Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0394050 | KEH32876.1 | 91.121 | 428 | 30 | 1 | 1 | 420 | 1 | 428 | 0.0 | 783 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0394050 | sp|Q9FG77|WRKY2_ARATH | 49.454 | 366 | 145 | 12 | 1 | 350 | 1 | 342 | 2.15e-84 | 278 |
Msa0394050 | sp|Q9FG77|WRKY2_ARATH | 58.333 | 60 | 24 | 1 | 272 | 330 | 487 | 546 | 1.14e-12 | 74.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0394050 | A0A072UU65 | 91.121 | 428 | 30 | 1 | 1 | 420 | 1 | 428 | 0.0 | 783 |
Gene ID | Type | Classification |
---|---|---|
Msa0394050 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0394050 | MtrunA17_Chr3g0079691 | 91.121 | 428 | 30 | 1 | 1 | 420 | 1 | 428 | 0.0 | 783 |
Msa0394050 | MtrunA17_Chr3g0079691 | 58.333 | 60 | 24 | 1 | 272 | 330 | 495 | 554 | 2.57e-14 | 75.9 |
Msa0394050 | MtrunA17_Chr3g0101131 | 41.860 | 258 | 108 | 8 | 109 | 335 | 60 | 306 | 5.56e-46 | 169 |
Msa0394050 | MtrunA17_Chr3g0101131 | 58.333 | 60 | 24 | 1 | 272 | 330 | 415 | 474 | 1.60e-15 | 79.3 |
Msa0394050 | MtrunA17_Chr5g0445311 | 39.344 | 244 | 120 | 5 | 109 | 340 | 41 | 268 | 1.75e-40 | 153 |
Msa0394050 | MtrunA17_Chr5g0445311 | 58.333 | 60 | 24 | 1 | 272 | 330 | 364 | 423 | 1.49e-15 | 79.3 |
Msa0394050 | MtrunA17_Chr3g0106491 | 41.228 | 228 | 108 | 6 | 110 | 336 | 60 | 262 | 1.05e-37 | 145 |
Msa0394050 | MtrunA17_Chr3g0106491 | 55.556 | 72 | 30 | 2 | 272 | 342 | 365 | 435 | 1.75e-14 | 75.9 |
Msa0394050 | MtrunA17_Chr7g0249311 | 50.289 | 173 | 74 | 4 | 203 | 371 | 110 | 274 | 4.13e-37 | 145 |
Msa0394050 | MtrunA17_Chr7g0249311 | 51.389 | 72 | 34 | 1 | 272 | 342 | 392 | 463 | 3.34e-14 | 75.5 |
Msa0394050 | MtrunA17_Chr5g0432161 | 39.592 | 245 | 95 | 7 | 112 | 330 | 85 | 302 | 4.41e-36 | 141 |
Msa0394050 | MtrunA17_Chr5g0432161 | 61.194 | 67 | 24 | 2 | 272 | 337 | 421 | 486 | 5.28e-17 | 84.0 |
Msa0394050 | MtrunA17_Chr7g0218081 | 84.848 | 66 | 10 | 0 | 270 | 335 | 226 | 291 | 2.83e-32 | 130 |
Msa0394050 | MtrunA17_Chr7g0218081 | 57.895 | 57 | 23 | 1 | 272 | 327 | 410 | 466 | 1.54e-13 | 73.2 |
Msa0394050 | MtrunA17_Chr5g0418191 | 64.583 | 96 | 30 | 2 | 254 | 348 | 136 | 228 | 3.99e-31 | 125 |
Msa0394050 | MtrunA17_Chr5g0418191 | 58.333 | 60 | 24 | 1 | 272 | 330 | 320 | 379 | 5.24e-14 | 74.3 |
Msa0394050 | MtrunA17_Chr7g0249301 | 51.128 | 133 | 40 | 3 | 265 | 390 | 55 | 169 | 7.55e-31 | 123 |
Msa0394050 | MtrunA17_Chr7g0249301 | 58.333 | 60 | 24 | 1 | 272 | 330 | 292 | 351 | 5.50e-14 | 73.6 |
Msa0394050 | MtrunA17_Chr7g0263531 | 78.788 | 66 | 14 | 0 | 270 | 335 | 187 | 252 | 1.19e-28 | 118 |
Msa0394050 | MtrunA17_Chr7g0263531 | 57.627 | 59 | 24 | 1 | 273 | 330 | 362 | 420 | 4.28e-14 | 74.3 |
Msa0394050 | MtrunA17_Chr7g0243891 | 32.530 | 332 | 192 | 9 | 112 | 423 | 56 | 375 | 2.28e-28 | 118 |
Msa0394050 | MtrunA17_Chr7g0243891 | 53.333 | 60 | 27 | 1 | 272 | 330 | 374 | 433 | 7.08e-12 | 67.8 |
Msa0394050 | MtrunA17_Chr4g0004911 | 35.802 | 243 | 115 | 8 | 102 | 335 | 38 | 248 | 3.25e-27 | 114 |
Msa0394050 | MtrunA17_Chr4g0004911 | 55.000 | 60 | 26 | 1 | 272 | 330 | 336 | 395 | 4.56e-13 | 71.6 |
Msa0394050 | MtrunA17_Chr4g0042831 | 60.976 | 82 | 29 | 2 | 254 | 334 | 129 | 208 | 1.39e-23 | 102 |
Msa0394050 | MtrunA17_Chr4g0042831 | 48.780 | 82 | 40 | 2 | 272 | 351 | 278 | 359 | 2.26e-14 | 75.1 |
Msa0394050 | MtrunA17_Chr5g0432071 | 60.938 | 64 | 25 | 0 | 272 | 335 | 104 | 167 | 1.22e-20 | 90.5 |
Msa0394050 | MtrunA17_Chr5g0447701 | 61.667 | 60 | 23 | 0 | 271 | 330 | 91 | 150 | 4.30e-20 | 92.4 |
