Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0393560 | XP_003598319.2 | 53.022 | 364 | 63 | 8 | 64 | 324 | 35 | 393 | 4.39e-73 | 254 |
Msa0393560 | XP_003598319.2 | 71.074 | 121 | 14 | 1 | 321 | 420 | 517 | 637 | 5.64e-42 | 169 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0393560 | sp|A2YBX5|G11A_ORYSI | 49.587 | 121 | 36 | 1 | 325 | 420 | 299 | 419 | 5.94e-30 | 125 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0393560 | G7J0G5 | 53.022 | 364 | 63 | 8 | 64 | 324 | 35 | 393 | 2.10e-73 | 254 |
Msa0393560 | G7J0G5 | 71.074 | 121 | 14 | 1 | 321 | 420 | 517 | 637 | 2.70e-42 | 169 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0393560 | MtrunA17_Chr3g0080101 | 53.022 | 364 | 63 | 8 | 64 | 324 | 35 | 393 | 4.04e-77 | 254 |
Msa0393560 | MtrunA17_Chr3g0080101 | 71.074 | 121 | 14 | 1 | 321 | 420 | 517 | 637 | 5.19e-46 | 169 |
Msa0393560 | MtrunA17_Chr1g0179101 | 61.207 | 116 | 24 | 2 | 325 | 420 | 576 | 690 | 1.03e-34 | 137 |
Msa0393560 | MtrunA17_Chr1g0179101 | 47.423 | 97 | 46 | 1 | 65 | 156 | 47 | 143 | 4.26e-15 | 77.8 |
Msa0393560 | MtrunA17_Chr7g0266031 | 58.261 | 115 | 29 | 1 | 325 | 420 | 598 | 712 | 2.40e-32 | 129 |
Msa0393560 | MtrunA17_Chr7g0266031 | 42.708 | 96 | 50 | 1 | 65 | 155 | 49 | 144 | 8.22e-14 | 73.6 |
Msa0393560 | MtrunA17_Chr6g0449401 | 54.310 | 116 | 35 | 2 | 323 | 420 | 404 | 519 | 8.91e-32 | 127 |
Msa0393560 | MtrunA17_Chr2g0290691 | 53.719 | 121 | 31 | 3 | 325 | 420 | 310 | 430 | 1.22e-30 | 124 |
Msa0393560 | MtrunA17_Chr7g0227331 | 52.066 | 121 | 33 | 2 | 325 | 420 | 338 | 458 | 1.93e-27 | 114 |
Msa0393560 | MtrunA17_Chr7g0250631 | 51.754 | 114 | 37 | 2 | 325 | 420 | 470 | 583 | 1.04e-26 | 112 |
Msa0393560 | MtrunA17_Chr8g0356291 | 50.893 | 112 | 35 | 3 | 325 | 417 | 233 | 343 | 5.79e-25 | 107 |
Msa0393560 | MtrunA17_Chr8g0335351 | 50.435 | 115 | 38 | 2 | 325 | 420 | 476 | 590 | 7.22e-25 | 107 |
Msa0393560 | MtrunA17_Chr2g0309421 | 50.847 | 118 | 39 | 3 | 317 | 416 | 273 | 389 | 2.24e-24 | 105 |
Msa0393560 | MtrunA17_Chr4g0063311 | 62.667 | 75 | 20 | 1 | 316 | 382 | 185 | 259 | 1.24e-22 | 99.8 |
Msa0393560 | MtrunA17_Chr2g0285711 | 59.459 | 74 | 26 | 2 | 325 | 396 | 193 | 264 | 2.93e-20 | 92.4 |
Msa0393560 | MtrunA17_Chr2g0321101 | 78.723 | 47 | 10 | 0 | 325 | 371 | 198 | 244 | 2.21e-19 | 90.1 |
Msa0393560 | MtrunA17_Chr8g0369091 | 61.017 | 59 | 23 | 0 | 325 | 383 | 703 | 761 | 6.32e-19 | 89.4 |
Msa0393560 | MtrunA17_Chr2g0312641 | 48.421 | 95 | 41 | 2 | 325 | 415 | 200 | 290 | 2.68e-18 | 86.7 |
Msa0393560 | MtrunA17_Chr8g0381091 | 68.627 | 51 | 16 | 0 | 325 | 375 | 189 | 239 | 3.99e-18 | 86.3 |
Msa0393560 | MtrunA17_Chr2g0327561 | 55.000 | 60 | 27 | 0 | 325 | 384 | 732 | 791 | 2.10e-16 | 81.6 |
Msa0393560 | MtrunA17_Chr4g0030361 | 50.000 | 70 | 35 | 0 | 325 | 394 | 413 | 482 | 1.63e-15 | 78.6 |
Msa0393560 | MtrunA17_Chr8g0338741 | 68.182 | 44 | 14 | 0 | 325 | 368 | 134 | 177 | 2.31e-15 | 77.4 |
Msa0393560 | MtrunA17_Chr7g0234641 | 68.182 | 44 | 14 | 0 | 325 | 368 | 124 | 167 | 1.18e-14 | 75.5 |
Msa0393560 | MtrunA17_Chr2g0329011 | 61.364 | 44 | 17 | 0 | 325 | 368 | 120 | 163 | 3.04e-13 | 70.9 |
Msa0393560 | MtrunA17_Chr4g0032761 | 55.357 | 56 | 23 | 1 | 325 | 380 | 126 | 179 | 3.08e-13 | 70.9 |
Msa0393560 | MtrunA17_Chr6g0478601 | 49.206 | 63 | 32 | 0 | 312 | 374 | 200 | 262 | 3.12e-12 | 68.2 |
Msa0393560 | MtrunA17_Chr5g0428981 | 57.143 | 49 | 21 | 0 | 326 | 374 | 866 | 914 | 8.44e-12 | 67.4 |
Msa0393560 | MtrunA17_Chr4g0018201 | 55.102 | 49 | 22 | 0 | 326 | 374 | 862 | 910 | 1.27e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0393560 | AT3G52890.2 | 56.075 | 107 | 25 | 1 | 325 | 409 | 642 | 748 | 5.75e-29 | 120 |
Msa0393560 | AT3G52890.4 | 56.075 | 107 | 25 | 1 | 325 | 409 | 642 | 748 | 5.75e-29 | 120 |
Msa0393560 | AT3G52890.1 | 56.075 | 107 | 25 | 1 | 325 | 409 | 642 | 748 | 5.75e-29 | 120 |
Msa0393560 | AT3G52890.3 | 56.075 | 107 | 25 | 1 | 325 | 409 | 642 | 748 | 5.75e-29 | 120 |
Msa0393560 | AT2G36350.1 | 54.386 | 114 | 31 | 2 | 315 | 407 | 653 | 766 | 8.55e-29 | 119 |
Msa0393560 | AT2G36350.1 | 38.750 | 160 | 57 | 5 | 64 | 182 | 45 | 204 | 8.28e-14 | 73.9 |
Msa0393560 | AT1G79250.1 | 56.410 | 117 | 30 | 3 | 325 | 420 | 250 | 366 | 1.90e-28 | 117 |
Msa0393560 | AT1G79250.3 | 56.410 | 117 | 30 | 3 | 325 | 420 | 250 | 366 | 1.90e-28 | 117 |
Msa0393560 | AT1G79250.2 | 56.410 | 117 | 30 | 3 | 325 | 420 | 250 | 366 | 1.90e-28 | 117 |
Msa0393560 | AT1G79250.4 | 56.410 | 117 | 30 | 3 | 325 | 420 | 250 | 366 | 1.90e-28 | 117 |
Msa0393560 | AT5G47750.1 | 51.261 | 119 | 35 | 2 | 325 | 420 | 295 | 413 | 5.57e-28 | 116 |
Msa0393560 | AT3G27580.2 | 53.719 | 121 | 27 | 4 | 325 | 420 | 286 | 402 | 1.32e-27 | 115 |
Msa0393560 | AT3G27580.1 | 53.719 | 121 | 27 | 4 | 325 | 420 | 286 | 402 | 1.32e-27 | 115 |
Msa0393560 | AT5G03640.2 | 64.368 | 87 | 18 | 2 | 325 | 398 | 645 | 731 | 9.05e-27 | 113 |
Msa0393560 | AT5G03640.1 | 64.368 | 87 | 18 | 2 | 325 | 398 | 645 | 731 | 9.05e-27 | 113 |
Msa0393560 | AT1G16440.1 | 65.823 | 79 | 19 | 2 | 325 | 396 | 219 | 296 | 7.16e-26 | 109 |
Msa0393560 | AT3G12690.1 | 56.436 | 101 | 31 | 2 | 325 | 413 | 289 | 388 | 5.39e-25 | 107 |
Msa0393560 | AT3G12690.3 | 56.436 | 101 | 31 | 2 | 325 | 413 | 289 | 388 | 5.39e-25 | 107 |
Msa0393560 | AT3G12690.2 | 56.436 | 101 | 31 | 2 | 325 | 413 | 289 | 388 | 5.39e-25 | 107 |
Msa0393560 | AT2G44830.2 | 50.000 | 118 | 37 | 3 | 325 | 420 | 467 | 584 | 3.27e-24 | 105 |
Msa0393560 | AT2G44830.3 | 50.000 | 118 | 37 | 3 | 325 | 420 | 467 | 584 | 3.27e-24 | 105 |
Msa0393560 | AT2G44830.1 | 50.000 | 118 | 37 | 3 | 325 | 420 | 467 | 584 | 3.27e-24 | 105 |
Msa0393560 | AT4G26610.1 | 48.276 | 116 | 40 | 3 | 325 | 420 | 227 | 342 | 1.07e-23 | 103 |
Msa0393560 | AT5G40030.1 | 52.336 | 107 | 29 | 3 | 325 | 411 | 218 | 322 | 7.65e-23 | 100 |
Msa0393560 | AT5G55910.2 | 67.241 | 58 | 19 | 0 | 325 | 382 | 213 | 270 | 1.30e-21 | 97.4 |
Msa0393560 | AT5G55910.1 | 67.241 | 58 | 19 | 0 | 325 | 382 | 213 | 270 | 1.30e-21 | 97.4 |
Msa0393560 | AT2G26700.1 | 54.430 | 79 | 29 | 1 | 325 | 396 | 193 | 271 | 1.83e-21 | 97.1 |
Msa0393560 | AT2G34650.1 | 62.667 | 75 | 19 | 2 | 316 | 382 | 167 | 240 | 2.51e-20 | 93.2 |
Msa0393560 | AT3G44610.1 | 76.596 | 47 | 11 | 0 | 325 | 371 | 183 | 229 | 3.88e-19 | 89.7 |
Msa0393560 | AT3G14370.1 | 64.912 | 57 | 20 | 0 | 321 | 377 | 188 | 244 | 3.29e-18 | 87.0 |
Msa0393560 | AT5G58140.3 | 55.932 | 59 | 26 | 0 | 325 | 383 | 681 | 739 | 1.26e-17 | 85.9 |
Msa0393560 | AT5G58140.6 | 55.932 | 59 | 26 | 0 | 325 | 383 | 681 | 739 | 1.65e-17 | 85.5 |
Msa0393560 | AT5G58140.7 | 55.932 | 59 | 26 | 0 | 325 | 383 | 681 | 739 | 1.65e-17 | 85.5 |
Msa0393560 | AT5G58140.5 | 55.932 | 59 | 26 | 0 | 325 | 383 | 681 | 739 | 1.65e-17 | 85.5 |
Msa0393560 | AT5G58140.2 | 55.932 | 59 | 26 | 0 | 325 | 383 | 681 | 739 | 1.65e-17 | 85.5 |
Msa0393560 | AT5G58140.1 | 55.932 | 59 | 26 | 0 | 325 | 383 | 681 | 739 | 1.65e-17 | 85.5 |
Msa0393560 | AT1G53700.1 | 71.154 | 52 | 15 | 0 | 322 | 373 | 195 | 246 | 2.26e-17 | 84.3 |
Msa0393560 | AT1G51170.1 | 53.030 | 66 | 25 | 2 | 325 | 386 | 132 | 195 | 1.60e-14 | 75.5 |
Msa0393560 | AT3G25250.1 | 63.636 | 44 | 16 | 0 | 325 | 368 | 128 | 171 | 4.66e-14 | 73.9 |
Msa0393560 | AT4G13000.1 | 63.636 | 44 | 16 | 0 | 325 | 368 | 125 | 168 | 5.68e-14 | 73.6 |
Msa0393560 | AT3G20830.1 | 65.909 | 44 | 15 | 0 | 325 | 368 | 131 | 174 | 1.81e-13 | 72.0 |
Msa0393560 | AT3G45780.2 | 45.455 | 77 | 41 | 1 | 325 | 400 | 767 | 843 | 3.27e-13 | 72.4 |
Msa0393560 | AT3G45780.1 | 45.455 | 77 | 41 | 1 | 325 | 400 | 767 | 843 | 3.27e-13 | 72.4 |
Msa0393560 | AT5G62310.1 | 54.000 | 50 | 23 | 0 | 325 | 374 | 856 | 905 | 7.60e-13 | 71.2 |
Msa0393560 | AT3G17850.1 | 61.224 | 49 | 19 | 0 | 326 | 374 | 985 | 1033 | 8.98e-13 | 70.9 |
Msa0393560 | AT1G48490.4 | 59.184 | 49 | 20 | 0 | 326 | 374 | 932 | 980 | 1.74e-12 | 70.1 |
Msa0393560 | AT1G48490.3 | 59.184 | 49 | 20 | 0 | 326 | 374 | 931 | 979 | 1.93e-12 | 70.1 |
Msa0393560 | AT1G48490.2 | 59.184 | 49 | 20 | 0 | 326 | 374 | 931 | 979 | 1.93e-12 | 70.1 |
Msa0393560 | AT1G48490.1 | 59.184 | 49 | 20 | 0 | 326 | 374 | 931 | 979 | 1.93e-12 | 70.1 |
Msa0393560 | AT1G45160.2 | 47.619 | 63 | 33 | 0 | 312 | 374 | 759 | 821 | 1.75e-11 | 67.0 |
Msa0393560 | AT1G45160.1 | 47.619 | 63 | 33 | 0 | 312 | 374 | 759 | 821 | 1.98e-11 | 66.6 |
Find 88 sgRNAs with CRISPR-Local
Find 678 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACTTTGGACCAACTCTTTC+AGG | 0.136340 | 3_2:+7656583 | Msa0393560:CDS |
CATGAACTTCCTTAAGAAAA+AGG | 0.286513 | 3_2:+7665929 | Msa0393560:CDS |
GGCAAAATCTCGAAAGATTA+AGG | 0.300437 | 3_2:+7666963 | Msa0393560:CDS |
CGCAGCAGAGTTCTCTTAAA+AGG | 0.314702 | 3_2:+7665344 | Msa0393560:CDS |
GTTCCTACAAATCAGGAAAA+AGG | 0.319893 | 3_2:+7665239 | Msa0393560:intron |
AAGTTCATGTTATTGAATAT+TGG | 0.333214 | 3_2:-7665915 | None:intergenic |
CTCCTATTCTATTGTCTCTC+GGG | 0.340960 | 3_2:+7666941 | Msa0393560:CDS |
TTCACTGATGCCTGTGCTAC+TGG | 0.362686 | 3_2:-7666253 | None:intergenic |
CAGTTCTTCAATGCCGGATA+AGG | 0.364720 | 3_2:+7665794 | Msa0393560:intron |
ACTCCTATTCTATTGTCTCT+CGG | 0.372646 | 3_2:+7666940 | Msa0393560:CDS |
CTTGAGTATTTGCACATGAT+TGG | 0.380206 | 3_2:+7666757 | Msa0393560:CDS |
AAACTAAAACCAGGTTTACT+TGG | 0.386269 | 3_2:-7666117 | None:intergenic |
CTCAAGGGCAAGAAGAAATT+CGG | 0.399820 | 3_2:-7666740 | None:intergenic |
AAAATCAAGATCAAAGGAAA+AGG | 0.405263 | 3_2:+7666185 | Msa0393560:CDS |
