Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0392250 | XP_039688376.1 | 48.343 | 724 | 251 | 17 | 432 | 1080 | 22 | 697 | 0.0 | 584 |
Msa0392250 | XP_039688376.1 | 49.465 | 467 | 175 | 11 | 412 | 821 | 232 | 694 | 7.74e-119 | 392 |
Msa0392250 | XP_039688376.1 | 49.873 | 395 | 146 | 8 | 14 | 387 | 232 | 595 | 2.12e-101 | 346 |
Msa0392250 | XP_039688376.1 | 55.217 | 230 | 84 | 5 | 32 | 243 | 466 | 694 | 5.01e-58 | 225 |
Msa0392250 | XP_039688376.1 | 72.937 | 606 | 87 | 10 | 34 | 579 | 22 | 610 | 0.0 | 847 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0392250 | sp|Q8L3W1|VRN1_ARATH | 38.136 | 118 | 72 | 1 | 417 | 534 | 6 | 122 | 1.48e-20 | 97.8 |
Msa0392250 | sp|Q8L3W1|VRN1_ARATH | 41.489 | 94 | 55 | 0 | 252 | 345 | 6 | 99 | 1.70e-18 | 91.7 |
Msa0392250 | sp|Q8L3W1|VRN1_ARATH | 39.394 | 99 | 56 | 1 | 19 | 113 | 6 | 104 | 1.18e-15 | 83.2 |
Msa0392250 | sp|Q8L3W1|VRN1_ARATH | 37.374 | 99 | 58 | 1 | 598 | 692 | 6 | 104 | 9.38e-15 | 80.5 |
Msa0392250 | sp|Q8L3W1|VRN1_ARATH | 35.227 | 88 | 57 | 0 | 830 | 917 | 6 | 93 | 7.48e-13 | 74.7 |
Msa0392250 | sp|Q8L3W1|VRN1_ARATH | 34.161 | 161 | 85 | 5 | 927 | 1079 | 194 | 341 | 4.41e-11 | 69.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0392250 | G7IYE8 | 44.322 | 273 | 110 | 4 | 807 | 1068 | 2 | 243 | 5.15e-55 | 211 |
Msa0392250 | G7IYE8 | 51.737 | 259 | 89 | 7 | 14 | 237 | 257 | 514 | 2.03e-62 | 232 |
Msa0392250 | G7IYE8 | 57.459 | 181 | 48 | 3 | 400 | 573 | 6 | 164 | 7.10e-51 | 199 |
Msa0392250 | G7IYE8 | 65.363 | 179 | 53 | 3 | 410 | 579 | 252 | 430 | 2.74e-61 | 229 |
Msa0392250 | G7IYE8 | 76.943 | 386 | 73 | 4 | 1 | 370 | 1 | 386 | 0.0 | 585 |
Msa0392250 | G7IYE8 | 77.351 | 521 | 96 | 6 | 581 | 1080 | 4 | 523 | 0.0 | 790 |
Gene ID | Type | Classification |
---|---|---|
Msa0392250 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0392250 | MtrunA17_Chr3g0077411 | 77.351 | 521 | 96 | 6 | 581 | 1080 | 4 | 523 | 0.0 | 790 |
Msa0392250 | MtrunA17_Chr3g0077411 | 76.943 | 386 | 73 | 4 | 1 | 370 | 1 | 386 | 0.0 | 585 |
Msa0392250 | MtrunA17_Chr3g0077411 | 51.737 | 259 | 89 | 7 | 14 | 237 | 257 | 514 | 3.92e-66 | 232 |
Msa0392250 | MtrunA17_Chr3g0077411 | 65.363 | 179 | 53 | 3 | 410 | 579 | 252 | 430 | 5.28e-65 | 229 |
Msa0392250 | MtrunA17_Chr3g0077411 | 44.322 | 273 | 110 | 4 | 807 | 1068 | 2 | 243 | 9.91e-59 | 211 |
Msa0392250 | MtrunA17_Chr3g0077411 | 57.459 | 181 | 48 | 3 | 400 | 573 | 6 | 164 | 1.37e-54 | 199 |
Msa0392250 | MtrunA17_Chr3g0077461 | 82.933 | 375 | 47 | 4 | 34 | 398 | 22 | 389 | 0.0 | 632 |
Msa0392250 | MtrunA17_Chr3g0077461 | 62.893 | 477 | 127 | 10 | 614 | 1072 | 23 | 467 | 0.0 | 556 |
Msa0392250 | MtrunA17_Chr3g0077461 | 45.740 | 446 | 177 | 12 | 432 | 814 | 22 | 465 | 1.24e-102 | 331 |
Msa0392250 | MtrunA17_Chr3g0077461 | 49.789 | 237 | 102 | 5 | 14 | 236 | 232 | 465 | 1.76e-57 | 206 |
Msa0392250 | MtrunA17_Chr3g0077461 | 54.098 | 183 | 72 | 3 | 412 | 585 | 232 | 411 | 2.13e-50 | 185 |
Msa0392250 | MtrunA17_Chr3g0077461 | 42.449 | 245 | 91 | 5 | 845 | 1077 | 22 | 228 | 2.38e-47 | 176 |
Msa0392250 | MtrunA17_Chr3g0077361 | 59.109 | 516 | 162 | 6 | 582 | 1080 | 24 | 507 | 0.0 | 566 |
Msa0392250 | MtrunA17_Chr3g0077361 | 63.144 | 388 | 95 | 6 | 1 | 370 | 20 | 377 | 1.66e-150 | 458 |
Msa0392250 | MtrunA17_Chr3g0077361 | 46.753 | 231 | 112 | 4 | 14 | 243 | 284 | 504 | 2.41e-51 | 189 |
Msa0392250 | MtrunA17_Chr3g0077361 | 55.090 | 167 | 45 | 1 | 412 | 578 | 284 | 420 | 2.44e-48 | 180 |
Msa0392250 | MtrunA17_Chr3g0077361 | 53.514 | 185 | 58 | 3 | 401 | 579 | 24 | 186 | 1.90e-46 | 175 |
Msa0392250 | MtrunA17_Chr4g0009491 | 57.882 | 425 | 152 | 4 | 612 | 1019 | 11 | 425 | 2.93e-149 | 452 |
Msa0392250 | MtrunA17_Chr4g0009491 | 65.230 | 348 | 101 | 5 | 33 | 370 | 11 | 348 | 1.55e-144 | 440 |
Msa0392250 | MtrunA17_Chr4g0009491 | 47.120 | 382 | 134 | 8 | 266 | 579 | 11 | 392 | 4.16e-94 | 306 |
Msa0392250 | MtrunA17_Chr4g0009491 | 43.914 | 419 | 158 | 8 | 431 | 773 | 11 | 428 | 3.46e-91 | 298 |
Msa0392250 | MtrunA17_Chr4g0009491 | 51.707 | 205 | 72 | 3 | 14 | 191 | 220 | 424 | 3.57e-55 | 198 |
Msa0392250 | MtrunA17_Chr4g0009491 | 46.606 | 221 | 77 | 4 | 844 | 1053 | 11 | 201 | 2.67e-48 | 178 |
Msa0392250 | MtrunA17_Chr3g0077381 | 56.651 | 436 | 132 | 7 | 612 | 1019 | 34 | 440 | 4.28e-142 | 434 |
Msa0392250 | MtrunA17_Chr3g0077381 | 63.788 | 359 | 87 | 6 | 33 | 370 | 34 | 370 | 2.69e-139 | 427 |
Msa0392250 | MtrunA17_Chr3g0077381 | 44.111 | 433 | 129 | 10 | 431 | 773 | 34 | 443 | 1.10e-94 | 308 |
Msa0392250 | MtrunA17_Chr3g0077381 | 57.527 | 186 | 74 | 1 | 401 | 581 | 231 | 416 | 5.90e-58 | 207 |
Msa0392250 | MtrunA17_Chr3g0077381 | 51.471 | 204 | 67 | 3 | 14 | 191 | 242 | 439 | 3.06e-53 | 193 |
Msa0392250 | MtrunA17_Chr5g0429931 | 60.324 | 247 | 79 | 2 | 845 | 1080 | 10 | 248 | 7.34e-92 | 293 |
Msa0392250 | MtrunA17_Chr5g0429931 | 55.274 | 237 | 78 | 4 | 34 | 243 | 10 | 245 | 1.63e-70 | 235 |
Msa0392250 | MtrunA17_Chr5g0429931 | 54.237 | 236 | 79 | 4 | 614 | 821 | 11 | 245 | 1.97e-66 | 224 |
Msa0392250 | MtrunA17_Chr5g0429931 | 68.153 | 157 | 45 | 1 | 427 | 578 | 5 | 161 | 4.74e-62 | 211 |
Msa0392250 | MtrunA17_Chr5g0429931 | 65.789 | 114 | 34 | 1 | 262 | 370 | 5 | 118 | 8.13e-44 | 159 |
Msa0392250 | MtrunA17_Chr3g0077451 | 59.036 | 249 | 72 | 4 | 844 | 1080 | 10 | 240 | 1.09e-84 | 274 |
Msa0392250 | MtrunA17_Chr3g0077451 | 79.221 | 154 | 17 | 2 | 431 | 579 | 10 | 153 | 2.26e-73 | 243 |
Msa0392250 | MtrunA17_Chr3g0077451 | 55.459 | 229 | 82 | 5 | 612 | 821 | 10 | 237 | 1.21e-68 | 229 |
Msa0392250 | MtrunA17_Chr3g0077451 | 55.895 | 229 | 82 | 5 | 33 | 243 | 10 | 237 | 2.45e-67 | 226 |
Msa0392250 | MtrunA17_Chr3g0077451 | 62.016 | 129 | 42 | 2 | 266 | 387 | 10 | 138 | 1.34e-44 | 161 |
Msa0392250 | MtrunA17_Chr3g0077431 | 57.991 | 219 | 62 | 4 | 874 | 1080 | 1 | 201 | 3.50e-71 | 235 |
Msa0392250 | MtrunA17_Chr3g0077431 | 78.226 | 124 | 12 | 2 | 461 | 579 | 1 | 114 | 2.33e-55 | 191 |
Msa0392250 | MtrunA17_Chr3g0077431 | 51.759 | 199 | 76 | 5 | 642 | 821 | 1 | 198 | 7.07e-51 | 178 |
Msa0392250 | MtrunA17_Chr3g0077431 | 52.764 | 199 | 75 | 5 | 63 | 243 | 1 | 198 | 9.19e-51 | 177 |
Msa0392250 | MtrunA17_Chr3g0077431 | 58.586 | 99 | 34 | 2 | 296 | 387 | 1 | 99 | 8.41e-29 | 114 |
Msa0392250 | MtrunA17_Chr3g0077421 | 56.944 | 216 | 66 | 3 | 874 | 1078 | 1 | 200 | 3.14e-69 | 230 |
Msa0392250 | MtrunA17_Chr3g0077421 | 79.839 | 124 | 10 | 2 | 461 | 579 | 1 | 114 | 8.68e-57 | 195 |
Msa0392250 | MtrunA17_Chr3g0077421 | 51.000 | 200 | 78 | 5 | 63 | 243 | 1 | 199 | 1.77e-48 | 171 |
Msa0392250 | MtrunA17_Chr3g0077421 | 49.261 | 203 | 82 | 5 | 642 | 824 | 1 | 202 | 5.38e-48 | 169 |
Msa0392250 | MtrunA17_Chr3g0077421 | 57.576 | 99 | 35 | 2 | 296 | 387 | 1 | 99 | 1.17e-26 | 108 |
Msa0392250 | MtrunA17_Chr3g0077441 | 56.944 | 216 | 66 | 3 | 874 | 1078 | 1 | 200 | 3.14e-69 | 230 |
Msa0392250 | MtrunA17_Chr3g0077441 | 79.839 | 124 | 10 | 2 | 461 | 579 | 1 | 114 | 8.68e-57 | 195 |
Msa0392250 | MtrunA17_Chr3g0077441 | 51.000 | 200 | 78 | 5 | 63 | 243 | 1 | 199 | 1.77e-48 | 171 |
Msa0392250 | MtrunA17_Chr3g0077441 | 49.261 | 203 | 82 | 5 | 642 | 824 | 1 | 202 | 5.38e-48 | 169 |
Msa0392250 | MtrunA17_Chr3g0077441 | 57.576 | 99 | 35 | 2 | 296 | 387 | 1 | 99 | 1.17e-26 | 108 |
Msa0392250 | MtrunA17_Chr1g0162441 | 50.000 | 92 | 46 | 0 | 417 | 508 | 7 | 98 | 2.26e-24 | 107 |
Msa0392250 | MtrunA17_Chr1g0162441 | 42.727 | 110 | 63 | 0 | 252 | 361 | 7 | 116 | 7.44e-23 | 102 |
Msa0392250 | MtrunA17_Chr1g0162441 | 42.202 | 109 | 58 | 2 | 19 | 122 | 7 | 115 | 3.16e-20 | 95.1 |
Msa0392250 | MtrunA17_Chr1g0162441 | 42.424 | 99 | 53 | 1 | 598 | 692 | 7 | 105 | 6.62e-20 | 94.0 |
Msa0392250 | MtrunA17_Chr1g0162441 | 36.364 | 88 | 56 | 0 | 830 | 917 | 7 | 94 | 4.88e-16 | 82.0 |
Msa0392250 | MtrunA17_Chr1g0162441 | 34.307 | 137 | 73 | 4 | 945 | 1075 | 268 | 393 | 6.60e-11 | 65.9 |
Msa0392250 | MtrunA17_Chr1g0154071 | 29.961 | 257 | 142 | 8 | 251 | 507 | 27 | 245 | 1.11e-21 | 100 |
Msa0392250 | MtrunA17_Chr1g0154071 | 38.298 | 94 | 57 | 1 | 414 | 507 | 25 | 117 | 3.39e-11 | 67.0 |
Msa0392250 | MtrunA17_Chr3g0131891 | 27.365 | 296 | 161 | 9 | 829 | 1077 | 18 | 306 | 1.94e-21 | 97.1 |
Msa0392250 | MtrunA17_Chr3g0131891 | 30.412 | 194 | 100 | 6 | 416 | 576 | 18 | 209 | 7.41e-18 | 86.3 |
Msa0392250 | MtrunA17_Chr3g0131891 | 28.094 | 299 | 148 | 12 | 12 | 245 | 12 | 308 | 8.92e-18 | 85.9 |
Msa0392250 | MtrunA17_Chr3g0131891 | 23.920 | 301 | 157 | 10 | 591 | 823 | 12 | 308 | 2.93e-16 | 81.6 |
Msa0392250 | MtrunA17_Chr3g0131891 | 40.196 | 102 | 56 | 1 | 251 | 347 | 18 | 119 | 1.90e-15 | 79.0 |
Msa0392250 | MtrunA17_Chr4g0033961 | 43.478 | 92 | 52 | 0 | 417 | 508 | 6 | 97 | 1.07e-20 | 96.3 |
Msa0392250 | MtrunA17_Chr4g0033961 | 41.053 | 95 | 56 | 0 | 249 | 343 | 3 | 97 | 4.13e-19 | 91.7 |
Msa0392250 | MtrunA17_Chr4g0033961 | 36.752 | 117 | 65 | 2 | 9 | 121 | 1 | 112 | 4.78e-17 | 85.1 |
Msa0392250 | MtrunA17_Chr4g0033961 | 37.273 | 110 | 65 | 1 | 595 | 700 | 3 | 112 | 4.78e-17 | 85.1 |
Msa0392250 | MtrunA17_Chr4g0033961 | 33.333 | 123 | 66 | 2 | 827 | 938 | 3 | 120 | 2.06e-14 | 77.0 |
Msa0392250 | MtrunA17_Chr4g0033961 | 33.813 | 139 | 75 | 4 | 945 | 1077 | 264 | 391 | 3.65e-11 | 66.6 |
Msa0392250 | MtrunA17_Chr1g0162411 | 46.667 | 90 | 48 | 0 | 417 | 506 | 7 | 96 | 1.92e-20 | 95.9 |
Msa0392250 | MtrunA17_Chr1g0162411 | 44.444 | 90 | 50 | 0 | 252 | 341 | 7 | 96 | 8.53e-19 | 90.9 |
Msa0392250 | MtrunA17_Chr1g0162411 | 38.889 | 108 | 61 | 2 | 19 | 122 | 7 | 113 | 1.66e-15 | 80.5 |
Msa0392250 | MtrunA17_Chr1g0162411 | 38.384 | 99 | 55 | 2 | 598 | 692 | 7 | 103 | 2.27e-14 | 77.0 |
Msa0392250 | MtrunA17_Chr1g0162411 | 34.783 | 92 | 60 | 0 | 830 | 921 | 7 | 98 | 3.46e-14 | 76.3 |
Msa0392250 | MtrunA17_Chr5g0421851 | 35.329 | 167 | 89 | 4 | 918 | 1078 | 34 | 187 | 2.89e-20 | 89.7 |
Msa0392250 | MtrunA17_Chr5g0421921 | 42.017 | 119 | 60 | 2 | 960 | 1078 | 3 | 112 | 1.43e-19 | 85.5 |
Msa0392250 | MtrunA17_Chr5g0421731 | 42.017 | 119 | 60 | 2 | 960 | 1078 | 3 | 112 | 1.43e-19 | 85.5 |
Msa0392250 | MtrunA17_Chr7g0233561 | 34.043 | 141 | 79 | 3 | 416 | 542 | 17 | 157 | 2.96e-18 | 87.4 |
Msa0392250 | MtrunA17_Chr7g0233561 | 36.207 | 116 | 66 | 2 | 18 | 125 | 17 | 132 | 2.57e-16 | 81.6 |
Msa0392250 | MtrunA17_Chr7g0233561 | 31.034 | 116 | 72 | 2 | 597 | 704 | 17 | 132 | 1.77e-12 | 70.1 |
Msa0392250 | MtrunA17_Chr7g0233561 | 31.356 | 118 | 76 | 1 | 251 | 363 | 17 | 134 | 2.48e-12 | 69.7 |
Msa0392250 | MtrunA17_Chr7g0233521 | 26.374 | 273 | 152 | 7 | 846 | 1077 | 2 | 266 | 6.34e-17 | 82.4 |
Msa0392250 | MtrunA17_Chr7g0233521 | 28.249 | 177 | 99 | 4 | 433 | 582 | 2 | 177 | 1.84e-14 | 75.1 |
Msa0392250 | MtrunA17_Chr7g0233521 | 36.047 | 86 | 51 | 1 | 35 | 116 | 2 | 87 | 4.57e-13 | 70.9 |
Msa0392250 | MtrunA17_Chr7g0233521 | 34.884 | 86 | 52 | 1 | 614 | 695 | 2 | 87 | 5.15e-13 | 70.9 |
Msa0392250 | MtrunA17_Chr7g0233521 | 34.021 | 97 | 59 | 1 | 268 | 359 | 2 | 98 | 5.84e-11 | 64.7 |
Msa0392250 | MtrunA17_Chr5g0419201 | 32.576 | 132 | 83 | 1 | 252 | 377 | 16 | 147 | 7.34e-17 | 80.1 |
Msa0392250 | MtrunA17_Chr5g0419201 | 37.363 | 91 | 57 | 0 | 417 | 507 | 16 | 106 | 7.92e-17 | 80.1 |
Msa0392250 | MtrunA17_Chr5g0419201 | 34.711 | 121 | 74 | 2 | 19 | 134 | 16 | 136 | 9.74e-16 | 77.0 |
Msa0392250 | MtrunA17_Chr5g0419201 | 33.333 | 99 | 62 | 1 | 598 | 692 | 16 | 114 | 1.73e-13 | 70.5 |
Msa0392250 | MtrunA17_Chr5g0419201 | 28.488 | 172 | 101 | 4 | 823 | 983 | 9 | 169 | 1.36e-11 | 64.7 |
Msa0392250 | MtrunA17_Chr3g0103191 | 27.189 | 217 | 118 | 6 | 401 | 587 | 3 | 209 | 1.14e-16 | 81.3 |
Msa0392250 | MtrunA17_Chr3g0103191 | 39.000 | 100 | 55 | 2 | 19 | 114 | 12 | 109 | 8.47e-13 | 69.7 |
Msa0392250 | MtrunA17_Chr3g0103191 | 39.394 | 99 | 54 | 2 | 598 | 692 | 12 | 108 | 4.22e-12 | 67.8 |
Msa0392250 | MtrunA17_Chr3g0103191 | 27.876 | 226 | 120 | 7 | 252 | 448 | 12 | 223 | 1.33e-11 | 66.2 |
Msa0392250 | MtrunA17_Chr3g0103151 | 38.679 | 106 | 56 | 2 | 401 | 506 | 3 | 99 | 1.44e-16 | 78.2 |
Msa0392250 | MtrunA17_Chr3g0103151 | 40.000 | 100 | 54 | 2 | 18 | 113 | 11 | 108 | 2.77e-14 | 71.6 |
Msa0392250 | MtrunA17_Chr3g0103151 | 30.496 | 141 | 95 | 2 | 251 | 390 | 11 | 149 | 3.07e-13 | 68.9 |
Msa0392250 | MtrunA17_Chr3g0103151 | 38.000 | 100 | 56 | 2 | 597 | 692 | 11 | 108 | 5.11e-13 | 68.2 |
Msa0392250 | MtrunA17_Chr8g0390841 | 21.996 | 491 | 286 | 17 | 408 | 810 | 30 | 511 | 2.61e-16 | 83.6 |
Msa0392250 | MtrunA17_Chr8g0390841 | 21.241 | 532 | 328 | 21 | 19 | 509 | 39 | 520 | 3.09e-13 | 73.6 |
Msa0392250 | MtrunA17_Chr3g0103181 | 30.693 | 202 | 105 | 8 | 416 | 588 | 11 | 206 | 1.29e-15 | 78.6 |
Msa0392250 | MtrunA17_Chr3g0103181 | 41.000 | 100 | 53 | 2 | 18 | 113 | 11 | 108 | 6.99e-14 | 73.6 |
Msa0392250 | MtrunA17_Chr3g0103181 | 39.000 | 100 | 55 | 2 | 597 | 692 | 11 | 108 | 3.23e-13 | 71.6 |
Msa0392250 | MtrunA17_Chr3g0103181 | 29.412 | 170 | 92 | 5 | 251 | 415 | 11 | 157 | 1.50e-12 | 69.3 |