Msa0394050 | MtrunA17_Chr5g0447701 | 43.636 | 110 | 47 | 5 | 238 | 341 | 220 | 320 | 1.25e-14 | 75.9 |
Msa0394050 | MtrunA17_Chr4g0051881 | 57.534 | 73 | 30 | 1 | 272 | 343 | 178 | 250 | 1.35e-18 | 87.0 |
Msa0394050 | MtrunA17_Chr1g0194481 | 54.054 | 74 | 33 | 1 | 272 | 344 | 158 | 231 | 1.54e-18 | 86.7 |
Msa0394050 | MtrunA17_Chr7g0270191 | 57.353 | 68 | 28 | 1 | 272 | 338 | 145 | 212 | 2.21e-17 | 82.8 |
Msa0394050 | MtrunA17_Chr2g0294231 | 57.812 | 64 | 26 | 1 | 272 | 334 | 203 | 266 | 4.95e-17 | 83.2 |
Msa0394050 | MtrunA17_Chr2g0284321 | 53.030 | 66 | 29 | 2 | 269 | 332 | 32 | 97 | 5.84e-17 | 80.1 |
Msa0394050 | MtrunA17_Chr5g0418781 | 64.912 | 57 | 19 | 1 | 272 | 327 | 124 | 180 | 7.68e-17 | 80.9 |
Msa0394050 | MtrunA17_Chr5g0443131 | 59.375 | 64 | 25 | 1 | 272 | 334 | 157 | 220 | 9.65e-17 | 81.3 |
Msa0394050 | MtrunA17_Chr8g0335811 | 61.404 | 57 | 21 | 1 | 272 | 327 | 154 | 210 | 1.33e-16 | 79.3 |
Msa0394050 | MtrunA17_Chr7g0248721 | 36.842 | 152 | 74 | 6 | 190 | 328 | 55 | 197 | 1.39e-16 | 79.0 |
Msa0394050 | MtrunA17_Chr2g0288871 | 44.086 | 93 | 50 | 2 | 241 | 331 | 274 | 366 | 1.77e-16 | 82.4 |
Msa0394050 | MtrunA17_Chr4g0074001 | 51.351 | 74 | 31 | 2 | 265 | 337 | 356 | 425 | 2.12e-16 | 82.0 |
Msa0394050 | MtrunA17_Chr4g0074001 | 54.054 | 74 | 31 | 2 | 266 | 338 | 180 | 251 | 1.27e-15 | 79.7 |
Msa0394050 | MtrunA17_Chr6g0468181 | 52.113 | 71 | 34 | 0 | 288 | 358 | 18 | 88 | 1.12e-15 | 73.6 |
Msa0394050 | MtrunA17_Chr4g0068541 | 52.174 | 69 | 32 | 1 | 272 | 339 | 208 | 276 | 1.51e-15 | 79.0 |
Msa0394050 | MtrunA17_Chr7g0224801 | 53.448 | 58 | 26 | 1 | 272 | 328 | 93 | 150 | 1.58e-15 | 74.7 |
Msa0394050 | MtrunA17_Chr8g0387501 | 48.780 | 82 | 36 | 5 | 263 | 341 | 121 | 199 | 3.12e-15 | 76.3 |
Msa0394050 | MtrunA17_Chr2g0289181 | 48.611 | 72 | 35 | 2 | 272 | 341 | 14 | 85 | 3.94e-15 | 75.1 |
Msa0394050 | MtrunA17_Chr8g0379461 | 37.391 | 115 | 57 | 4 | 261 | 367 | 65 | 172 | 5.00e-15 | 75.1 |
Msa0394050 | MtrunA17_Chr1g0188941 | 51.613 | 62 | 29 | 1 | 272 | 332 | 51 | 112 | 5.49e-15 | 71.2 |
Msa0394050 | MtrunA17_Chr8g0387981 | 51.351 | 74 | 28 | 3 | 256 | 325 | 120 | 189 | 9.43e-15 | 75.9 |
Msa0394050 | MtrunA17_Chr4g0075201 | 41.053 | 95 | 54 | 2 | 241 | 333 | 236 | 330 | 1.16e-14 | 76.6 |
Msa0394050 | MtrunA17_Chr8g0386241 | 51.724 | 58 | 27 | 1 | 272 | 328 | 103 | 160 | 1.23e-14 | 72.4 |
Msa0394050 | MtrunA17_Chr8g0383351 | 56.140 | 57 | 24 | 1 | 272 | 327 | 160 | 216 | 1.48e-14 | 73.2 |
Msa0394050 | MtrunA17_Chr3g0129361 | 56.140 | 57 | 24 | 1 | 272 | 327 | 144 | 200 | 1.99e-14 | 72.8 |
Msa0394050 | MtrunA17_Chr4g0001361 | 34.507 | 142 | 81 | 4 | 268 | 406 | 158 | 290 | 2.36e-14 | 74.3 |
Msa0394050 | MtrunA17_Chr5g0447711 | 50.847 | 59 | 29 | 0 | 272 | 330 | 83 | 141 | 3.54e-14 | 73.6 |
Msa0394050 | MtrunA17_Chr3g0129321 | 55.000 | 60 | 26 | 1 | 272 | 330 | 118 | 177 | 3.63e-14 | 71.6 |
Msa0394050 | MtrunA17_Chr7g0270831 | 54.098 | 61 | 26 | 2 | 273 | 331 | 217 | 277 | 5.78e-14 | 73.9 |
Msa0394050 | MtrunA17_Chr7g0238921 | 51.429 | 70 | 33 | 1 | 263 | 331 | 115 | 184 | 5.85e-14 | 72.8 |
Msa0394050 | MtrunA17_Chr3g0099641 | 42.683 | 82 | 44 | 3 | 273 | 352 | 252 | 332 | 6.13e-14 | 73.9 |
Msa0394050 | MtrunA17_Chr1g0150801 | 51.724 | 58 | 27 | 1 | 272 | 328 | 102 | 159 | 8.32e-14 | 69.3 |
Msa0394050 | MtrunA17_Chr7g0270051 | 53.846 | 65 | 27 | 3 | 268 | 330 | 50 | 113 | 9.72e-14 | 71.6 |
Msa0394050 | MtrunA17_Chr1g0202461 | 50.685 | 73 | 33 | 3 | 271 | 341 | 260 | 331 | 1.67e-13 | 72.4 |