TGGATTGCGGCATCTGCATC+TGG | 0.405291 | 3_2:-7666904 | None:intergenic |
AACCTCAGCCTTTGTTGGGA+TGG | 0.411067 | 3_2:-7656542 | None:intergenic |
AGTGCCTGCTTCAAACTAAC+AGG | 0.422205 | 3_2:-7665415 | None:intergenic |
AGACATACTCCAACCGACTT+TGG | 0.430778 | 3_2:+7656568 | Msa0393560:CDS |
CATCTCTCAGGCATCAGAAA+TGG | 0.441355 | 3_2:+7665450 | Msa0393560:CDS |
GTGAGGGAGTTCACTAGGTT+AGG | 0.450674 | 3_2:-7656502 | None:intergenic |
TCGTCTCAGGCATCGAGAAT+TGG | 0.453787 | 3_2:+7665382 | Msa0393560:CDS |
GATCAAAGTTTGTTCGTCTC+AGG | 0.454618 | 3_2:+7665369 | Msa0393560:CDS |
CTCAAGCCGTAGTACACGTT+TGG | 0.463268 | 3_2:+7665887 | Msa0393560:CDS |
TAGGAGTAAAGCAGGAAACT+TGG | 0.464494 | 3_2:-7666924 | None:intergenic |
CAATAGAATAGGAGTAAAGC+AGG | 0.470623 | 3_2:-7666932 | None:intergenic |
AGTAGTTTCAACAAGGAGAA+TGG | 0.472113 | 3_2:+7665990 | Msa0393560:CDS |
CCTAGTTCTAGCAATGATAG+TGG | 0.472374 | 3_2:+7665852 | Msa0393560:CDS |
TAGAGGATTGTGCATCTCTC+AGG | 0.474171 | 3_2:+7665438 | Msa0393560:CDS |
TATGTCCATCTTCGCGTACT+AGG | 0.475120 | 3_2:-7666813 | None:intergenic |
TTGTTTCAGTTCTTCAATGC+CGG | 0.475837 | 3_2:+7665788 | Msa0393560:intron |
ATAGTTGTCGCCGGCCGCAT+TGG | 0.476102 | 3_2:-7656409 | None:intergenic |
AGTTTGAAGCAGGCACTTAG+AGG | 0.481860 | 3_2:+7665421 | Msa0393560:CDS |
GAAGATGATTTGACTAACAT+TGG | 0.486591 | 3_2:-7666880 | None:intergenic |
TTTAGCTCTGGCTTTCTCTA+GGG | 0.488633 | 3_2:-7656455 | None:intergenic |
CTCGAAAGTGTAGATATCTC+TGG | 0.491395 | 3_2:-7665565 | None:intergenic |
GAAGCCTGTTAGTTTGAAGC+AGG | 0.492787 | 3_2:+7665411 | Msa0393560:CDS |
AATATCCTAGTACGCGAAGA+TGG | 0.496440 | 3_2:+7666808 | Msa0393560:CDS |
GCCCCGAGAGACAATAGAAT+AGG | 0.508430 | 3_2:-7666943 | None:intergenic |
GTGTAGATATCTCTGGCACT+AGG | 0.508864 | 3_2:-7665558 | None:intergenic |
ACGATCAATATCATCCTCAA+TGG | 0.511736 | 3_2:-7665266 | None:intergenic |
CAGAGATATCTACACTTTCG+AGG | 0.513537 | 3_2:+7665566 | Msa0393560:CDS |
CTTCAATGCCGGATAAGGAC+CGG | 0.517529 | 3_2:+7665799 | Msa0393560:CDS |
AATTTGTGAGGGAGTTCACT+AGG | 0.527620 | 3_2:-7656507 | None:intergenic |
AAATCAAGATCAAAGGAAAA+GGG | 0.528192 | 3_2:+7666186 | Msa0393560:CDS |
AGTGAAGAGGGCAATCTTAG+TGG | 0.531593 | 3_2:+7666270 | Msa0393560:CDS |
TCTAGCAATGATAGTGGAGT+AGG | 0.534883 | 3_2:+7665858 | Msa0393560:CDS |
TGAGACGAACAAACTTTGAT+CGG | 0.537838 | 3_2:-7665367 | None:intergenic |
CCACTATCATTGCTAGAACT+AGG | 0.538741 | 3_2:-7665852 | None:intergenic |
TCATTAAGAGTATCAGAGGT+TGG | 0.546438 | 3_2:+7665505 | Msa0393560:CDS |
AGCACAGGCATCAGTGAAGA+GGG | 0.549104 | 3_2:+7666258 | Msa0393560:CDS |
CTGATATTCAAACTAAAACC+AGG | 0.549340 | 3_2:-7666126 | None:intergenic |
GAGTATAGTACCAGTAGCAC+AGG | 0.550083 | 3_2:+7666243 | Msa0393560:CDS |
AAAAGCACTTCCAATGCGGC+CGG | 0.554228 | 3_2:+7656399 | None:intergenic |
CAATCATGTGCAAATACTCA+AGG | 0.555645 | 3_2:-7666756 | None:intergenic |
TGGCGGCGCGGTAAAGAAGT+TGG | 0.558355 | 3_2:+7665525 | Msa0393560:CDS |
AGTAGGGATCCAAGTAAACC+TGG | 0.561996 | 3_2:+7666108 | Msa0393560:intron |
CGAAAGATTAAGGCTGACAT+AGG | 0.564197 | 3_2:+7666973 | Msa0393560:CDS |
TTCAATGCCGGATAAGGACC+GGG | 0.572791 | 3_2:+7665800 | Msa0393560:CDS |
GGCCATCCCAACAAAGGCTG+AGG | 0.575558 | 3_2:+7656540 | Msa0393560:CDS |
TCCTATTCTATTGTCTCTCG+GGG | 0.575978 | 3_2:+7666942 | Msa0393560:CDS |
CTCTAGGGAACTACGTCCTG+TGG | 0.576099 | 3_2:-7656440 | None:intergenic |
AGAGTTGGTCCAAAGTCGGT+TGG | 0.577154 | 3_2:-7656577 | None:intergenic |
TAGCACAGGCATCAGTGAAG+AGG | 0.580292 | 3_2:+7666257 | Msa0393560:CDS |
TTAGGATTGAATAGATCTGT+AGG | 0.581694 | 3_2:-7656484 | None:intergenic |
TGTAGATATCTCTGGCACTA+GGG | 0.585695 | 3_2:-7665557 | None:intergenic |
ACAACTATTGTTGTAACCAC+AGG | 0.586674 | 3_2:+7656424 | Msa0393560:CDS |
CGCTACTAGTAGTTTCAACA+AGG | 0.593597 | 3_2:+7665983 | Msa0393560:CDS |
CAGCTCATTAAGAGTATCAG+AGG | 0.593779 | 3_2:+7665501 | Msa0393560:CDS |
TCAACTACAAGCTATGGAAG+TGG | 0.594868 | 3_2:-7667009 | None:intergenic |
CTTAGTGGTTCGAGTTGCAG+TGG | 0.596146 | 3_2:+7666285 | Msa0393560:CDS |
CTTCAACAACCTGAAAGAGT+TGG | 0.596972 | 3_2:-7656592 | None:intergenic |
GAGATTAAAAGTTCATCTAG+AGG | 0.597129 | 3_2:+7665304 | Msa0393560:CDS |
CCTTCACGATACAATTTGTG+AGG | 0.612348 | 3_2:-7656519 | None:intergenic |
CGTGAAGGCCATCCCAACAA+AGG | 0.621760 | 3_2:+7656534 | Msa0393560:CDS |
TGAAAGAGTTGGTCCAAAGT+CGG | 0.623277 | 3_2:-7656581 | None:intergenic |
TGTATATCGAGATCTAAAGC+CGG | 0.625042 | 3_2:+7666783 | Msa0393560:CDS |
CTTCACGATACAATTTGTGA+GGG | 0.629039 | 3_2:-7656518 | None:intergenic |
GTTACAACAATAGTTGTCGC+CGG | 0.633099 | 3_2:-7656418 | None:intergenic |
CCTCACAAATTGTATCGTGA+AGG | 0.633129 | 3_2:+7656519 | Msa0393560:CDS |
AATCATGTGCAAATACTCAA+GGG | 0.648407 | 3_2:-7666755 | None:intergenic |
TTAAGAGTATCAGAGGTTGG+CGG | 0.667397 | 3_2:+7665508 | Msa0393560:CDS |
AAAGCAGGAAACTTGGATTG+CGG | 0.672788 | 3_2:-7666917 | None:intergenic |
ACTACTAGTAGCGCAGCTTG+AGG | 0.673996 | 3_2:-7665973 | None:intergenic |
AGTATCAGAGGTTGGCGGCG+CGG | 0.677044 | 3_2:+7665513 | Msa0393560:CDS |
CTATCATTGCTAGAACTAGG+TGG | 0.677249 | 3_2:-7665849 | None:intergenic |
GCTGACATAGGTGCTCAAGT+CGG | 0.703445 | 3_2:+7666985 | Msa0393560:CDS |
GGATTGAATAGATCTGTAGG+CGG | 0.738440 | 3_2:-7656481 | None:intergenic |
CTAGAGGTCATAGTACATCG+CGG | 0.832410 | 3_2:+7665320 | Msa0393560:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTTAATTTTTTAATT+AGG | - | chr3_2:7662576-7662595 | None:intergenic | 0.0% |
!!! | TTTTTTAAAATAATATATTT+TGG | - | chr3_2:7666591-7666610 | None:intergenic | 0.0% |
!! | AAAAAAACTAATTCATTAAT+AGG | + | chr3_2:7657236-7657255 | Msa0393560:intron | 10.0% |
!!! | TGAAATTTTTCTTTTTAAAA+AGG | + | chr3_2:7658200-7658219 | Msa0393560:intron | 10.0% |
!!! | GAAATTTTTCTTTTTAAAAA+GGG | + | chr3_2:7658201-7658220 | Msa0393560:intron | 10.0% |
!! | AAATTAAAGAAAGAAAAAAA+TGG | + | chr3_2:7659595-7659614 | Msa0393560:intron | 10.0% |
!!! | ATGTATTTTAATTAAATTCA+GGG | - | chr3_2:7659664-7659683 | None:intergenic | 10.0% |
!! | TAAAATACATGAAATAAAAT+AGG | + | chr3_2:7659674-7659693 | Msa0393560:intron | 10.0% |
!!! | TGTAATTTTAAATTTTATCA+AGG | - | chr3_2:7661432-7661451 | Msa0393570:intron | 10.0% |
!!! | TTTAATTTTTTAATTAGGTT+AGG | - | chr3_2:7662571-7662590 | None:intergenic | 10.0% |
!!! | TAAATTACATTTTAATAAGT+TGG | + | chr3_2:7664572-7664591 | Msa0393560:intron | 10.0% |
!!! | TACTTTTCTTTTTTAATTAA+CGG | + | chr3_2:7664988-7665007 | Msa0393560:intron | 10.0% |
!!! | GAAATTATGAAGATTTTAAA+GGG | - | chr3_2:7656640-7656659 | None:intergenic | 15.0% |
!! | AATTCAAAATGTAATTCAAT+CGG | - | chr3_2:7656841-7656860 | None:intergenic | 15.0% |
!! | TAATAGCTATTTAGATATTA+AGG | - | chr3_2:7657288-7657307 | None:intergenic | 15.0% |
!!! | TCATTTATTCATTCTTTTTA+AGG | - | chr3_2:7657495-7657514 | None:intergenic | 15.0% |
!! | AATAAAAACAAACAAAAAAC+AGG | + | chr3_2:7657884-7657903 | Msa0393560:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | - | chr3_2:7658689-7658708 | None:intergenic | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | - | chr3_2:7658688-7658707 | None:intergenic | 15.0% |
!!! | AATTTTGCAATAATTTTTTG+CGG | - | chr3_2:7658432-7658451 | None:intergenic | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | - | chr3_2:7658467-7658486 | None:intergenic | 15.0% |
!! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr3_2:7658598-7658617 | Msa0393560:intron | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | + | chr3_2:7658688-7658707 | Msa0393560:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | + | chr3_2:7658689-7658708 | Msa0393560:intron | 15.0% |
!!! | AAATTGATGCATTTTTAAAA+GGG | - | chr3_2:7658763-7658782 | None:intergenic | 15.0% |
!!! | AAAATTGATGCATTTTTAAA+AGG | - | chr3_2:7658764-7658783 | None:intergenic | 15.0% |
!!! | TTATTACTGGTAATTTATTT+TGG | - | chr3_2:7658943-7658962 | None:intergenic | 15.0% |
!!! | AACATATTTGAAGTTTTTAA+TGG | - | chr3_2:7659023-7659042 | None:intergenic | 15.0% |
!!! | TTTTTTCTTTCTTTAATTTG+TGG | - | chr3_2:7659594-7659613 | None:intergenic | 15.0% |
!!! | TGTATTTTAATTAAATTCAG+GGG | - | chr3_2:7659663-7659682 | None:intergenic | 15.0% |
!!! | CATGTATTTTAATTAAATTC+AGG | - | chr3_2:7659665-7659684 | None:intergenic | 15.0% |
!!! | AAAAGTTTTTCAAAGATTAT+TGG | - | chr3_2:7659883-7659902 | None:intergenic | 15.0% |
!! | ACAATTTCTTCAATAATTTA+AGG | + | chr3_2:7660139-7660158 | Msa0393560:intron | 15.0% |
!! | ATTGTATTACTATTACATAT+TGG | + | chr3_2:7660978-7660997 | Msa0393560:intron | 15.0% |
!! | TTGTATTACTATTACATATT+GGG | + | chr3_2:7660979-7660998 | Msa0393560:intron | 15.0% |
!! | TCAGTTATTATTTGAAAATT+CGG | + | chr3_2:7662838-7662857 | Msa0393560:intron | 15.0% |
!! | AATAATTATGAATAAGTAAG+TGG | + | chr3_2:7664481-7664500 | Msa0393560:intron | 15.0% |
!! | ATAATTATGAATAAGTAAGT+GGG | + | chr3_2:7664482-7664501 | Msa0393560:intron | 15.0% |
!! | AAAGTTAATAAGAAATTCTA+AGG | + | chr3_2:7664920-7664939 | Msa0393560:intron | 15.0% |
!! | AAGTTAATAAGAAATTCTAA+GGG | + | chr3_2:7664921-7664940 | Msa0393560:intron | 15.0% |
!!! | GGAAATTATGAAGATTTTAA+AGG | - | chr3_2:7656641-7656660 | None:intergenic | 20.0% |
!! | ATTTCTTTGATGTACTAAAT+TGG | - | chr3_2:7657099-7657118 | None:intergenic | 20.0% |
!!! | ATGTTAATTTTATAGCTCAA+AGG | + | chr3_2:7657176-7657195 | Msa0393560:intron | 20.0% |
!!! | TGTTAATTTTATAGCTCAAA+GGG | + | chr3_2:7657177-7657196 | Msa0393560:intron | 20.0% |