Msa0392250 | MtrunA17_Chr1g0162421 | 48.276 | 58 | 30 | 0 | 431 | 488 | 7 | 64 | 2.34e-15 | 71.6 |
Msa0392250 | MtrunA17_Chr1g0162421 | 47.273 | 55 | 29 | 0 | 33 | 87 | 7 | 61 | 1.09e-13 | 67.0 |
Msa0392250 | MtrunA17_Chr1g0162421 | 47.170 | 53 | 28 | 0 | 614 | 666 | 9 | 61 | 3.17e-13 | 65.5 |
Msa0392250 | MtrunA17_Chr1g0162421 | 43.103 | 58 | 33 | 0 | 266 | 323 | 7 | 64 | 2.69e-12 | 62.8 |
Msa0392250 | MtrunA17_Chr1g0162421 | 39.655 | 58 | 35 | 0 | 844 | 901 | 7 | 64 | 9.72e-11 | 58.5 |
Msa0392250 | MtrunA17_Chr7g0233571 | 35.870 | 92 | 59 | 0 | 416 | 507 | 9 | 100 | 2.58e-15 | 76.3 |
Msa0392250 | MtrunA17_Chr7g0233571 | 34.951 | 103 | 63 | 1 | 597 | 695 | 9 | 111 | 1.04e-14 | 74.7 |
Msa0392250 | MtrunA17_Chr7g0233571 | 35.000 | 100 | 61 | 1 | 18 | 113 | 9 | 108 | 2.26e-14 | 73.6 |
Msa0392250 | MtrunA17_Chr7g0233571 | 30.882 | 136 | 84 | 1 | 251 | 386 | 9 | 134 | 2.84e-14 | 73.6 |
Msa0392250 | MtrunA17_Chr7g0233571 | 28.800 | 125 | 78 | 1 | 829 | 942 | 9 | 133 | 1.75e-12 | 68.2 |
Msa0392250 | MtrunA17_Chr1g0163221 | 26.174 | 298 | 177 | 10 | 251 | 514 | 10 | 298 | 4.58e-15 | 78.2 |
Msa0392250 | MtrunA17_Chr1g0163221 | 33.333 | 105 | 63 | 2 | 409 | 509 | 3 | 104 | 1.02e-11 | 67.8 |
Msa0392250 | MtrunA17_Chr7g0233531 | 25.275 | 273 | 155 | 7 | 846 | 1077 | 2 | 266 | 4.96e-15 | 77.0 |
Msa0392250 | MtrunA17_Chr7g0233531 | 28.814 | 177 | 97 | 6 | 433 | 582 | 2 | 176 | 2.24e-11 | 65.9 |
Msa0392250 | MtrunA17_Chr7g0233531 | 32.283 | 127 | 66 | 3 | 268 | 377 | 2 | 125 | 5.73e-11 | 64.7 |
Msa0392250 | MtrunA17_Chr7g0233531 | 33.735 | 83 | 51 | 1 | 35 | 113 | 2 | 84 | 9.07e-11 | 63.9 |
Msa0392250 | MtrunA17_Chr1g0163071 | 24.342 | 304 | 139 | 10 | 846 | 1075 | 2 | 288 | 5.31e-15 | 77.4 |
Msa0392250 | MtrunA17_Chr1g0163071 | 24.579 | 297 | 128 | 9 | 35 | 243 | 2 | 290 | 7.45e-13 | 70.9 |
Msa0392250 | MtrunA17_Chr1g0163071 | 23.368 | 291 | 169 | 9 | 268 | 508 | 2 | 288 | 7.44e-12 | 67.8 |
Msa0392250 | MtrunA17_Chr1g0163071 | 37.647 | 85 | 48 | 1 | 433 | 512 | 2 | 86 | 4.55e-11 | 65.5 |
Msa0392250 | MtrunA17_Chr3g0103171 | 25.098 | 255 | 135 | 5 | 34 | 232 | 5 | 259 | 6.28e-15 | 76.3 |
Msa0392250 | MtrunA17_Chr3g0103171 | 25.735 | 272 | 148 | 9 | 845 | 1073 | 5 | 265 | 6.39e-15 | 76.3 |
Msa0392250 | MtrunA17_Chr3g0103171 | 29.189 | 185 | 99 | 4 | 432 | 585 | 5 | 188 | 1.13e-14 | 75.5 |
Msa0392250 | MtrunA17_Chr3g0103171 | 42.169 | 83 | 44 | 1 | 614 | 692 | 6 | 88 | 3.08e-13 | 71.2 |
Msa0392250 | MtrunA17_Chr3g0103171 | 27.703 | 148 | 91 | 3 | 267 | 414 | 5 | 136 | 1.17e-12 | 69.7 |
Msa0392250 | MtrunA17_Chr1g0154161 | 23.741 | 278 | 190 | 7 | 251 | 506 | 29 | 306 | 5.06e-14 | 74.7 |
Msa0392250 | MtrunA17_Chr1g0154161 | 23.958 | 288 | 166 | 10 | 829 | 1073 | 29 | 306 | 8.67e-12 | 67.8 |
Msa0392250 | MtrunA17_Chr1g0154161 | 24.878 | 205 | 123 | 3 | 414 | 587 | 27 | 231 | 3.49e-11 | 65.9 |
Msa0392250 | MtrunA17_Chr6g0467351 | 34.615 | 104 | 62 | 2 | 416 | 513 | 14 | 117 | 1.36e-13 | 71.6 |
Msa0392250 | MtrunA17_Chr6g0467351 | 35.659 | 129 | 69 | 4 | 251 | 368 | 14 | 139 | 4.20e-13 | 70.1 |
Msa0392250 | MtrunA17_Chr4g0067431 | 25.397 | 315 | 163 | 11 | 251 | 508 | 14 | 313 | 2.03e-13 | 72.8 |
Msa0392250 | MtrunA17_Chr7g0233541 | 33.858 | 127 | 71 | 5 | 35 | 149 | 2 | 127 | 3.41e-13 | 71.6 |
Msa0392250 | MtrunA17_Chr7g0233541 | 33.036 | 112 | 64 | 4 | 614 | 715 | 2 | 112 | 4.76e-12 | 68.2 |
Msa0392250 | MtrunA17_Chr7g0233541 | 27.513 | 189 | 94 | 7 | 433 | 579 | 2 | 189 | 1.27e-11 | 67.0 |
Msa0392250 | MtrunA17_Chr7g0233541 | 33.981 | 103 | 61 | 2 | 268 | 363 | 2 | 104 | 2.17e-11 | 66.2 |
Msa0392250 | MtrunA17_Chr1g0163101 | 29.286 | 140 | 90 | 4 | 251 | 384 | 16 | 152 | 2.61e-12 | 66.6 |
Msa0392250 | MtrunA17_Chr1g0163131 | 23.826 | 298 | 172 | 11 | 239 | 494 | 8 | 292 | 1.84e-11 | 66.6 |
Msa0392250 | MtrunA17_Chr1g0163251 | 23.828 | 256 | 157 | 9 | 261 | 488 | 14 | 259 | 1.96e-11 | 67.4 |
Msa0392250 | MtrunA17_Chr1g0208771 | 24.232 | 293 | 147 | 8 | 845 | 1075 | 12 | 291 | 3.48e-11 | 67.0 |
Msa0392250 | MtrunA17_Chr1g0154111 | 28.261 | 184 | 108 | 8 | 156 | 336 | 275 | 437 | 5.03e-11 | 67.0 |
Msa0392250 | MtrunA17_Chr1g0163231 | 22.932 | 266 | 170 | 6 | 252 | 493 | 9 | 263 | 8.41e-11 | 64.3 |
Msa0392250 | MtrunA17_Chr1g0154101 | 36.957 | 92 | 56 | 2 | 251 | 342 | 183 | 272 | 9.62e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0392250 | AT3G18990.1 | 38.136 | 118 | 72 | 1 | 417 | 534 | 6 | 122 | 1.51e-21 | 97.8 |
Msa0392250 | AT3G18990.1 | 41.489 | 94 | 55 | 0 | 252 | 345 | 6 | 99 | 1.73e-19 | 91.7 |
Msa0392250 | AT3G18990.1 | 39.394 | 99 | 56 | 1 | 19 | 113 | 6 | 104 | 1.20e-16 | 83.2 |
Msa0392250 | AT3G18990.1 | 37.374 | 99 | 58 | 1 | 598 | 692 | 6 | 104 | 9.53e-16 | 80.5 |
Msa0392250 | AT3G18990.1 | 35.227 | 88 | 57 | 0 | 830 | 917 | 6 | 93 | 7.60e-14 | 74.7 |
Msa0392250 | AT3G18990.1 | 34.161 | 161 | 85 | 5 | 927 | 1079 | 194 | 341 | 4.48e-12 | 69.3 |
Msa0392250 | AT3G18990.2 | 38.136 | 118 | 72 | 1 | 417 | 534 | 6 | 122 | 3.74e-21 | 97.4 |
Msa0392250 | AT3G18990.2 | 41.489 | 94 | 55 | 0 | 252 | 345 | 6 | 99 | 2.86e-19 | 91.7 |
Msa0392250 | AT3G18990.2 | 39.394 | 99 | 56 | 1 | 19 | 113 | 6 | 104 | 1.74e-16 | 83.2 |
Msa0392250 | AT3G18990.2 | 37.374 | 99 | 58 | 1 | 598 | 692 | 6 | 104 | 1.48e-15 | 80.5 |
Msa0392250 | AT3G18990.2 | 35.227 | 88 | 57 | 0 | 830 | 917 | 6 | 93 | 1.17e-13 | 74.3 |
Msa0392250 | AT3G18990.2 | 33.951 | 162 | 86 | 5 | 927 | 1080 | 194 | 342 | 6.88e-12 | 68.9 |
Msa0392250 | AT3G18960.2 | 37.500 | 120 | 70 | 1 | 233 | 347 | 11 | 130 | 8.99e-20 | 89.0 |
Msa0392250 | AT3G18960.2 | 35.965 | 114 | 70 | 1 | 396 | 509 | 12 | 122 | 8.57e-18 | 83.2 |
Msa0392250 | AT3G18960.2 | 34.167 | 120 | 72 | 2 | 579 | 694 | 14 | 130 | 4.69e-16 | 78.2 |
Msa0392250 | AT3G18960.2 | 33.929 | 112 | 70 | 1 | 6 | 113 | 17 | 128 | 3.37e-15 | 75.9 |
Msa0392250 | AT3G18960.2 | 36.275 | 102 | 54 | 1 | 828 | 918 | 28 | 129 | 1.51e-13 | 70.9 |
Msa0392250 | AT3G18960.1 | 37.500 | 120 | 70 | 1 | 233 | 347 | 11 | 130 | 1.00e-19 | 89.4 |
Msa0392250 | AT3G18960.1 | 35.965 | 114 | 70 | 1 | 396 | 509 | 12 | 122 | 1.09e-17 | 83.6 |
Msa0392250 | AT3G18960.1 | 34.167 | 120 | 72 | 2 | 579 | 694 | 14 | 130 | 1.12e-15 | 77.4 |
Msa0392250 | AT3G18960.1 | 33.929 | 112 | 70 | 1 | 6 | 113 | 17 | 128 | 7.04e-15 | 75.1 |
Msa0392250 | AT3G18960.1 | 36.275 | 102 | 54 | 1 | 828 | 918 | 28 | 129 | 2.06e-13 | 70.9 |
Msa0392250 | AT4G01580.1 | 41.748 | 103 | 55 | 1 | 250 | 347 | 28 | 130 | 2.17e-19 | 87.8 |
Msa0392250 | AT4G01580.1 | 36.607 | 112 | 68 | 1 | 396 | 507 | 12 | 120 | 2.20e-17 | 82.0 |
Msa0392250 | AT4G01580.1 | 35.780 | 109 | 66 | 1 | 590 | 694 | 22 | 130 | 3.12e-16 | 78.6 |
Msa0392250 | AT4G01580.1 | 33.929 | 112 | 70 | 1 | 6 | 113 | 17 | 128 | 4.52e-15 | 75.5 |
Msa0392250 | AT4G01580.1 | 38.235 | 102 | 52 | 1 | 828 | 918 | 28 | 129 | 5.80e-14 | 72.0 |
Msa0392250 | AT1G49475.1 | 38.462 | 130 | 71 | 3 | 396 | 520 | 16 | 141 | 1.27e-18 | 85.5 |
Msa0392250 | AT1G49475.1 | 34.286 | 140 | 85 | 3 | 222 | 355 | 3 | 141 | 5.55e-16 | 77.8 |
Msa0392250 | AT1G49475.1 | 35.772 | 123 | 74 | 2 | 5 | 123 | 20 | 141 | 2.75e-15 | 75.9 |
Msa0392250 | AT1G49475.1 | 36.800 | 125 | 72 | 3 | 582 | 702 | 20 | 141 | 3.08e-15 | 75.9 |
Msa0392250 | AT1G26680.6 | 21.224 | 523 | 348 | 21 | 18 | 494 | 14 | 518 | 5.85e-15 | 80.1 |
Msa0392250 | AT1G26680.6 | 22.787 | 531 | 343 | 24 | 597 | 1072 | 14 | 532 | 3.72e-14 | 77.8 |
Msa0392250 | AT1G26680.5 | 21.224 | 523 | 348 | 21 | 18 | 494 | 14 | 518 | 6.90e-15 | 80.1 |
Msa0392250 | AT1G26680.5 | 22.787 | 531 | 343 | 24 | 597 | 1072 | 14 | 532 | 3.68e-14 | 77.8 |
Msa0392250 | AT3G18960.3 | 39.535 | 86 | 47 | 1 | 267 | 347 | 8 | 93 | 2.65e-14 | 72.4 |
Msa0392250 | AT3G18960.3 | 37.179 | 78 | 49 | 0 | 432 | 509 | 8 | 85 | 7.74e-12 | 65.5 |
Msa0392250 | AT3G18960.3 | 35.294 | 85 | 51 | 1 | 614 | 694 | 9 | 93 | 1.85e-11 | 64.3 |
Msa0392250 | AT1G26680.1 | 22.031 | 522 | 349 | 21 | 18 | 497 | 14 | 519 | 1.38e-13 | 75.9 |
Msa0392250 | AT1G26680.4 | 22.031 | 522 | 349 | 21 | 18 | 497 | 14 | 519 | 1.39e-13 | 75.9 |
Msa0392250 | AT1G49480.3 | 32.143 | 140 | 79 | 3 | 945 | 1079 | 98 | 226 | 6.22e-12 | 67.0 |
Msa0392250 | AT1G49480.1 | 32.143 | 140 | 79 | 3 | 945 | 1079 | 98 | 226 | 6.22e-12 | 67.0 |
Msa0392250 | AT1G49480.2 | 32.143 | 140 | 79 | 3 | 945 | 1079 | 98 | 226 | 6.22e-12 | 67.0 |
Find 229 sgRNAs with CRISPR-Local
Find 703 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGAGTTTATAACAAAATT+TGG | 0.100922 | 3_2:-5237382 | Msa0392250:CDS |
ATAATTTCCCATTAGAATTT+TGG | 0.142530 | 3_2:+5232188 | None:intergenic |
ACTGCTTTCCTTGAGAATTT+TGG | 0.150373 | 3_2:+5236852 | None:intergenic |
TTAGAATTTACGAGCTTTAT+AGG | 0.186540 | 3_2:+5226394 | None:intergenic |
AGTAATATCCTTTGATCTTT+TGG | 0.190901 | 3_2:+5228001 | None:intergenic |
GGATGGTCTTATTTGGAAAA+TGG | 0.199369 | 3_2:-5226919 | Msa0392250:CDS |
ATGGAATCCGTAGATTTCTT+AGG | 0.206073 | 3_2:-5227698 | Msa0392250:CDS |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3_2:-5237244 | Msa0392250:intron |
CTGTTCTGGATGGTCTTATT+TGG | 0.222871 | 3_2:-5226926 | Msa0392250:CDS |
TGATGGTCTTACTTGGAAAT+TGG | 0.227158 | 3_2:-5236120 | Msa0392250:CDS |
CAATTCCTAAACCTGCTTAT+AGG | 0.229958 | 3_2:+5226021 | None:intergenic |
GAATACTATTCCATTTATTA+TGG | 0.231914 | 3_2:-5228164 | Msa0392250:intron |
GGCAGCATCCTTTGATCTTT+TGG | 0.235120 | 3_2:+5237081 | None:intergenic |
GAACGAAAAGAAGTGTTTAT+TGG | 0.235783 | 3_2:+5227966 | None:intergenic |
AAGTGAGAGTCATGAGAAAA+AGG | 0.253305 | 3_2:-5232292 | Msa0392250:CDS |
AACATTATTATAAAGTCTTC+TGG | 0.259297 | 3_2:+5226981 | None:intergenic |
GATGAGTTTATAACAAGATT+TGG | 0.275708 | 3_2:-5232612 | Msa0392250:CDS |
TATGACCTTCTTAAAATGTT+TGG | 0.280661 | 3_2:+5227175 | None:intergenic |
TATGGCCTTCTTAAAATGTT+TGG | 0.280661 | 3_2:+5236325 | None:intergenic |
TACTATTTCTTTGTCATGAA+TGG | 0.283812 | 3_2:+5227142 | None:intergenic |
TAAGTAACAACCATAATAAA+TGG | 0.285633 | 3_2:+5228154 | None:intergenic |
CTCCATTAGTCCTCCAAGTT+TGG | 0.288512 | 3_2:+5228054 | None:intergenic |
TACTATTTGTTTGTCATGAA+TGG | 0.295878 | 3_2:+5236292 | None:intergenic |
GAAGACTTTATAATAATGTT+TGG | 0.300221 | 3_2:-5226978 | Msa0392250:CDS |
CACCACAGTACTATGCTTAT+AGG | 0.300478 | 3_2:+5235797 | None:intergenic |
GATGAGTTTATAACAAGATA+TGG | 0.301447 | 3_2:-5228302 | Msa0392250:CDS |
GGCTTTATGCGTTGATGATC+TGG | 0.303110 | 3_2:+5226330 | None:intergenic |
CGATGGTCGTGAGTGGGATA+TGG | 0.308591 | 3_2:-5237323 | Msa0392250:CDS |
TTTGCAGAATACTATTCTAT+AGG | 0.313465 | 3_2:-5232480 | Msa0392250:CDS |
CTGTGTTTGACTGCTGTAAT+GGG | 0.320455 | 3_2:-5226088 | Msa0392250:three_prime_UTR |
CGTTGTTACAGTTACTGTTC+TGG | 0.322366 | 3_2:-5226940 | Msa0392250:CDS |
CCATTAGTTATTCGCATTGC+TGG | 0.322446 | 3_2:+5227717 | None:intergenic |
AACATTGTTATAAAATCTTC+AGG | 0.326094 | 3_2:+5236182 | None:intergenic |
CACTGCATAGTGGCTGGCTT+TGG | 0.335321 | 3_2:+5227944 | None:intergenic |
TTGCAGAATACTATTCTATA+GGG | 0.341018 | 3_2:-5232479 | Msa0392250:CDS |
AACGAAAAGAAGTGTTTATT+GGG | 0.345284 | 3_2:+5227967 | None:intergenic |
CATGATTCATTATTTATAGT+AGG | 0.346388 | 3_2:+5226138 | None:intergenic |
AAACAAACAATGAGTGTTCT+AGG | 0.346958 | 3_2:-5226707 | Msa0392250:CDS |
AGAATCCTATAAGCAGGTTT+AGG | 0.347207 | 3_2:-5226026 | Msa0392250:three_prime_UTR |
ATGAGTTTATAACAAAATTT+GGG | 0.347730 | 3_2:-5237381 | Msa0392250:CDS |
TTCAAAACTCCGAGGACTAA+TGG | 0.352679 | 3_2:-5237136 | Msa0392250:CDS |
GTGGGAAGTTTCTTGTGTAT+TGG | 0.358675 | 3_2:-5227754 | Msa0392250:CDS |
TGCACAGCCGCCAAAGGCTT+TGG | 0.359702 | 3_2:+5237024 | None:intergenic |
TCCATTGTGTAGTATGTTCC+TGG | 0.362474 | 3_2:-5236920 | Msa0392250:intron |
TTTCTTATCCATTCCAAACT+TGG | 0.371290 | 3_2:-5228067 | Msa0392250:CDS |
AAGACTTTATAATAATGTTT+GGG | 0.374815 | 3_2:-5226977 | Msa0392250:CDS |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3_2:+5236307 | None:intergenic |
ATAAAGCTCGTAAATTCTAA+TGG | 0.378322 | 3_2:-5226391 | Msa0392250:CDS |
CTCAAAACTCCAAGTACTAA+TGG | 0.380211 | 3_2:-5235933 | Msa0392250:CDS |
CTGTACCTGATGGTCTTACT+TGG | 0.380651 | 3_2:-5236127 | Msa0392250:CDS |
TGAAGCATGAACGGAACATT+TGG | 0.380851 | 3_2:+5227795 | None:intergenic |
TATTGTGGAGCAAATATATA+AGG | 0.383893 | 3_2:+5226433 | None:intergenic |
TTCCAAACTTGGAGGACTAA+TGG | 0.389564 | 3_2:-5228056 | Msa0392250:CDS |
TTCCTGTGTTTCAAATATGA+AGG | 0.394296 | 3_2:-5232447 | Msa0392250:CDS |
CTCTGTCCTGCCACCGGCGG+CGG | 0.394380 | 3_2:-5233636 | Msa0392250:CDS |
GTGCTCGGACACTTTATGTT+TGG | 0.397057 | 3_2:+5237109 | None:intergenic |
TCTGTGTTTGACTGCTGTAA+TGG | 0.402147 | 3_2:-5226089 | Msa0392250:three_prime_UTR |
TGGAGCATGAACGGAACCTT+TGG | 0.402900 | 3_2:+5236872 | None:intergenic |
AAGTGAGAGTCAAGGAAATA+AGG | 0.405204 | 3_2:-5226658 | Msa0392250:CDS |
GAGCTCGGACACTTTATGTT+TGG | 0.406751 | 3_2:+5228029 | None:intergenic |
ACTATTTGTTTGTCATGAAT+GGG | 0.410462 | 3_2:+5236293 | None:intergenic |
ACTATTTCTTTGTCATGAAT+GGG | 0.411715 | 3_2:+5227143 | None:intergenic |