Msa0394050 | MtrunA17_Chr3g0126391 | 53.333 | 60 | 24 | 2 | 270 | 325 | 131 | 190 | 2.29e-13 | 71.2 |
Msa0394050 | MtrunA17_Chr2g0302391 | 38.947 | 95 | 55 | 3 | 242 | 334 | 182 | 275 | 1.15e-12 | 70.1 |
Msa0394050 | MtrunA17_Chr7g0228941 | 47.368 | 57 | 28 | 2 | 273 | 327 | 53 | 109 | 1.78e-12 | 64.3 |
Msa0394050 | MtrunA17_Chr2g0293481 | 42.857 | 91 | 46 | 4 | 273 | 358 | 268 | 357 | 2.08e-12 | 69.3 |
Msa0394050 | MtrunA17_Chr3g0136961 | 34.211 | 114 | 67 | 4 | 264 | 375 | 130 | 237 | 2.15e-12 | 67.8 |
Msa0394050 | MtrunA17_Chr8g0347251 | 51.724 | 58 | 24 | 2 | 272 | 325 | 136 | 193 | 2.46e-12 | 68.6 |
Msa0394050 | MtrunA17_Chr4g0071521 | 36.782 | 87 | 52 | 3 | 243 | 327 | 217 | 302 | 3.29e-12 | 67.8 |
Msa0394050 | MtrunA17_Chr2g0322391 | 42.683 | 82 | 44 | 3 | 273 | 352 | 350 | 430 | 3.33e-12 | 68.9 |
Msa0394050 | MtrunA17_Chr2g0319961 | 48.000 | 75 | 35 | 3 | 270 | 342 | 78 | 150 | 3.59e-12 | 66.6 |
Msa0394050 | MtrunA17_Chr8g0383251 | 49.275 | 69 | 34 | 1 | 272 | 339 | 108 | 176 | 3.80e-12 | 65.1 |
Msa0394050 | MtrunA17_Chr1g0184691 | 52.459 | 61 | 27 | 2 | 273 | 331 | 294 | 354 | 3.92e-12 | 67.8 |
Msa0394050 | MtrunA17_Chr4g0051181 | 51.667 | 60 | 27 | 2 | 273 | 330 | 244 | 303 | 4.52e-12 | 68.2 |
Msa0394050 | MtrunA17_Chr2g0333851 | 49.180 | 61 | 29 | 2 | 272 | 330 | 169 | 229 | 4.61e-12 | 67.4 |
Msa0394050 | MtrunA17_Chr4g0060271 | 40.000 | 100 | 55 | 4 | 236 | 330 | 216 | 315 | 4.87e-12 | 68.6 |
Msa0394050 | MtrunA17_Chr1g0147881 | 54.386 | 57 | 24 | 2 | 273 | 327 | 263 | 319 | 4.98e-12 | 67.4 |
Msa0394050 | MtrunA17_Chr4g0053281 | 50.877 | 57 | 26 | 2 | 273 | 327 | 267 | 323 | 6.32e-12 | 67.0 |
Msa0394050 | MtrunA17_Chr7g0275531 | 41.026 | 78 | 40 | 3 | 264 | 335 | 110 | 187 | 6.49e-12 | 67.0 |
Msa0394050 | MtrunA17_Chr1g0150281 | 38.318 | 107 | 60 | 4 | 273 | 375 | 141 | 245 | 7.65e-12 | 66.2 |
Msa0394050 | MtrunA17_Chr4g0009881 | 50.847 | 59 | 28 | 1 | 272 | 330 | 17 | 74 | 9.69e-12 | 62.0 |
Msa0394050 | MtrunA17_Chr8g0348311 | 49.315 | 73 | 34 | 3 | 271 | 341 | 154 | 225 | 1.53e-11 | 65.9 |
Msa0394050 | MtrunA17_Chr7g0248691 | 50.000 | 62 | 29 | 2 | 271 | 330 | 153 | 214 | 2.00e-11 | 65.5 |
Msa0394050 | MtrunA17_Chr7g0216891 | 47.826 | 69 | 33 | 3 | 263 | 328 | 209 | 277 | 2.16e-11 | 66.2 |
Msa0394050 | MtrunA17_Chr4g0025061 | 45.312 | 64 | 33 | 2 | 273 | 334 | 361 | 424 | 2.88e-11 | 66.2 |
Msa0394050 | MtrunA17_Chr5g0401821 | 50.877 | 57 | 26 | 2 | 273 | 327 | 200 | 256 | 3.80e-11 | 63.9 |
Msa0394050 | MtrunA17_Chr1g0150271 | 45.902 | 61 | 31 | 2 | 272 | 330 | 101 | 161 | 5.48e-11 | 63.2 |
Msa0394050 | MtrunA17_Chr3g0139021 | 45.902 | 61 | 31 | 2 | 273 | 331 | 315 | 375 | 8.79e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0394050 | AT5G56270.1 | 49.454 | 366 | 145 | 12 | 1 | 350 | 1 | 342 | 2.19e-85 | 278 |
Msa0394050 | AT5G56270.1 | 58.333 | 60 | 24 | 1 | 272 | 330 | 487 | 546 | 1.16e-13 | 74.3 |
Msa0394050 | AT4G26440.1 | 44.625 | 307 | 93 | 9 | 64 | 369 | 44 | 274 | 4.87e-58 | 202 |
Msa0394050 | AT4G26440.1 | 48.571 | 70 | 35 | 1 | 272 | 340 | 372 | 441 | 1.07e-12 | 70.9 |
Msa0394050 | AT4G26640.7 | 40.824 | 267 | 147 | 7 | 113 | 374 | 14 | 274 | 4.07e-42 | 158 |
Msa0394050 | AT4G26640.7 | 56.667 | 60 | 25 | 1 | 272 | 330 | 341 | 400 | 6.63e-14 | 74.7 |
Msa0394050 | AT4G26640.2 | 40.824 | 267 | 147 | 7 | 113 | 374 | 54 | 314 | 4.44e-42 | 158 |
Msa0394050 | AT4G26640.2 | 56.667 | 60 | 25 | 1 | 272 | 330 | 381 | 440 | 6.27e-14 | 74.7 |