!! | ATTGCAGAAAAACAAAATTA+GGG | - | chr3_2:7658304-7658323 | None:intergenic | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | - | chr3_2:7658337-7658356 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | - | chr3_2:7658338-7658357 | None:intergenic | 20.0% |
!!! | TTTTCCTAGTATAATTTGAT+TGG | - | chr3_2:7658864-7658883 | None:intergenic | 20.0% |
!! | TTAGAAATTACAATTGATGT+GGG | - | chr3_2:7658889-7658908 | None:intergenic | 20.0% |
!!! | ATTTTGGTAATTGATGTTAT+CGG | - | chr3_2:7658927-7658946 | None:intergenic | 20.0% |
!! | AAATGATTAGATGTTATTAC+TGG | - | chr3_2:7658956-7658975 | None:intergenic | 20.0% |
!!! | AGTTTTTAATGGAAGAATAT+TGG | - | chr3_2:7659012-7659031 | None:intergenic | 20.0% |
!! | TAATCTAGTAACAAACAATA+TGG | - | chr3_2:7659501-7659520 | None:intergenic | 20.0% |
!! | TAACAATGTTCCAAATTTAT+CGG | + | chr3_2:7659769-7659788 | Msa0393560:intron | 20.0% |
!!! | TAAAATAATCAGGTAGATTT+TGG | + | chr3_2:7660799-7660818 | Msa0393560:intron | 20.0% |
!! | GAGAGCAATTATTTATTAAA+AGG | + | chr3_2:7660950-7660969 | Msa0393560:intron | 20.0% |
!! | ATTTGAATAGATTAACCATT+TGG | + | chr3_2:7661546-7661565 | Msa0393560:intron | 20.0% |
!! | TTTGAATAGATTAACCATTT+GGG | + | chr3_2:7661547-7661566 | Msa0393560:intron | 20.0% |
!! | ATTATATTCCAAAACTCTTT+GGG | - | chr3_2:7661643-7661662 | Msa0393570:CDS | 20.0% |
!! | AATTATATTCCAAAACTCTT+TGG | - | chr3_2:7661644-7661663 | Msa0393570:CDS | 20.0% |
!!! | AAGCGTATTCAATAATATTT+TGG | + | chr3_2:7662134-7662153 | Msa0393560:intron | 20.0% |
!! | TGGAAAATTGTTAACATAAA+TGG | + | chr3_2:7662906-7662925 | Msa0393560:intron | 20.0% |
!!! | AGTTTCTTTTTATTGTAAAC+CGG | + | chr3_2:7663122-7663141 | Msa0393560:intron | 20.0% |
!!! | TTTTTGATTGAAAAAGGTTA+TGG | + | chr3_2:7663195-7663214 | Msa0393560:intron | 20.0% |
!!! | TTTTTTCCAAACCTAATTTA+TGG | - | chr3_2:7663233-7663252 | None:intergenic | 20.0% |
!!! | TAATTTGGAATTTTTCATGA+GGG | - | chr3_2:7663292-7663311 | None:intergenic | 20.0% |
!!! | TTAATTTGGAATTTTTCATG+AGG | - | chr3_2:7663293-7663312 | None:intergenic | 20.0% |
!! | GTCTTAATTCTATGTTAATT+TGG | - | chr3_2:7663307-7663326 | None:intergenic | 20.0% |
!!! | TTTTTCTTTCTTTTTTCAGT+TGG | - | chr3_2:7663329-7663348 | None:intergenic | 20.0% |
!! | CTAAATATGAGAACAAAAAT+CGG | + | chr3_2:7664395-7664414 | Msa0393560:intron | 20.0% |
!! | AGACAAAAATCAATTTATCA+TGG | + | chr3_2:7664727-7664746 | Msa0393560:intron | 20.0% |
!! | AGATTACAAAGAAAATTGTT+TGG | + | chr3_2:7664816-7664835 | Msa0393560:intron | 20.0% |
!! | AAGTTCATGTTATTGAATAT+TGG | - | chr3_2:7665918-7665937 | None:intergenic | 20.0% |
!! | TTAACTCAATTAATGTTAGT+AGG | + | chr3_2:7666091-7666110 | Msa0393560:intron | 20.0% |
!! | TAACTCAATTAATGTTAGTA+GGG | + | chr3_2:7666092-7666111 | Msa0393560:intron | 20.0% |
!! | TCCTTACAAATATTAACATA+GGG | + | chr3_2:7666473-7666492 | Msa0393560:intron | 20.0% |
!! | AAAATTGCAAAATGTTAATC+AGG | - | chr3_2:7666504-7666523 | None:intergenic | 20.0% |
!! | ATATGGGTAAATATCTAATA+TGG | - | chr3_2:7666618-7666637 | None:intergenic | 20.0% |
!! | TGGTAAAATACAACATATAT+GGG | - | chr3_2:7666634-7666653 | None:intergenic | 20.0% |
!! | ATGGTAAAATACAACATATA+TGG | - | chr3_2:7666635-7666654 | None:intergenic | 20.0% |
!!! | ATGTTGTATTTTACCATAAA+TGG | + | chr3_2:7666638-7666657 | Msa0393560:intron | 20.0% |
!!! | TATGAAGATTTTAAAGGGAA+AGG | - | chr3_2:7656635-7656654 | None:intergenic | 25.0% |
! | AACATGGGTAATATAACATT+AGG | + | chr3_2:7656727-7656746 | Msa0393560:intron | 25.0% |
! | TTATAAAACCGAGGAATTAA+GGG | + | chr3_2:7656973-7656992 | Msa0393560:intron | 25.0% |
! | CTATAAAATTAACATTGTCG+AGG | - | chr3_2:7657171-7657190 | None:intergenic | 25.0% |
! | GAATGAATAAATGATATCAC+AGG | + | chr3_2:7657501-7657520 | Msa0393560:intron | 25.0% |
!! | GCTTTTGTAAAAATAGGTTT+CGG | - | chr3_2:7657618-7657637 | None:intergenic | 25.0% |
!!! | CCTTTTGCTTTTGTAAAAAT+AGG | - | chr3_2:7657624-7657643 | None:intergenic | 25.0% |
!!! | CCTATTTTTACAAAAGCAAA+AGG | + | chr3_2:7657621-7657640 | Msa0393560:intron | 25.0% |
!! | TCAAGTGTTTCTTTGAATTT+TGG | - | chr3_2:7657913-7657932 | None:intergenic | 25.0% |
! | CATTGCAGAAAAACAAAATT+AGG | - | chr3_2:7658305-7658324 | None:intergenic | 25.0% |
!!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr3_2:7658626-7658645 | Msa0393560:intron | 25.0% |
!!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr3_2:7658627-7658646 | Msa0393560:intron | 25.0% |
! | GAAACCAATCAAATTATACT+AGG | + | chr3_2:7658857-7658876 | Msa0393560:intron | 25.0% |
! | GTTAGAAATTACAATTGATG+TGG | - | chr3_2:7658890-7658909 | None:intergenic | 25.0% |
!! | TTTTAATGGAAGAATATTGG+AGG | - | chr3_2:7659009-7659028 | None:intergenic | 25.0% |
! | TTATGAGAATATGATGACAT+TGG | - | chr3_2:7659108-7659127 | None:intergenic | 25.0% |
! | GAAAAAAATGAAGCAATTAC+AGG | - | chr3_2:7659147-7659166 | None:intergenic | 25.0% |
! | TAGCAAGTAGAAATAAGAAA+AGG | + | chr3_2:7659813-7659832 | Msa0393560:intron | 25.0% |
!!! | TTGAAACTAGTTCTATTCAA+AGG | - | chr3_2:7659964-7659983 | None:intergenic | 25.0% |
!! | TTCTTGATGATTTATTTGTC+TGG | - | chr3_2:7660098-7660117 | None:intergenic | 25.0% |
! | TTCTATCTATCGAAACAATA+AGG | + | chr3_2:7660290-7660309 | Msa0393560:intron | 25.0% |
! | TCTATCTATCGAAACAATAA+GGG | + | chr3_2:7660291-7660310 | Msa0393560:intron | 25.0% |
!! | CTACTTGTTAGACTTATTTA+TGG | - | chr3_2:7660440-7660459 | None:intergenic | 25.0% |
! | TATTGCAGACTATTATAACA+AGG | - | chr3_2:7660481-7660500 | None:intergenic | 25.0% |
! | TTATCGATGAATTATTTGTC+TGG | - | chr3_2:7660693-7660712 | Msa0393570:intron | 25.0% |
! | ACAACATCTCCAATAATATA+AGG | + | chr3_2:7660741-7660760 | Msa0393560:intron | 25.0% |
! | AGATCTAGACCTTATATTAT+TGG | - | chr3_2:7660753-7660772 | Msa0393570:intron | 25.0% |
! | TAGCTTGATTGAATTAACTT+AGG | - | chr3_2:7661098-7661117 | Msa0393570:intron | 25.0% |
! | TTATTAAAGGTAGATTGTCT+TGG | - | chr3_2:7661212-7661231 | Msa0393570:intron | 25.0% |
!! | AAGCAATAAGTCCAAAATTT+TGG | + | chr3_2:7661277-7661296 | Msa0393560:intron | 25.0% |
!!! | AATAAGTCCAAAATTTTGGT+AGG | + | chr3_2:7661281-7661300 | Msa0393560:intron | 25.0% |
! | TATAAAATGCAGCATTAATG+TGG | + | chr3_2:7661453-7661472 | Msa0393560:intron | 25.0% |
! | TTTACACTATTACATGTGTT+TGG | - | chr3_2:7661579-7661598 | Msa0393570:CDS | 25.0% |
! | ATGTTTGATAGAAGAGAAAA+CGG | + | chr3_2:7661610-7661629 | Msa0393560:intron | 25.0% |
! | TAGAGTTAAATTGACAAGTT+TGG | + | chr3_2:7661784-7661803 | Msa0393560:intron | 25.0% |
! | AGTATTCAACATGTTAAATG+TGG | + | chr3_2:7661865-7661884 | Msa0393560:intron | 25.0% |
! | AACATGTTAAATGTGGAAAA+GGG | + | chr3_2:7661872-7661891 | Msa0393560:intron | 25.0% |
! | GAAGATTAATATGAGTGTAA+TGG | + | chr3_2:7662083-7662102 | Msa0393560:intron | 25.0% |
! | TATAGAAAGAAAGAAGATGA+TGG | + | chr3_2:7662602-7662621 | Msa0393560:intron | 25.0% |
! | ATAGAAAGAAAGAAGATGAT+GGG | + | chr3_2:7662603-7662622 | Msa0393560:intron | 25.0% |
!!! | TTTTTTCCCAATACTAGTTT+AGG | - | chr3_2:7663171-7663190 | None:intergenic | 25.0% |
!!! | AACTGGTTTTTGATTGAAAA+AGG | + | chr3_2:7663189-7663208 | Msa0393560:intron | 25.0% |
! | TTTGAACCAAACCATAAATT+AGG | + | chr3_2:7663219-7663238 | Msa0393560:intron | 25.0% |
! | AAATTAGGTTTGGAAAAAAC+TGG | + | chr3_2:7663234-7663253 | Msa0393560:intron | 25.0% |
! | TATCTTACATAGACATGTTA+CGG | - | chr3_2:7663364-7663383 | None:intergenic | 25.0% |
!! | GTTTTCATTATTATTGCAGA+TGG | - | chr3_2:7663398-7663417 | None:intergenic | 25.0% |
! | AGATACTTGAATAATTCATC+AGG | + | chr3_2:7663462-7663481 | Msa0393560:intron | 25.0% |
! | AAAGAAACATAAACCTGTTA+TGG | - | chr3_2:7663577-7663596 | None:intergenic | 25.0% |
! | TTGGATAACAAAGTAAGAAA+TGG | - | chr3_2:7663948-7663967 | None:intergenic | 25.0% |
! | AGAAGTAAAGTGAATAGAAA+AGG | - | chr3_2:7664229-7664248 | None:intergenic | 25.0% |
! | CTTATTAATTGCCATCAAAT+TGG | + | chr3_2:7664261-7664280 | Msa0393560:intron | 25.0% |
! | TGAAATTGGAATATGGATTT+GGG | - | chr3_2:7664365-7664384 | None:intergenic | 25.0% |
! | TTGAAATTGGAATATGGATT+TGG | - | chr3_2:7664366-7664385 | None:intergenic | 25.0% |
! | TTGTTCTCATATTTAGCTAA+AGG | - | chr3_2:7664391-7664410 | None:intergenic | 25.0% |
! | TCATGGTTTATTTCATAATC+CGG | + | chr3_2:7664744-7664763 | Msa0393560:intron | 25.0% |
! | TAGTGAAAAATTTCTTGTGA+GGG | - | chr3_2:7664786-7664805 | None:intergenic | 25.0% |
! | ATAGTGAAAAATTTCTTGTG+AGG | - | chr3_2:7664787-7664806 | None:intergenic | 25.0% |
! | TTGAACACTTGAAAAACAAT+AGG | + | chr3_2:7664840-7664859 | Msa0393560:intron | 25.0% |
!! | CTTTCTTTACCTTTTTCTTA+AGG | - | chr3_2:7665941-7665960 | None:intergenic | 25.0% |
! | AAAATCAAGATCAAAGGAAA+AGG | + | chr3_2:7666185-7666204 | Msa0393560:CDS | 25.0% |
! | AAATCAAGATCAAAGGAAAA+GGG | + | chr3_2:7666186-7666205 | Msa0393560:CDS | 25.0% |
! | GTAATGTTCTGTAAGATAAA+CGG | - | chr3_2:7666436-7666455 | None:intergenic | 25.0% |
! | GTCCTTACAAATATTAACAT+AGG | + | chr3_2:7666472-7666491 | Msa0393560:intron | 25.0% |
! | TCCCTATGTTAATATTTGTA+AGG | - | chr3_2:7666477-7666496 | None:intergenic | 25.0% |
!!! | TGCAATTTTAGAGATCATTT+TGG | + | chr3_2:7666515-7666534 | Msa0393560:intron | 25.0% |
!!! | ATTTTGGAGTATTGATAATG+TGG | + | chr3_2:7666531-7666550 | Msa0393560:intron | 25.0% |
!! | AATTGTAGTTTGTATCAACT+TGG | - | chr3_2:7666561-7666580 | None:intergenic | 25.0% |
! | TGATACAAACTACAATTTCA+AGG | + | chr3_2:7666564-7666583 | Msa0393560:intron | 25.0% |
!!! | TTATATTAGTTTGTCATCCA+GGG | - | chr3_2:7666667-7666686 | None:intergenic | 25.0% |