CCAGCAATGCGAATAACTAA+TGG | 0.412619 | 3_2:-5227717 | Msa0392250:CDS |
AATCTTGTTATAAACTCATC+TGG | 0.413404 | 3_2:+5232615 | None:intergenic |
TGCAGGCGGAGAAGGAAGTT+AGG | 0.415021 | 3_2:-5227202 | Msa0392250:intron |
TAAGCAGGTTTAGGAATTGT+TGG | 0.415062 | 3_2:-5226017 | Msa0392250:three_prime_UTR |
ACTCTCACTTGTTTCAACCT+TGG | 0.424742 | 3_2:+5226671 | None:intergenic |
AGCATAATTGATTTCATCCC+TGG | 0.425701 | 3_2:+5235872 | None:intergenic |
TTCAAAACTCAAAGTACAAA+TGG | 0.427538 | 3_2:-5232366 | Msa0392250:CDS |
TATCTTGTTATAAACTCATC+TGG | 0.429283 | 3_2:+5228305 | None:intergenic |
AACAATGAGTGTTCTAGGCC+TGG | 0.431083 | 3_2:-5226702 | Msa0392250:CDS |
GTGGCAAGTTTCTTGTATAT+CGG | 0.431531 | 3_2:-5236831 | Msa0392250:CDS |
TTTGTTTCTCCACTACTACT+TGG | 0.437947 | 3_2:+5226723 | None:intergenic |
TATTTAGATTTCAAGTATGA+AGG | 0.439885 | 3_2:-5237217 | Msa0392250:intron |
TCCCTTCATATTCGAAAGAC+AGG | 0.440227 | 3_2:+5236012 | None:intergenic |
ATACTTCCCTCACCCATTCA+TGG | 0.444076 | 3_2:-5233584 | Msa0392250:CDS |
TTTGAATCTTTCTCCGGCTC+CGG | 0.445887 | 3_2:+5228823 | None:intergenic |
TGGAATCCGTAGATTTCTTA+GGG | 0.446234 | 3_2:-5227697 | Msa0392250:CDS |
TTTGTTTCTCCATTAGTACT+TGG | 0.446615 | 3_2:+5235924 | None:intergenic |
TCTTTCTCCGGCTCCGGCGA+CGG | 0.452971 | 3_2:+5228829 | None:intergenic |
TTTGAATCCTTCTCCGGCGA+CGG | 0.453621 | 3_2:+5238686 | None:intergenic |
GTAACTTGTAACACCACAAC+AGG | 0.456427 | 3_2:+5227621 | None:intergenic |
CTGTTCCCGATGGTTGTGAT+TGG | 0.457952 | 3_2:-5228250 | Msa0392250:CDS |
CTGTTCCTGATGGTCGTGAT+TGG | 0.459514 | 3_2:-5232560 | Msa0392250:CDS |
ATGATTCATTATTTATAGTA+GGG | 0.460790 | 3_2:+5226139 | None:intergenic |
CTTTCTCCGCCGCCGGTGGC+AGG | 0.463519 | 3_2:+5233630 | None:intergenic |
TTAGCACAACTGGACTCTCC+TGG | 0.465043 | 3_2:+5226215 | None:intergenic |
ACTCTCACTTGTTTCAACCT+TGG | 0.466400 | 3_2:+5232305 | None:intergenic |
AATTTCCAAGTAAGACCATC+AGG | 0.471155 | 3_2:+5236122 | None:intergenic |
ATGTGTTCCGTCGCCGGAGC+CGG | 0.471949 | 3_2:-5228836 | Msa0392250:CDS |
TCTGTTCCTTGATCCTCACT+TGG | 0.472253 | 3_2:+5235840 | None:intergenic |
AGGCAGAACAATCTGTCATA+TGG | 0.474080 | 3_2:-5226262 | Msa0392250:CDS |
CAATACTATTCTTTAAGATA+CGG | 0.474788 | 3_2:-5236041 | Msa0392250:CDS |
GTAACTTGTAACACAGCAAC+AGG | 0.476992 | 3_2:+5236698 | None:intergenic |
CTTATCCATTCCAAACTTGG+AGG | 0.477254 | 3_2:-5228064 | Msa0392250:CDS |
TGTTCCCGATGGTTGTGATT+GGG | 0.478145 | 3_2:-5228249 | Msa0392250:CDS |
ATGTGTTCCGTCGCCGGAGA+AGG | 0.478623 | 3_2:-5238693 | Msa0392250:CDS |
AAGATTAGAATCCTATAAGC+AGG | 0.482981 | 3_2:-5226032 | Msa0392250:three_prime_UTR |
ATTTCCCAATCACGACCATC+AGG | 0.484720 | 3_2:+5232555 | None:intergenic |
AGTGTCATAGTCGTAGAAAA+AGG | 0.486595 | 3_2:-5232329 | Msa0392250:CDS |
TGATGGTCGTGATTGGGAAA+TGG | 0.490310 | 3_2:-5232553 | Msa0392250:CDS |
ACATTTAGCTTCAGATATTG+TGG | 0.490807 | 3_2:+5226418 | None:intergenic |
GGTTTAGGAATTGTTGGACT+AGG | 0.494877 | 3_2:-5226011 | Msa0392250:three_prime_UTR |
TGTTCCTGATGGTCGTGATT+GGG | 0.496959 | 3_2:-5232559 | Msa0392250:CDS |
TTGAAATCTTTCTCCGCCGC+CGG | 0.497487 | 3_2:+5233623 | None:intergenic |
TATTGAATTGCAGGCGGAGA+AGG | 0.498005 | 3_2:-5227210 | Msa0392250:intron |
TATTGAATTGCAGGCGGAGA+AGG | 0.498005 | 3_2:-5236360 | Msa0392250:intron |
TATAGGTAGAAGTAAAAGAA+GGG | 0.498835 | 3_2:+5235814 | None:intergenic |
AATTCTAATGGGAAATTATG+TGG | 0.499901 | 3_2:-5232184 | Msa0392250:intron |
GTGGCAGGACAGAGCTTCTC+CGG | 0.500731 | 3_2:+5233645 | None:intergenic |
GAATACTATTCTTTAAGATA+CGG | 0.502713 | 3_2:-5226840 | Msa0392250:CDS |
AGTGTCCAAGGCCTAGGAAA+AGG | 0.504716 | 3_2:-5235896 | Msa0392250:CDS |
TTTCGTTCCAAAGCCTTTGG+CGG | 0.506964 | 3_2:-5237031 | Msa0392250:CDS |
ACAATGAGTGTTCTAGGCCT+GGG | 0.507287 | 3_2:-5226701 | Msa0392250:CDS |
GAGAAGATGTGTTCCGTCGC+CGG | 0.508033 | 3_2:-5228842 | Msa0392250:CDS |
TTCTTTGTCATGAATGGGCG+AGG | 0.508053 | 3_2:+5227148 | None:intergenic |
AGTGTTCTAGGCCTGGGAAA+AGG | 0.508131 | 3_2:-5226695 | Msa0392250:CDS |
CCCCTTCATATTTGAAACAC+AGG | 0.508323 | 3_2:+5232445 | None:intergenic |
TTATAGGTAGAAGTAAAAGA+AGG | 0.509475 | 3_2:+5235813 | None:intergenic |
CAAGGCCTAGGAAAAGGTCC+AGG | 0.509815 | 3_2:-5235890 | Msa0392250:CDS |
GAGAAGATGTGTTCCGTCGC+CGG | 0.510842 | 3_2:-5238699 | Msa0392250:CDS |
ATGAGTTTATAACAAGATAT+GGG | 0.513374 | 3_2:-5228301 | Msa0392250:CDS |
TTCATTATTTATAGTAGGGA+GGG | 0.513787 | 3_2:+5226143 | None:intergenic |
TATTTGCATTGCTGATGACT+CGG | 0.515832 | 3_2:+5226309 | None:intergenic |
GCGACGGAACACATCTTCTC+CGG | 0.518324 | 3_2:+5228845 | None:intergenic |
TTTGGTTCTCCATTAGTCCT+CGG | 0.518425 | 3_2:+5237127 | None:intergenic |
TTCCTGTCTTTCGAATATGA+AGG | 0.519724 | 3_2:-5236014 | Msa0392250:CDS |
TTCATGCTTCAAAATTCTCA+AGG | 0.523168 | 3_2:-5227783 | Msa0392250:CDS |
GAATACTATTCTATAGGGTA+TGG | 0.523564 | 3_2:-5232474 | Msa0392250:CDS |
ATATCCCACTCACGACCATC+GGG | 0.524249 | 3_2:+5237325 | None:intergenic |
ATTTAGATTTCAAGTATGAA+GGG | 0.527803 | 3_2:-5237216 | Msa0392250:intron |
GCAGGCGGAGAAGGAAGTTA+GGG | 0.528822 | 3_2:-5227201 | Msa0392250:intron |
TCCTGTGTTTCAAATATGAA+GGG | 0.529278 | 3_2:-5232446 | Msa0392250:CDS |
TTGTGTGTTTGAGCTGATCC+AGG | 0.531256 | 3_2:-5226233 | Msa0392250:CDS |
CATATCCCACTCACGACCAT+CGG | 0.533925 | 3_2:+5237324 | None:intergenic |
AACAAACAATGCAGGCTCGC+CGG | 0.535855 | 3_2:-5233664 | Msa0392250:intron |
GCGACGGAACACATCTTCTC+CGG | 0.538230 | 3_2:+5238702 | None:intergenic |
AGATCAAAGGATGCTGCCAA+TGG | 0.538359 | 3_2:-5237076 | Msa0392250:CDS |
TCCTGTCTTTCGAATATGAA+GGG | 0.540870 | 3_2:-5236013 | Msa0392250:CDS |
ACACGGAGTGTCCAAGGCCT+AGG | 0.542974 | 3_2:-5235902 | Msa0392250:CDS |
GTGGATTCTGTAGATTTGCA+AGG | 0.544893 | 3_2:-5236775 | Msa0392250:CDS |
TTGTTTGTCATGAATGGGCG+AGG | 0.546897 | 3_2:+5236298 | None:intergenic |
AATCCTCACTGCATAGTGGC+TGG | 0.548217 | 3_2:+5227938 | None:intergenic |
TTAGTCCTCCAAGTTTGGAA+TGG | 0.549309 | 3_2:+5228059 | None:intergenic |
AATATCCCAATCACAACCAT+CGG | 0.550561 | 3_2:+5228244 | None:intergenic |
AGATCAAAGGATATTACTTG+TGG | 0.558854 | 3_2:-5227996 | Msa0392250:CDS |
CTCTGCTTCCAAAAGATCAA+AGG | 0.559021 | 3_2:-5228009 | Msa0392250:CDS |
TACTAATTGAGTGCCATGAA+TGG | 0.560737 | 3_2:+5233571 | None:intergenic |
CTGTTCCCGATGGTCGTGAG+TGG | 0.561524 | 3_2:-5237330 | Msa0392250:CDS |
AAGGCTTTGGAACGAAAACA+AGG | 0.561637 | 3_2:+5237037 | None:intergenic |
ACAAGTTACTGCGTCTCGCA+CGG | 0.562350 | 3_2:-5236684 | Msa0392250:intron |
AGAATATTACCACATGTAGC+AGG | 0.563770 | 3_2:+5226109 | None:intergenic |
ATTCATTATTTATAGTAGGG+AGG | 0.564086 | 3_2:+5226142 | None:intergenic |
TGTTCCTAGTGAATTTGCTA+AGG | 0.564882 | 3_2:-5227829 | Msa0392250:CDS |
AAATTGGAATTGAAGAAACG+TGG | 0.566955 | 3_2:-5236104 | Msa0392250:CDS |
CACTGCTTCCAAAAGATCAA+AGG | 0.568858 | 3_2:-5237089 | Msa0392250:CDS |
TAAATTCTAATGGAGATGAG+TGG | 0.570954 | 3_2:-5226381 | Msa0392250:CDS |
AAACAAACACGGAGTGTCCA+AGG | 0.572497 | 3_2:-5235908 | Msa0392250:CDS |
GAGAAGCTCTGTCCTGCCAC+CGG | 0.575070 | 3_2:-5233642 | Msa0392250:CDS |
AAATCTTTCTCCGCCGCCGG+TGG | 0.575868 | 3_2:+5233626 | None:intergenic |
TTTACTTTAAGCTGATCAAG+AGG | 0.576543 | 3_2:-5227647 | Msa0392250:CDS |
TGTTCCTGGTGAATTTGCTA+AGG | 0.578362 | 3_2:-5236906 | Msa0392250:CDS |
GTTACAGTTACTGTTCTGGA+TGG | 0.579387 | 3_2:-5226936 | Msa0392250:CDS |
ACTAATTGAGTGCCATGAAT+GGG | 0.579633 | 3_2:+5233572 | None:intergenic |
AGGGAAAACAAGTTATCAGA+TGG | 0.579643 | 3_2:-5227678 | Msa0392250:CDS |
AAAATTCTCAAGGAAAGCAG+TGG | 0.582056 | 3_2:-5227773 | Msa0392250:CDS |
ATATCCCAATCACAACCATC+GGG | 0.582201 | 3_2:+5228245 | None:intergenic |
TCTTACTGCACAGCCGCCAA+AGG | 0.585469 | 3_2:+5237018 | None:intergenic |
GTAAAATCCTCACTGCATAG+TGG | 0.585890 | 3_2:+5227934 | None:intergenic |
ATCAGCAATGCAAATAACGC+AGG | 0.590408 | 3_2:-5226302 | Msa0392250:CDS |
AAATTCTAATGGAGATGAGT+GGG | 0.591055 | 3_2:-5226380 | Msa0392250:CDS |
CCTGTGTTTCAAATATGAAG+GGG | 0.591078 | 3_2:-5232445 | Msa0392250:CDS |
AAGGGAAAACAATCTATCAA+AGG | 0.593937 | 3_2:-5236756 | Msa0392250:CDS |
TCTTGTGTATTGGATAGACC+AGG | 0.594481 | 3_2:-5227744 | Msa0392250:CDS |
AATTGGAATTGAAGAAACGT+GGG | 0.594882 | 3_2:-5236103 | Msa0392250:CDS |
TACTTAGATTTCAAGTACGA+AGG | 0.598912 | 3_2:-5228137 | Msa0392250:intron |
TGGATTCTGTAGATTTGCAA+GGG | 0.600149 | 3_2:-5236774 | Msa0392250:CDS |
ACGACCATCGGGAACAGTAA+TGG | 0.600617 | 3_2:+5237336 | None:intergenic |
TGCTGATGATTCACCAAGTG+AGG | 0.601710 | 3_2:-5235853 | Msa0392250:CDS |
ACAACTTTGAGCTGATCAAG+AGG | 0.603297 | 3_2:-5236724 | Msa0392250:CDS |
ACATGCTTCTGAAAGAGCAA+AGG | 0.603971 | 3_2:-5232253 | Msa0392250:CDS |
GATTCACCAAGTGAGGATCA+AGG | 0.604229 | 3_2:-5235846 | Msa0392250:CDS |
GCAGGCGGAGAAGGAAGGTA+GGG | 0.604865 | 3_2:-5236351 | Msa0392250:intron |
TGTTCCCGATGGTCGTGAGT+GGG | 0.605549 | 3_2:-5237329 | Msa0392250:CDS |
TTCATGCTCCAAAATTCTCA+AGG | 0.607610 | 3_2:-5236860 | Msa0392250:CDS |
GCTACCATTACTGTTCCCGA+TGG | 0.608443 | 3_2:-5237340 | Msa0392250:CDS |
TTGAGTGCCATGAATGGGTG+AGG | 0.609441 | 3_2:+5233577 | None:intergenic |
AAATGCTTATAAAAGGGCAG+AGG | 0.610033 | 3_2:-5226619 | Msa0392250:CDS |
TGCAGGCGGAGAAGGAAGGT+AGG | 0.610068 | 3_2:-5236352 | Msa0392250:intron |
AATCCACTCGTAATTCGCAT+TGG | 0.611373 | 3_2:+5236791 | None:intergenic |
AAGAAACAATGAAGACTCAC+CGG | 0.615286 | 3_2:-5238721 | None:intergenic |
AAGAAACAATGAAGACTCGC+CGG | 0.617368 | 3_2:-5228864 | Msa0392250:intron |
ACAAGTTACAACGTTTCGCA+CGG | 0.620954 | 3_2:-5227607 | Msa0392250:intron |
TTCATATTTGAAACACAGGA+AGG | 0.623348 | 3_2:+5232449 | None:intergenic |
AAATTCTCAAGGAAAGCAGT+GGG | 0.627522 | 3_2:-5227772 | Msa0392250:CDS |
TGCTCCTTAGCAAATTCACC+AGG | 0.628603 | 3_2:+5236902 | None:intergenic |
GATATTGAACTAAAGAAATG+TGG | 0.634743 | 3_2:-5228227 | Msa0392250:CDS |
AAAATTCTCAAGGAAAGCAG+TGG | 0.638452 | 3_2:-5236850 | Msa0392250:CDS |
GCTACAATTACTGTTCCTGA+TGG | 0.638622 | 3_2:-5232570 | Msa0392250:CDS |
GCTACAATTACTGTTCCCGA+TGG | 0.639314 | 3_2:-5228260 | Msa0392250:CDS |
CTTATTCATTCAAAACTCCG+AGG | 0.640841 | 3_2:-5237144 | Msa0392250:CDS |
GTTGAAACAAGTGAGAGTCA+AGG | 0.642586 | 3_2:-5226666 | Msa0392250:CDS |
GAATTGCAGGCGGAGAAGGA+AGG | 0.644062 | 3_2:-5236356 | Msa0392250:intron |
TAGGCCTGGGAAAAGGTCCA+AGG | 0.645601 | 3_2:-5226688 | Msa0392250:CDS |
ACACCAATGCGAATTACGAG+TGG | 0.647816 | 3_2:-5236794 | Msa0392250:CDS |
AAAAGTCACGATATTTCGTG+TGG | 0.648071 | 3_2:-5226194 | Msa0392250:CDS |
TGCTCCTTAGCAAATTCACT+AGG | 0.648825 | 3_2:+5227825 | None:intergenic |
AAGCTCTGTCCTGCCACCGG+CGG | 0.650688 | 3_2:-5233639 | Msa0392250:CDS |
TCTTTGTCATGAATGGGCGA+GGG | 0.652999 | 3_2:+5227149 | None:intergenic |
TGTTTGTCATGAATGGGCGA+GGG | 0.652999 | 3_2:+5236299 | None:intergenic |
AAAATGGACTTGAAGAAATG+TGG | 0.654458 | 3_2:-5226903 | Msa0392250:CDS |
GATCAAGAGGAAGCCTGTTG+TGG | 0.656312 | 3_2:-5227634 | Msa0392250:CDS |
AGGCTTTGGAACGAAAACAA+GGG | 0.659531 | 3_2:+5237038 | None:intergenic |
TCAGCAATGCAAATAACGCA+GGG | 0.661161 | 3_2:-5226301 | Msa0392250:CDS |
TCTCACCGCATGTCTTCCCG+TGG | 0.662233 | 3_2:+5226545 | None:intergenic |
GCTACAGTTACTGTACCTGA+TGG | 0.662981 | 3_2:-5236137 | Msa0392250:CDS |
TAAGGAGCATCTGAAGCCAA+AGG | 0.672174 | 3_2:-5236888 | Msa0392250:CDS |
GGAATTGAAGAAACGTGGGG+AGG | 0.674047 | 3_2:-5236099 | Msa0392250:CDS |
AATCACCACGGGAAGACATG+CGG | 0.676904 | 3_2:-5226550 | Msa0392250:intron |
AAGGCCTAGGAAAAGGTCCA+GGG | 0.679617 | 3_2:-5235889 | Msa0392250:CDS |
GAAATGGAACTGAAGAAATG+CGG | 0.682734 | 3_2:-5232537 | Msa0392250:CDS |
ATGGAACTGAAGAAATGTGG+CGG | 0.686123 | 3_2:-5237304 | Msa0392250:CDS |
TACCTATAAGCATAGTACTG+TGG | 0.687770 | 3_2:-5235799 | Msa0392250:intron |
GATATGGAACTGAAGAAATG+TGG | 0.697083 | 3_2:-5237307 | Msa0392250:CDS |
TGAGTGCCATGAATGGGTGA+GGG | 0.700904 | 3_2:+5233578 | None:intergenic |
TACTAATGGAGAAACAAACA+CGG | 0.702116 | 3_2:-5235919 | Msa0392250:CDS |
ATGATGTTGCCTGCTACATG+TGG | 0.709171 | 3_2:-5226118 | Msa0392250:three_prime_UTR |
ATTGGAATTGAAGAAACGTG+GGG | 0.725338 | 3_2:-5236102 | Msa0392250:CDS |
GGACTTGAAGAAATGTGGCG+AGG | 0.740403 | 3_2:-5226898 | Msa0392250:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACTTCTTAATTATTATATA+TGG | - | chr3_2:5226084-5226103 | Msa0392250:three_prime_UTR | 10.0% |
!!! | AAATATATTTTAGTTCTTAA+GGG | + | chr3_2:5229714-5229733 | None:intergenic | 10.0% |
!!! | AAAATATATTTTAGTTCTTA+AGG | + | chr3_2:5229715-5229734 | None:intergenic | 10.0% |
!!! | AATTTGAGTTTATTTTTTTA+AGG | + | chr3_2:5230056-5230075 | None:intergenic | 10.0% |
!!! | ATAAATTTCAATCTTTTTAT+GGG | - | chr3_2:5234457-5234476 | Msa0392250:intron | 10.0% |
!! | TATTGTAATTCATATTATAT+AGG | - | chr3_2:5237103-5237122 | Msa0392250:CDS | 10.0% |
!!! | TATTTTTATTGCTATATTTA+TGG | - | chr3_2:5238645-5238664 | Msa0392250:CDS | 10.0% |
!! | ATTAATTATTAGTGTATGTT+TGG | - | chr3_2:5226226-5226245 | Msa0392250:CDS | 15.0% |
!! | TAGATTCAACTTTATTATTA+AGG | + | chr3_2:5226448-5226467 | None:intergenic | 15.0% |
!!! | ATTTTTGTTACATTGATAAT+AGG | + | chr3_2:5226785-5226804 | None:intergenic | 15.0% |
