msa0391220:CDS | 50.0% | |
| AGCATGGTCGGAGAACTCAA+GGG | + | chr3_2:2728912-2728931 | Msa0391220:CDS | 50.0% | |
| GCCCACTGTCCCTGTTGAAT+GGG | - | chr3_2:2720168-2720187 | None:intergenic | 55.0% | |
| TGCCCACTGTCCCTGTTGAA+TGG | - | chr3_2:2720169-2720188 | None:intergenic | 55.0% | |
| !! | CGGGCTAGTCACACGCATAA+AGG | - | chr3_2:2720450-2720469 | None:intergenic | 55.0% |
| CCGCTTGTAACCGTTTGCTC+TGG | + | chr3_2:2721243-2721262 | Msa0391220:intron | 55.0% | |
| ! | TTCTCCTTCACCAGCACCGA+AGG | + | chr3_2:2722005-2722024 | Msa0391220:CDS | 55.0% |
| ! | TCTCCTTCACCAGCACCGAA+GGG | + | chr3_2:2722006-2722025 | Msa0391220:CDS | 55.0% |
| !! | TTTCCCTTCGGTGCTGGTGA+AGG | - | chr3_2:2722012-2722031 | None:intergenic | 55.0% |
| !! | GGACTTTTTCCCTTCGGTGC+TGG | - | chr3_2:2722018-2722037 | None:intergenic | 55.0% |
| GCATGCCCATCAGAGCTACT+AGG | + | chr3_2:2722057-2722076 | Msa0391220:CDS | 55.0% | |
| GAGCTACTAGGACTGAGCCA+AGG | + | chr3_2:2722069-2722088 | Msa0391220:CDS | 55.0% | |
| ACAAGGGTTGGATCGAGCCT+TGG | - | chr3_2:2722089-2722108 | None:intergenic | 55.0% | |
| ! | GGGATGAGCAGCGAAAGTGT+TGG | + | chr3_2:2722133-2722152 | Msa0391220:CDS | 55.0% |
| AGGCTTGGAAGGCAGAGAGT+GGG | - | chr3_2:2722323-2722342 | None:intergenic | 55.0% | |
| AAGGCTTGGAAGGCAGAGAG+TGG | - | chr3_2:2722324-2722343 | None:intergenic | 55.0% | |
| TCAAGCAGATGGCGAAGGCT+TGG | - | chr3_2:2722338-2722357 | None:intergenic | 55.0% | |
| TTGCGTCAAGCAGATGGCGA+AGG | - | chr3_2:2722343-2722362 | None:intergenic | 55.0% | |
| CACCAAGAACTGTGGCATGC+AGG | + | chr3_2:2722443-2722462 | Msa0391220:intron | 55.0% | |
| TGCCTGCATGCCACAGTTCT+TGG | - | chr3_2:2722448-2722467 | None:intergenic | 55.0% | |
| TTTGGGCCCATTTCCAGGTC+CGG | - | chr3_2:2723622-2723641 | None:intergenic | 55.0% | |
| ! | CTTTGTATCGGAAGCGCGAG+TGG | - | chr3_2:2727839-2727858 | None:intergenic | 55.0% |
| GGTGGTGTGGATCGATCCAT+TGG | + | chr3_2:2727906-2727925 | Msa0391220:intron | 55.0% | |
| ATTCTAGCCCGTGCTTGGCA+CGG | + | chr3_2:2728102-2728121 | Msa0391220:intron | 55.0% | |
| ! | TGGATTAGGTGTCCCGGTGT+CGG | + | chr3_2:2728405-2728424 | Msa0391220:intron | 55.0% |
| CACGATAGGTATCCGACACC+GGG | - | chr3_2:2728420-2728439 | None:intergenic | 55.0% | |
| GCATGGTCGGAGAACTCAAG+GGG | + | chr3_2:2728913-2728932 | Msa0391220:CDS | 55.0% | |
| AAGACAACAGCAGAACGCGC+AGG | - | chr3_2:2729110-2729129 | None:intergenic | 55.0% | |
| CAGACAACAATGGCACGGGC+AGG | - | chr3_2:2720255-2720274 | None:intergenic | 60.0% | |
| GCAGATGGCGAAGGCTTGGA+AGG | - | chr3_2:2722334-2722353 | None:intergenic | 60.0% | |