Msa0394050 | AT4G26640.1 | 38.776 | 245 | 139 | 7 | 135 | 374 | 4 | 242 | 4.54e-31 | 126 |
Msa0394050 | AT4G26640.1 | 56.667 | 60 | 25 | 1 | 272 | 330 | 309 | 368 | 7.46e-14 | 74.3 |
Msa0394050 | AT1G13960.1 | 38.075 | 239 | 92 | 9 | 98 | 335 | 109 | 292 | 2.01e-30 | 124 |
Msa0394050 | AT1G13960.1 | 56.667 | 60 | 25 | 1 | 272 | 330 | 409 | 468 | 7.38e-14 | 74.3 |
Msa0394050 | AT4G26640.5 | 72.368 | 76 | 18 | 1 | 267 | 339 | 27 | 102 | 1.94e-29 | 120 |
Msa0394050 | AT4G26640.5 | 56.667 | 60 | 25 | 1 | 272 | 330 | 205 | 264 | 6.38e-14 | 73.9 |
Msa0394050 | AT4G26640.6 | 72.368 | 76 | 18 | 1 | 267 | 339 | 27 | 102 | 1.94e-29 | 120 |
Msa0394050 | AT4G26640.6 | 56.667 | 60 | 25 | 1 | 272 | 330 | 205 | 264 | 6.38e-14 | 73.9 |
Msa0394050 | AT4G26640.4 | 72.368 | 76 | 18 | 1 | 267 | 339 | 27 | 102 | 1.94e-29 | 120 |
Msa0394050 | AT4G26640.4 | 56.667 | 60 | 25 | 1 | 272 | 330 | 205 | 264 | 6.38e-14 | 73.9 |
Msa0394050 | AT4G26640.3 | 72.368 | 76 | 18 | 1 | 267 | 339 | 27 | 102 | 1.94e-29 | 120 |
Msa0394050 | AT4G26640.3 | 56.667 | 60 | 25 | 1 | 272 | 330 | 205 | 264 | 6.38e-14 | 73.9 |
Msa0394050 | AT3G01080.3 | 72.857 | 70 | 18 | 1 | 270 | 339 | 203 | 271 | 2.24e-28 | 115 |
Msa0394050 | AT2G38470.1 | 86.441 | 59 | 8 | 0 | 272 | 330 | 184 | 242 | 7.01e-28 | 117 |
Msa0394050 | AT2G38470.1 | 55.714 | 70 | 29 | 2 | 272 | 340 | 362 | 430 | 4.09e-15 | 78.6 |
Msa0394050 | AT3G01080.2 | 72.857 | 70 | 18 | 1 | 270 | 339 | 203 | 271 | 2.36e-27 | 115 |
Msa0394050 | AT3G01080.2 | 58.333 | 60 | 24 | 1 | 272 | 330 | 344 | 403 | 2.63e-14 | 75.5 |
Msa0394050 | AT3G01080.1 | 72.857 | 70 | 18 | 1 | 270 | 339 | 165 | 233 | 2.36e-27 | 114 |
Msa0394050 | AT3G01080.1 | 58.333 | 60 | 24 | 1 | 272 | 330 | 306 | 365 | 3.54e-14 | 75.1 |
Msa0394050 | AT1G13960.2 | 74.242 | 66 | 17 | 0 | 270 | 335 | 74 | 139 | 2.76e-27 | 113 |
Msa0394050 | AT1G13960.2 | 56.667 | 60 | 25 | 1 | 272 | 330 | 256 | 315 | 1.61e-13 | 72.4 |
Msa0394050 | AT2G03340.1 | 78.689 | 61 | 13 | 0 | 270 | 330 | 248 | 308 | 6.39e-27 | 114 |
Msa0394050 | AT2G03340.1 | 56.667 | 60 | 25 | 1 | 272 | 330 | 415 | 474 | 8.33e-14 | 74.3 |
Msa0394050 | AT2G37260.3 | 71.233 | 73 | 19 | 1 | 266 | 336 | 79 | 151 | 1.76e-26 | 110 |
Msa0394050 | AT2G37260.3 | 42.593 | 108 | 48 | 4 | 223 | 327 | 229 | 325 | 7.79e-14 | 73.6 |
Msa0394050 | AT2G37260.2 | 71.233 | 73 | 19 | 1 | 266 | 336 | 77 | 149 | 1.91e-26 | 110 |
Msa0394050 | AT2G37260.2 | 42.593 | 108 | 48 | 4 | 223 | 327 | 227 | 323 | 7.59e-14 | 73.6 |
Msa0394050 | AT2G37260.1 | 71.233 | 73 | 19 | 1 | 266 | 336 | 159 | 231 | 2.90e-26 | 111 |
Msa0394050 | AT2G37260.1 | 42.593 | 108 | 48 | 4 | 223 | 327 | 309 | 405 | 6.00e-14 | 74.3 |
Msa0394050 | AT5G07100.2 | 53.608 | 97 | 34 | 2 | 271 | 366 | 23 | 109 | 9.66e-25 | 102 |
Msa0394050 | AT5G07100.2 | 54.688 | 64 | 28 | 1 | 272 | 334 | 141 | 204 | 4.23e-14 | 72.0 |
Msa0394050 | AT5G07100.4 | 53.608 | 97 | 34 | 2 | 271 | 366 | 23 | 109 | 9.66e-25 | 102 |
Msa0394050 | AT5G07100.4 | 54.688 | 64 | 28 | 1 | 272 | 334 | 141 | 204 | 4.23e-14 | 72.0 |
Msa0394050 | AT5G07100.5 | 53.608 | 97 | 34 | 2 | 271 | 366 | 23 | 109 | 9.66e-25 | 102 |
Msa0394050 | AT5G07100.5 | 54.688 | 64 | 28 | 1 | 272 | 334 | 141 | 204 | 4.23e-14 | 72.0 |
Msa0394050 | AT5G07100.3 | 53.608 | 97 | 34 | 2 | 271 | 366 | 23 | 109 | 9.66e-25 | 102 |
Msa0394050 | AT5G07100.3 | 54.688 | 64 | 28 | 1 | 272 | 334 | 141 | 204 | 4.23e-14 | 72.0 |