!! | ATGAGTTTATAACAAAATTT+GGG | - | chr3_2:5227226-5227245 | Msa0392250:intron | 15.0% |
!! | GAATACTATTCTATTTATTA+TGG | - | chr3_2:5227363-5227382 | Msa0392250:intron | 15.0% |
!!! | GAATTTTACTTTATAGTATT+TGG | - | chr3_2:5227610-5227629 | Msa0392250:CDS | 15.0% |
!! | TATTTGTTTATAATGTGAAT+TGG | - | chr3_2:5228189-5228208 | Msa0392250:CDS | 15.0% |
!!! | AAGATTTTATAACAATGTTT+GGG | - | chr3_2:5228429-5228448 | Msa0392250:intron | 15.0% |
!! | TTATGATTTAAACAAAATTG+TGG | - | chr3_2:5229344-5229363 | Msa0392250:intron | 15.0% |
!!! | TATTTTTTTAAGGATTGTTT+TGG | + | chr3_2:5230046-5230065 | None:intergenic | 15.0% |
!!! | TAATCTTGTCATTTTTATAT+TGG | - | chr3_2:5230075-5230094 | Msa0392250:intron | 15.0% |
!!! | AATCTTGTCATTTTTATATT+GGG | - | chr3_2:5230076-5230095 | Msa0392250:intron | 15.0% |
!!! | TTAAAATTAGTCATCTTTTT+AGG | - | chr3_2:5230579-5230598 | Msa0392250:intron | 15.0% |
!! | CTTCATATTAAAAACAATTA+AGG | + | chr3_2:5231489-5231508 | None:intergenic | 15.0% |
!!! | TCAAATATAACATTTTGTAA+CGG | + | chr3_2:5233030-5233049 | None:intergenic | 15.0% |
!! | AATTTCAAAGATAAATTAAG+TGG | - | chr3_2:5233206-5233225 | Msa0392250:intron | 15.0% |
!! | AAGTATAAAAAAAGGATATT+TGG | - | chr3_2:5233513-5233532 | Msa0392250:intron | 15.0% |
!!! | ATTTTATCACAAATAATTCA+TGG | + | chr3_2:5233875-5233894 | None:intergenic | 15.0% |
!! | TGAATTATTTGTGATAAAAT+TGG | - | chr3_2:5233875-5233894 | Msa0392250:intron | 15.0% |
!! | GAATTATTTGTGATAAAATT+GGG | - | chr3_2:5233876-5233895 | Msa0392250:intron | 15.0% |
!! | AATTATTTGTGATAAAATTG+GGG | - | chr3_2:5233877-5233896 | Msa0392250:intron | 15.0% |
!!! | ATTTTCTAAAATTGAATTGA+AGG | - | chr3_2:5234036-5234055 | Msa0392250:intron | 15.0% |
!!! | CATAAATTTCAATCTTTTTA+TGG | - | chr3_2:5234456-5234475 | Msa0392250:intron | 15.0% |
!!! | TGTACAAATAATATTGATTT+AGG | + | chr3_2:5234557-5234576 | None:intergenic | 15.0% |
!! | TACCTAAATCAATATTATTT+AGG | + | chr3_2:5234552-5234571 | None:intergenic | 15.0% |
!!! | ATCAACTTTTTCTTATAAAT+AGG | - | chr3_2:5235359-5235378 | Msa0392250:intron | 15.0% |
!!! | TGAATTCAACAATATATTTT+AGG | - | chr3_2:5236111-5236130 | Msa0392250:CDS | 15.0% |
!! | TCATTGTTTATAATTTGAAT+TGG | - | chr3_2:5237339-5237358 | Msa0392250:CDS | 15.0% |
!! | AAGACTTTATAATAATGTTT+GGG | - | chr3_2:5237630-5237649 | Msa0392250:intron | 15.0% |
!! | ATGATTCATTATTTATAGTA+GGG | + | chr3_2:5238471-5238490 | None:intergenic | 15.0% |
!! | TAGATTTAGAAAACAAGTTA+GGG | + | chr3_2:5226186-5226205 | None:intergenic | 20.0% |
!! | TTAGATTTAGAAAACAAGTT+AGG | + | chr3_2:5226187-5226206 | None:intergenic | 20.0% |
!!! | AAAATTTGATTTTGAAGCTT+TGG | - | chr3_2:5226261-5226280 | Msa0392250:CDS | 20.0% |
!!! | TATCTTTTTCTGAATTTGTT+TGG | - | chr3_2:5226936-5226955 | Msa0392250:CDS | 20.0% |
!!! | AATTTTGTTATAAACTCATC+TGG | + | chr3_2:5227225-5227244 | None:intergenic | 20.0% |
!! | GATGAGTTTATAACAAAATT+TGG | - | chr3_2:5227225-5227244 | Msa0392250:intron | 20.0% |
!!! | AATTTTTGCAAAAGAAAACT+TGG | + | chr3_2:5227329-5227348 | None:intergenic | 20.0% |
!!! | AAGTTTTCTTTTGCAAAAAT+TGG | - | chr3_2:5227328-5227347 | Msa0392250:intron | 20.0% |
!!! | TATTTAGATTTCAAGTATGA+AGG | - | chr3_2:5227390-5227409 | Msa0392250:intron | 20.0% |
!!! | ATTTAGATTTCAAGTATGAA+GGG | - | chr3_2:5227391-5227410 | Msa0392250:intron | 20.0% |
!!! | AAGCAAATTATTTTATTCAC+TGG | + | chr3_2:5228075-5228094 | None:intergenic | 20.0% |
!! | AACATTGTTATAAAATCTTC+AGG | + | chr3_2:5228428-5228447 | None:intergenic | 20.0% |
!!! | GAAGATTTTATAACAATGTT+TGG | - | chr3_2:5228428-5228447 | Msa0392250:intron | 20.0% |
!!! | CAATACTATTCTTTAAGATA+CGG | - | chr3_2:5228566-5228585 | Msa0392250:intron | 20.0% |
!!! | AGTCTCAAAATGTATTTTAT+GGG | + | chr3_2:5229507-5229526 | None:intergenic | 20.0% |
!!! | AAGTCTCAAAATGTATTTTA+TGG | + | chr3_2:5229508-5229527 | None:intergenic | 20.0% |
!! | AAATCTCAGAACATATTTAA+AGG | + | chr3_2:5229629-5229648 | None:intergenic | 20.0% |
!!! | ATCTTGTCATTTTTATATTG+GGG | - | chr3_2:5230077-5230096 | Msa0392250:intron | 20.0% |
!! | TTAAAAGAAGAAGAAAGTAA+AGG | + | chr3_2:5230342-5230361 | None:intergenic | 20.0% |
!!! | AAAGATGACTAATTTTAAGT+GGG | + | chr3_2:5230577-5230596 | None:intergenic | 20.0% |
!!! | AAAAGATGACTAATTTTAAG+TGG | + | chr3_2:5230578-5230597 | None:intergenic | 20.0% |
!!! | AAAAACTAAAAGAACTTGTT+TGG | - | chr3_2:5230687-5230706 | Msa0392250:intron | 20.0% |
!!! | AAAACTAAAAGAACTTGTTT+GGG | - | chr3_2:5230688-5230707 | Msa0392250:intron | 20.0% |
!!! | TTTGAGACATAAACATATAT+AGG | + | chr3_2:5231100-5231119 | None:intergenic | 20.0% |
!! | TTTAATATGAAGCTAGAATT+AGG | - | chr3_2:5231497-5231516 | Msa0392250:intron | 20.0% |
!!! | TTAGTTTAATTTGTGAATTG+TGG | - | chr3_2:5231602-5231621 | Msa0392250:intron | 20.0% |
!!! | TAGTTTAATTTGTGAATTGT+GGG | - | chr3_2:5231603-5231622 | Msa0392250:intron | 20.0% |
!! | TAAGTAAACTTAGTAGAAAA+AGG | + | chr3_2:5231779-5231798 | None:intergenic | 20.0% |
!!! | ACATTTGAGATTTACATAAT+TGG | + | chr3_2:5231907-5231926 | None:intergenic | 20.0% |
!!! | GTTTTTTGGATTAAATTCTT+TGG | + | chr3_2:5232386-5232405 | None:intergenic | 20.0% |
!!! | GAATTTTGGAACAAAAATAA+GGG | + | chr3_2:5232408-5232427 | None:intergenic | 20.0% |
!!! | AGAATTTTGGAACAAAAATA+AGG | + | chr3_2:5232409-5232428 | None:intergenic | 20.0% |
!!! | TTTTTGTTCCAAAATTCTAA+TGG | - | chr3_2:5232411-5232430 | Msa0392250:intron | 20.0% |
!!! | TTTTGTTCCAAAATTCTAAT+GGG | - | chr3_2:5232412-5232431 | Msa0392250:intron | 20.0% |
!!! | ATAATTTCCCATTAGAATTT+TGG | + | chr3_2:5232422-5232441 | None:intergenic | 20.0% |
!! | TTTGGTATTTGATATTTACA+TGG | - | chr3_2:5232857-5232876 | Msa0392250:intron | 20.0% |
!! | ATTATAATAGATCATCATAG+TGG | - | chr3_2:5233168-5233187 | Msa0392250:intron | 20.0% |
!! | TTATAATAGATCATCATAGT+GGG | - | chr3_2:5233169-5233188 | Msa0392250:intron | 20.0% |
!! | CTACTATAAAATGTAGTAAA+TGG | - | chr3_2:5233397-5233416 | Msa0392250:intron | 20.0% |
!!! | TATCCTTTTTTTATACTTGA+TGG | + | chr3_2:5233511-5233530 | None:intergenic | 20.0% |
!!! | TACAATGTACTTTAATTTGT+TGG | - | chr3_2:5233585-5233604 | Msa0392250:CDS | 20.0% |
!!! | GATATTGTTACTTCTAATTT+TGG | + | chr3_2:5234130-5234149 | None:intergenic | 20.0% |
!!! | AGAATTGATTTTGTAATGTT+TGG | + | chr3_2:5234202-5234221 | None:intergenic | 20.0% |
!!! | AAGTTTTTTGGTTATACTTT+TGG | + | chr3_2:5234252-5234271 | None:intergenic | 20.0% |
!! | TCTCTTCTATAAAATTGATT+GGG | + | chr3_2:5234342-5234361 | None:intergenic | 20.0% |
!! | AAATTGTCAAATTTAATGGA+GGG | + | chr3_2:5234374-5234393 | None:intergenic | 20.0% |
!! | TAAATTGTCAAATTTAATGG+AGG | + | chr3_2:5234375-5234394 | None:intergenic | 20.0% |
!! | CACTAAATTGTCAAATTTAA+TGG | + | chr3_2:5234378-5234397 | None:intergenic | 20.0% |
!!! | TGACTAATTTTTCTATACAT+TGG | + | chr3_2:5234733-5234752 | None:intergenic | 20.0% |
!!! | TGCCTAAATAATATTGATTT+AGG | - | chr3_2:5235174-5235193 | Msa0392250:intron | 20.0% |
!!! | GACAATTTTTATTTTTGTAC+TGG | - | chr3_2:5235429-5235448 | Msa0392250:intron | 20.0% |
!! | ATTAAATATATAGTGATGTG+AGG | + | chr3_2:5235615-5235634 | None:intergenic | 20.0% |
!! | ATGAGTTTATAACAAGATAT+GGG | - | chr3_2:5236306-5236325 | Msa0392250:CDS | 20.0% |
!! | GAATACTATTCCATTTATTA+TGG | - | chr3_2:5236443-5236462 | Msa0392250:intron | 20.0% |
!! | TAAGTAACAACCATAATAAA+TGG | + | chr3_2:5236456-5236475 | None:intergenic | 20.0% |
!!! | GGATTTTACTTTATAGTATT+TGG | - | chr3_2:5236687-5236706 | Msa0392250:CDS | 20.0% |
!! | TTCATATTATATAGGTAGTT+TGG | - | chr3_2:5237111-5237130 | Msa0392250:CDS | 20.0% |
!! | AACATTATTATAAAGTCTTC+TGG | + | chr3_2:5237629-5237648 | None:intergenic | 20.0% |
!! | GAAGACTTTATAATAATGTT+TGG | - | chr3_2:5237629-5237648 | Msa0392250:intron | 20.0% |
!!! | GAATACTATTCTTTAAGATA+CGG | - | chr3_2:5237767-5237786 | Msa0392250:intron | 20.0% |
!! | TGTCTAAAAATGCTTATAAA+AGG | - | chr3_2:5237981-5238000 | Msa0392250:intron | 20.0% |
!! | GTCTAAAAATGCTTATAAAA+GGG | - | chr3_2:5237982-5238001 | Msa0392250:intron | 20.0% |
!! | CATGATTCATTATTTATAGT+AGG | + | chr3_2:5238472-5238491 | None:intergenic | 20.0% |
!!! | ACTATTTCTTTTGTATGATC+TGG | + | chr3_2:5225975-5225994 | None:intergenic | 25.0% |
!!! | AAACTTAGATTGAGTTGAAT+CGG | - | chr3_2:5226397-5226416 | Msa0392250:CDS | 25.0% |
!!! | AAAAATCATGTTTTGAGTCA+AGG | - | chr3_2:5226467-5226486 | Msa0392250:intron | 25.0% |
! | ACATAATATCATTTACAGAG+AGG | + | chr3_2:5226899-5226918 | None:intergenic | 25.0% |
! | CAACGGTTCAAATATTATAA+AGG | + | chr3_2:5228007-5228026 | None:intergenic | 25.0% |
! | TATAATATTTGAACCGTTGT+AGG | - | chr3_2:5228008-5228027 | Msa0392250:CDS | 25.0% |
! | AGTAACTAAAAAACCTACAA+CGG | + | chr3_2:5228024-5228043 | None:intergenic | 25.0% |
! | AATAATAATGAACTCGTATG+TGG | + | chr3_2:5228173-5228192 | None:intergenic | 25.0% |
! | ACTATTTGTTTGTCATGAAT+GGG | + | chr3_2:5228317-5228336 | None:intergenic | 25.0% |
! | TACTATTTGTTTGTCATGAA+TGG | + | chr3_2:5228318-5228337 | None:intergenic | 25.0% |
!!! | ATGTTTACTTTTGCAACAAA+TGG | - | chr3_2:5228531-5228550 | Msa0392250:intron | 25.0% |
! | TATAGGTAGAAGTAAAAGAA+GGG | + | chr3_2:5228796-5228815 | None:intergenic | 25.0% |
! | TTATAGGTAGAAGTAAAAGA+AGG | + | chr3_2:5228797-5228816 | None:intergenic | 25.0% |
! | AGGATTCTTTAAATTTGCAA+CGG | - | chr3_2:5229082-5229101 | Msa0392250:intron | 25.0% |
! | ATTAATGTTGTATTTGCTTC+TGG | - | chr3_2:5229367-5229386 | Msa0392250:intron | 25.0% |
! | TTAATGTTGTATTTGCTTCT+GGG | - | chr3_2:5229368-5229387 | Msa0392250:intron | 25.0% |
!! | CAAAATGTATTTTATGGGAT+TGG | + | chr3_2:5229502-5229521 | None:intergenic | 25.0% |
! | TCAAATTGAATCATACAGTA+AGG | + | chr3_2:5229545-5229564 | None:intergenic | 25.0% |
! | AAGTGGTAAAATTTAAGGAA+TGG | + | chr3_2:5229746-5229765 | None:intergenic | 25.0% |
! | ATCACAAGTGGTAAAATTTA+AGG | + | chr3_2:5229751-5229770 | None:intergenic | 25.0% |
! | AAATTTGACATATTTCGACT+TGG | - | chr3_2:5229832-5229851 | Msa0392250:intron | 25.0% |
! | AATTTGACATATTTCGACTT+GGG | - | chr3_2:5229833-5229852 | Msa0392250:intron | 25.0% |
!!! | TATAAATACCACTCTAAGAT+TGG | - | chr3_2:5229869-5229888 | Msa0392250:intron | 25.0% |
!!! | TAGTATCACAATTTTTTTGC+AGG | + | chr3_2:5229936-5229955 | None:intergenic | 25.0% |
!! | AGTAAAGGAGTATAAAAATG+AGG | + | chr3_2:5230327-5230346 | None:intergenic | 25.0% |
! | GGGAAAAATGAAAAACTTAA+AGG | + | chr3_2:5230415-5230434 | None:intergenic | 25.0% |
! | GAAACGATTCAAAAACTAAA+AGG | + | chr3_2:5230677-5230696 | None:intergenic | 25.0% |
! | TTATGGTCAAATGCATATAA+AGG | + | chr3_2:5230793-5230812 | None:intergenic | 25.0% |
!!! | TCAAATAGTAGTGTTTTTTC+TGG | - | chr3_2:5231115-5231134 | Msa0392250:intron | 25.0% |
! | TTAGTGTTTCTTTCATTCAA+AGG | - | chr3_2:5231319-5231338 | Msa0392250:intron | 25.0% |
! | AAAGTCTCTTTATGATTGTT+TGG | - | chr3_2:5231648-5231667 | Msa0392250:intron | 25.0% |
! | AAGTCTCTTTATGATTGTTT+GGG | - | chr3_2:5231649-5231668 | Msa0392250:intron | 25.0% |
! | TAAACTTAGTAGAAAAAGGA+AGG | + | chr3_2:5231775-5231794 | None:intergenic | 25.0% |
! | TAAGTTTACTTATCTTCGTT+TGG | - | chr3_2:5231787-5231806 | Msa0392250:intron | 25.0% |
! | AATTTGGTCCTATACTATAA+CGG | - | chr3_2:5231943-5231962 | Msa0392250:intron | 25.0% |
!! | AATCTTGTTATAAACTCATC+TGG | + | chr3_2:5231995-5232014 | None:intergenic | 25.0% |
! | GATGAGTTTATAACAAGATT+TGG | - | chr3_2:5231995-5232014 | Msa0392250:intron | 25.0% |
!!! | ACGTTTACTTTTGTAACAAA+TGG | - | chr3_2:5232098-5232117 | Msa0392250:intron | 25.0% |
! | TTTGCAGAATACTATTCTAT+AGG | - | chr3_2:5227357-5227376 | Msa0392250:intron | 25.0% |
! | TTGCAGAATACTATTCTATA+GGG | - | chr3_2:5232128-5232147 | Msa0392250:intron | 25.0% |
!!! | TTTGTACTTTGAGTTTTGAA+TGG | + | chr3_2:5232241-5232260 | None:intergenic | 25.0% |
! | TTCAAAACTCAAAGTACAAA+TGG | - | chr3_2:5232241-5232260 | Msa0392250:CDS | 25.0% |
!!! | GAACAAAAATAAGGGTTTTT+TGG | + | chr3_2:5232400-5232419 | None:intergenic | 25.0% |
! | AATTCTAATGGGAAATTATG+TGG | - | chr3_2:5232423-5232442 | Msa0392250:CDS | 25.0% |
! | ATCTGCAATGATAATATCAA+GGG | - | chr3_2:5232642-5232661 | Msa0392250:intron | 25.0% |
! | GGGATTTACTATATTTCAAA+GGG | - | chr3_2:5232663-5232682 | Msa0392250:intron | 25.0% |
! | GGATTTACTATATTTCAAAG+GGG | - | chr3_2:5232664-5232683 | Msa0392250:intron | 25.0% |
! | TCTATGTTTCATTGCTATAT+TGG | - | chr3_2:5232912-5232931 | Msa0392250:intron | 25.0% |
! | CTATGTTTCATTGCTATATT+GGG | - | chr3_2:5232913-5232932 | Msa0392250:intron | 25.0% |
!!! | ATTGGGATGTTTTTTCTTTT+TGG | - | chr3_2:5232930-5232949 | Msa0392250:intron | 25.0% |
! | TCAAAGATAAATTAAGTGGT+TGG | - | chr3_2:5233210-5233229 | Msa0392250:intron | 25.0% |
! | TAGTAAATGGCATATCTAAA+TGG | - | chr3_2:5233410-5233429 | Msa0392250:intron | 25.0% |
! | AAAAAATGTATCTCTAGTTG+AGG | + | chr3_2:5233844-5233863 | None:intergenic | 25.0% |
! | ATCACAAATAATTCATGGAA+TGG | + | chr3_2:5233870-5233889 | None:intergenic | 25.0% |
! | AGTTTAAACACATGTCAAAT+TGG | - | chr3_2:5234071-5234090 | Msa0392250:intron | 25.0% |