TTAGGATTGAATAGATCTGT+AGG | - | chr3_2:7656487-7656506 | None:intergenic | 30.0% | |
!! | TTTTAAAGGGAAAGGTTCAT+TGG | - | chr3_2:7656627-7656646 | None:intergenic | 30.0% |
GTAATATAACATTAGGAGCA+TGG | + | chr3_2:7656734-7656753 | Msa0393560:intron | 30.0% | |
! | TCTGTTTGGTTTAATTGTGA+TGG | + | chr3_2:7656795-7656814 | Msa0393560:intron | 30.0% |
! | CTGTTTGGTTTAATTGTGAT+GGG | + | chr3_2:7656796-7656815 | Msa0393560:intron | 30.0% |
TGATGGGAGTTATAAATATG+AGG | + | chr3_2:7656812-7656831 | Msa0393560:intron | 30.0% | |
TCAAAATGTAATTCAATCGG+AGG | - | chr3_2:7656838-7656857 | None:intergenic | 30.0% | |
GAATTCAATTGAGAGAGATA+AGG | + | chr3_2:7656856-7656875 | Msa0393560:intron | 30.0% | |
TACAAATCTGAAGAGTAGTT+TGG | - | chr3_2:7656896-7656915 | None:intergenic | 30.0% | |
GTTATAAAACCGAGGAATTA+AGG | + | chr3_2:7656972-7656991 | Msa0393560:intron | 30.0% | |
! | GCTATAAAATGTTGTTTGCA+TGG | + | chr3_2:7657031-7657050 | Msa0393560:intron | 30.0% |
ACAGACTCTTTGAATTTAAG+AGG | + | chr3_2:7657069-7657088 | Msa0393560:intron | 30.0% | |
!! | TTTGTGTTTGTGTGTTTTGA+TGG | - | chr3_2:7657361-7657380 | None:intergenic | 30.0% |
AATCTTACAAGAGAAGTGAA+TGG | - | chr3_2:7657823-7657842 | None:intergenic | 30.0% | |
! | AATTACAAACAGTCGATTCA+AGG | + | chr3_2:7658021-7658040 | Msa0393560:intron | 30.0% |
CAAGATTAGAACACTATGAA+AGG | - | chr3_2:7658564-7658583 | None:intergenic | 30.0% | |
!! | TTACAAGGTCGCTATTTTAT+AGG | + | chr3_2:7658719-7658738 | Msa0393560:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | + | chr3_2:7658720-7658739 | Msa0393560:intron | 30.0% |
!!! | CATTTTTTAGAGTGATGCAA+TGG | - | chr3_2:7658798-7658817 | None:intergenic | 30.0% |
ATTTCCATCATAGTCAGAAT+TGG | + | chr3_2:7658972-7658991 | Msa0393560:intron | 30.0% | |
! | GTTTAAGTTATGAGTTTGTG+GGG | - | chr3_2:7659360-7659379 | None:intergenic | 30.0% |
! | CGTTTAAGTTATGAGTTTGT+GGG | - | chr3_2:7659361-7659380 | None:intergenic | 30.0% |
! | TCGTTTAAGTTATGAGTTTG+TGG | - | chr3_2:7659362-7659381 | None:intergenic | 30.0% |
CTTAATTCCAACAAATAGAG+TGG | + | chr3_2:7659419-7659438 | Msa0393560:intron | 30.0% | |
GTAAAAGAACATCATCAGTA+TGG | - | chr3_2:7659479-7659498 | None:intergenic | 30.0% | |
!! | TCTTTAATTTGTGGAGAGTA+TGG | - | chr3_2:7659585-7659604 | None:intergenic | 30.0% |
ATAATGTGAATGTGTTGGAA+AGG | - | chr3_2:7660031-7660050 | None:intergenic | 30.0% | |
TTCCAACACATTCACATTAT+TGG | + | chr3_2:7660031-7660050 | Msa0393560:intron | 30.0% | |
!! | GCTTCTTATTTCCTTTTTAG+TGG | - | chr3_2:7660172-7660191 | None:intergenic | 30.0% |
CTATCTATCGAAACAATAAG+GGG | + | chr3_2:7660292-7660311 | Msa0393560:intron | 30.0% | |
AAGGGGAACAGAAATAAAAT+AGG | + | chr3_2:7660309-7660328 | Msa0393560:intron | 30.0% | |
!! | TGATTTATCTTGACTTGTGT+TGG | - | chr3_2:7660919-7660938 | Msa0393570:intron | 30.0% |
CGAGAAGTGAAACTTATTAA+AGG | - | chr3_2:7661225-7661244 | Msa0393570:intron | 30.0% | |
AAAACAAAGGAATGAAGTGT+TGG | + | chr3_2:7661674-7661693 | Msa0393560:intron | 30.0% | |
!! | CATATGTATCGTTGTTTCTA+TGG | - | chr3_2:7661764-7661783 | Msa0393570:CDS | 30.0% |
CAACATGTTAAATGTGGAAA+AGG | + | chr3_2:7661871-7661890 | Msa0393560:intron | 30.0% | |
ACATGTTAAATGTGGAAAAG+GGG | + | chr3_2:7661873-7661892 | Msa0393560:intron | 30.0% | |
! | TGGAAATATTTGATGATCAC+CGG | + | chr3_2:7661991-7662010 | Msa0393560:intron | 30.0% |
!! | TGTAATGGATATGAAAGTGT+TGG | + | chr3_2:7662098-7662117 | Msa0393560:intron | 30.0% |
ATAGGAACTGTTCAAAACTT+TGG | + | chr3_2:7662236-7662255 | Msa0393560:intron | 30.0% | |
! | CTTGCATTTTATCCAAAAGA+TGG | - | chr3_2:7662321-7662340 | Msa0393570:CDS | 30.0% |
GTTGTAAGTATGTTGTGATT+TGG | - | chr3_2:7662768-7662787 | None:intergenic | 30.0% | |
!!! | AATTTTTGAAGCAGCAATTG+TGG | + | chr3_2:7662886-7662905 | Msa0393560:intron | 30.0% |
!!! | AATCGATTTTGAAATTGCAC+AGG | + | chr3_2:7662938-7662957 | Msa0393560:intron | 30.0% |
!!! | ATCGATTTTGAAATTGCACA+GGG | + | chr3_2:7662939-7662958 | Msa0393560:intron | 30.0% |
AAGGACATGTATTACTATGA+AGG | + | chr3_2:7662966-7662985 | Msa0393560:intron | 30.0% | |
TGTATTACTATGAAGGTTGT+TGG | + | chr3_2:7662973-7662992 | Msa0393560:intron | 30.0% | |
! | AACTAGTATTGGGAAAAAAC+TGG | + | chr3_2:7663172-7663191 | Msa0393560:intron | 30.0% |
ACCAAACCATAAATTAGGTT+TGG | + | chr3_2:7663224-7663243 | Msa0393560:intron | 30.0% | |
TCCAAACCTAATTTATGGTT+TGG | - | chr3_2:7663228-7663247 | None:intergenic | 30.0% | |
TTGAATAATTCATCAGGCAA+AGG | + | chr3_2:7663468-7663487 | Msa0393560:intron | 30.0% | |
! | TCATCACATATACAGCTTTT+AGG | + | chr3_2:7663507-7663526 | Msa0393560:intron | 30.0% |
! | CATCACATATACAGCTTTTA+GGG | + | chr3_2:7663508-7663527 | Msa0393560:intron | 30.0% |
ACAGGTTTATGTTTCTTTCT+TGG | + | chr3_2:7663579-7663598 | Msa0393560:intron | 30.0% | |
CTGTTATCACAATACAATAC+AGG | - | chr3_2:7663756-7663775 | None:intergenic | 30.0% | |
TAGTTCTTTCATGAAACACT+AGG | - | chr3_2:7663803-7663822 | None:intergenic | 30.0% | |
TTCATGAAAGAACTAAAACC+TGG | + | chr3_2:7663808-7663827 | Msa0393560:intron | 30.0% | |
TCATGAAAGAACTAAAACCT+GGG | + | chr3_2:7663809-7663828 | Msa0393560:intron | 30.0% | |
AACAAAGTAAGAAATGGCTT+AGG | - | chr3_2:7663942-7663961 | None:intergenic | 30.0% | |
AAGGAGTTGAAATTGGAATA+TGG | - | chr3_2:7664372-7664391 | None:intergenic | 30.0% | |
TTAGCTAAAGGAGTTGAAAT+TGG | - | chr3_2:7664379-7664398 | None:intergenic | 30.0% | |
CATCAAAATCTCAGTTTCTA+TGG | - | chr3_2:7664607-7664626 | None:intergenic | 30.0% | |
! | CATAGAAACTGAGATTTTGA+TGG | + | chr3_2:7664605-7664624 | Msa0393560:intron | 30.0% |
CTATACGTATCAAACACTTA+GGG | - | chr3_2:7665176-7665195 | None:intergenic | 30.0% | |
TCTATACGTATCAAACACTT+AGG | - | chr3_2:7665177-7665196 | None:intergenic | 30.0% | |
! | TGATATTGATCGTCTTTTCA+AGG | + | chr3_2:7665276-7665295 | Msa0393560:CDS | 30.0% |
GAGATTAAAAGTTCATCTAG+AGG | + | chr3_2:7665304-7665323 | Msa0393560:CDS | 30.0% | |
!!! | CACAATGAAATTTTTTCTCC+CGG | - | chr3_2:7665821-7665840 | None:intergenic | 30.0% |
CATGAACTTCCTTAAGAAAA+AGG | + | chr3_2:7665929-7665948 | Msa0393560:CDS | 30.0% | |
AAACTAAAACCAGGTTTACT+TGG | - | chr3_2:7666120-7666139 | None:intergenic | 30.0% | |
CTGATATTCAAACTAAAACC+AGG | - | chr3_2:7666129-7666148 | None:intergenic | 30.0% | |
TGACGAAAAATCAAGATCAA+AGG | + | chr3_2:7666179-7666198 | Msa0393560:CDS | 30.0% | |
CATGTCAAAACACTAAAGAT+AGG | + | chr3_2:7666320-7666339 | Msa0393560:intron | 30.0% | |
AGCATGGTAACTTAAATTTG+AGG | + | chr3_2:7666367-7666386 | Msa0393560:intron | 30.0% | |
! | ACTTAAATTTGAGGCACTTT+AGG | + | chr3_2:7666376-7666395 | Msa0393560:intron | 30.0% |
AAGGACTAATGACATTAAGT+TGG | - | chr3_2:7666458-7666477 | None:intergenic | 30.0% | |
!! | CTTATATTAGTTTGTCATCC+AGG | - | chr3_2:7666668-7666687 | None:intergenic | 30.0% |
AATCATGTGCAAATACTCAA+GGG | - | chr3_2:7666758-7666777 | None:intergenic | 30.0% | |
GAAGATGATTTGACTAACAT+TGG | - | chr3_2:7666883-7666902 | None:intergenic | 30.0% | |
ACAACTATTGTTGTAACCAC+AGG | + | chr3_2:7656424-7656443 | Msa0393560:CDS | 35.0% | |
CTTCACGATACAATTTGTGA+GGG | - | chr3_2:7656521-7656540 | None:intergenic | 35.0% | |
! | TTTTAACCTCAGCCTTTGTT+GGG | - | chr3_2:7656549-7656568 | None:intergenic | 35.0% |
!!! | TGCCATTTTTAATCCTAGCA+GGG | - | chr3_2:7656666-7656685 | None:intergenic | 35.0% |
!!! | TTGCCATTTTTAATCCTAGC+AGG | - | chr3_2:7656667-7656686 | None:intergenic | 35.0% |
! | TGTGTTCATTTTGTCATCCA+TGG | + | chr3_2:7656759-7656778 | Msa0393560:intron | 35.0% |
GTAGAAGCAAACAATCTGTT+TGG | + | chr3_2:7656781-7656800 | Msa0393560:intron | 35.0% | |
AAACCAACGTTATAAAACCG+AGG | + | chr3_2:7656964-7656983 | Msa0393560:intron | 35.0% | |
!! | ATTCCTCGGTTTTATAACGT+TGG | - | chr3_2:7656970-7656989 | None:intergenic | 35.0% |
TTCAAAGAGTCTGTAAGTCA+AGG | - | chr3_2:7657063-7657082 | None:intergenic | 35.0% | |
!!! | GTTTGTGTGTTTTGATGGAT+AGG | - | chr3_2:7657356-7657375 | None:intergenic | 35.0% |
! | ATGTTTTCTACCAACCTATG+TGG | + | chr3_2:7657431-7657450 | Msa0393560:intron | 35.0% |
! | TGTTTTCTACCAACCTATGT+GGG | + | chr3_2:7657432-7657451 | Msa0393560:intron | 35.0% |
AAAGATTCAACTTCCCACAT+AGG | - | chr3_2:7657448-7657467 | None:intergenic | 35.0% | |
! | AGGTTAGTTAGATAAGAGAC+TGG | + | chr3_2:7657521-7657540 | Msa0393560:intron | 35.0% |
! | GGTTAGTTAGATAAGAGACT+GGG | + | chr3_2:7657522-7657541 | Msa0393560:intron | 35.0% |
AATCTTAGTGTGGCAAAATG+TGG | - | chr3_2:7657581-7657600 | None:intergenic | 35.0% | |
GTTTCATGTGAATCTTAGTG+TGG | - | chr3_2:7657591-7657610 | None:intergenic | 35.0% | |
!! | TTAACAAGTGTCGAAGTTGA+AGG | + | chr3_2:7658124-7658143 | Msa0393560:intron | 35.0% |
!! | TAACAAGTGTCGAAGTTGAA+GGG | + | chr3_2:7658125-7658144 | Msa0393560:intron | 35.0% |
AAGTTGAAGGGTCAATTTCA+AGG | + | chr3_2:7658137-7658156 | Msa0393560:intron | 35.0% | |
AGTTGAAGGGTCAATTTCAA+GGG | + | chr3_2:7658138-7658157 | Msa0393560:intron | 35.0% | |
!! | GACAAGGTCGCTATTTTATA+GGG | - | chr3_2:7658244-7658263 | None:intergenic | 35.0% |
!! | TGACAAGGTCGCTATTTTAT+AGG | - | chr3_2:7658245-7658264 | None:intergenic | 35.0% |
AAGTAGGGACTAAACTTACA+AGG | + | chr3_2:7658704-7658723 | Msa0393560:intron | 35.0% | |
CAAACCAATTCTGACTATGA+TGG | - | chr3_2:7658979-7658998 | None:intergenic | 35.0% | |
GCAATTACAGGAAGTTAACA+AGG | - | chr3_2:7659135-7659154 | None:intergenic | 35.0% | |
AGCAACTTATGTTCAAGACT+AGG | - | chr3_2:7659171-7659190 | None:intergenic | 35.0% | |
ATTCACTATGTTGTAGTGAG+GGG | - | chr3_2:7659239-7659258 | None:intergenic | 35.0% | |