| TAACATAGTCGGGCCGGACC+TGG | + | chr3_2:2723606-2723625 | Msa0391220:intron | 60.0% | |
| ! | CCTGCTTTGGGCCCATTTCC+AGG | - | chr3_2:2723627-2723646 | None:intergenic | 60.0% |
| CCTGGAAATGGGCCCAAAGC+AGG | + | chr3_2:2723624-2723643 | Msa0391220:intron | 60.0% | |
| TTCTAGCCCGTGCTTGGCAC+GGG | + | chr3_2:2728103-2728122 | Msa0391220:intron | 60.0% | |
| ATGGGTACCCGTGCCAAGCA+CGG | - | chr3_2:2728113-2728132 | None:intergenic | 60.0% | |
| AGTCGGGCCGGACCTGGAAA+TGG | + | chr3_2:2723612-2723631 | Msa0391220:intron | 65.0% | |
| GTCGGGCCGGACCTGGAAAT+GGG | + | chr3_2:2723613-2723632 | Msa0391220:intron | 65.0% | |
| TGGGGGAACTCACGGTGGTG+TGG | + | chr3_2:2727893-2727912 | Msa0391220:intron | 65.0% | |
| TGGGTACCCGTGCCAAGCAC+GGG | - | chr3_2:2728112-2728131 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 2719979 | 2729271 | 2719979 | ID=Msa0391220;Name=Msa0391220 |
| chr3_2 | mRNA | 2719979 | 2729271 | 2719979 | ID=Msa0391220-mRNA-1;Parent=Msa0391220;Name=Msa0391220-mRNA-1;_AED=0.25;_eAED=0.27;_QI=0|0|0|1|0.42|0.25|8|0|484 |
| chr3_2 | exon | 2719979 | 2720149 | 2719979 | ID=Msa0391220-mRNA-1:exon:806;Parent=Msa0391220-mRNA-1 |
| chr3_2 | exon | 2720177 | 2720374 | 2720177 | ID=Msa0391220-mRNA-1:exon:807;Parent=Msa0391220-mRNA-1 |
| chr3_2 | exon | 2720466 | 2720553 | 2720466 | ID=Msa0391220-mRNA-1:exon:808;Parent=Msa0391220-mRNA-1 |
| chr3_2 | exon | 2721500 | 2721545 | 2721500 | ID=Msa0391220-mRNA-1:exon:809;Parent=Msa0391220-mRNA-1 |
| chr3_2 | exon | 2721720 | 2721933 | 2721720 | ID=Msa0391220-mRNA-1:exon:810;Parent=Msa0391220-mRNA-1 |
| chr3_2 | exon | 2721949 | 2722174 | 2721949 | ID=Msa0391220-mRNA-1:exon:811;Parent=Msa0391220-mRNA-1 |
| chr3_2 | exon | 2722184 | 2722302 | 2722184 | ID=Msa0391220-mRNA-1:exon:812;Parent=Msa0391220-mRNA-1 |
| chr3_2 | exon | 2728879 | 2729271 | 2728879 | ID=Msa0391220-mRNA-1:exon:813;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2719979 | 2720149 | 2719979 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2720177 | 2720374 | 2720177 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2720466 | 2720553 | 2720466 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2721500 | 2721545 | 2721500 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2721720 | 2721933 | 2721720 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2721949 | 2722174 | 2721949 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2722184 | 2722302 | 2722184 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| chr3_2 | CDS | 2728879 | 2729271 | 2728879 | ID=Msa0391220-mRNA-1:cds;Parent=Msa0391220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