! | AACTTTAAGTGAATCAAATC+TGG | - | chr3_2:5234151-5234170 | Msa0392250:intron | 25.0% |
!!! | TGCGTTACTAATAAGTTTTT+TGG | + | chr3_2:5234264-5234283 | None:intergenic | 25.0% |
! | GTCTCTTCTATAAAATTGAT+TGG | + | chr3_2:5234343-5234362 | None:intergenic | 25.0% |
! | ATGTTTGTATATACATCTAG+CGG | + | chr3_2:5234431-5234450 | None:intergenic | 25.0% |
!! | ATTTCAATCTTTTTATGGGT+TGG | - | chr3_2:5234461-5234480 | Msa0392250:intron | 25.0% |
!! | GAAAATTTGACCAAAAGTAT+TGG | - | chr3_2:5234804-5234823 | Msa0392250:intron | 25.0% |
! | TCATTTGCAACAGAATATTT+GGG | + | chr3_2:5234834-5234853 | None:intergenic | 25.0% |
! | TTCATTTGCAACAGAATATT+TGG | + | chr3_2:5234835-5234854 | None:intergenic | 25.0% |
! | TTCTTATAAATTTGACCAGA+GGG | + | chr3_2:5235252-5235271 | None:intergenic | 25.0% |
! | TTTCTTATAAATTTGACCAG+AGG | + | chr3_2:5235253-5235272 | None:intergenic | 25.0% |
! | CATTGCATAAATGATGTATT+TGG | - | chr3_2:5235291-5235310 | Msa0392250:intron | 25.0% |
!! | CTTTTTCTTATAAATAGGAC+CGG | - | chr3_2:5235364-5235383 | Msa0392250:intron | 25.0% |
! | GATTCATATAAAAAGAAGAG+AGG | + | chr3_2:5235458-5235477 | None:intergenic | 25.0% |
! | AACTTTCAACACATTTCTTT+CGG | - | chr3_2:5235677-5235696 | Msa0392250:intron | 25.0% |
!!! | AAATGTTTTGAATCTTTCTC+CGG | + | chr3_2:5235793-5235812 | None:intergenic | 25.0% |
!! | TATCTTGTTATAAACTCATC+TGG | + | chr3_2:5236305-5236324 | None:intergenic | 25.0% |
! | GATGAGTTTATAACAAGATA+TGG | - | chr3_2:5236305-5236324 | Msa0392250:CDS | 25.0% |
! | GATATTGAACTAAAGAAATG+TGG | - | chr3_2:5236380-5236399 | Msa0392250:intron | 25.0% |
!! | AAGTTTTCTTTTGCAACAAT+TGG | - | chr3_2:5236408-5236427 | Msa0392250:intron | 25.0% |
!! | AGTAATATCCTTTGATCTTT+TGG | + | chr3_2:5236609-5236628 | None:intergenic | 25.0% |
!!! | AACGAAAAGAAGTGTTTATT+GGG | + | chr3_2:5236643-5236662 | None:intergenic | 25.0% |
!! | TTTGAGTTACATTTATGATG+CGG | - | chr3_2:5236724-5236743 | Msa0392250:CDS | 25.0% |
! | TATGACCTTCTTAAAATGTT+TGG | + | chr3_2:5237435-5237454 | None:intergenic | 25.0% |
!! | ACTATTTCTTTGTCATGAAT+GGG | + | chr3_2:5237467-5237486 | None:intergenic | 25.0% |
!! | TACTATTTCTTTGTCATGAA+TGG | + | chr3_2:5237468-5237487 | None:intergenic | 25.0% |
!!! | ATGTTTACTTTTGCAACAAA+TGG | - | chr3_2:5228531-5228550 | Msa0392250:intron | 25.0% |
!! | TGATTTTTGAACGAAAATGA+GGG | + | chr3_2:5238042-5238061 | None:intergenic | 25.0% |
!!! | GAATTTCACTTTCTAGTTTT+TGG | - | chr3_2:5238083-5238102 | Msa0392250:intron | 25.0% |
! | TATTGTGGAGCAAATATATA+AGG | + | chr3_2:5238177-5238196 | None:intergenic | 25.0% |
!! | TTAGAATTTACGAGCTTTAT+AGG | + | chr3_2:5238216-5238235 | None:intergenic | 25.0% |
! | ATAAAGCTCGTAAATTCTAA+TGG | - | chr3_2:5238216-5238235 | Msa0392250:intron | 25.0% |
!! | AGGGATTTTCTCAATTTATA+AGG | - | chr3_2:5238325-5238344 | Msa0392250:intron | 25.0% |
! | TTCATTATTTATAGTAGGGA+GGG | + | chr3_2:5238467-5238486 | None:intergenic | 25.0% |
! | ATTCATTATTTATAGTAGGG+AGG | + | chr3_2:5238468-5238487 | None:intergenic | 25.0% |
! | ATTTCTTTTGTATGATCTGG+AGG | + | chr3_2:5225972-5225991 | None:intergenic | 30.0% |
TAACAATGAATCCAAAACAC+AGG | + | chr3_2:5226296-5226315 | None:intergenic | 30.0% | |
!! | TTTGGAATCATTTTTGTGGA+AGG | + | chr3_2:5226533-5226552 | None:intergenic | 30.0% |
!! | CATGTTTGGAATCATTTTTG+TGG | + | chr3_2:5226537-5226556 | None:intergenic | 30.0% |
GAGAGTAGTTACTTAAATTG+TGG | - | chr3_2:5226578-5226597 | Msa0392250:CDS | 30.0% | |
TCTTTAACTGTGAAACTTTG+AGG | - | chr3_2:5226849-5226868 | Msa0392250:CDS | 30.0% | |
! | TGAATTTGTTTGGACTTTCA+AGG | - | chr3_2:5226946-5226965 | Msa0392250:CDS | 30.0% |
!! | TTAGTGTGTCTTTAGTTCTA+AGG | - | chr3_2:5227007-5227026 | Msa0392250:intron | 30.0% |
!! | TAGTTCTAAGGTTCTCAAAA+TGG | - | chr3_2:5227019-5227038 | Msa0392250:intron | 30.0% |
CTTCAACTAAAGTTCTTGTT+TGG | + | chr3_2:5227082-5227101 | None:intergenic | 30.0% | |
!!! | AACGAAAACAAGGGTTTTTT+GGG | + | chr3_2:5227563-5227582 | None:intergenic | 30.0% |
AAGGGAAAACAATCTATCAA+AGG | - | chr3_2:5227851-5227870 | Msa0392250:intron | 30.0% | |
CTTATCACTTATTGAATTGC+AGG | - | chr3_2:5228238-5228257 | Msa0392250:CDS | 30.0% | |
!! | GGAATCCAAACATTTTAAGA+AGG | - | chr3_2:5228277-5228296 | Msa0392250:CDS | 30.0% |
TATGGCCTTCTTAAAATGTT+TGG | + | chr3_2:5228285-5228304 | None:intergenic | 30.0% | |
TCATCAGTTATACTATGAGA+GGG | + | chr3_2:5228358-5228377 | None:intergenic | 30.0% | |
AAATTGGAATTGAAGAAACG+TGG | - | chr3_2:5228503-5228522 | Msa0392250:intron | 30.0% | |
AATTGGAATTGAAGAAACGT+GGG | - | chr3_2:5228504-5228523 | Msa0392250:intron | 30.0% | |
! | TTTGTTTCTCCATTAGTACT+TGG | + | chr3_2:5228686-5228705 | None:intergenic | 30.0% |
TACTAATGGAGAAACAAACA+CGG | - | chr3_2:5228688-5228707 | Msa0392250:intron | 30.0% | |
AGCATTAATATACTGCACAA+GGG | + | chr3_2:5228946-5228965 | None:intergenic | 30.0% | |
!! | ACGGACAACAATTTGTTAAA+CGG | - | chr3_2:5229101-5229120 | Msa0392250:intron | 30.0% |
TCACCAACTATGACATTATT+AGG | - | chr3_2:5229205-5229224 | Msa0392250:intron | 30.0% | |
! | ATAGAATGCTTTTGCTCATT+TGG | - | chr3_2:5229260-5229279 | Msa0392250:intron | 30.0% |
! | AAAACAGCTACATTTTCTCT+TGG | + | chr3_2:5229318-5229337 | None:intergenic | 30.0% |
GGAAATATTCAGTCCTATTA+AGG | - | chr3_2:5229389-5229408 | Msa0392250:intron | 30.0% | |
TTACATCACTCAACCTTAAT+AGG | + | chr3_2:5229405-5229424 | None:intergenic | 30.0% | |
ATAATCACTGATGGAAAGTT+TGG | - | chr3_2:5229576-5229595 | Msa0392250:intron | 30.0% | |
TTTACCACTTGTGATAAAAG+TGG | - | chr3_2:5229756-5229775 | Msa0392250:intron | 30.0% | |
TTACCACTTGTGATAAAAGT+GGG | - | chr3_2:5229757-5229776 | Msa0392250:intron | 30.0% | |
AAAACTTTCCAATCTTAGAG+TGG | + | chr3_2:5229880-5229899 | None:intergenic | 30.0% | |
CGTTGAAGAATAAACGAATA+AGG | + | chr3_2:5229987-5230006 | None:intergenic | 30.0% | |
AATCAGTCACAATATTCTTG+CGG | - | chr3_2:5230019-5230038 | Msa0392250:intron | 30.0% | |
! | GGGACAAATATTTTCTCTTT+TGG | - | chr3_2:5230097-5230116 | Msa0392250:intron | 30.0% |
!!! | TTTTCTCTTTTGGTAGTGAT+CGG | - | chr3_2:5230107-5230126 | Msa0392250:intron | 30.0% |
TAAAGGTCAAATGCATCTAA+AGG | - | chr3_2:5230388-5230407 | Msa0392250:intron | 30.0% | |
!! | GTTTTTCATTTTTCCCAAAG+TGG | - | chr3_2:5230419-5230438 | Msa0392250:intron | 30.0% |
GAAACTTAAAGAACCACTTT+GGG | + | chr3_2:5230435-5230454 | None:intergenic | 30.0% | |
TGAAACTTAAAGAACCACTT+TGG | + | chr3_2:5230436-5230455 | None:intergenic | 30.0% | |
!! | ACTAATTTTAAGTGGGTGTT+AGG | + | chr3_2:5230570-5230589 | None:intergenic | 30.0% |
!! | ATCTTTTTAGGCATGACAAA+TGG | - | chr3_2:5230591-5230610 | Msa0392250:intron | 30.0% |
! | TTTCAAACAAGTCCTTTTAG+AGG | + | chr3_2:5230661-5230680 | None:intergenic | 30.0% |
!!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr3_2:5230706-5230725 | Msa0392250:intron | 30.0% |
! | TGAAACTTAAAGGACTTGTT+TGG | - | chr3_2:5230716-5230735 | Msa0392250:intron | 30.0% |
! | GAAACTTAAAGGACTTGTTT+GGG | - | chr3_2:5230717-5230736 | Msa0392250:intron | 30.0% |
!!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr3_2:5230706-5230725 | Msa0392250:intron | 30.0% |
GGGAAAAACGAAAAACTTAA+AGG | - | chr3_2:5230766-5230785 | Msa0392250:intron | 30.0% | |
! | GAGTTAGTTTAGTGTATGTT+TGG | - | chr3_2:5231373-5231392 | Msa0392250:intron | 30.0% |
!! | TGTATGTTTGGTTTCACTTT+TGG | - | chr3_2:5231385-5231404 | Msa0392250:intron | 30.0% |
!! | TTTGGTTTCACTTTTGGATA+AGG | - | chr3_2:5231391-5231410 | Msa0392250:intron | 30.0% |
TTGAATTGAAAGTGACTACA+TGG | - | chr3_2:5231537-5231556 | Msa0392250:intron | 30.0% | |
AGTCTCTTTATGATTGTTTG+GGG | - | chr3_2:5231650-5231669 | Msa0392250:intron | 30.0% | |
AATTGAACCAAATCGAAACT+AGG | - | chr3_2:5231866-5231885 | Msa0392250:intron | 30.0% | |
! | AGTATAGGACCAAATTTTAG+AGG | + | chr3_2:5231939-5231958 | None:intergenic | 30.0% |
GAATACTATTCTATAGGGTA+TGG | - | chr3_2:5232133-5232152 | Msa0392250:intron | 30.0% | |
! | TTCATATTTGAAACACAGGA+AGG | + | chr3_2:5232161-5232180 | None:intergenic | 30.0% |
TTCCTGTGTTTCAAATATGA+AGG | - | chr3_2:5232160-5232179 | Msa0392250:intron | 30.0% | |
TCCTGTGTTTCAAATATGAA+GGG | - | chr3_2:5232161-5232180 | Msa0392250:intron | 30.0% | |
CATCTGCAATGATAATATCA+AGG | - | chr3_2:5232641-5232660 | Msa0392250:intron | 30.0% | |
TCTGCAATGATAATATCAAG+GGG | - | chr3_2:5232643-5232662 | Msa0392250:intron | 30.0% | |
GGGGATTTACTATATTTCAA+AGG | - | chr3_2:5232662-5232681 | Msa0392250:intron | 30.0% | |
CAATCACTGTCAAATATGTT+TGG | - | chr3_2:5233099-5233118 | Msa0392250:intron | 30.0% | |
CTAAAGATTGAGCTACAATA+GGG | - | chr3_2:5233279-5233298 | Msa0392250:intron | 30.0% | |
TAAAGATTGAGCTACAATAG+GGG | - | chr3_2:5233280-5233299 | Msa0392250:intron | 30.0% | |
AATGGCATATCTAAATGGAA+TGG | - | chr3_2:5233415-5233434 | Msa0392250:intron | 30.0% | |
GATAACAGACCAAAAAGTTT+AGG | - | chr3_2:5233461-5233480 | Msa0392250:intron | 30.0% | |
! | ACCAAAAAGTTTAGGATCTA+TGG | - | chr3_2:5233469-5233488 | Msa0392250:intron | 30.0% |
! | TCCATAGATCCTAAACTTTT+TGG | + | chr3_2:5233473-5233492 | None:intergenic | 30.0% |
!!! | TTTTTTATACTTGATGGCAG+TGG | + | chr3_2:5233505-5233524 | None:intergenic | 30.0% |
CTGCCATCAAGTATAAAAAA+AGG | - | chr3_2:5233505-5233524 | Msa0392250:intron | 30.0% | |
GGATAGTGACAATGATTAAA+TGG | - | chr3_2:5233534-5233553 | Msa0392250:intron | 30.0% | |
GAAAGTCTCAAGTATCTTAT+GGG | + | chr3_2:5233628-5233647 | None:intergenic | 30.0% | |
TGAAAGTCTCAAGTATCTTA+TGG | + | chr3_2:5233629-5233648 | None:intergenic | 30.0% | |
TAAACACATGTCAAATTGGA+TGG | - | chr3_2:5234075-5234094 | Msa0392250:intron | 30.0% | |
!!! | TCGATCTCTAGAATCAATTT+TGG | - | chr3_2:5234221-5234240 | Msa0392250:intron | 30.0% |
!!! | CGATCTCTAGAATCAATTTT+GGG | - | chr3_2:5234222-5234241 | Msa0392250:intron | 30.0% |
TGTTTGTATATACATCTAGC+GGG | + | chr3_2:5234430-5234449 | None:intergenic | 30.0% | |
TTTAAGTCCAGAGAATGAAA+AGG | - | chr3_2:5234506-5234525 | Msa0392250:intron | 30.0% | |
! | TTTATCTCCTTTTCATTCTC+TGG | + | chr3_2:5234516-5234535 | None:intergenic | 30.0% |
ACTATGTGACTCTGATTTAT+TGG | + | chr3_2:5234636-5234655 | None:intergenic | 30.0% | |
! | GTAATCTTTTAGTCGTTGTT+TGG | + | chr3_2:5234775-5234794 | None:intergenic | 30.0% |
! | TTTGGGAATACCAATACTTT+TGG | + | chr3_2:5234817-5234836 | None:intergenic | 30.0% |
CTTGACAGATACATAATAGT+TGG | + | chr3_2:5234858-5234877 | None:intergenic | 30.0% | |
CAACTATTATGTATCTGTCA+AGG | - | chr3_2:5234856-5234875 | Msa0392250:intron | 30.0% | |
! | TGTGAATGTGTCCAAATTTT+GGG | + | chr3_2:5235077-5235096 | None:intergenic | 30.0% |
! | ATGTGAATGTGTCCAAATTT+TGG | + | chr3_2:5235078-5235097 | None:intergenic | 30.0% |
!! | TATTTTGAGAAGAAAGACAG+AGG | + | chr3_2:5235560-5235579 | None:intergenic | 30.0% |
! | ACTATCTCTTTTGTATGATC+TGG | + | chr3_2:5235838-5235857 | None:intergenic | 30.0% |
AGTTTAACTGTGAAACTTTG+AGG | - | chr3_2:5235910-5235929 | Msa0392250:CDS | 30.0% | |
! | TTGTCACTATTTTGCTTCTT+TGG | - | chr3_2:5236055-5236074 | Msa0392250:CDS | 30.0% |
! | GGACATTCATTTTCATTCTA+AGG | - | chr3_2:5236076-5236095 | Msa0392250:CDS | 30.0% |
! | TACTTAGATTTCAAGTACGA+AGG | - | chr3_2:5236470-5236489 | Msa0392250:intron | 30.0% |
TTTCTTATCCATTCCAAACT+TGG | - | chr3_2:5236540-5236559 | Msa0392250:intron | 30.0% | |
AGATCAAAGGATATTACTTG+TGG | - | chr3_2:5236611-5236630 | Msa0392250:intron | 30.0% | |
!! | GAACGAAAAGAAGTGTTTAT+TGG | + | chr3_2:5236644-5236663 | None:intergenic | 30.0% |
!!! | TGAGAATTTTGAAGCATGAA+CGG | + | chr3_2:5236824-5236843 | None:intergenic | 30.0% |
TTCATGCTTCAAAATTCTCA+AGG | - | chr3_2:5236824-5236843 | Msa0392250:CDS | 30.0% | |
! | TGTTTTCCCTAAGAAATCTA+CGG | + | chr3_2:5236919-5236938 | None:intergenic | 30.0% |
TTTACTTTAAGCTGATCAAG+AGG | - | chr3_2:5236960-5236979 | Msa0392250:intron | 30.0% | |
ACATCAGTTCAGATATTAGA+AGG | + | chr3_2:5237084-5237103 | None:intergenic | 30.0% | |
CTTCTGTTACTAAATACACT+TGG | + | chr3_2:5237178-5237197 | None:intergenic | 30.0% | |
ATGAATAATGAACTCGTATG+TGG | + | chr3_2:5237323-5237342 | None:intergenic | 30.0% | |
CATATCACTTATTGAATTGC+AGG | - | chr3_2:5237388-5237407 | Msa0392250:CDS | 30.0% | |
!! | GGAATCCAAACATTTTAAGA+AGG | - | chr3_2:5228277-5228296 | Msa0392250:CDS | 30.0% |
TCATCAGTTATACTATGAGA+GGG | + | chr3_2:5228358-5228377 | None:intergenic | 30.0% | |
! | AAAATGGACTTGAAGAAATG+TGG | - | chr3_2:5237704-5237723 | Msa0392250:intron | 30.0% |
AAACAAACAATGAGTGTTCT+AGG | - | chr3_2:5237900-5237919 | Msa0392250:intron | 30.0% | |
! | GTGATTTTTGAACGAAAATG+AGG | + | chr3_2:5238043-5238062 | None:intergenic | 30.0% |
! | TTTTCGTTCAAAAATCACCA+CGG | - | chr3_2:5238045-5238064 | Msa0392250:intron | 30.0% |
! | ACATTTAGCTTCAGATATTG+TGG | + | chr3_2:5238192-5238211 | None:intergenic | 30.0% |
TAAATTCTAATGGAGATGAG+TGG | - | chr3_2:5238226-5238245 | Msa0392250:intron | 30.0% | |
AAATTCTAATGGAGATGAGT+GGG | - | chr3_2:5238227-5238246 | Msa0392250:intron | 30.0% | |
AAGATTAGAATCCTATAAGC+AGG | - | chr3_2:5238575-5238594 | Msa0392250:intron | 30.0% | |