Msa0394050 | AT5G07100.1 | 53.608 | 97 | 34 | 2 | 271 | 366 | 116 | 202 | 2.97e-24 | 103 |
Msa0394050 | AT5G07100.1 | 54.688 | 64 | 28 | 1 | 272 | 334 | 234 | 297 | 5.60e-14 | 73.2 |
Msa0394050 | AT2G30250.1 | 67.692 | 65 | 21 | 0 | 271 | 335 | 165 | 229 | 7.23e-22 | 98.2 |
Msa0394050 | AT2G30250.1 | 56.923 | 65 | 27 | 1 | 273 | 336 | 329 | 393 | 5.42e-14 | 74.3 |
Msa0394050 | AT2G04880.2 | 64.407 | 59 | 21 | 0 | 272 | 330 | 111 | 169 | 1.91e-20 | 94.7 |
Msa0394050 | AT2G04880.2 | 51.220 | 82 | 35 | 2 | 273 | 353 | 284 | 361 | 1.93e-17 | 85.5 |
Msa0394050 | AT2G04880.1 | 64.407 | 59 | 21 | 0 | 272 | 330 | 111 | 169 | 2.13e-20 | 94.7 |
Msa0394050 | AT2G04880.1 | 51.220 | 82 | 35 | 2 | 273 | 353 | 308 | 385 | 1.87e-17 | 85.5 |
Msa0394050 | AT4G12020.6 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 9.88e-20 | 94.0 |
Msa0394050 | AT4G12020.8 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 9.88e-20 | 94.0 |
Msa0394050 | AT4G12020.10 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.03e-19 | 94.0 |
Msa0394050 | AT4G12020.3 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.03e-19 | 94.0 |
Msa0394050 | AT4G12020.2 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.07e-19 | 94.0 |
Msa0394050 | AT4G12020.1 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.08e-19 | 94.0 |
Msa0394050 | AT4G12020.9 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.08e-19 | 94.0 |
Msa0394050 | AT4G12020.7 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.12e-19 | 94.0 |
Msa0394050 | AT4G12020.5 | 61.538 | 65 | 24 | 1 | 273 | 337 | 402 | 465 | 1.17e-19 | 93.6 |
Msa0394050 | AT4G12020.4 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.17e-19 | 93.6 |
Msa0394050 | AT4G12020.11 | 61.538 | 65 | 24 | 1 | 273 | 337 | 469 | 532 | 1.53e-19 | 93.2 |
Msa0394050 | AT2G46130.1 | 63.793 | 58 | 20 | 1 | 272 | 328 | 30 | 87 | 1.45e-18 | 81.6 |
Msa0394050 | AT4G30935.1 | 56.061 | 66 | 28 | 1 | 273 | 337 | 332 | 397 | 2.85e-17 | 84.7 |
Msa0394050 | AT4G30935.1 | 53.623 | 69 | 30 | 2 | 263 | 330 | 159 | 226 | 5.30e-15 | 77.8 |
Msa0394050 | AT1G29860.1 | 60.938 | 64 | 24 | 1 | 272 | 334 | 136 | 199 | 5.16e-17 | 82.0 |
Msa0394050 | AT5G46350.1 | 57.143 | 70 | 28 | 2 | 272 | 340 | 183 | 251 | 6.56e-17 | 82.4 |
Msa0394050 | AT4G18170.1 | 63.333 | 60 | 21 | 1 | 272 | 330 | 172 | 231 | 1.00e-16 | 81.6 |
Msa0394050 | AT2G44745.1 | 61.404 | 57 | 21 | 1 | 272 | 327 | 145 | 201 | 1.47e-16 | 79.3 |
Msa0394050 | AT2G40740.1 | 34.177 | 158 | 94 | 5 | 191 | 343 | 97 | 249 | 2.40e-16 | 80.1 |
Msa0394050 | AT2G40740.3 | 34.177 | 158 | 94 | 5 | 191 | 343 | 106 | 258 | 3.37e-16 | 79.7 |
Msa0394050 | AT5G49520.1 | 60.000 | 60 | 23 | 1 | 272 | 330 | 221 | 280 | 1.04e-15 | 79.7 |
Msa0394050 | AT2G47260.1 | 57.812 | 64 | 26 | 1 | 272 | 334 | 174 | 237 | 1.08e-15 | 79.0 |
Msa0394050 | AT1G69310.4 | 61.404 | 57 | 21 | 1 | 272 | 327 | 147 | 203 | 1.25e-15 | 77.8 |
Msa0394050 | AT1G69310.2 | 61.404 | 57 | 21 | 1 | 272 | 327 | 147 | 203 | 1.25e-15 | 77.8 |
Msa0394050 | AT1G69310.1 | 61.404 | 57 | 21 | 1 | 272 | 327 | 147 | 203 | 1.25e-15 | 77.8 |
Msa0394050 | AT1G64000.1 | 53.448 | 58 | 26 | 1 | 272 | 328 | 114 | 171 | 1.27e-15 | 75.9 |
Msa0394050 | AT1G55600.1 | 58.333 | 60 | 24 | 1 | 273 | 331 | 308 | 367 | 2.33e-15 | 79.0 |
Msa0394050 | AT4G04450.2 | 44.565 | 92 | 49 | 2 | 242 | 331 | 168 | 259 | 2.46e-15 | 78.6 |
Msa0394050 | AT5G41570.1 | 38.298 | 94 | 57 | 1 | 236 | 328 | 62 | 155 | 3.28e-15 | 74.3 |