CATTCACTATGTTGTAGTGA+GGG | - | chr3_2:7659240-7659259 | None:intergenic | 35.0% | |
TACAACATAGTGAATGCATG+CGG | + | chr3_2:7659244-7659263 | Msa0393560:intron | 35.0% | |
TAGGAATCCACTCTATTTGT+TGG | - | chr3_2:7659429-7659448 | None:intergenic | 35.0% | |
GATCAGTATGTTACAACTAG+GGG | - | chr3_2:7659452-7659471 | None:intergenic | 35.0% | |
GGATCAGTATGTTACAACTA+GGG | - | chr3_2:7659453-7659472 | None:intergenic | 35.0% | |
! | TTGGAACATTGTTACTTGCT+AGG | - | chr3_2:7659763-7659782 | None:intergenic | 35.0% |
TTGCAGAAAAAACATGGTGA+AGG | - | chr3_2:7659910-7659929 | None:intergenic | 35.0% | |
!!! | TCACCATGTTTTTTCTGCAA+CGG | + | chr3_2:7659910-7659929 | Msa0393560:intron | 35.0% |
CACACTGTTAAGTTAATTCC+AGG | + | chr3_2:7659993-7660012 | Msa0393560:intron | 35.0% | |
GAAAGGTTAATACAAGTTCC+TGG | - | chr3_2:7660014-7660033 | None:intergenic | 35.0% | |
TGTGTGTTTGACAGAATGAT+AGG | - | chr3_2:7660222-7660241 | None:intergenic | 35.0% | |
TAAAACCATATCCCTCTAAG+TGG | + | chr3_2:7660389-7660408 | Msa0393560:intron | 35.0% | |
AAAACCATATCCCTCTAAGT+GGG | + | chr3_2:7660390-7660409 | Msa0393560:intron | 35.0% | |
! | ATTGGTGATTACAGGATGTT+GGG | - | chr3_2:7660528-7660547 | Msa0393570:intron | 35.0% |
CACACAGTTAAGTTAAGTTC+AGG | + | chr3_2:7660591-7660610 | Msa0393560:intron | 35.0% | |
TTATTGGAGATGTTGTCTGA+AGG | - | chr3_2:7660737-7660756 | Msa0393570:intron | 35.0% | |
ACCAAGCTGCTAAAATAATC+AGG | + | chr3_2:7660789-7660808 | Msa0393560:intron | 35.0% | |
!!! | ACCTGATTATTTTAGCAGCT+TGG | - | chr3_2:7660793-7660812 | Msa0393570:intron | 35.0% |
AACAAACACACACACATTCA+TGG | + | chr3_2:7661150-7661169 | Msa0393560:intron | 35.0% | |
ACATTCATGGAAAACAGAGA+AGG | + | chr3_2:7661163-7661182 | Msa0393560:intron | 35.0% | |
CATTCATGGAAAACAGAGAA+GGG | + | chr3_2:7661164-7661183 | Msa0393560:intron | 35.0% | |
! | ATGGGTACCTACCAAAATTT+TGG | - | chr3_2:7661291-7661310 | Msa0393570:CDS | 35.0% |
! | ACTTCAAGTTACAGAAGGAA+GGG | + | chr3_2:7661339-7661358 | Msa0393560:intron | 35.0% |
CTAATACTTCCTCATTGCTT+AGG | - | chr3_2:7661390-7661409 | Msa0393570:intron | 35.0% | |
!! | CTAAGCAATGAGGAAGTATT+AGG | + | chr3_2:7661388-7661407 | Msa0393560:intron | 35.0% |
CGTCACTTATTATGTTCTCA+CGG | - | chr3_2:7661492-7661511 | Msa0393570:CDS | 35.0% | |
CGTGAGAACATAATAAGTGA+CGG | + | chr3_2:7661490-7661509 | Msa0393560:intron | 35.0% | |
CTATTACATGTGTTTGGAGA+GGG | - | chr3_2:7661573-7661592 | Msa0393570:CDS | 35.0% | |
ACTATTACATGTGTTTGGAG+AGG | - | chr3_2:7661574-7661593 | Msa0393570:CDS | 35.0% | |
ATTAGCACCAGAGAAAACAA+AGG | + | chr3_2:7661661-7661680 | Msa0393560:intron | 35.0% | |
!!! | CTTCATTCCTTTGTTTTCTC+TGG | - | chr3_2:7661671-7661690 | Msa0393570:CDS | 35.0% |
! | GCGGATTTCAAAATCGATTT+CGG | - | chr3_2:7661716-7661735 | Msa0393570:CDS | 35.0% |
!!! | ATCGATTTTGAAATCCGCTT+TGG | + | chr3_2:7661718-7661737 | Msa0393560:intron | 35.0% |
ACCATCATCGTTACAACAAA+AGG | + | chr3_2:7661907-7661926 | Msa0393560:intron | 35.0% | |
!! | TCCTTTTGTTGTAACGATGA+TGG | - | chr3_2:7661911-7661930 | Msa0393570:CDS | 35.0% |
CATCGTTACAACAAAAGGAA+AGG | + | chr3_2:7661912-7661931 | Msa0393560:intron | 35.0% | |
AAAGACTGAGAATGAGAACA+TGG | + | chr3_2:7661971-7661990 | Msa0393560:intron | 35.0% | |
! | GGAAATATTTGATGATCACC+GGG | + | chr3_2:7661992-7662011 | Msa0393560:intron | 35.0% |
AGTGAGAGATGAAAAGAAAC+AGG | + | chr3_2:7662054-7662073 | Msa0393560:intron | 35.0% | |
AGAGATGAAAAGAAACAGGA+CGG | + | chr3_2:7662058-7662077 | Msa0393560:intron | 35.0% | |
CAAAGCAAGAGAATGGATAT+CGG | + | chr3_2:7662183-7662202 | Msa0393560:intron | 35.0% | |
GAAGAGACAACAACATAGAT+AGG | + | chr3_2:7662218-7662237 | Msa0393560:intron | 35.0% | |
GAACTGTTCAAAACTTTGGT+CGG | + | chr3_2:7662240-7662259 | Msa0393560:intron | 35.0% | |
ATCAACACTTAACGTAAGAG+TGG | + | chr3_2:7662273-7662292 | Msa0393560:intron | 35.0% | |
TCAACACTTAACGTAAGAGT+GGG | + | chr3_2:7662274-7662293 | Msa0393560:intron | 35.0% | |
! | TCAAAAAGGAGAGTATGTGA+TGG | + | chr3_2:7662362-7662381 | Msa0393560:intron | 35.0% |
TCATCTTTGTCAGACAACAA+TGG | - | chr3_2:7662473-7662492 | None:intergenic | 35.0% | |
GTCGTCGTTGATATTACTTT+CGG | - | chr3_2:7662714-7662733 | None:intergenic | 35.0% | |
! | TTGTGGATTTGGGATTATGA+AGG | - | chr3_2:7662805-7662824 | None:intergenic | 35.0% |
! | CTCTGCTAATTTGTGGATTT+GGG | - | chr3_2:7662815-7662834 | None:intergenic | 35.0% |
! | TCTCTGCTAATTTGTGGATT+TGG | - | chr3_2:7662816-7662835 | None:intergenic | 35.0% |
TGAAAATTCGGTCAGTTTCA+TGG | + | chr3_2:7662850-7662869 | Msa0393560:intron | 35.0% | |
!!! | TCGATTTTGAAATTGCACAG+GGG | + | chr3_2:7662940-7662959 | Msa0393560:intron | 35.0% |
AACCAGACCTAAACTAGTAT+TGG | + | chr3_2:7663161-7663180 | Msa0393560:intron | 35.0% | |
ACCAGACCTAAACTAGTATT+GGG | + | chr3_2:7663162-7663181 | Msa0393560:intron | 35.0% | |
ATAACACTTGAGTGACATTG+TGG | - | chr3_2:7663264-7663283 | None:intergenic | 35.0% | |
! | TGGAATTTTTCATGAGGGAT+GGG | - | chr3_2:7663287-7663306 | None:intergenic | 35.0% |
! | TTGGAATTTTTCATGAGGGA+TGG | - | chr3_2:7663288-7663307 | None:intergenic | 35.0% |
ATACGAATTATGCAGCATGT+AGG | + | chr3_2:7663433-7663452 | Msa0393560:intron | 35.0% | |
TACGAATTATGCAGCATGTA+GGG | + | chr3_2:7663434-7663453 | Msa0393560:intron | 35.0% | |
GCTGTATATGTGATGACTTA+GGG | - | chr3_2:7663503-7663522 | None:intergenic | 35.0% | |
AGCTGTATATGTGATGACTT+AGG | - | chr3_2:7663504-7663523 | None:intergenic | 35.0% | |
!! | AGACATTGTGCTTTGCTTTT+TGG | - | chr3_2:7663628-7663647 | None:intergenic | 35.0% |
!! | AATAGATTGCCACTTTGTCA+AGG | + | chr3_2:7663833-7663852 | Msa0393560:intron | 35.0% |
GAACTTTATCCTTGACAAAG+TGG | - | chr3_2:7663845-7663864 | None:intergenic | 35.0% | |
GTCAAGGATAAAGTTCAAGA+TGG | + | chr3_2:7663849-7663868 | Msa0393560:intron | 35.0% | |
GCTTATTCTACACTTGAAAC+TGG | - | chr3_2:7663891-7663910 | None:intergenic | 35.0% | |
! | CTTACTTTGTTATCCAAGCT+TGG | + | chr3_2:7663951-7663970 | Msa0393560:intron | 35.0% |
GAGGCTGTTACAAAATAAAG+AGG | + | chr3_2:7664007-7664026 | Msa0393560:intron | 35.0% | |
!! | TGGCATGTTGAAGTTTGTTA+GGG | - | chr3_2:7664071-7664090 | None:intergenic | 35.0% |
GTTGTGATGAGAAATTAGGA+GGG | - | chr3_2:7664289-7664308 | None:intergenic | 35.0% | |
AAGGGTTGTGATGAGAAATT+AGG | - | chr3_2:7664293-7664312 | None:intergenic | 35.0% | |
CACGATGAAAATGGAATCAA+GGG | - | chr3_2:7664311-7664330 | None:intergenic | 35.0% | |
TCACGATGAAAATGGAATCA+AGG | - | chr3_2:7664312-7664331 | None:intergenic | 35.0% | |
GAAGTGAATCACGATGAAAA+TGG | - | chr3_2:7664320-7664339 | None:intergenic | 35.0% | |
!!! | TGATGGATTCGCGATTTTAT+AGG | + | chr3_2:7664622-7664641 | Msa0393560:intron | 35.0% |
GAAAAATTTCTTGTGAGGGA+CGG | - | chr3_2:7664782-7664801 | None:intergenic | 35.0% | |
! | AGAAATTCTAAGGGTGTGTT+TGG | + | chr3_2:7664930-7664949 | Msa0393560:intron | 35.0% |
TTTGTAGGAACAACTACTCT+GGG | - | chr3_2:7665230-7665249 | None:intergenic | 35.0% | |
ATTTGTAGGAACAACTACTC+TGG | - | chr3_2:7665231-7665250 | None:intergenic | 35.0% | |
AGTAGTTGTTCCTACAAATC+AGG | + | chr3_2:7665232-7665251 | Msa0393560:intron | 35.0% | |
GTTCCTACAAATCAGGAAAA+AGG | + | chr3_2:7665239-7665258 | Msa0393560:intron | 35.0% | |
!! | GTACCTTTTTCCTGATTTGT+AGG | - | chr3_2:7665245-7665264 | None:intergenic | 35.0% |
ACGATCAATATCATCCTCAA+TGG | - | chr3_2:7665269-7665288 | None:intergenic | 35.0% | |
TGAGACGAACAAACTTTGAT+CGG | - | chr3_2:7665370-7665389 | None:intergenic | 35.0% | |
!! | TCATTAAGAGTATCAGAGGT+TGG | + | chr3_2:7665505-7665524 | Msa0393560:CDS | 35.0% |
TGCTAATCATTCTATTCCTG+TGG | + | chr3_2:7665622-7665641 | Msa0393560:intron | 35.0% | |
GCTTAAAAGAAATGACAGCT+AGG | + | chr3_2:7665657-7665676 | Msa0393560:intron | 35.0% | |
AAGAGGAACAATCTGAACTT+GGG | - | chr3_2:7665690-7665709 | None:intergenic | 35.0% | |
AAAGAGGAACAATCTGAACT+TGG | - | chr3_2:7665691-7665710 | None:intergenic | 35.0% | |
AAGCAAAATACTACGAACCT+AGG | + | chr3_2:7665731-7665750 | Msa0393560:intron | 35.0% | |
ACTGAAACAAGATTTACTCG+AGG | - | chr3_2:7665778-7665797 | None:intergenic | 35.0% | |
TTGTTTCAGTTCTTCAATGC+CGG | + | chr3_2:7665788-7665807 | Msa0393560:intron | 35.0% | |
AGTAGTTTCAACAAGGAGAA+TGG | + | chr3_2:7665990-7666009 | Msa0393560:CDS | 35.0% | |
ATGCTATGATTTGAACTGCA+TGG | - | chr3_2:7666066-7666085 | None:intergenic | 35.0% | |
!!! | CTTTAGTGTTTTGACATGTG+CGG | - | chr3_2:7666318-7666337 | None:intergenic | 35.0% |
!! | TTGGAGTATTGATAATGTGG+AGG | + | chr3_2:7666534-7666553 | Msa0393560:intron | 35.0% |
TTTACCATAAATGGTTTCCC+TGG | + | chr3_2:7666647-7666666 | Msa0393560:intron | 35.0% | |
AGTAATGTCATTGCATTTCC+AGG | + | chr3_2:7666707-7666726 | Msa0393560:intron | 35.0% | |
AAATTCGGCAACAAAAAACC+TGG | - | chr3_2:7666728-7666747 | None:intergenic | 35.0% | |
CAATCATGTGCAAATACTCA+AGG | - | chr3_2:7666759-7666778 | None:intergenic | 35.0% | |
CTTGAGTATTTGCACATGAT+TGG | + | chr3_2:7666757-7666776 | Msa0393560:CDS | 35.0% | |
! | TGTATATCGAGATCTAAAGC+CGG | + | chr3_2:7666783-7666802 | Msa0393560:CDS | 35.0% |
CAATAGAATAGGAGTAAAGC+AGG | - | chr3_2:7666935-7666954 | None:intergenic | 35.0% | |
ACTCCTATTCTATTGTCTCT+CGG | + | chr3_2:7666940-7666959 | Msa0393560:CDS | 35.0% | |
GGCAAAATCTCGAAAGATTA+AGG | + | chr3_2:7666963-7666982 | Msa0393560:CDS | 35.0% | |
GTTACAACAATAGTTGTCGC+CGG | - | chr3_2:7656421-7656440 | None:intergenic | 40.0% | |
!! | TTTAGCTCTGGCTTTCTCTA+GGG | - | chr3_2:7656458-7656477 | None:intergenic | 40.0% |
!!! | TTTTAGCTCTGGCTTTCTCT+AGG | - | chr3_2:7656459-7656478 | None:intergenic | 40.0% |