!! | AAGTGTTTTGAATCCTTCTC+CGG | + | chr3_2:5225930-5225949 | None:intergenic | 35.0% |
ACTCTAACTGTCAAACTTTG+AGG | - | chr3_2:5226042-5226061 | Msa0392250:three_prime_UTR | 35.0% | |
ATAAATGTGAAACCCCTCTT+TGG | - | chr3_2:5226608-5226627 | Msa0392250:CDS | 35.0% | |
TAGAACCAAACTTCCAAAGA+GGG | + | chr3_2:5226624-5226643 | None:intergenic | 35.0% | |
TTAGAACCAAACTTCCAAAG+AGG | + | chr3_2:5226625-5226644 | None:intergenic | 35.0% | |
GTCTCTAAACTTCAAAAGAG+AGG | + | chr3_2:5227152-5227171 | None:intergenic | 35.0% | |
CAACTCATCTGTTACAGTAT+AGG | + | chr3_2:5227174-5227193 | None:intergenic | 35.0% | |
GATATGGAACTGAAGAAATG+TGG | - | chr3_2:5227300-5227319 | Msa0392250:intron | 35.0% | |
CTTATTCATTCAAAACTCCG+AGG | - | chr3_2:5227463-5227482 | Msa0392250:intron | 35.0% | |
!!! | GTTTTTTGGGTTGATTCCAT+TGG | + | chr3_2:5227550-5227569 | None:intergenic | 35.0% |
!!! | GAACGAAAACAAGGGTTTTT+TGG | + | chr3_2:5227564-5227583 | None:intergenic | 35.0% |
!!! | TGAGAATTTTGGAGCATGAA+CGG | + | chr3_2:5227747-5227766 | None:intergenic | 35.0% |
TTCATGCTCCAAAATTCTCA+AGG | - | chr3_2:5227747-5227766 | Msa0392250:CDS | 35.0% | |
! | ACTGCTTTCCTTGAGAATTT+TGG | + | chr3_2:5227758-5227777 | None:intergenic | 35.0% |
AAAATTCTCAAGGAAAGCAG+TGG | - | chr3_2:5227757-5227776 | Msa0392250:CDS | 35.0% | |
GTGGCAAGTTTCTTGTATAT+CGG | - | chr3_2:5227776-5227795 | Msa0392250:CDS | 35.0% | |
TGGATTCTGTAGATTTGCAA+GGG | - | chr3_2:5227833-5227852 | Msa0392250:CDS | 35.0% | |
GCTATCATCAATGAGCAATA+TGG | - | chr3_2:5228048-5228067 | Msa0392250:CDS | 35.0% | |
TGCGAAAGAAAACACACTTA+GGG | + | chr3_2:5228127-5228146 | None:intergenic | 35.0% | |
TTGCGAAAGAAAACACACTT+AGG | + | chr3_2:5228128-5228147 | None:intergenic | 35.0% | |
ATCACTTATTGAATTGCAGG+CGG | - | chr3_2:5228241-5228260 | Msa0392250:CDS | 35.0% | |
CTCATCAGTTATACTATGAG+AGG | + | chr3_2:5228359-5228378 | None:intergenic | 35.0% | |
AATTTCCAAGTAAGACCATC+AGG | + | chr3_2:5228488-5228507 | None:intergenic | 35.0% | |
! | TGATGGTCTTACTTGGAAAT+TGG | - | chr3_2:5228487-5228506 | Msa0392250:intron | 35.0% |
ATTGGAATTGAAGAAACGTG+GGG | - | chr3_2:5228505-5228524 | Msa0392250:intron | 35.0% | |
TTCCTGTCTTTCGAATATGA+AGG | - | chr3_2:5228593-5228612 | Msa0392250:intron | 35.0% | |
TCCTGTCTTTCGAATATGAA+GGG | - | chr3_2:5228594-5228613 | Msa0392250:intron | 35.0% | |
!!! | TTAGTACTTGGAGTTTTGAG+TGG | + | chr3_2:5228674-5228693 | None:intergenic | 35.0% |
CTCAAAACTCCAAGTACTAA+TGG | - | chr3_2:5228674-5228693 | Msa0392250:intron | 35.0% | |
! | AGCATAATTGATTTCATCCC+TGG | + | chr3_2:5228738-5228757 | None:intergenic | 35.0% |
TACCTATAAGCATAGTACTG+TGG | - | chr3_2:5228808-5228827 | Msa0392250:CDS | 35.0% | |
CAGCATTAATATACTGCACA+AGG | + | chr3_2:5228947-5228966 | None:intergenic | 35.0% | |
! | ATTGCTCTCCATTGCAATTT+TGG | + | chr3_2:5229013-5229032 | None:intergenic | 35.0% |
AAAATTGCAATGGAGAGCAA+TGG | - | chr3_2:5229012-5229031 | Msa0392250:intron | 35.0% | |
AAATTGCAATGGAGAGCAAT+GGG | - | chr3_2:5229013-5229032 | Msa0392250:intron | 35.0% | |
!! | GATGTTTGTTGTACACGTTT+AGG | - | chr3_2:5229035-5229054 | Msa0392250:intron | 35.0% |
GTTAAACGGTGATAAATGCA+AGG | - | chr3_2:5229115-5229134 | Msa0392250:intron | 35.0% | |
GAGCCTAATAATGTCATAGT+TGG | + | chr3_2:5229211-5229230 | None:intergenic | 35.0% | |
TGTAAACCATTGTCTTCCAA+TGG | - | chr3_2:5229420-5229439 | Msa0392250:intron | 35.0% | |
CTTTCCATCAGTGATTATGA+AGG | + | chr3_2:5229574-5229593 | None:intergenic | 35.0% | |
TACCACTTGTGATAAAAGTG+GGG | - | chr3_2:5229758-5229777 | Msa0392250:intron | 35.0% | |
! | GCTCATACTATTGACTAACT+TGG | - | chr3_2:5229786-5229805 | Msa0392250:intron | 35.0% |
ATCAGTCACAATATTCTTGC+GGG | - | chr3_2:5230020-5230039 | Msa0392250:intron | 35.0% | |
TGAACATAGTTCAGTTGGTT+TGG | + | chr3_2:5230159-5230178 | None:intergenic | 35.0% | |
ACTAGTGAACATAGTTCAGT+TGG | + | chr3_2:5230164-5230183 | None:intergenic | 35.0% | |
! | GAGTCTCACAATTTTCTCAA+GGG | + | chr3_2:5230250-5230269 | None:intergenic | 35.0% |
! | AGAGTCTCACAATTTTCTCA+AGG | + | chr3_2:5230251-5230270 | None:intergenic | 35.0% |
CCAACTATGCTATCTACAAT+AGG | + | chr3_2:5230506-5230525 | None:intergenic | 35.0% | |
CCTATTGTAGATAGCATAGT+TGG | - | chr3_2:5230503-5230522 | Msa0392250:intron | 35.0% | |
CATCACCATTATCCTCTAAA+AGG | - | chr3_2:5230646-5230665 | Msa0392250:intron | 35.0% | |
!! | CAAGTCCTTTTAGAGGATAA+TGG | + | chr3_2:5230654-5230673 | None:intergenic | 35.0% |
TGAAACTTAAAGGACGACTT+TGG | - | chr3_2:5230745-5230764 | Msa0392250:intron | 35.0% | |
GAAACTTAAAGGACGACTTT+GGG | - | chr3_2:5230746-5230765 | Msa0392250:intron | 35.0% | |
AACAAGTGAACAAACAATGC+AGG | - | chr3_2:5230935-5230954 | Msa0392250:intron | 35.0% | |
ACTAATTGAGTGCCATGAAT+GGG | + | chr3_2:5231038-5231057 | None:intergenic | 35.0% | |
TACTAATTGAGTGCCATGAA+TGG | + | chr3_2:5231039-5231058 | None:intergenic | 35.0% | |
AACCAGATTCACAAAAGCAA+TGG | + | chr3_2:5231241-5231260 | None:intergenic | 35.0% | |
AATTGAAAGTGACTACATGG+TGG | - | chr3_2:5231540-5231559 | Msa0392250:intron | 35.0% | |
CAATCATAAAGAGACTTTCG+AGG | + | chr3_2:5231646-5231665 | None:intergenic | 35.0% | |
ATGATGACCTGTTCTGTTTA+AGG | - | chr3_2:5231744-5231763 | Msa0392250:intron | 35.0% | |
GGATAAACCTTAAACAGAAC+AGG | + | chr3_2:5231754-5231773 | None:intergenic | 35.0% | |
!! | CTTATCTTCGTTTGGTTCTA+TGG | - | chr3_2:5231795-5231814 | Msa0392250:intron | 35.0% |
TATTGCTCCTAGTTTCGATT+TGG | + | chr3_2:5231876-5231895 | None:intergenic | 35.0% | |
!! | TAGGACCAAATTTTAGAGGA+GGG | + | chr3_2:5231935-5231954 | None:intergenic | 35.0% |
!! | ATAGGACCAAATTTTAGAGG+AGG | + | chr3_2:5231936-5231955 | None:intergenic | 35.0% |
CAGTTCATCCGTTATAGTAT+AGG | + | chr3_2:5231954-5231973 | None:intergenic | 35.0% | |
GAAATGGAACTGAAGAAATG+CGG | - | chr3_2:5232070-5232089 | Msa0392250:intron | 35.0% | |
CCTGTGTTTCAAATATGAAG+GGG | - | chr3_2:5232162-5232181 | Msa0392250:intron | 35.0% | |
AGTGTCATAGTCGTAGAAAA+AGG | - | chr3_2:5232278-5232297 | Msa0392250:CDS | 35.0% | |
AAGTGAGAGTCATGAGAAAA+AGG | - | chr3_2:5232315-5232334 | Msa0392250:CDS | 35.0% | |
AGTGAGAGTCATGAGAAAAA+GGG | - | chr3_2:5232316-5232335 | Msa0392250:CDS | 35.0% | |
TAATGGGAAATTATGTGGTG+AGG | - | chr3_2:5232428-5232447 | Msa0392250:CDS | 35.0% | |
AATGTGCAGTATGTTAATGC+TGG | - | chr3_2:5232514-5232533 | Msa0392250:CDS | 35.0% | |
!!! | TCAGAATTTTGGAGCTTTAC+AGG | + | chr3_2:5232571-5232590 | None:intergenic | 35.0% |
TGTAAAGCTCCAAAATTCTG+AGG | - | chr3_2:5232570-5232589 | Msa0392250:CDS | 35.0% | |
GTAAAGCTCCAAAATTCTGA+GGG | - | chr3_2:5232571-5232590 | Msa0392250:CDS | 35.0% | |
! | CATTGCAGATGATGATGATT+TGG | + | chr3_2:5232632-5232651 | None:intergenic | 35.0% |
! | ATTGTGACTTTTAGCACATC+CGG | + | chr3_2:5232742-5232761 | None:intergenic | 35.0% |
TGTCTCATTCATCATCAAAG+TGG | + | chr3_2:5232814-5232833 | None:intergenic | 35.0% | |
! | ATTCACGTTACACGTTGTTT+TGG | - | chr3_2:5232839-5232858 | Msa0392250:intron | 35.0% |
AATTTCTCAAGCTTCTCGTA+AGG | + | chr3_2:5232975-5232994 | None:intergenic | 35.0% | |
CTCAATCTTTAGCAGAATGT+AGG | + | chr3_2:5233271-5233290 | None:intergenic | 35.0% | |
GCTAAAGATTGAGCTACAAT+AGG | - | chr3_2:5233278-5233297 | Msa0392250:intron | 35.0% | |
TACATAGGTTGTGAGTTTAG+TGG | - | chr3_2:5233328-5233347 | Msa0392250:intron | 35.0% | |
TCTCAAGTATCTTATGGGAT+TGG | + | chr3_2:5233623-5233642 | None:intergenic | 35.0% | |
GAATCAGGAAGTCATTAGTT+TGG | - | chr3_2:5233706-5233725 | Msa0392250:intron | 35.0% | |
TACAACGTCCTAATCATTGT+TGG | - | chr3_2:5233818-5233837 | Msa0392250:intron | 35.0% | |
ATCGACCTAGAAATATTGTG+AGG | - | chr3_2:5233901-5233920 | Msa0392250:intron | 35.0% | |
TCGACCTAGAAATATTGTGA+GGG | - | chr3_2:5233902-5233921 | Msa0392250:intron | 35.0% | |
TGAACCCTCACAATATTTCT+AGG | + | chr3_2:5233909-5233928 | None:intergenic | 35.0% | |
GAAATATTGTGAGGGTTCAA+TGG | - | chr3_2:5233910-5233929 | Msa0392250:intron | 35.0% | |
AGTAACGCACAATTTGAACA+CGG | - | chr3_2:5234275-5234294 | Msa0392250:intron | 35.0% | |
!!! | TTTTTATGGGTTGGTAGCTT+TGG | - | chr3_2:5234470-5234489 | Msa0392250:intron | 35.0% |
!! | TGACTCTGATTTATTGGTTC+AGG | + | chr3_2:5234630-5234649 | None:intergenic | 35.0% |
!! | AGATCGGTTTCTCTTTTCAT+AGG | + | chr3_2:5234665-5234684 | None:intergenic | 35.0% |
! | GTCAAAAGTATGACCATTCT+TGG | - | chr3_2:5234749-5234768 | Msa0392250:intron | 35.0% |
CTATTATGTATCTGTCAAGG+CGG | - | chr3_2:5234859-5234878 | Msa0392250:intron | 35.0% | |
!!! | CCTTCTAATTTTAACTCAGC+CGG | + | chr3_2:5234920-5234939 | None:intergenic | 35.0% |
GAGAAAGAAGAAGAAGAAAC+AGG | + | chr3_2:5234957-5234976 | None:intergenic | 35.0% | |
ATAGTGCTTTCAGATAGACT+TGG | - | chr3_2:5234983-5235002 | Msa0392250:intron | 35.0% | |
! | TGAATGTGTCCAAATTTTGG+GGG | + | chr3_2:5235075-5235094 | None:intergenic | 35.0% |
! | GTGAATGTGTCCAAATTTTG+GGG | + | chr3_2:5235076-5235095 | None:intergenic | 35.0% |
TAAATAAGTAACTCTCCCTC+TGG | - | chr3_2:5235234-5235253 | Msa0392250:intron | 35.0% | |
TTTCTTATAAATAGGACCGG+AGG | - | chr3_2:5235367-5235386 | Msa0392250:intron | 35.0% | |
TTCTTATAAATAGGACCGGA+GGG | - | chr3_2:5235368-5235387 | Msa0392250:intron | 35.0% | |
AATTAAAGAACTACTCCCTC+CGG | + | chr3_2:5235386-5235405 | None:intergenic | 35.0% | |
! | TCTCTTTTGTATGATCTGGA+GGG | + | chr3_2:5235834-5235853 | None:intergenic | 35.0% |
! | ATCTCTTTTGTATGATCTGG+AGG | + | chr3_2:5235835-5235854 | None:intergenic | 35.0% |
GTAAGTTAGTGTATACAGAG+AGG | + | chr3_2:5235963-5235982 | None:intergenic | 35.0% | |
GAACTCATCTATTACACTAC+AGG | + | chr3_2:5236264-5236283 | None:intergenic | 35.0% | |
AATATCCCAATCACAACCAT+CGG | + | chr3_2:5236366-5236385 | None:intergenic | 35.0% | |
ACTAGGAACATACTACACAA+TGG | + | chr3_2:5236768-5236787 | None:intergenic | 35.0% | |
!! | TGTTCCTAGTGAATTTGCTA+AGG | - | chr3_2:5236778-5236797 | Msa0392250:CDS | 35.0% |
AAAATTCTCAAGGAAAGCAG+TGG | - | chr3_2:5227757-5227776 | Msa0392250:CDS | 35.0% | |
AAATTCTCAAGGAAAGCAGT+GGG | - | chr3_2:5227758-5227777 | Msa0392250:CDS | 35.0% | |
ATGGAATCCGTAGATTTCTT+AGG | - | chr3_2:5236909-5236928 | Msa0392250:CDS | 35.0% | |
TGGAATCCGTAGATTTCTTA+GGG | - | chr3_2:5236910-5236929 | Msa0392250:CDS | 35.0% | |
AGGGAAAACAAGTTATCAGA+TGG | - | chr3_2:5236929-5236948 | Msa0392250:intron | 35.0% | |
! | TTTTATTCACTGACACTGCA+TGG | + | chr3_2:5237201-5237220 | None:intergenic | 35.0% |
ATCACTTATTGAATTGCAGG+CGG | - | chr3_2:5228241-5228260 | Msa0392250:CDS | 35.0% | |
CTCATCAGTTATACTATGAG+AGG | + | chr3_2:5228359-5228378 | None:intergenic | 35.0% | |
!! | GGATGGTCTTATTTGGAAAA+TGG | - | chr3_2:5237688-5237707 | Msa0392250:intron | 35.0% |
TTCCTGTCTTTCAAATACGA+AGG | - | chr3_2:5237794-5237813 | Msa0392250:intron | 35.0% | |
TCCTGTCTTTCAAATACGAA+GGG | - | chr3_2:5237795-5237814 | Msa0392250:intron | 35.0% | |
! | CTACTACTTGGAGTTTTTGA+TGG | + | chr3_2:5237875-5237894 | None:intergenic | 35.0% |
TCAAAAACTCCAAGTAGTAG+TGG | - | chr3_2:5237875-5237894 | Msa0392250:intron | 35.0% | |
! | TTTGTTTCTCCACTACTACT+TGG | + | chr3_2:5237887-5237906 | None:intergenic | 35.0% |
AAGTGAGAGTCAAGGAAATA+AGG | - | chr3_2:5237949-5237968 | Msa0392250:intron | 35.0% | |
AAATGCTTATAAAAGGGCAG+AGG | - | chr3_2:5237988-5238007 | Msa0392250:intron | 35.0% | |
! | AACGAAAATGAGGGTTTTTC+GGG | + | chr3_2:5238033-5238052 | None:intergenic | 35.0% |
! | GAACGAAAATGAGGGTTTTT+CGG | + | chr3_2:5238034-5238053 | None:intergenic | 35.0% |
TTTCGTTCAAAAATCACCAC+GGG | - | chr3_2:5238046-5238065 | Msa0392250:intron | 35.0% | |
GGAGGAAAGATCAATTTCAA+TGG | + | chr3_2:5238139-5238158 | None:intergenic | 35.0% | |
ATAAGGAACATACTGCACAA+TGG | + | chr3_2:5238160-5238179 | None:intergenic | 35.0% | |
TATTTGCATTGCTGATGACT+CGG | + | chr3_2:5238301-5238320 | None:intergenic | 35.0% | |
AAAAGTCACGATATTTCGTG+TGG | - | chr3_2:5238413-5238432 | Msa0392250:intron | 35.0% | |
AGAATATTACCACATGTAGC+AGG | + | chr3_2:5238501-5238520 | None:intergenic | 35.0% | |
!!! | TAATGGGTTTTTCTGCTTGT+TGG | - | chr3_2:5238535-5238554 | Msa0392250:intron | 35.0% |
AGAATCCTATAAGCAGGTTT+AGG | - | chr3_2:5238581-5238600 | Msa0392250:intron | 35.0% | |
CAATTCCTAAACCTGCTTAT+AGG | + | chr3_2:5238589-5238608 | None:intergenic | 35.0% | |
TAAGCAGGTTTAGGAATTGT+TGG | - | chr3_2:5238590-5238609 | Msa0392250:intron | 35.0% | |
! | TCTTTTGTATGATCTGGAGG+AGG | + | chr3_2:5225969-5225988 | None:intergenic | 40.0% |
GCTTCAGCTAAGTACATGTT+TGG | + | chr3_2:5226551-5226570 | None:intergenic | 40.0% | |
AGAACCAAACTTCCAAAGAG+GGG | + | chr3_2:5226623-5226642 | None:intergenic | 40.0% | |
ATGGAACTGAAGAAATGTGG+CGG | - | chr3_2:5227303-5227322 | Msa0392250:intron | 40.0% | |
TTCAAAACTCCGAGGACTAA+TGG | - | chr3_2:5227471-5227490 | Msa0392250:intron | 40.0% | |
!! | TTTGGTTCTCCATTAGTCCT+CGG | + | chr3_2:5227483-5227502 | None:intergenic | 40.0% |
CACTGCTTCCAAAAGATCAA+AGG | - | chr3_2:5227518-5227537 | Msa0392250:intron | 40.0% | |
!! | AGGCTTTGGAACGAAAACAA+GGG | + | chr3_2:5227572-5227591 | None:intergenic | 40.0% |