Msa0394050 | AT4G04450.1 | 43.617 | 94 | 51 | 2 | 242 | 333 | 262 | 355 | 4.77e-15 | 78.2 |
Msa0394050 | AT3G62340.1 | 56.667 | 60 | 25 | 1 | 272 | 330 | 118 | 177 | 1.33e-14 | 74.7 |
Msa0394050 | AT5G13080.1 | 51.724 | 58 | 27 | 1 | 272 | 328 | 67 | 124 | 1.39e-14 | 71.6 |
Msa0394050 | AT1G29280.1 | 51.562 | 64 | 29 | 2 | 269 | 330 | 71 | 134 | 1.86e-14 | 73.9 |
Msa0394050 | AT5G26170.1 | 52.632 | 57 | 26 | 1 | 272 | 327 | 113 | 169 | 2.16e-14 | 71.6 |
Msa0394050 | AT1G62300.1 | 54.098 | 61 | 26 | 2 | 273 | 331 | 313 | 373 | 2.58e-14 | 75.9 |
Msa0394050 | AT4G22070.4 | 54.098 | 61 | 26 | 2 | 273 | 331 | 298 | 358 | 2.85e-14 | 75.9 |
Msa0394050 | AT4G22070.3 | 54.098 | 61 | 26 | 2 | 273 | 331 | 298 | 358 | 2.85e-14 | 75.9 |
Msa0394050 | AT4G22070.2 | 54.098 | 61 | 26 | 2 | 273 | 331 | 298 | 358 | 2.85e-14 | 75.9 |
Msa0394050 | AT4G22070.1 | 54.098 | 61 | 26 | 2 | 273 | 331 | 298 | 358 | 2.85e-14 | 75.9 |
Msa0394050 | AT2G46130.2 | 58.621 | 58 | 19 | 2 | 272 | 328 | 30 | 83 | 4.48e-14 | 68.9 |
Msa0394050 | AT4G01720.1 | 43.299 | 97 | 51 | 3 | 239 | 331 | 204 | 300 | 7.35e-14 | 74.3 |
Msa0394050 | AT3G01970.1 | 53.125 | 64 | 27 | 2 | 272 | 333 | 65 | 127 | 7.69e-14 | 69.3 |
Msa0394050 | AT2G30590.1 | 40.659 | 91 | 51 | 3 | 243 | 331 | 285 | 374 | 1.26e-13 | 73.2 |
Msa0394050 | AT5G52830.1 | 50.685 | 73 | 33 | 3 | 271 | 341 | 164 | 235 | 2.39e-13 | 72.0 |
Msa0394050 | AT2G21900.1 | 50.000 | 60 | 29 | 1 | 272 | 330 | 109 | 168 | 3.40e-13 | 68.9 |
Msa0394050 | AT3G58710.2 | 52.381 | 63 | 28 | 2 | 270 | 330 | 68 | 130 | 7.61e-13 | 69.3 |
Msa0394050 | AT3G58710.1 | 52.381 | 63 | 28 | 2 | 270 | 330 | 69 | 131 | 7.71e-13 | 69.3 |
Msa0394050 | AT1G68150.1 | 31.746 | 189 | 106 | 6 | 144 | 330 | 128 | 295 | 8.95e-13 | 70.5 |
Msa0394050 | AT5G43290.1 | 58.621 | 58 | 23 | 1 | 271 | 327 | 113 | 170 | 9.96e-13 | 68.9 |
Msa0394050 | AT4G39410.1 | 52.632 | 57 | 26 | 1 | 272 | 327 | 223 | 279 | 1.50e-12 | 68.9 |
Msa0394050 | AT1G80840.1 | 50.820 | 61 | 28 | 2 | 272 | 330 | 146 | 206 | 2.10e-12 | 68.6 |
Msa0394050 | AT4G23810.1 | 45.902 | 61 | 29 | 2 | 270 | 326 | 156 | 216 | 2.91e-12 | 68.2 |
Msa0394050 | AT5G45050.4 | 50.769 | 65 | 30 | 2 | 268 | 330 | 1037 | 1101 | 3.66e-12 | 69.7 |
Msa0394050 | AT4G24240.1 | 35.849 | 106 | 62 | 4 | 224 | 327 | 237 | 338 | 3.74e-12 | 68.2 |
Msa0394050 | AT5G45050.1 | 50.769 | 65 | 30 | 2 | 268 | 330 | 1176 | 1240 | 3.76e-12 | 69.7 |
Msa0394050 | AT1G69810.1 | 43.056 | 72 | 38 | 2 | 273 | 341 | 204 | 275 | 3.90e-12 | 68.6 |
Msa0394050 | AT1G18860.1 | 53.333 | 60 | 26 | 2 | 273 | 330 | 240 | 299 | 3.95e-12 | 68.9 |
Msa0394050 | AT5G45050.2 | 50.769 | 65 | 30 | 2 | 268 | 330 | 1148 | 1212 | 4.05e-12 | 69.7 |
Msa0394050 | AT1G69810.2 | 43.056 | 72 | 38 | 2 | 273 | 341 | 146 | 217 | 4.78e-12 | 67.8 |
Msa0394050 | AT4G31800.2 | 47.541 | 61 | 30 | 2 | 272 | 330 | 111 | 171 | 5.89e-12 | 66.2 |
Msa0394050 | AT2G34830.1 | 51.667 | 60 | 27 | 2 | 273 | 330 | 216 | 275 | 6.14e-12 | 68.2 |
Msa0394050 | AT2G34830.2 | 51.667 | 60 | 27 | 2 | 273 | 330 | 225 | 284 | 6.86e-12 | 68.2 |
Msa0394050 | AT4G31800.1 | 46.875 | 64 | 32 | 2 | 272 | 333 | 176 | 239 | 7.66e-12 | 67.0 |
Msa0394050 | AT4G31550.1 | 39.535 | 86 | 49 | 3 | 244 | 327 | 219 | 303 | 9.33e-12 | 66.6 |
Msa0394050 | AT5G24110.1 | 39.175 | 97 | 48 | 5 | 264 | 355 | 106 | 196 | 9.91e-12 | 66.6 |
Msa0394050 | AT2G24570.1 | 39.535 | 86 | 49 | 3 | 244 | 327 | 216 | 300 | 9.99e-12 | 66.6 |
Msa0394050 | AT2G23320.1 | 52.632 | 57 | 25 | 2 | 273 | 327 | 241 | 297 | 1.09e-11 | 66.6 |