GGATTGAATAGATCTGTAGG+CGG | - | chr3_2:7656484-7656503 | None:intergenic | 40.0% | |
AATTTGTGAGGGAGTTCACT+AGG | - | chr3_2:7656510-7656529 | None:intergenic | 40.0% | |
CCTTCACGATACAATTTGTG+AGG | - | chr3_2:7656522-7656541 | None:intergenic | 40.0% | |
CCTCACAAATTGTATCGTGA+AGG | + | chr3_2:7656519-7656538 | Msa0393560:CDS | 40.0% | |
! | CTTTTAACCTCAGCCTTTGT+TGG | - | chr3_2:7656550-7656569 | None:intergenic | 40.0% |
! | TGAAAGAGTTGGTCCAAAGT+CGG | - | chr3_2:7656584-7656603 | None:intergenic | 40.0% |
CTTCAACAACCTGAAAGAGT+TGG | - | chr3_2:7656595-7656614 | None:intergenic | 40.0% | |
TAAAGGGAAAGGTTCATTGG+AGG | - | chr3_2:7656624-7656643 | None:intergenic | 40.0% | |
! | ATTTTTAATCCTAGCAGGGC+AGG | - | chr3_2:7656662-7656681 | None:intergenic | 40.0% |
TGCCCTGCTAGGATTAAAAA+TGG | + | chr3_2:7656661-7656680 | Msa0393560:intron | 40.0% | |
TGACCAATTGCTGAGAAACA+TGG | + | chr3_2:7656711-7656730 | Msa0393560:intron | 40.0% | |
GACCAATTGCTGAGAAACAT+GGG | + | chr3_2:7656712-7656731 | Msa0393560:intron | 40.0% | |
TACCCATGTTTCTCAGCAAT+TGG | - | chr3_2:7656717-7656736 | None:intergenic | 40.0% | |
CAGATTGTTTGCTTCTACCA+TGG | - | chr3_2:7656779-7656798 | None:intergenic | 40.0% | |
ATTGAGAGAGATAAGGTGCA+CGG | + | chr3_2:7656863-7656882 | Msa0393560:intron | 40.0% | |
ATTCAACTTCCCACATAGGT+TGG | - | chr3_2:7657444-7657463 | None:intergenic | 40.0% | |
TTGTCATAGCTCCATGTGAT+GGG | - | chr3_2:7657705-7657724 | None:intergenic | 40.0% | |
ATTGTCATAGCTCCATGTGA+TGG | - | chr3_2:7657706-7657725 | None:intergenic | 40.0% | |
GGATACAAAATAGTACGCTG+TGG | + | chr3_2:7657757-7657776 | Msa0393560:intron | 40.0% | |
!! | TGCCTTTTCTAGCCACTAAA+TGG | - | chr3_2:7657783-7657802 | None:intergenic | 40.0% |
CAAGTCACCATGGATACATT+TGG | - | chr3_2:7658069-7658088 | None:intergenic | 40.0% | |
TTGAATCTTGCAAGTCACCA+TGG | - | chr3_2:7658079-7658098 | None:intergenic | 40.0% | |
AAGTAGGGACTAAACTGACA+AGG | - | chr3_2:7658260-7658279 | None:intergenic | 40.0% | |
!! | AGTCAGAATTGGTTTGTCTC+TGG | + | chr3_2:7658983-7659002 | Msa0393560:intron | 40.0% |
! | CATTTCAGTTTTTACCCGAC+GGG | - | chr3_2:7659062-7659081 | None:intergenic | 40.0% |
! | GCATTTCAGTTTTTACCCGA+CGG | - | chr3_2:7659063-7659082 | None:intergenic | 40.0% |
GCATTCACTATGTTGTAGTG+AGG | - | chr3_2:7659241-7659260 | None:intergenic | 40.0% | |
CAGTCAAGTCATTCAGAGTT+TGG | - | chr3_2:7659396-7659415 | None:intergenic | 40.0% | |
AGTATGTTACAACTAGGGGT+AGG | - | chr3_2:7659448-7659467 | None:intergenic | 40.0% | |
GGGATCAGTATGTTACAACT+AGG | - | chr3_2:7659454-7659473 | None:intergenic | 40.0% | |
AGAACATCATCAGTATGGCA+GGG | - | chr3_2:7659474-7659493 | None:intergenic | 40.0% | |
AAGAACATCATCAGTATGGC+AGG | - | chr3_2:7659475-7659494 | None:intergenic | 40.0% | |
TATGACGCATCGAAACTATG+AGG | + | chr3_2:7659845-7659864 | Msa0393560:intron | 40.0% | |
GTTCCGTTGCAGAAAAAACA+TGG | - | chr3_2:7659916-7659935 | None:intergenic | 40.0% | |
TATTCAAAGGCCTACTGCAT+AGG | - | chr3_2:7659951-7659970 | None:intergenic | 40.0% | |
GGCCAATAATGTGAATGTGT+TGG | - | chr3_2:7660036-7660055 | None:intergenic | 40.0% | |
! | AGCTTGTTTGAGTTCATGCA+AGG | - | chr3_2:7660057-7660076 | None:intergenic | 40.0% |
AAGGACAGATGCCACTAAAA+AGG | + | chr3_2:7660158-7660177 | Msa0393560:intron | 40.0% | |
CATTCTGTCAAACACACAGA+CGG | + | chr3_2:7660224-7660243 | Msa0393560:intron | 40.0% | |
AAACCATATCCCTCTAAGTG+GGG | + | chr3_2:7660391-7660410 | Msa0393560:intron | 40.0% | |
GTGTCATAGATCCATGTAAC+AGG | - | chr3_2:7660418-7660437 | None:intergenic | 40.0% | |
! | CATTGGTGATTACAGGATGT+TGG | - | chr3_2:7660529-7660548 | Msa0393570:intron | 40.0% |
! | TCTTTGAAGACCTACTGCAT+TGG | - | chr3_2:7660546-7660565 | Msa0393570:intron | 40.0% |
TTAGCAGCTTGGTTTCTGTT+TGG | - | chr3_2:7660782-7660801 | Msa0393570:intron | 40.0% | |
CTTGTGTTGGAATGTCTCTT+GGG | - | chr3_2:7660906-7660925 | Msa0393570:intron | 40.0% | |
ACTTGTGTTGGAATGTCTCT+TGG | - | chr3_2:7660907-7660926 | Msa0393570:intron | 40.0% | |
CACACATACACACACAAGTT+AGG | + | chr3_2:7661059-7661078 | Msa0393560:intron | 40.0% | |
ATTGCTTCAAAACTCACCCT+CGG | - | chr3_2:7661264-7661283 | Msa0393570:CDS | 40.0% | |
!! | ATTTTGGTAGGTACCCATGA+AGG | + | chr3_2:7661293-7661312 | Msa0393560:intron | 40.0% |
! | CAAGGACTTCAAGTTACAGA+AGG | + | chr3_2:7661334-7661353 | Msa0393560:intron | 40.0% |
! | GACTTCAAGTTACAGAAGGA+AGG | + | chr3_2:7661338-7661357 | Msa0393560:intron | 40.0% |
! | TTTGAAATCCGCTTTGGTTG+TGG | + | chr3_2:7661724-7661743 | Msa0393560:intron | 40.0% |
GGTATCAATCTAATGCTTCC+CGG | - | chr3_2:7662013-7662032 | Msa0393570:CDS | 40.0% | |
TTAACGTCTCTCAGTCTTAC+TGG | - | chr3_2:7662034-7662053 | Msa0393570:CDS | 40.0% | |
CCAAAAGATGGATCAATCTC+TGG | - | chr3_2:7662309-7662328 | Msa0393570:CDS | 40.0% | |
! | CCAGAGATTGATCCATCTTT+TGG | + | chr3_2:7662306-7662325 | Msa0393560:intron | 40.0% |
TGCCTCTTTAGCGTTCAAAA+AGG | + | chr3_2:7662348-7662367 | Msa0393560:intron | 40.0% | |
! | CTCCTTTTTGAACGCTAAAG+AGG | - | chr3_2:7662353-7662372 | Msa0393570:CDS | 40.0% |
! | TATGTGATGGAGAAGACAGT+CGG | + | chr3_2:7662375-7662394 | Msa0393560:intron | 40.0% |
!! | CACTGATTCTGTCCTGAATT+TGG | + | chr3_2:7662404-7662423 | Msa0393560:intron | 40.0% |
TCTTTGTCAGACAACAATGG+TGG | - | chr3_2:7662470-7662489 | None:intergenic | 40.0% | |
!! | GAAAGAAAGAAGATGATGGG+AGG | + | chr3_2:7662606-7662625 | Msa0393560:intron | 40.0% |
TATCAACGACGACAAATGCA+CGG | + | chr3_2:7662721-7662740 | Msa0393560:intron | 40.0% | |
!! | TATGAAGGCAGTGTTGTTTG+TGG | - | chr3_2:7662790-7662809 | None:intergenic | 40.0% |
CTGAGTTCTCTGCTAATTTG+TGG | - | chr3_2:7662822-7662841 | None:intergenic | 40.0% | |
TACTATGAAGGTTGTTGGTG+TGG | + | chr3_2:7662978-7662997 | Msa0393560:intron | 40.0% | |
! | GAGTGAGTTGAATGAGTGTA+AGG | + | chr3_2:7663035-7663054 | Msa0393560:intron | 40.0% |
AAGGTTAAATCGCGATTGCA+AGG | + | chr3_2:7663054-7663073 | Msa0393560:intron | 40.0% | |
! | GTTCAGAATCGGTTCAAAAC+CGG | - | chr3_2:7663144-7663163 | None:intergenic | 40.0% |
! | GTTTAGGTCTGGTTCAGAAT+CGG | - | chr3_2:7663155-7663174 | None:intergenic | 40.0% |
! | TCCCAATACTAGTTTAGGTC+TGG | - | chr3_2:7663166-7663185 | None:intergenic | 40.0% |
GATACAAGGAGATCCATAAC+AGG | + | chr3_2:7663561-7663580 | Msa0393560:intron | 40.0% | |
TTGGCTCCTCTCTAATATCA+TGG | + | chr3_2:7663598-7663617 | Msa0393560:intron | 40.0% | |
AAAGTGGCAATCTATTTCCC+AGG | - | chr3_2:7663829-7663848 | None:intergenic | 40.0% | |
! | TTTGTTATCCAAGCTTGGCA+TGG | + | chr3_2:7663956-7663975 | Msa0393560:intron | 40.0% |
! | CTGGCATGTTGAAGTTTGTT+AGG | - | chr3_2:7664072-7664091 | None:intergenic | 40.0% |
TTAGGAGGGTTCCAATTTGA+TGG | - | chr3_2:7664275-7664294 | None:intergenic | 40.0% | |
GGTTGTGATGAGAAATTAGG+AGG | - | chr3_2:7664290-7664309 | None:intergenic | 40.0% | |
TCTGTCTTTCTCTCTAGTCA+CGG | - | chr3_2:7664710-7664729 | None:intergenic | 40.0% | |
! | TAAGGGTGTGTTTGGATTGA+GGG | + | chr3_2:7664938-7664957 | Msa0393560:intron | 40.0% |
TGTGTTTGGATTGAGGGTTT+AGG | + | chr3_2:7664944-7664963 | Msa0393560:intron | 40.0% | |
TTTGGATTGAGGGTTTAGGA+GGG | + | chr3_2:7664948-7664967 | Msa0393560:intron | 40.0% | |
TCAAACACTTAGGGTGTGTT+TGG | - | chr3_2:7665167-7665186 | None:intergenic | 40.0% | |
TTGTAGGAACAACTACTCTG+GGG | - | chr3_2:7665229-7665248 | None:intergenic | 40.0% | |
!! | AGGAAAAAGGTACTCCATTG+AGG | + | chr3_2:7665252-7665271 | Msa0393560:intron | 40.0% |
! | GATCAAAGTTTGTTCGTCTC+AGG | + | chr3_2:7665369-7665388 | Msa0393560:CDS | 40.0% |
!! | CAGCTCATTAAGAGTATCAG+AGG | + | chr3_2:7665501-7665520 | Msa0393560:CDS | 40.0% |
!! | TTAAGAGTATCAGAGGTTGG+CGG | + | chr3_2:7665508-7665527 | Msa0393560:CDS | 40.0% |
TGTAGATATCTCTGGCACTA+GGG | - | chr3_2:7665560-7665579 | None:intergenic | 40.0% | |
! | CTCGAAAGTGTAGATATCTC+TGG | - | chr3_2:7665568-7665587 | None:intergenic | 40.0% |
CAGAGATATCTACACTTTCG+AGG | + | chr3_2:7665566-7665585 | Msa0393560:CDS | 40.0% | |
TGAACTCGATATTGCTGCAT+CGG | - | chr3_2:7665600-7665619 | None:intergenic | 40.0% | |
CTATCATTGCTAGAACTAGG+TGG | - | chr3_2:7665852-7665871 | None:intergenic | 40.0% | |
CCACTATCATTGCTAGAACT+AGG | - | chr3_2:7665855-7665874 | None:intergenic | 40.0% | |
!! | CCTAGTTCTAGCAATGATAG+TGG | + | chr3_2:7665852-7665871 | Msa0393560:CDS | 40.0% |
!! | TCTAGCAATGATAGTGGAGT+AGG | + | chr3_2:7665858-7665877 | Msa0393560:CDS | 40.0% |
! | GTTTTGCCAAACGTGTACTA+CGG | - | chr3_2:7665896-7665915 | None:intergenic | 40.0% |
CGCTACTAGTAGTTTCAACA+AGG | + | chr3_2:7665983-7666002 | Msa0393560:CDS | 40.0% | |
TCAGAGCTCAAAAAGTAGCA+TGG | + | chr3_2:7666218-7666237 | Msa0393560:CDS | 40.0% | |
CAGAGCTCAAAAAGTAGCAT+GGG | + | chr3_2:7666219-7666238 | Msa0393560:CDS | 40.0% | |
TCATCCAGGGAAACCATTTA+TGG | - | chr3_2:7666654-7666673 | None:intergenic | 40.0% | |
CTCAAGGGCAAGAAGAAATT+CGG | - | chr3_2:7666743-7666762 | None:intergenic | 40.0% | |
! | TCGCGTACTAGGATATTTTC+CGG | - | chr3_2:7666805-7666824 | None:intergenic | 40.0% |
AATATCCTAGTACGCGAAGA+TGG | + | chr3_2:7666808-7666827 | Msa0393560:CDS | 40.0% | |
AAAGCAGGAAACTTGGATTG+CGG | - | chr3_2:7666920-7666939 | None:intergenic | 40.0% | |
TAGGAGTAAAGCAGGAAACT+TGG | - | chr3_2:7666927-7666946 | None:intergenic | 40.0% | |
CTCCTATTCTATTGTCTCTC+GGG | + | chr3_2:7666941-7666960 | Msa0393560:CDS | 40.0% | |
TCCTATTCTATTGTCTCTCG+GGG | + | chr3_2:7666942-7666961 | Msa0393560:CDS | 40.0% | |
CGAAAGATTAAGGCTGACAT+AGG | + | chr3_2:7666973-7666992 | Msa0393560:CDS | 40.0% | |