!! | AAGGCTTTGGAACGAAAACA+AGG | + | chr3_2:5227573-5227592 | None:intergenic | 40.0% |
! | TGTTTTCGTTCCAAAGCCTT+TGG | - | chr3_2:5227573-5227592 | Msa0392250:intron | 40.0% |
AGGAACATACTACACAATGG+AGG | + | chr3_2:5227688-5227707 | None:intergenic | 40.0% | |
TCCATTGTGTAGTATGTTCC+TGG | - | chr3_2:5227687-5227706 | Msa0392250:CDS | 40.0% | |
ACCAGGAACATACTACACAA+TGG | + | chr3_2:5227691-5227710 | None:intergenic | 40.0% | |
!! | TGTTCCTGGTGAATTTGCTA+AGG | - | chr3_2:5227701-5227720 | Msa0392250:CDS | 40.0% |
AATCCACTCGTAATTCGCAT+TGG | + | chr3_2:5227819-5227838 | None:intergenic | 40.0% | |
GTGGATTCTGTAGATTTGCA+AGG | - | chr3_2:5227832-5227851 | Msa0392250:CDS | 40.0% | |
ACAACTTTGAGCTGATCAAG+AGG | - | chr3_2:5227883-5227902 | Msa0392250:intron | 40.0% | |
! | GTAACTTGTAACACAGCAAC+AGG | + | chr3_2:5227912-5227931 | None:intergenic | 40.0% |
AGTTATACTATGAGAGGGAG+GGG | + | chr3_2:5228353-5228372 | None:intergenic | 40.0% | |
CAGTTATACTATGAGAGGGA+GGG | + | chr3_2:5228354-5228373 | None:intergenic | 40.0% | |
TCAGTTATACTATGAGAGGG+AGG | + | chr3_2:5228355-5228374 | None:intergenic | 40.0% | |
TCCCTTCATATTCGAAAGAC+AGG | + | chr3_2:5228598-5228617 | None:intergenic | 40.0% | |
CACCACAGTACTATGCTTAT+AGG | + | chr3_2:5228813-5228832 | None:intergenic | 40.0% | |
GTGAAGCTCCAAAATTGCAA+TGG | - | chr3_2:5229002-5229021 | Msa0392250:intron | 40.0% | |
! | CAGCTACATTTTCTCTTGGT+TGG | + | chr3_2:5229314-5229333 | None:intergenic | 40.0% |
CTATTGCCATTGGAAGACAA+TGG | + | chr3_2:5229429-5229448 | None:intergenic | 40.0% | |
CAAGTGCATTCTATTGCCAT+TGG | + | chr3_2:5229439-5229458 | None:intergenic | 40.0% | |
TCCAACAAAGACATCCACTT+TGG | + | chr3_2:5229468-5229487 | None:intergenic | 40.0% | |
TTATGGGATTGGAAGTTGCA+AGG | + | chr3_2:5229491-5229510 | None:intergenic | 40.0% | |
GGTTTGATGTATACCAAAGC+TGG | - | chr3_2:5229597-5229616 | Msa0392250:intron | 40.0% | |
!! | TTAAAGGTTGATGCCAGCTT+TGG | + | chr3_2:5229613-5229632 | None:intergenic | 40.0% |
! | TGATGTTTTCCACCTAGATG+TGG | - | chr3_2:5229664-5229683 | Msa0392250:intron | 40.0% |
!! | AACCCCACTTTTATCACAAG+TGG | + | chr3_2:5229763-5229782 | None:intergenic | 40.0% |
TGCTTCCTTGAACTCATCTT+TGG | - | chr3_2:5230530-5230549 | Msa0392250:intron | 40.0% | |
TGGTACCAAAGATGAGTTCA+AGG | + | chr3_2:5230538-5230557 | None:intergenic | 40.0% | |
CTCATCTTTGGTACCAAATC+TGG | - | chr3_2:5230542-5230561 | Msa0392250:intron | 40.0% | |
AGCAATGGCAAAGAGAGTTT+CGG | + | chr3_2:5231226-5231245 | None:intergenic | 40.0% | |
!! | TGCCATTGCTTTTGTGAATC+TGG | - | chr3_2:5231236-5231255 | Msa0392250:intron | 40.0% |
GCTACAATTACTGTTCCTGA+TGG | - | chr3_2:5232037-5232056 | Msa0392250:intron | 40.0% | |
! | CCCCTTCATATTTGAAACAC+AGG | + | chr3_2:5232165-5232184 | None:intergenic | 40.0% |
TAGTCGTAGAAAAAGGTCCA+AGG | - | chr3_2:5232285-5232304 | Msa0392250:CDS | 40.0% | |
ACTCTCACTTGTTTCAACCT+TGG | + | chr3_2:5232305-5232324 | None:intergenic | 40.0% | |
! | ACATGCTTCTGAAAGAGCAA+AGG | - | chr3_2:5232354-5232373 | Msa0392250:CDS | 40.0% |
! | AATGCTCTCCCTCAGAATTT+TGG | + | chr3_2:5232582-5232601 | None:intergenic | 40.0% |
! | AAAATTCTGAGGGAGAGCAT+TGG | - | chr3_2:5232581-5232600 | Msa0392250:CDS | 40.0% |
!! | AAATTCTGAGGGAGAGCATT+GGG | - | chr3_2:5232582-5232601 | Msa0392250:CDS | 40.0% |
TGAGCTGATCAATAAGAAGC+CGG | - | chr3_2:5232720-5232739 | Msa0392250:intron | 40.0% | |
CATTCATCATCAAAGTGGAG+AGG | + | chr3_2:5232809-5232828 | None:intergenic | 40.0% | |
CACAAGTGCCTATTACTAGT+TGG | + | chr3_2:5232889-5232908 | None:intergenic | 40.0% | |
CGAGAAGCTTGAGAAATTGT+TGG | - | chr3_2:5232977-5232996 | Msa0392250:intron | 40.0% | |
GCTTGAGAAATTGTTGGACT+AGG | - | chr3_2:5232983-5233002 | Msa0392250:intron | 40.0% | |
! | CAATAGGGGAGCACAAAATT+TGG | - | chr3_2:5233294-5233313 | Msa0392250:intron | 40.0% |
AGCACAAAATTTGGCCTGAT+TGG | - | chr3_2:5233303-5233322 | Msa0392250:intron | 40.0% | |
ACAACCTATGTATGCCAATC+AGG | + | chr3_2:5233320-5233339 | None:intergenic | 40.0% | |
TCTAAATGGAATGGCTGAGT+TGG | - | chr3_2:5233424-5233443 | Msa0392250:intron | 40.0% | |
TCAACATGCTTGAGCAGAAA+TGG | - | chr3_2:5233677-5233696 | Msa0392250:intron | 40.0% | |
ATGCTTGAGCAGAAATGGAT+AGG | - | chr3_2:5233682-5233701 | Msa0392250:intron | 40.0% | |
CAGAAATGGATAGGTGAATC+AGG | - | chr3_2:5233691-5233710 | Msa0392250:intron | 40.0% | |
AGTTGAGGCCAACAATGATT+AGG | + | chr3_2:5233829-5233848 | None:intergenic | 40.0% | |
! | GCATGGTGATGAAAAGAGTT+TGG | - | chr3_2:5233936-5233955 | Msa0392250:intron | 40.0% |
AAACCGATCTATCCCAAGAA+AGG | - | chr3_2:5234675-5234694 | Msa0392250:intron | 40.0% | |
AACCGATCTATCCCAAGAAA+GGG | - | chr3_2:5234676-5234695 | Msa0392250:intron | 40.0% | |
TTCCCTTTCTTGGGATAGAT+CGG | + | chr3_2:5234681-5234700 | None:intergenic | 40.0% | |
CTTAGGACATTCCCTTTCTT+GGG | + | chr3_2:5234690-5234709 | None:intergenic | 40.0% | |
TCTTTAACACCTCGTTCCTT+AGG | + | chr3_2:5234707-5234726 | None:intergenic | 40.0% | |
!!! | ATTTTAACTCAGCCGGAATG+AGG | + | chr3_2:5234913-5234932 | None:intergenic | 40.0% |
CCGGCTGAGTTAAAATTAGA+AGG | - | chr3_2:5234917-5234936 | Msa0392250:intron | 40.0% | |
! | GAATGTGTCCAAATTTTGGG+GGG | + | chr3_2:5235074-5235093 | None:intergenic | 40.0% |
AAGAAACAATGAAGACTCGC+CGG | - | chr3_2:5235743-5235762 | Msa0392250:intron | 40.0% | |
! | TCTTTTGTATGATCTGGAGG+GGG | + | chr3_2:5225969-5225988 | None:intergenic | 40.0% |
! | CTCTTTTGTATGATCTGGAG+GGG | + | chr3_2:5235833-5235852 | None:intergenic | 40.0% |
ATATCCCAATCACAACCATC+GGG | + | chr3_2:5236365-5236384 | None:intergenic | 40.0% | |
CTTATCCATTCCAAACTTGG+AGG | - | chr3_2:5236543-5236562 | Msa0392250:intron | 40.0% | |
TTAGTCCTCCAAGTTTGGAA+TGG | + | chr3_2:5236551-5236570 | None:intergenic | 40.0% | |
TTCCAAACTTGGAGGACTAA+TGG | - | chr3_2:5236551-5236570 | Msa0392250:intron | 40.0% | |
CTCTGCTTCCAAAAGATCAA+AGG | - | chr3_2:5236598-5236617 | Msa0392250:intron | 40.0% | |
GTAAAATCCTCACTGCATAG+TGG | + | chr3_2:5236676-5236695 | None:intergenic | 40.0% | |
AGGAACATACTACACAATGG+AGG | + | chr3_2:5227688-5227707 | None:intergenic | 40.0% | |
TGCTCCTTAGCAAATTCACT+AGG | + | chr3_2:5236785-5236804 | None:intergenic | 40.0% | |
TGAAGCATGAACGGAACATT+TGG | + | chr3_2:5236815-5236834 | None:intergenic | 40.0% | |
GTGGGAAGTTTCTTGTGTAT+TGG | - | chr3_2:5236853-5236872 | Msa0392250:CDS | 40.0% | |
TCTTGTGTATTGGATAGACC+AGG | - | chr3_2:5236863-5236882 | Msa0392250:CDS | 40.0% | |
CCATTAGTTATTCGCATTGC+TGG | + | chr3_2:5236893-5236912 | None:intergenic | 40.0% | |
CCAGCAATGCGAATAACTAA+TGG | - | chr3_2:5236890-5236909 | Msa0392250:CDS | 40.0% | |
! | GTAACTTGTAACACCACAAC+AGG | + | chr3_2:5236989-5237008 | None:intergenic | 40.0% |
ACAAGTTACAACGTTTCGCA+CGG | - | chr3_2:5237000-5237019 | Msa0392250:intron | 40.0% | |
GCTACCATCAATGAGCAATA+TGG | - | chr3_2:5237151-5237170 | Msa0392250:CDS | 40.0% | |
TGGTCCATATTGCTCATTGA+TGG | + | chr3_2:5228055-5228074 | None:intergenic | 40.0% | |
! | TTTTCTTCCGCAACATGAAC+CGG | - | chr3_2:5237280-5237299 | Msa0392250:CDS | 40.0% |
CGTTGTTACAGTTACTGTTC+TGG | - | chr3_2:5237667-5237686 | Msa0392250:intron | 40.0% | |
! | GTTACAGTTACTGTTCTGGA+TGG | - | chr3_2:5237671-5237690 | Msa0392250:intron | 40.0% |
!! | CTGTTCTGGATGGTCTTATT+TGG | - | chr3_2:5237681-5237700 | Msa0392250:intron | 40.0% |
TCCCTTCGTATTTGAAAGAC+AGG | + | chr3_2:5237799-5237818 | None:intergenic | 40.0% | |
ACTCTCACTTGTTTCAACCT+TGG | + | chr3_2:5232305-5232324 | None:intergenic | 40.0% | |
GTTGAAACAAGTGAGAGTCA+AGG | - | chr3_2:5232307-5232326 | Msa0392250:CDS | 40.0% | |
!!! | GTTTTTCGGGTTGAATGCAT+TGG | + | chr3_2:5238020-5238039 | None:intergenic | 40.0% |
ATCAGCAATGCAAATAACGC+AGG | - | chr3_2:5238305-5238324 | Msa0392250:intron | 40.0% | |
TCAGCAATGCAAATAACGCA+GGG | - | chr3_2:5238306-5238325 | Msa0392250:intron | 40.0% | |
AGGCAGAACAATCTGTCATA+TGG | - | chr3_2:5238345-5238364 | Msa0392250:intron | 40.0% | |
! | ATCGTGACTTTTAGCACAAC+TGG | + | chr3_2:5238405-5238424 | None:intergenic | 40.0% |
TCTGTGTTTGACTGCTGTAA+TGG | - | chr3_2:5238518-5238537 | Msa0392250:intron | 40.0% | |
CTGTGTTTGACTGCTGTAAT+GGG | - | chr3_2:5238519-5238538 | Msa0392250:intron | 40.0% | |
GGTTTAGGAATTGTTGGACT+AGG | - | chr3_2:5238596-5238615 | Msa0392250:intron | 40.0% | |
! | TGGATGCTTTTGTGCTCTTT+TGG | - | chr3_2:5238665-5238684 | Msa0392250:CDS | 40.0% |
! | GGTTGATTGAGCCTGTGTTT+TGG | - | chr3_2:5226282-5226301 | Msa0392250:CDS | 45.0% |
! | GAAACCCCTCTTTGGAAGTT+TGG | - | chr3_2:5226616-5226635 | Msa0392250:CDS | 45.0% |
GTGCTCGGACACTTTATGTT+TGG | + | chr3_2:5227501-5227520 | None:intergenic | 45.0% | |
!! | GATCTTTTGGAAGCAGTGCT+CGG | + | chr3_2:5227516-5227535 | None:intergenic | 45.0% |
! | GGCAGCATCCTTTGATCTTT+TGG | + | chr3_2:5227529-5227548 | None:intergenic | 45.0% |
AGATCAAAGGATGCTGCCAA+TGG | - | chr3_2:5227531-5227550 | Msa0392250:intron | 45.0% | |
TTTCGTTCCAAAGCCTTTGG+CGG | - | chr3_2:5227576-5227595 | Msa0392250:intron | 45.0% | |
TGCTCCTTAGCAAATTCACC+AGG | + | chr3_2:5227708-5227727 | None:intergenic | 45.0% | |
!! | TAAGGAGCATCTGAAGCCAA+AGG | - | chr3_2:5227719-5227738 | Msa0392250:CDS | 45.0% |
ACACCAATGCGAATTACGAG+TGG | - | chr3_2:5227813-5227832 | Msa0392250:CDS | 45.0% | |
TATTGAATTGCAGGCGGAGA+AGG | - | chr3_2:5228247-5228266 | Msa0392250:CDS | 45.0% | |
TGTTTGTCATGAATGGGCGA+GGG | + | chr3_2:5228311-5228330 | None:intergenic | 45.0% | |
TTGTTTGTCATGAATGGGCG+AGG | + | chr3_2:5228312-5228331 | None:intergenic | 45.0% | |
GTTATACTATGAGAGGGAGG+GGG | + | chr3_2:5228352-5228371 | None:intergenic | 45.0% | |
GCTACAGTTACTGTACCTGA+TGG | - | chr3_2:5228470-5228489 | Msa0392250:intron | 45.0% | |
! | CTGTACCTGATGGTCTTACT+TGG | - | chr3_2:5228480-5228499 | Msa0392250:intron | 45.0% |
! | AAACAAACACGGAGTGTCCA+AGG | - | chr3_2:5228699-5228718 | Msa0392250:intron | 45.0% |
TGCTGATGATTCACCAAGTG+AGG | - | chr3_2:5228754-5228773 | Msa0392250:intron | 45.0% | |
GATTCACCAAGTGAGGATCA+AGG | - | chr3_2:5228761-5228780 | Msa0392250:intron | 45.0% | |
TCTGTTCCTTGATCCTCACT+TGG | + | chr3_2:5228770-5228789 | None:intergenic | 45.0% | |
AGCGAGGACGCATCAATTTA+AGG | + | chr3_2:5228923-5228942 | None:intergenic | 45.0% | |
TGTACACGTTTAGGTCGTTC+AGG | - | chr3_2:5229044-5229063 | Msa0392250:intron | 45.0% | |
CGACGAAGTTGTAACACAAC+TGG | + | chr3_2:5229161-5229180 | None:intergenic | 45.0% | |
TGCACTTGTGTTTGCCAAAG+TGG | - | chr3_2:5229451-5229470 | Msa0392250:intron | 45.0% | |
GCCAAAGTGGATGTCTTTGT+TGG | - | chr3_2:5229464-5229483 | Msa0392250:intron | 45.0% | |
GCTGCCTTCATAATCACTGA+TGG | - | chr3_2:5229567-5229586 | Msa0392250:intron | 45.0% | |
TGAGCTGTTGTACCACATCT+AGG | + | chr3_2:5229679-5229698 | None:intergenic | 45.0% | |
ATACTTCCCTCACCCATTCA+TGG | - | chr3_2:5231023-5231042 | Msa0392250:intron | 45.0% | |
!! | GTCAGCCCTCCTCTAAAATT+TGG | - | chr3_2:5231927-5231946 | Msa0392250:intron | 45.0% |
TGTTCCTGATGGTCGTGATT+GGG | - | chr3_2:5232048-5232067 | Msa0392250:intron | 45.0% | |
ATTTCCCAATCACGACCATC+AGG | + | chr3_2:5232055-5232074 | None:intergenic | 45.0% | |
TGATGGTCGTGATTGGGAAA+TGG | - | chr3_2:5232054-5232073 | Msa0392250:intron | 45.0% | |
AGGGGCAACAATCTGTCTTA+TGG | - | chr3_2:5232682-5232701 | Msa0392250:intron | 45.0% | |
GGATCGCACCAACTAGTAAT+AGG | - | chr3_2:5232878-5232897 | Msa0392250:intron | 45.0% | |
TTGGCCTGATTGGCATACAT+AGG | - | chr3_2:5233313-5233332 | Msa0392250:intron | 45.0% | |
GTTTAGTGGAAGAGTGAGCA+TGG | - | chr3_2:5233342-5233361 | Msa0392250:intron | 45.0% | |
TATTGTGAGGGTTCAATGGC+TGG | - | chr3_2:5233914-5233933 | Msa0392250:intron | 45.0% | |
CCTTAGGACATTCCCTTTCT+TGG | + | chr3_2:5234691-5234710 | None:intergenic | 45.0% | |
CCAAGAAAGGGAATGTCCTA+AGG | - | chr3_2:5234688-5234707 | Msa0392250:intron | 45.0% | |
AGTCGTTGTTTGGCCAAGAA+TGG | + | chr3_2:5234765-5234784 | None:intergenic | 45.0% | |
!!! | GGCTTTGGAGGTACCTTTTT+GGG | - | chr3_2:5234880-5234899 | Msa0392250:intron | 45.0% |
TACCTCATCCCCCCAAAATT+TGG | - | chr3_2:5235063-5235082 | Msa0392250:intron | 45.0% | |
TTTGAATCTTTCTCCGGCTC+CGG | + | chr3_2:5235787-5235806 | None:intergenic | 45.0% | |
AGATGAGTTCCTATCACTGC+AGG | - | chr3_2:5236274-5236293 | Msa0392250:intron | 45.0% | |
GATGAGTTCCTATCACTGCA+GGG | - | chr3_2:5236275-5236294 | Msa0392250:intron | 45.0% | |
GCTACAATTACTGTTCCCGA+TGG | - | chr3_2:5236347-5236366 | Msa0392250:CDS | 45.0% | |
TGTTCCCGATGGTTGTGATT+GGG | - | chr3_2:5236358-5236377 | Msa0392250:intron | 45.0% | |
CTCCATTAGTCCTCCAAGTT+TGG | + | chr3_2:5236556-5236575 | None:intergenic | 45.0% | |
GAGCTCGGACACTTTATGTT+TGG | + | chr3_2:5236581-5236600 | None:intergenic | 45.0% | |
!! | GATCTTTTGGAAGCAGAGCT+CGG | + | chr3_2:5236596-5236615 | None:intergenic | 45.0% |
!!! | ATTCGCATTGCTGGTTTTCC+TGG | + | chr3_2:5236884-5236903 | None:intergenic | 45.0% |
AAAACACACTCTCGCACTTG+GGG | + | chr3_2:5237264-5237283 | None:intergenic | 45.0% | |
GAAAACACACTCTCGCACTT+GGG | + | chr3_2:5237265-5237284 | None:intergenic | 45.0% | |