Msa0394050 | AT4G01250.1 | 47.887 | 71 | 34 | 3 | 273 | 341 | 129 | 198 | 1.16e-11 | 66.2 |
Msa0394050 | AT2G25000.2 | 48.438 | 64 | 31 | 2 | 272 | 333 | 103 | 166 | 2.03e-11 | 64.3 |
Msa0394050 | AT2G25000.4 | 48.438 | 64 | 31 | 2 | 272 | 333 | 103 | 166 | 2.03e-11 | 64.3 |
Msa0394050 | AT1G30650.1 | 50.000 | 60 | 28 | 2 | 273 | 330 | 218 | 277 | 2.07e-11 | 66.6 |
Msa0394050 | AT4G23550.1 | 49.296 | 71 | 33 | 3 | 273 | 341 | 141 | 210 | 2.75e-11 | 65.1 |
Msa0394050 | AT4G31550.2 | 43.421 | 76 | 40 | 3 | 254 | 327 | 228 | 302 | 3.10e-11 | 65.1 |
Msa0394050 | AT5G28650.1 | 50.847 | 59 | 27 | 2 | 273 | 329 | 263 | 321 | 3.81e-11 | 65.1 |
Msa0394050 | AT2G25000.3 | 48.438 | 64 | 31 | 2 | 272 | 333 | 125 | 188 | 3.81e-11 | 63.9 |
Msa0394050 | AT5G45260.1 | 35.417 | 96 | 55 | 3 | 242 | 330 | 1175 | 1270 | 3.82e-11 | 66.6 |
Msa0394050 | AT1G69310.3 | 56.140 | 57 | 20 | 2 | 272 | 327 | 147 | 199 | 4.08e-11 | 64.3 |
Msa0394050 | AT2G25000.1 | 48.438 | 64 | 31 | 2 | 272 | 333 | 146 | 209 | 4.79e-11 | 63.9 |
Msa0394050 | AT3G04670.1 | 50.847 | 59 | 27 | 2 | 273 | 329 | 263 | 321 | 5.67e-11 | 64.3 |
Msa0394050 | AT5G64810.1 | 49.123 | 57 | 28 | 1 | 272 | 327 | 110 | 166 | 7.08e-11 | 62.0 |
Msa0394050 | AT4G11070.2 | 43.056 | 72 | 35 | 3 | 270 | 335 | 107 | 178 | 7.61e-11 | 63.5 |
Msa0394050 | AT4G11070.1 | 43.056 | 72 | 35 | 3 | 270 | 335 | 139 | 210 | 9.20e-11 | 63.5 |
Find 135 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCACCGGAGCTTCACTTTC+TGG | 0.164899 | 3_2:+8575436 | None:intergenic |
GGCGACTTGGAGGAGGTTTC+GGG | 0.221606 | 3_2:+8576018 | None:intergenic |
GGTATCACTTGTTCACTTTC+CGG | 0.221643 | 3_2:+8575394 | None:intergenic |
TTCAAGCCTACAACAGATTC+AGG | 0.225658 | 3_2:-8577163 | Msa0394050:CDS |
CGGCGACTTGGAGGAGGTTT+CGG | 0.234020 | 3_2:+8576017 | None:intergenic |
GCAGTGGCGGTGACCTAGGC+TGG | 0.244486 | 3_2:-8575920 | Msa0394050:CDS |
TATAGATTATCTCCGTTATA+TGG | 0.256932 | 3_2:+8576057 | None:intergenic |
ATATAGCTGGAGCTGGTAAT+TGG | 0.284730 | 3_2:-8575878 | Msa0394050:CDS |
CTTTCTCAGCAATCCCTTCA+TGG | 0.309397 | 3_2:-8576413 | Msa0394050:intron |
CACTACCCTTAACTTGCTTT+TGG | 0.312076 | 3_2:+8576156 | None:intergenic |
CAAACAACTTCCTTTCTAAC+TGG | 0.315294 | 3_2:+8575341 | None:intergenic |
GGATATAATTGGAGAAAATA+TGG | 0.316349 | 3_2:-8576179 | Msa0394050:CDS |
AAAAGACAATTCTACACATT+TGG | 0.325774 | 3_2:-8576285 | Msa0394050:CDS |
AGGGAAAGTTCCTGAGAAAT+TGG | 0.330188 | 3_2:-8575593 | Msa0394050:CDS |
TATAACGGAGATAATCTATA+AGG | 0.331910 | 3_2:-8576054 | Msa0394050:CDS |
CATCGGAGGATGGATATAAT+TGG | 0.333091 | 3_2:-8576190 | Msa0394050:CDS |
GATGAAAATCTTGCACTAAA+TGG | 0.339970 | 3_2:-8578272 | Msa0394050:CDS |
CCCTGTGGTTCACCATGTTC+AGG | 0.344262 | 3_2:+8575945 | None:intergenic |
AATGGAAACTTTCCTGTTGT+TGG | 0.346418 | 3_2:+8577286 | None:intergenic |
TCGAGAACTCGACTTGTTCT+CGG | 0.350344 | 3_2:+8578085 | None:intergenic |
TGAAGCTCCGGTGAGGTTTA+CGG | 0.351981 | 3_2:-8575428 | Msa0394050:CDS |
TCTTGCACTAAATGGTGATT+GGG | 0.360621 | 3_2:-8578264 | Msa0394050:CDS |
CTTTCTTCCACCAATTTCTC+AGG | 0.370736 | 3_2:+8575583 | None:intergenic |
CGTGTTCCTTGCAAATTCAT+TGG | 0.378555 | 3_2:-8577901 | Msa0394050:intron |
AACTTTCCTGTTGTTGGAGA+TGG | 0.388150 | 3_2:+8577292 | None:intergenic |
ATCTTGCACTAAATGGTGAT+TGG | 0.405599 | 3_2:-8578265 | Msa0394050:CDS |
GATAGAATTGCTGCTCGAAC+TGG | 0.408486 | 3_2:-8578050 | Msa0394050:CDS |
AAGTTTCCATTTGTTTCAAA+TGG | 0.409529 | 3_2:-8577274 | Msa0394050:CDS |