! | AGACATACTCCAACCGACTT+TGG | + | chr3_2:7656568-7656587 | Msa0393560:CDS | 45.0% |
GACTTTGGACCAACTCTTTC+AGG | + | chr3_2:7656583-7656602 | Msa0393560:CDS | 45.0% | |
TCATAATTTCCTGCCCTGCT+AGG | + | chr3_2:7656650-7656669 | Msa0393560:intron | 45.0% | |
AAAATGGCAATCCCCTCCAT+AGG | + | chr3_2:7656677-7656696 | Msa0393560:intron | 45.0% | |
TTCGCTCTCCCTTAATTCCT+CGG | - | chr3_2:7656984-7657003 | None:intergenic | 45.0% | |
AAGAGAAGCAGAGTACAGGA+TGG | + | chr3_2:7657009-7657028 | Msa0393560:intron | 45.0% | |
TGTCATAGCTCCATGTGATG+GGG | - | chr3_2:7657704-7657723 | None:intergenic | 45.0% | |
CTGAAAGCTGCAAGCAATCA+TGG | + | chr3_2:7657736-7657755 | Msa0393560:intron | 45.0% | |
GGCCATTTAGTGGCTAGAAA+AGG | + | chr3_2:7657778-7657797 | Msa0393560:intron | 45.0% | |
GATTCAAGGCAAAAACGCCA+TGG | + | chr3_2:7658035-7658054 | Msa0393560:intron | 45.0% | |
TACATTTGGCTGGTGTTCCA+TGG | - | chr3_2:7658055-7658074 | None:intergenic | 45.0% | |
ACACCAGCCAAATGTATCCA+TGG | + | chr3_2:7658059-7658078 | Msa0393560:intron | 45.0% | |
TCACCATGGATACATTTGGC+TGG | - | chr3_2:7658065-7658084 | None:intergenic | 45.0% | |
TGACATTGGATTCGAAGCTG+TGG | - | chr3_2:7659094-7659113 | None:intergenic | 45.0% | |
AATGCATGCGGCAACACTTT+AGG | + | chr3_2:7659256-7659275 | Msa0393560:intron | 45.0% | |
! | ACGTGGGTTAAGGTGCTATA+CGG | - | chr3_2:7659298-7659317 | None:intergenic | 45.0% |
! | CCAAATTCACACGTGGGTTA+AGG | - | chr3_2:7659308-7659327 | None:intergenic | 45.0% |
CCTTAACCCACGTGTGAATT+TGG | + | chr3_2:7659305-7659324 | Msa0393560:intron | 45.0% | |
GTAGCACCAAATTCACACGT+GGG | - | chr3_2:7659314-7659333 | None:intergenic | 45.0% | |
AGTAGCACCAAATTCACACG+TGG | - | chr3_2:7659315-7659334 | None:intergenic | 45.0% | |
!! | ATGGTGTCGTGTGGATTAGA+AGG | - | chr3_2:7659566-7659585 | None:intergenic | 45.0% |
TCGCGGACATCCGATAAATT+TGG | - | chr3_2:7659782-7659801 | None:intergenic | 45.0% | |
AATTTATCGGATGTCCGCGA+AGG | + | chr3_2:7659782-7659801 | Msa0393560:intron | 45.0% | |
ATTTATCGGATGTCCGCGAA+GGG | + | chr3_2:7659783-7659802 | Msa0393560:intron | 45.0% | |
CGGACGAGGAAAAAATGCAA+AGG | + | chr3_2:7660244-7660263 | Msa0393560:intron | 45.0% | |
AACCATATCCCTCTAAGTGG+GGG | + | chr3_2:7660392-7660411 | Msa0393560:intron | 45.0% | |
! | GATGTTGGGTTGCAGACTAT+TGG | - | chr3_2:7660514-7660533 | Msa0393570:CDS | 45.0% |
! | CCTACTGCATTGGTGATTAC+AGG | - | chr3_2:7660536-7660555 | Msa0393570:intron | 45.0% |
CCTGTAATCACCAATGCAGT+AGG | + | chr3_2:7660533-7660552 | Msa0393560:intron | 45.0% | |
AGGTCTTCAAAGAGAAGAGC+TGG | + | chr3_2:7660553-7660572 | Msa0393560:intron | 45.0% | |
!!! | GTAGATTTTGGCTCCTTTGC+AGG | + | chr3_2:7660811-7660830 | Msa0393560:intron | 45.0% |
TGTTGGAATGTCTCTTGGGA+CGG | - | chr3_2:7660902-7660921 | Msa0393570:intron | 45.0% | |
!! | ACAAGTTAGGAGCATCTACG+AGG | + | chr3_2:7661072-7661091 | Msa0393560:intron | 45.0% |
ATGATGTGAACCTTTGCCGA+GGG | + | chr3_2:7661245-7661264 | Msa0393560:intron | 45.0% | |
! | TCGGAGCGCTTCTATATTCA+AGG | + | chr3_2:7661316-7661335 | Msa0393560:intron | 45.0% |
GGGATAGAACCTAAGCAATG+AGG | + | chr3_2:7661378-7661397 | Msa0393560:intron | 45.0% | |
! | GTCTTGCTCCCAAAGAGTTT+TGG | + | chr3_2:7661632-7661651 | Msa0393560:intron | 45.0% |
!! | GTTTGGTGCATGAAATGCGA+AGG | + | chr3_2:7661801-7661820 | Msa0393560:intron | 45.0% |
!! | AAGGTGCTTTAGAGAGAGAG+TGG | + | chr3_2:7661931-7661950 | Msa0393560:intron | 45.0% |
AGAGAGAGAGTGGTTAATGC+TGG | + | chr3_2:7661941-7661960 | Msa0393560:intron | 45.0% | |
GAGAGAGAGTGGTTAATGCT+GGG | + | chr3_2:7661942-7661961 | Msa0393560:intron | 45.0% | |
CTTCGAGCAAAGCAAGAGAA+TGG | + | chr3_2:7662176-7662195 | Msa0393560:intron | 45.0% | |
TAGGGACGACATCCAAATTC+AGG | - | chr3_2:7662419-7662438 | Msa0393570:CDS | 45.0% | |
TGAATTTGGATGTCGTCCCT+AGG | + | chr3_2:7662418-7662437 | Msa0393560:intron | 45.0% | |
GCAAAGTAAGAGGCAACCTA+GGG | - | chr3_2:7662437-7662456 | Msa0393570:CDS | 45.0% | |
AGACACGAAGGCAAAGTAAG+AGG | - | chr3_2:7662447-7662466 | Msa0393570:CDS | 45.0% | |
TCCATCCATCCATCCAACTT+TGG | - | chr3_2:7662632-7662651 | None:intergenic | 45.0% | |
GGCGGCATAAAGTCTAGATT+GGG | + | chr3_2:7662742-7662761 | Msa0393560:intron | 45.0% | |
TGAAATTGCACAGGGGATCA+AGG | + | chr3_2:7662947-7662966 | Msa0393560:intron | 45.0% | |
TATGAAGGTTGTTGGTGTGG+CGG | + | chr3_2:7662981-7663000 | Msa0393560:intron | 45.0% | |
GGTGCACCATGATATTAGAG+AGG | - | chr3_2:7663607-7663626 | None:intergenic | 45.0% | |
AGAAATGGCTTAGGATGCAG+TGG | - | chr3_2:7663933-7663952 | None:intergenic | 45.0% | |
TATGTCTACCATGCCAAGCT+TGG | - | chr3_2:7663967-7663986 | None:intergenic | 45.0% | |
ATATACCAAGCTCCAGCTTG+TGG | + | chr3_2:7663984-7664003 | Msa0393560:intron | 45.0% | |
TATACCAAGCTCCAGCTTGT+GGG | + | chr3_2:7663985-7664004 | Msa0393560:intron | 45.0% | |
CTGTCACAACAGAAAACAGC+TGG | - | chr3_2:7664091-7664110 | None:intergenic | 45.0% | |
!! | CAGCTGTTTTCTGTTGTGAC+AGG | + | chr3_2:7664089-7664108 | Msa0393560:intron | 45.0% |
GGATTTGGGAAGTGAATCTG+TGG | - | chr3_2:7664351-7664370 | None:intergenic | 45.0% | |
! | CTAAGGGTGTGTTTGGATTG+AGG | + | chr3_2:7664937-7664956 | Msa0393560:intron | 45.0% |
GTTTGGATTGAGGGTTTAGG+AGG | + | chr3_2:7664947-7664966 | Msa0393560:intron | 45.0% | |
TTGGATTGAGGGTTTAGGAG+GGG | + | chr3_2:7664949-7664968 | Msa0393560:intron | 45.0% | |
! | TTTGGATGGAGGGTATAGGA+GGG | - | chr3_2:7665149-7665168 | None:intergenic | 45.0% |
! | TGTGTTTGGATGGAGGGTAT+AGG | - | chr3_2:7665153-7665172 | None:intergenic | 45.0% |
TTAGGGTGTGTTTGGATGGA+GGG | - | chr3_2:7665159-7665178 | None:intergenic | 45.0% | |
ACACTTAGGGTGTGTTTGGA+TGG | - | chr3_2:7665163-7665182 | None:intergenic | 45.0% | |
CTAGAGGTCATAGTACATCG+CGG | + | chr3_2:7665320-7665339 | Msa0393560:CDS | 45.0% | |
CGCAGCAGAGTTCTCTTAAA+AGG | + | chr3_2:7665344-7665363 | Msa0393560:CDS | 45.0% | |
! | GAAGCCTGTTAGTTTGAAGC+AGG | + | chr3_2:7665411-7665430 | Msa0393560:CDS | 45.0% |
AGTGCCTGCTTCAAACTAAC+AGG | - | chr3_2:7665418-7665437 | None:intergenic | 45.0% | |
! | AGTTTGAAGCAGGCACTTAG+AGG | + | chr3_2:7665421-7665440 | Msa0393560:CDS | 45.0% |
TAGAGGATTGTGCATCTCTC+AGG | + | chr3_2:7665438-7665457 | Msa0393560:CDS | 45.0% | |
CATCTCTCAGGCATCAGAAA+TGG | + | chr3_2:7665450-7665469 | Msa0393560:CDS | 45.0% | |
GTGTAGATATCTCTGGCACT+AGG | - | chr3_2:7665561-7665580 | None:intergenic | 45.0% | |
GAACTCGATATTGCTGCATC+GGG | - | chr3_2:7665599-7665618 | None:intergenic | 45.0% | |
!! | AAGCTTGTTGCATTGACCAC+AGG | - | chr3_2:7665641-7665660 | None:intergenic | 45.0% |
GCTTCAACATCAGGTGAAAG+AGG | - | chr3_2:7665707-7665726 | None:intergenic | 45.0% | |
CTTTCACCTGATGTTGAAGC+TGG | + | chr3_2:7665707-7665726 | Msa0393560:intron | 45.0% | |
CAGTTCTTCAATGCCGGATA+AGG | + | chr3_2:7665794-7665813 | Msa0393560:intron | 45.0% | |
! | TTTTTCTCCCGGTCCTTATC+CGG | - | chr3_2:7665810-7665829 | None:intergenic | 45.0% |
AGTAGGGATCCAAGTAAACC+TGG | + | chr3_2:7666108-7666127 | Msa0393560:intron | 45.0% | |
GAGTATAGTACCAGTAGCAC+AGG | + | chr3_2:7666243-7666262 | Msa0393560:CDS | 45.0% | |
AGTGAAGAGGGCAATCTTAG+TGG | + | chr3_2:7666270-7666289 | Msa0393560:CDS | 45.0% | |
! | TGAGGCACTTTAGGCTGATA+AGG | + | chr3_2:7666385-7666404 | Msa0393560:intron | 45.0% |
TATGTCCATCTTCGCGTACT+AGG | - | chr3_2:7666816-7666835 | None:intergenic | 45.0% | |
!!! | ATAAGTAATTTTTTTTTTAT+AGG | + | chr3_2:7658659-7658678 | Msa0393560:intron | 5.0% |
!!! | TAAGTAATTTTTTTTTTATA+GGG | + | chr3_2:7658660-7658679 | Msa0393560:intron | 5.0% |
!!! | TGTAGGCGGTGTTTTAGCTC+TGG | - | chr3_2:7656470-7656489 | None:intergenic | 50.0% |
GTGAGGGAGTTCACTAGGTT+AGG | - | chr3_2:7656505-7656524 | None:intergenic | 50.0% | |
AACCTCAGCCTTTGTTGGGA+TGG | - | chr3_2:7656545-7656564 | None:intergenic | 50.0% | |
! | AGAGTTGGTCCAAAGTCGGT+TGG | - | chr3_2:7656580-7656599 | None:intergenic | 50.0% |
AATCCCCTCCATAGGTACCT+TGG | + | chr3_2:7656685-7656704 | Msa0393560:intron | 50.0% | |
CTGTACTCTGCTTCTCTTGC+AGG | - | chr3_2:7657007-7657026 | None:intergenic | 50.0% | |
CTGCAAGAGAAGCAGAGTAC+AGG | + | chr3_2:7657005-7657024 | Msa0393560:intron | 50.0% | |
AGTACGCTGTGGCCATTTAG+TGG | + | chr3_2:7657768-7657787 | Msa0393560:intron | 50.0% | |
TTTGCGAGCATATCACCCGT+CGG | + | chr3_2:7659044-7659063 | Msa0393560:intron | 50.0% | |
TGGATTCGAAGCTGTGGACT+CGG | - | chr3_2:7659088-7659107 | None:intergenic | 50.0% | |
TTGTAGTGAGGGGTCTTGCT+GGG | - | chr3_2:7659229-7659248 | None:intergenic | 50.0% | |
!! | TGGTGCTACTCAACAGCTGA+AGG | + | chr3_2:7659325-7659344 | Msa0393560:intron | 50.0% |
!! | GGTGCTACTCAACAGCTGAA+GGG | + | chr3_2:7659326-7659345 | Msa0393560:intron | 50.0% |
TTTATCGGATGTCCGCGAAG+GGG | + | chr3_2:7659784-7659803 | Msa0393560:intron | 50.0% | |
TTGCTAGATTTGCCCCTTCG+CGG | - | chr3_2:7659799-7659818 | None:intergenic | 50.0% | |
CCTACTGCATAGGTGAACAC+AGG | - | chr3_2:7659941-7659960 | None:intergenic | 50.0% | |
CCTGTGTTCACCTATGCAGT+AGG | + | chr3_2:7659938-7659957 | Msa0393560:intron | 50.0% | |
CTTGTCTGTCTGACCTGCAA+AGG | - | chr3_2:7660827-7660846 | Msa0393570:intron | 50.0% | |
TTGCAGGTCAGACAGACAAG+AGG | + | chr3_2:7660827-7660846 | Msa0393560:intron | 50.0% | |
GATGATGTGAACCTTTGCCG+AGG | + | chr3_2:7661244-7661263 | Msa0393560:intron | 50.0% | |
TCAAAACTCACCCTCGGCAA+AGG | - | chr3_2:7661258-7661277 | Msa0393570:CDS | 50.0% | |
TGGTAGGTACCCATGAAGGT+CGG | + | chr3_2:7661297-7661316 | Msa0393560:intron | 50.0% | |