AGAAAACACACTCTCGCACT+TGG | + | chr3_2:5237266-5237285 | None:intergenic | 45.0% | |
! | TATGTGGTGTGACTTGTGAG+TGG | + | chr3_2:5237307-5237326 | None:intergenic | 45.0% |
TATTGAATTGCAGGCGGAGA+AGG | - | chr3_2:5228247-5228266 | Msa0392250:CDS | 45.0% | |
TCTTTGTCATGAATGGGCGA+GGG | + | chr3_2:5237461-5237480 | None:intergenic | 45.0% | |
TTCTTTGTCATGAATGGGCG+AGG | + | chr3_2:5237462-5237481 | None:intergenic | 45.0% | |
! | AACAATGAGTGTTCTAGGCC+TGG | - | chr3_2:5237905-5237924 | Msa0392250:intron | 45.0% |
! | ACAATGAGTGTTCTAGGCCT+GGG | - | chr3_2:5237906-5237925 | Msa0392250:intron | 45.0% |
AGGAACATACTGCACAATGG+AGG | + | chr3_2:5238157-5238176 | None:intergenic | 45.0% | |
!! | GGCTTTATGCGTTGATGATC+TGG | + | chr3_2:5238280-5238299 | None:intergenic | 45.0% |
TTGTGTGTTTGAGCTGATCC+AGG | - | chr3_2:5238374-5238393 | Msa0392250:intron | 45.0% | |
ATGATGTTGCCTGCTACATG+TGG | - | chr3_2:5238489-5238508 | Msa0392250:intron | 45.0% | |
!!! | AAAAATATAATTAATCTTTT+TGG | - | chr3_2:5226799-5226818 | Msa0392250:intron | 5.0% |
!! | AAAAATAGTATAAAAAATAA+AGG | - | chr3_2:5230371-5230390 | Msa0392250:intron | 5.0% |
!!! | ATTATATAGTATTTTATTTA+TGG | + | chr3_2:5230810-5230829 | None:intergenic | 5.0% |
!! | TATTAATTAATTAATGTATT+TGG | + | chr3_2:5235330-5235349 | None:intergenic | 5.0% |
TTTGAATCCTTCTCCGGCGA+CGG | + | chr3_2:5225924-5225943 | None:intergenic | 50.0% | |
GCTACCATTACTGTTCCCGA+TGG | - | chr3_2:5227267-5227286 | Msa0392250:intron | 50.0% | |
ACGACCATCGGGAACAGTAA+TGG | + | chr3_2:5227274-5227293 | None:intergenic | 50.0% | |
ATATCCCACTCACGACCATC+GGG | + | chr3_2:5227285-5227304 | None:intergenic | 50.0% | |
CATATCCCACTCACGACCAT+CGG | + | chr3_2:5227286-5227305 | None:intergenic | 50.0% | |
TGGAGCATGAACGGAACCTT+TGG | + | chr3_2:5227738-5227757 | None:intergenic | 50.0% | |
ACAAGTTACTGCGTCTCGCA+CGG | - | chr3_2:5227923-5227942 | Msa0392250:intron | 50.0% | |
TATGTGGCGTGACGTGTGAA+CGG | + | chr3_2:5228157-5228176 | None:intergenic | 50.0% | |
ATGAATGGGCGAGGGAAGTA+TGG | + | chr3_2:5228303-5228322 | None:intergenic | 50.0% | |
GGAATTGAAGAAACGTGGGG+AGG | - | chr3_2:5228508-5228527 | Msa0392250:intron | 50.0% | |
AGTGTCCAAGGCCTAGGAAA+AGG | - | chr3_2:5228711-5228730 | Msa0392250:intron | 50.0% | |
AAGGCCTAGGAAAAGGTCCA+GGG | - | chr3_2:5228718-5228737 | Msa0392250:intron | 50.0% | |
! | TCATCCCTGGACCTTTTCCT+AGG | + | chr3_2:5228725-5228744 | None:intergenic | 50.0% |
ATATACTGCACAAGGGAGCG+AGG | + | chr3_2:5228939-5228958 | None:intergenic | 50.0% | |
GCTGTTGTACCACATCTAGG+TGG | + | chr3_2:5229676-5229695 | None:intergenic | 50.0% | |
TGGGTGTTAGGAGCCAGATT+TGG | + | chr3_2:5230558-5230577 | None:intergenic | 50.0% | |
AACAAACAATGCAGGCTCGC+CGG | - | chr3_2:5230943-5230962 | Msa0392250:intron | 50.0% | |
TTGAAATCTTTCTCCGCCGC+CGG | + | chr3_2:5230987-5231006 | None:intergenic | 50.0% | |
TGAGTGCCATGAATGGGTGA+GGG | + | chr3_2:5231032-5231051 | None:intergenic | 50.0% | |
TTGAGTGCCATGAATGGGTG+AGG | + | chr3_2:5231033-5231052 | None:intergenic | 50.0% | |
CTGTTCCTGATGGTCGTGAT+TGG | - | chr3_2:5232047-5232066 | Msa0392250:intron | 50.0% | |
! | CTTGATGGCAGTGGCATTGA+TGG | + | chr3_2:5233496-5233515 | None:intergenic | 50.0% |
CCAGGTGGAGAACAGAAAGT+TGG | + | chr3_2:5233786-5233805 | None:intergenic | 50.0% | |
CCAACTTTCTGTTCTCCACC+TGG | - | chr3_2:5233783-5233802 | Msa0392250:intron | 50.0% | |
TTCTGTTCTCCACCTGGATG+TGG | - | chr3_2:5233789-5233808 | Msa0392250:intron | 50.0% | |
GTTGTACCTGTTCCACATCC+AGG | + | chr3_2:5233804-5233823 | None:intergenic | 50.0% | |
AGGGAATGTCCTAAGGAACG+AGG | - | chr3_2:5234695-5234714 | Msa0392250:intron | 50.0% | |
TGTATCTGTCAAGGCGGCTT+TGG | - | chr3_2:5234865-5234884 | Msa0392250:intron | 50.0% | |
!!! | CGGCTTTGGAGGTACCTTTT+TGG | - | chr3_2:5234879-5234898 | Msa0392250:intron | 50.0% |
ATGAGGACTCGTGCCCAAAA+AGG | + | chr3_2:5234896-5234915 | None:intergenic | 50.0% | |
AGTCTTCCATCTCAAGCCAC+TGG | - | chr3_2:5235008-5235027 | Msa0392250:intron | 50.0% | |
TGAGGTAGAAGAGGAGATGG+AGG | + | chr3_2:5235050-5235069 | None:intergenic | 50.0% | |
GGATGAGGTAGAAGAGGAGA+TGG | + | chr3_2:5235053-5235072 | None:intergenic | 50.0% | |
!! | GTCCAAATTTTGGGGGGATG+AGG | + | chr3_2:5235068-5235087 | None:intergenic | 50.0% |
CTGGAATTCCCTGCAGTGAT+AGG | + | chr3_2:5236286-5236305 | None:intergenic | 50.0% | |
CTGTTCCCGATGGTTGTGAT+TGG | - | chr3_2:5236357-5236376 | Msa0392250:intron | 50.0% | |
AATCCTCACTGCATAGTGGC+TGG | + | chr3_2:5236672-5236691 | None:intergenic | 50.0% | |
GATCAAGAGGAAGCCTGTTG+TGG | - | chr3_2:5227896-5227915 | Msa0392250:intron | 50.0% | |
GGACTTGAAGAAATGTGGCG+AGG | - | chr3_2:5237709-5237728 | Msa0392250:intron | 50.0% | |
! | AGTGTTCTAGGCCTGGGAAA+AGG | - | chr3_2:5237912-5237931 | Msa0392250:intron | 50.0% |
! | TCAACCTTGGACCTTTTCCC+AGG | + | chr3_2:5237926-5237945 | None:intergenic | 50.0% |
AATCACCACGGGAAGACATG+CGG | - | chr3_2:5238057-5238076 | Msa0392250:intron | 50.0% | |
TTAGCACAACTGGACTCTCC+TGG | + | chr3_2:5238395-5238414 | None:intergenic | 50.0% | |
GCGACGGAACACATCTTCTC+CGG | + | chr3_2:5225908-5225927 | None:intergenic | 55.0% | |
GAGAAGATGTGTTCCGTCGC+CGG | - | chr3_2:5225908-5225927 | Msa0392250:three_prime_UTR | 55.0% | |
TGTTCCCGATGGTCGTGAGT+GGG | - | chr3_2:5227278-5227297 | Msa0392250:intron | 55.0% | |
CGATGGTCGTGAGTGGGATA+TGG | - | chr3_2:5227284-5227303 | Msa0392250:intron | 55.0% | |
TCTTACTGCACAGCCGCCAA+AGG | + | chr3_2:5227592-5227611 | None:intergenic | 55.0% | |
GAATTGCAGGCGGAGAAGGA+AGG | - | chr3_2:5228251-5228270 | Msa0392250:CDS | 55.0% | |
! | CTGGACCTTTTCCTAGGCCT+TGG | + | chr3_2:5228719-5228738 | None:intergenic | 55.0% |
CAAGGCCTAGGAAAAGGTCC+AGG | - | chr3_2:5228717-5228736 | Msa0392250:intron | 55.0% | |
AGGTCGTTCAGGACTGCGAT+TGG | - | chr3_2:5229055-5229074 | Msa0392250:intron | 55.0% | |
GGTCGTTCAGGACTGCGATT+GGG | - | chr3_2:5229056-5229075 | Msa0392250:intron | 55.0% | |
GTCGTTCAGGACTGCGATTG+GGG | - | chr3_2:5229057-5229076 | Msa0392250:intron | 55.0% | |
TCAGGACTGCGATTGGGGAA+AGG | - | chr3_2:5229062-5229081 | Msa0392250:intron | 55.0% | |
TCTCCACCTGGATGTGGAAC+AGG | - | chr3_2:5233795-5233814 | Msa0392250:intron | 55.0% | |
GTACCTGTTCCACATCCAGG+TGG | + | chr3_2:5233801-5233820 | None:intergenic | 55.0% | |
TGAGGGTTCAATGGCTGGCA+TGG | - | chr3_2:5233919-5233938 | Msa0392250:intron | 55.0% | |
! | ATCTGTCAAGGCGGCTTTGG+AGG | - | chr3_2:5234868-5234887 | Msa0392250:intron | 55.0% |
TTGGGCACGAGTCCTCATTC+CGG | - | chr3_2:5234898-5234917 | Msa0392250:intron | 55.0% | |
CCATGACCAGTGGCTTGAGA+TGG | + | chr3_2:5235017-5235036 | None:intergenic | 55.0% | |
CCATCTCAAGCCACTGGTCA+TGG | - | chr3_2:5235014-5235033 | Msa0392250:intron | 55.0% | |
ACACTCTCAGCCATGACCAG+TGG | + | chr3_2:5235027-5235046 | None:intergenic | 55.0% | |
TTGGGGGGATGAGGTAGAAG+AGG | + | chr3_2:5235059-5235078 | None:intergenic | 55.0% | |
GCGACGGAACACATCTTCTC+CGG | + | chr3_2:5225908-5225927 | None:intergenic | 55.0% | |
GAGAAGATGTGTTCCGTCGC+CGG | - | chr3_2:5225908-5225927 | Msa0392250:three_prime_UTR | 55.0% | |
!! | CACTGCATAGTGGCTGGCTT+TGG | + | chr3_2:5236666-5236685 | None:intergenic | 55.0% |
AAGCCAGCCACTATGCAGTG+AGG | - | chr3_2:5236666-5236685 | Msa0392250:intron | 55.0% | |
GAGTGGTCCGGTTCATGTTG+CGG | + | chr3_2:5237290-5237309 | None:intergenic | 55.0% | |
! | GGTGTGACTTGTGAGTGGTC+CGG | + | chr3_2:5237302-5237321 | None:intergenic | 55.0% |
TGCAGGCGGAGAAGGAAGTT+AGG | - | chr3_2:5237405-5237424 | Msa0392250:intron | 55.0% | |
GCAGGCGGAGAAGGAAGTTA+GGG | - | chr3_2:5237406-5237425 | Msa0392250:intron | 55.0% | |
TAGGCCTGGGAAAAGGTCCA+AGG | - | chr3_2:5237919-5237938 | Msa0392250:intron | 55.0% | |
ATGTGTTCCGTCGCCGGAGA+AGG | - | chr3_2:5225914-5225933 | Msa0392250:three_prime_UTR | 60.0% | |
CTGTTCCCGATGGTCGTGAG+TGG | - | chr3_2:5227277-5227296 | Msa0392250:intron | 60.0% | |
TGCACAGCCGCCAAAGGCTT+TGG | + | chr3_2:5227586-5227605 | None:intergenic | 60.0% | |
TGCAGGCGGAGAAGGAAGGT+AGG | - | chr3_2:5228255-5228274 | Msa0392250:CDS | 60.0% | |
GCAGGCGGAGAAGGAAGGTA+GGG | - | chr3_2:5228256-5228275 | Msa0392250:CDS | 60.0% | |
! | ACACGGAGTGTCCAAGGCCT+AGG | - | chr3_2:5228705-5228724 | Msa0392250:intron | 60.0% |
GTGGCAGGACAGAGCTTCTC+CGG | + | chr3_2:5230965-5230984 | None:intergenic | 60.0% | |
GAGAAGCTCTGTCCTGCCAC+CGG | - | chr3_2:5230965-5230984 | Msa0392250:intron | 60.0% | |
AAATCTTTCTCCGCCGCCGG+TGG | + | chr3_2:5230984-5231003 | None:intergenic | 60.0% | |
TCTCACCGCATGTCTTCCCG+TGG | + | chr3_2:5238065-5238084 | None:intergenic | 60.0% | |
AAGCTCTGTCCTGCCACCGG+CGG | - | chr3_2:5230968-5230987 | Msa0392250:intron | 65.0% | |
ATGTGTTCCGTCGCCGGAGC+CGG | - | chr3_2:5235771-5235790 | Msa0392250:intron | 65.0% | |
TCTTTCTCCGGCTCCGGCGA+CGG | + | chr3_2:5235781-5235800 | None:intergenic | 65.0% | |
CTCTGTCCTGCCACCGGCGG+CGG | - | chr3_2:5230971-5230990 | Msa0392250:intron | 75.0% | |
CTTTCTCCGCCGCCGGTGGC+AGG | + | chr3_2:5230980-5230999 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 5225894 | 5238735 | 5225894 | ID=Msa0392250;Name=Msa0392250 |
chr3_2 | mRNA | 5225894 | 5238735 | 5225894 | ID=Msa0392250-mRNA-1;Parent=Msa0392250;Name=Msa0392250-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.41|0.22|1|0.52|0.27|18|283|1080 |
chr3_2 | exon | 5225894 | 5226461 | 5225894 | ID=Msa0392250-mRNA-1:exon:1329;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5226551 | 5226797 | 5226551 | ID=Msa0392250-mRNA-1:exon:1328;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5226831 | 5227009 | 5226831 | ID=Msa0392250-mRNA-1:exon:1327;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5227145 | 5227219 | 5227145 | ID=Msa0392250-mRNA-1:exon:1326;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5227608 | 5227853 | 5227608 | ID=Msa0392250-mRNA-1:exon:1325;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5227947 | 5228152 | 5227947 | ID=Msa0392250-mRNA-1:exon:1324;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5228165 | 5228333 | 5228165 | ID=Msa0392250-mRNA-1:exon:1323;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5228774 | 5228872 | 5228774 | ID=Msa0392250-mRNA-1:exon:1322;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5232185 | 5232400 | 5232185 | ID=Msa0392250-mRNA-1:exon:1321;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5232416 | 5232643 | 5232416 | ID=Msa0392250-mRNA-1:exon:1320;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5233574 | 5233672 | 5233574 | ID=Msa0392250-mRNA-1:exon:1319;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5235800 | 5235967 | 5235800 | ID=Msa0392250-mRNA-1:exon:1318;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5235983 | 5236210 | 5235983 | ID=Msa0392250-mRNA-1:exon:1317;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5236295 | 5236369 | 5236295 | ID=Msa0392250-mRNA-1:exon:1316;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5236685 | 5236930 | 5236685 | ID=Msa0392250-mRNA-1:exon:1315;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5237024 | 5237232 | 5237024 | ID=Msa0392250-mRNA-1:exon:1314;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5237245 | 5237413 | 5237245 | ID=Msa0392250-mRNA-1:exon:1313;Parent=Msa0392250-mRNA-1 |
chr3_2 | exon | 5238637 | 5238735 | 5238637 | ID=Msa0392250-mRNA-1:exon:1312;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5238637 | 5238735 | 5238637 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5237245 | 5237413 | 5237245 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5237024 | 5237232 | 5237024 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5236685 | 5236930 | 5236685 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5236295 | 5236369 | 5236295 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5235983 | 5236210 | 5235983 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5235800 | 5235967 | 5235800 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5233574 | 5233672 | 5233574 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5232416 | 5232643 | 5232416 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5232185 | 5232400 | 5232185 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5228774 | 5228872 | 5228774 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5228165 | 5228333 | 5228165 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5227947 | 5228152 | 5227947 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5227608 | 5227853 | 5227608 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5227145 | 5227219 | 5227145 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5226831 | 5227009 | 5226831 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5226551 | 5226797 | 5226551 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | CDS | 5226177 | 5226461 | 5226177 | ID=Msa0392250-mRNA-1:cds;Parent=Msa0392250-mRNA-1 |
chr3_2 | three_prime_UTR | 5225894 | 5226176 | 5225894 | ID=Msa0392250-mRNA-1:three_prime_utr;Parent=Msa0392250-mRNA-1 |
Gene Sequence |
Protein sequence |