AAGGGAGCTCACGATGAATG+CGG | + | chr3_2:7661357-7661376 | Msa0393560:intron | 50.0% | |
GAAATCCGCTTTGGTTGTGG+TGG | + | chr3_2:7661727-7661746 | Msa0393560:intron | 50.0% | |
TCCTACCACCACAACCAAAG+CGG | - | chr3_2:7661735-7661754 | Msa0393570:CDS | 50.0% | |
CATTACCCCTAAGTGCACAG+CGG | + | chr3_2:7661831-7661850 | Msa0393560:intron | 50.0% | |
ATTGACCGCTGTGCACTTAG+GGG | - | chr3_2:7661839-7661858 | Msa0393570:CDS | 50.0% | |
CATTGACCGCTGTGCACTTA+GGG | - | chr3_2:7661840-7661859 | Msa0393570:CDS | 50.0% | |
TCATTGACCGCTGTGCACTT+AGG | - | chr3_2:7661841-7661860 | Msa0393570:CDS | 50.0% | |
GGCAAAGTAAGAGGCAACCT+AGG | - | chr3_2:7662438-7662457 | Msa0393570:CDS | 50.0% | |
! | CAACAATGGTGGAGACACGA+AGG | - | chr3_2:7662459-7662478 | None:intergenic | 50.0% |
!! | AGATGATGGGAGGCCAAAGT+TGG | + | chr3_2:7662616-7662635 | Msa0393560:intron | 50.0% |
GCCAAAGTTGGATGGATGGA+TGG | + | chr3_2:7662628-7662647 | Msa0393560:intron | 50.0% | |
CGTTAGACTTACTGCGTGCA+AGG | - | chr3_2:7662657-7662676 | None:intergenic | 50.0% | |
CACGCAGTAAGTCTAACGAG+TGG | + | chr3_2:7662659-7662678 | Msa0393560:intron | 50.0% | |
GCAGTAAGTCTAACGAGTGG+CGG | + | chr3_2:7662662-7662681 | Msa0393560:intron | 50.0% | |
CGGCGGCATAAAGTCTAGAT+TGG | + | chr3_2:7662741-7662760 | Msa0393560:intron | 50.0% | |
TAGGGTTCACTGAAGCAGAC+TGG | + | chr3_2:7663526-7663545 | Msa0393560:intron | 50.0% | |
AGGGTTCACTGAAGCAGACT+GGG | + | chr3_2:7663527-7663546 | Msa0393560:intron | 50.0% | |
GTCTTTCTCTCTAGTCACGG+AGG | - | chr3_2:7664707-7664726 | None:intergenic | 50.0% | |
ATTGAGGGTTTAGGAGGGGA+AGG | + | chr3_2:7664953-7664972 | Msa0393560:intron | 50.0% | |
TTGAGGGTTTAGGAGGGGAA+GGG | + | chr3_2:7664954-7664973 | Msa0393560:intron | 50.0% | |
! | TTGGATGGAGGGTATAGGAG+GGG | - | chr3_2:7665148-7665167 | None:intergenic | 50.0% |
! | GTTTGGATGGAGGGTATAGG+AGG | - | chr3_2:7665150-7665169 | None:intergenic | 50.0% |
CTTAGGGTGTGTTTGGATGG+AGG | - | chr3_2:7665160-7665179 | None:intergenic | 50.0% | |
!! | TCGTCTCAGGCATCGAGAAT+TGG | + | chr3_2:7665382-7665401 | Msa0393560:CDS | 50.0% |
TGCTTGCCAGCTTCAACATC+AGG | - | chr3_2:7665716-7665735 | None:intergenic | 50.0% | |
!! | ACGAACCTAGGAAGTGCTAG+AGG | + | chr3_2:7665743-7665762 | Msa0393560:intron | 50.0% |
TCTGACCTCTAGCACTTCCT+AGG | - | chr3_2:7665751-7665770 | None:intergenic | 50.0% | |
CTTCAATGCCGGATAAGGAC+CGG | + | chr3_2:7665799-7665818 | Msa0393560:CDS | 50.0% | |
TTCAATGCCGGATAAGGACC+GGG | + | chr3_2:7665800-7665819 | Msa0393560:CDS | 50.0% | |
CTCAAGCCGTAGTACACGTT+TGG | + | chr3_2:7665887-7665906 | Msa0393560:CDS | 50.0% | |
ACTACTAGTAGCGCAGCTTG+AGG | - | chr3_2:7665976-7665995 | None:intergenic | 50.0% | |
TTCACTGATGCCTGTGCTAC+TGG | - | chr3_2:7666256-7666275 | None:intergenic | 50.0% | |
TAGCACAGGCATCAGTGAAG+AGG | + | chr3_2:7666257-7666276 | Msa0393560:CDS | 50.0% | |
AGCACAGGCATCAGTGAAGA+GGG | + | chr3_2:7666258-7666277 | Msa0393560:CDS | 50.0% | |
!! | CTTAGTGGTTCGAGTTGCAG+TGG | + | chr3_2:7666285-7666304 | Msa0393560:CDS | 50.0% |
!! | GTTTTGACATGTGCGGCTGT+CGG | - | chr3_2:7666311-7666330 | None:intergenic | 50.0% |
GCCCCGAGAGACAATAGAAT+AGG | - | chr3_2:7666946-7666965 | None:intergenic | 50.0% | |
GCTGACATAGGTGCTCAAGT+CGG | + | chr3_2:7666985-7667004 | Msa0393560:CDS | 50.0% | |
! | CTCTAGGGAACTACGTCCTG+TGG | - | chr3_2:7656443-7656462 | None:intergenic | 55.0% |
CGTGAAGGCCATCCCAACAA+AGG | + | chr3_2:7656534-7656553 | Msa0393560:CDS | 55.0% | |
! | ACCGCCAAGGTACCTATGGA+GGG | - | chr3_2:7656692-7656711 | None:intergenic | 55.0% |
TCAGCAATTGGTCACCGCCA+AGG | - | chr3_2:7656705-7656724 | None:intergenic | 55.0% | |
ATCCTACCAGCCCCATCACA+TGG | + | chr3_2:7657691-7657710 | Msa0393560:intron | 55.0% | |
! | ATAGCTCCATGTGATGGGGC+TGG | - | chr3_2:7657700-7657719 | None:intergenic | 55.0% |
TTGCGAGCATATCACCCGTC+GGG | + | chr3_2:7659045-7659064 | Msa0393560:intron | 55.0% | |
GTTGTAGTGAGGGGTCTTGC+TGG | - | chr3_2:7659230-7659249 | None:intergenic | 55.0% | |
!! | GTGGAGAGTATGGTGTCGTG+TGG | - | chr3_2:7659575-7659594 | None:intergenic | 55.0% |
GTCAAACACACAGACGGACG+AGG | + | chr3_2:7660230-7660249 | Msa0393560:intron | 55.0% | |
GTAACAGGCCCCCACTTAGA+GGG | - | chr3_2:7660403-7660422 | None:intergenic | 55.0% | |
TGTAACAGGCCCCCACTTAG+AGG | - | chr3_2:7660404-7660423 | None:intergenic | 55.0% | |
CTAAGTGGGGGCCTGTTACA+TGG | + | chr3_2:7660404-7660423 | Msa0393560:intron | 55.0% | |
!! | AGAAGCGCTCCGACCTTCAT+GGG | - | chr3_2:7661309-7661328 | Msa0393570:CDS | 55.0% |
!! | TAGAAGCGCTCCGACCTTCA+TGG | - | chr3_2:7661310-7661329 | Msa0393570:CDS | 55.0% |
AGGGAGCTCACGATGAATGC+GGG | + | chr3_2:7661358-7661377 | Msa0393560:intron | 55.0% | |
GTGTTTGGAGAGGGCCCAAA+TGG | - | chr3_2:7661564-7661583 | Msa0393570:CDS | 55.0% | |
TCCGCTTTGGTTGTGGTGGT+AGG | + | chr3_2:7661731-7661750 | Msa0393560:intron | 55.0% | |
GATGGGAGGCCAAAGTTGGA+TGG | + | chr3_2:7662620-7662639 | Msa0393560:intron | 55.0% | |
GGAGGCCAAAGTTGGATGGA+TGG | + | chr3_2:7662624-7662643 | Msa0393560:intron | 55.0% | |
GGCGACGGAAAACACAACGA+CGG | + | chr3_2:7662683-7662702 | Msa0393560:intron | 55.0% | |
CAACGACGACAAATGCACGG+CGG | + | chr3_2:7662724-7662743 | Msa0393560:intron | 55.0% | |
! | GTTGTTGGTGTGGCGGAGAA+CGG | + | chr3_2:7662988-7663007 | Msa0393560:intron | 55.0% |
TTCACTGAAGCAGACTGGGC+AGG | + | chr3_2:7663531-7663550 | Msa0393560:intron | 55.0% | |
! | GGGCAGGCTGTGTTGATACA+AGG | + | chr3_2:7663547-7663566 | Msa0393560:intron | 55.0% |
TGTAACAGCCTCCCACAAGC+TGG | - | chr3_2:7663999-7664018 | None:intergenic | 55.0% | |
! | GGGACGGACTTGACTACTTC+CGG | - | chr3_2:7664766-7664785 | None:intergenic | 55.0% |
! | TGGAGGGTATAGGAGGGGAA+GGG | - | chr3_2:7665143-7665162 | None:intergenic | 55.0% |
! | ATGGAGGGTATAGGAGGGGA+AGG | - | chr3_2:7665144-7665163 | None:intergenic | 55.0% |
CGTGCGATTCAACAGCAGCA+TGG | + | chr3_2:7666351-7666370 | Msa0393560:intron | 55.0% | |
TGGATTGCGGCATCTGCATC+TGG | - | chr3_2:7666907-7666926 | None:intergenic | 55.0% | |
GGCCATCCCAACAAAGGCTG+AGG | + | chr3_2:7656540-7656559 | Msa0393560:CDS | 60.0% | |
! | CCGCCAAGGTACCTATGGAG+GGG | - | chr3_2:7656691-7656710 | None:intergenic | 60.0% |
CCCCTCCATAGGTACCTTGG+CGG | + | chr3_2:7656688-7656707 | Msa0393560:intron | 60.0% | |
! | CACCGCCAAGGTACCTATGG+AGG | - | chr3_2:7656693-7656712 | None:intergenic | 60.0% |
! | GGTCACCGCCAAGGTACCTA+TGG | - | chr3_2:7656696-7656715 | None:intergenic | 60.0% |
! | CTCCATGTGATGGGGCTGGT+AGG | - | chr3_2:7657696-7657715 | None:intergenic | 60.0% |
GGCCCCCACTTAGAGGGATA+TGG | - | chr3_2:7660397-7660416 | None:intergenic | 60.0% | |
AGTCTAACGAGTGGCGGCGA+CGG | + | chr3_2:7662668-7662687 | Msa0393560:intron | 60.0% | |
ACCAAGCTCCAGCTTGTGGG+AGG | + | chr3_2:7663988-7664007 | Msa0393560:intron | 60.0% | |
AGGGTTTAGGAGGGGAAGGG+AGG | + | chr3_2:7664957-7664976 | Msa0393560:intron | 60.0% | |
GGGTTTAGGAGGGGAAGGGA+GGG | + | chr3_2:7664958-7664977 | Msa0393560:intron | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+GGG | + | chr3_2:7664959-7664978 | Msa0393560:intron | 60.0% | |
GGTATAGGAGGGGAAGGGAG+GGG | - | chr3_2:7665138-7665157 | None:intergenic | 60.0% | |
GGGTATAGGAGGGGAAGGGA+GGG | - | chr3_2:7665139-7665158 | None:intergenic | 60.0% | |
AGGGTATAGGAGGGGAAGGG+AGG | - | chr3_2:7665140-7665159 | None:intergenic | 60.0% | |
AGTATCAGAGGTTGGCGGCG+CGG | + | chr3_2:7665513-7665532 | Msa0393560:CDS | 60.0% | |
TGGCGGCGCGGTAAAGAAGT+TGG | + | chr3_2:7665525-7665544 | Msa0393560:CDS | 60.0% | |
! | GTTGGTGTGGCGGAGAACGG+CGG | + | chr3_2:7662991-7663010 | Msa0393560:intron | 65.0% |
GCCTCCCACAAGCTGGAGCT+TGG | - | chr3_2:7663992-7664011 | None:intergenic | 65.0% | |
TTAGGAGGGGAAGGGAGGGG+AGG | + | chr3_2:7664962-7664981 | Msa0393560:intron | 65.0% | |
TAGGAGGGGAAGGGAGGGGA+GGG | + | chr3_2:7664963-7664982 | Msa0393560:intron | 65.0% | |
TAGGAGGGGAAGGGAGGGGA+GGG | - | chr3_2:7664963-7664982 | None:intergenic | 65.0% | |
ATAGGAGGGGAAGGGAGGGG+AGG | - | chr3_2:7665135-7665154 | None:intergenic | 65.0% | |
GGAGAACGGCGGCGACAGGA+AGG | + | chr3_2:7663002-7663021 | Msa0393560:intron | 70.0% | |
TGGCGGAGAACGGCGGCGAC+AGG | + | chr3_2:7662998-7663017 | Msa0393560:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 7656412 | 7667020 | 7656412 | ID=Msa0393560;Name=Msa0393560 |
chr3_2 | mRNA | 7656412 | 7667020 | 7656412 | ID=Msa0393560-mRNA-1;Parent=Msa0393560;Name=Msa0393560-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|0.8|1|1|5|0|420 |
chr3_2 | exon | 7656412 | 7656604 | 7656412 | ID=Msa0393560-mRNA-1:exon:1968;Parent=Msa0393560-mRNA-1 |
chr3_2 | exon | 7665254 | 7665587 | 7665254 | ID=Msa0393560-mRNA-1:exon:1969;Parent=Msa0393560-mRNA-1 |
chr3_2 | exon | 7665797 | 7666030 | 7665797 | ID=Msa0393560-mRNA-1:exon:1970;Parent=Msa0393560-mRNA-1 |
chr3_2 | exon | 7666113 | 7666322 | 7666113 | ID=Msa0393560-mRNA-1:exon:1971;Parent=Msa0393560-mRNA-1 |
chr3_2 | exon | 7666729 | 7667020 | 7666729 | ID=Msa0393560-mRNA-1:exon:1972;Parent=Msa0393560-mRNA-1 |
chr3_2 | CDS | 7656412 | 7656604 | 7656412 | ID=Msa0393560-mRNA-1:cds;Parent=Msa0393560-mRNA-1 |
chr3_2 | CDS | 7665254 | 7665587 | 7665254 | ID=Msa0393560-mRNA-1:cds;Parent=Msa0393560-mRNA-1 |
chr3_2 | CDS | 7665797 | 7666030 | 7665797 | ID=Msa0393560-mRNA-1:cds;Parent=Msa0393560-mRNA-1 |
chr3_2 | CDS | 7666113 | 7666322 | 7666113 | ID=Msa0393560-mRNA-1:cds;Parent=Msa0393560-mRNA-1 |
chr3_2 | CDS | 7666729 | 7667020 | 7666729 | ID=Msa0393560-mRNA-1:cds;Parent=Msa0393560-mRNA-1 |
Gene Sequence |
Protein sequence |