CAGTTAGAAAGGAAGTTGTT+TGG | 0.412616 | 3_2:-8575340 | Msa0394050:CDS |
ATGCCTGACCGGCGACTTGG+AGG | 0.413497 | 3_2:+8576008 | None:intergenic |
CCAAGTCGCCGGTCAGGCAT+AGG | 0.416054 | 3_2:-8576005 | Msa0394050:CDS |
CAAAAGTAGCCTCCATCTTA+AGG | 0.416713 | 3_2:-8576333 | Msa0394050:CDS |
ATAACGGAGATAATCTATAA+GGG | 0.422795 | 3_2:-8576053 | Msa0394050:CDS |
ACGTCCGAATTCAGAACATT+CGG | 0.423285 | 3_2:-8578174 | Msa0394050:CDS |
CCTCCTCCAAGTCGCCGGTC+AGG | 0.425165 | 3_2:-8576011 | Msa0394050:CDS |
ATATGGCCAAAAGCAAGTTA+AGG | 0.425865 | 3_2:-8576162 | Msa0394050:CDS |
GACTCGTTGGTTGCTGGTGT+TGG | 0.426208 | 3_2:-8576221 | Msa0394050:CDS |
AACGGAGACTCGTTGGTTGC+TGG | 0.427288 | 3_2:-8576227 | Msa0394050:CDS |
GAGGGACAAGATGGTGATTC+CGG | 0.435458 | 3_2:-8578137 | Msa0394050:CDS |
CTTCCCGAATGTTCTGAATT+CGG | 0.445390 | 3_2:+8578170 | None:intergenic |
TGACAGCTGATGTTGCTTCA+AGG | 0.445597 | 3_2:+8575844 | None:intergenic |
GAGGGCCCTGAATCTGTTGT+AGG | 0.453857 | 3_2:+8577157 | None:intergenic |
TGTTATTGTTGATGATGTTA+AGG | 0.453940 | 3_2:-8575260 | Msa0394050:CDS |
CCTATGCCTGACCGGCGACT+TGG | 0.458013 | 3_2:+8576005 | None:intergenic |
GGAGAATCTAAAAGTGTAGT+AGG | 0.463976 | 3_2:+8577924 | None:intergenic |
GTGTACTCATTCAAATTGTC+CGG | 0.469086 | 3_2:-8576111 | Msa0394050:CDS |
TATGGCCAAAAGCAAGTTAA+GGG | 0.471248 | 3_2:-8576161 | Msa0394050:CDS |
ATGTTGCCATTTGAAACAAA+TGG | 0.473438 | 3_2:+8577268 | None:intergenic |
CGGAAAACTCTGCCTTAAGA+TGG | 0.485915 | 3_2:+8576321 | None:intergenic |
TGAAGGTGGAAAGGCTAAGA+TGG | 0.486902 | 3_2:-8575462 | Msa0394050:CDS |
CGTCCGAATTCAGAACATTC+GGG | 0.488948 | 3_2:-8578173 | Msa0394050:CDS |
GATAACTTGTATCGCTCAAG+TGG | 0.489377 | 3_2:+8578111 | None:intergenic |
GGTGGCAGTGGCGGTGACCT+AGG | 0.491981 | 3_2:-8575924 | Msa0394050:CDS |
ATGAAAGTGACCAGTTAGAA+AGG | 0.492508 | 3_2:-8575351 | Msa0394050:CDS |
GCACAGCCATCTCCAACAAC+AGG | 0.493338 | 3_2:-8577298 | Msa0394050:CDS |
GTACAGAAGGGAAATATAGC+TGG | 0.494656 | 3_2:-8575891 | Msa0394050:CDS |
TAAAGTGAGGTTTGAATGGA+TGG | 0.499630 | 3_2:-8578299 | None:intergenic |
TAACAACGTTGCTGAATCAA+AGG | 0.504003 | 3_2:-8575284 | Msa0394050:CDS |
TCCTGAACATGGTGAACCAC+AGG | 0.504125 | 3_2:-8575946 | Msa0394050:CDS |
AATTCAGAACATTCGGGAAG+TGG | 0.514532 | 3_2:-8578167 | Msa0394050:CDS |
CAAGTCGCCGGTCAGGCATA+GGG | 0.514587 | 3_2:-8576004 | Msa0394050:CDS |
GGTGAACCACAGGGTGGCAG+TGG | 0.518041 | 3_2:-8575936 | Msa0394050:CDS |
CAGTGGCGGTGACCTAGGCT+GGG | 0.521688 | 3_2:-8575919 | Msa0394050:CDS |
CCTGACCGGCGACTTGGAGG+AGG | 0.523850 | 3_2:+8576011 | None:intergenic |
TTCTCATGAGGGCCATATAA+CGG | 0.530629 | 3_2:-8576069 | Msa0394050:CDS |
GAACTCGACTTGTTCTCGGT+TGG | 0.530653 | 3_2:+8578089 | None:intergenic |
TCAGCTGTCAACCCCGGATA+CGG | 0.534204 | 3_2:-8575831 | Msa0394050:intron |
CAAAGAGGGTATTGAAGTGA+AGG | 0.534590 | 3_2:-8575479 | Msa0394050:CDS |
TGGTGTTGGCGGTACTCCAT+CGG | 0.535867 | 3_2:-8576207 | Msa0394050:CDS |
GGAAGAGCAAGCAGATGAAG+AGG | 0.543715 | 3_2:-8576264 | Msa0394050:CDS |
GTTGCCAGAAAGTGAAGCTC+CGG | 0.547983 | 3_2:-8575440 | Msa0394050:CDS |
AGGCTGGGCTAATGTACAGA+AGG | 0.548184 | 3_2:-8575904 | Msa0394050:CDS |
CTGAAGCTTCAACACCATGA+AGG | 0.548464 | 3_2:+8576399 | None:intergenic |
ATGCTCTCTGTATTCAACCT+TGG | 0.549716 | 3_2:+8578017 | None:intergenic |
CCAGGCGGTATAGTCAAGTA+AGG | 0.550484 | 3_2:+8577954 | None:intergenic |
TCCACTTGCATGTCAGCATG+AGG | 0.551146 | 3_2:+8575972 | None:intergenic |
TGTATCGCTCAAGTGGGTAC+CGG | 0.551680 | 3_2:+8578118 | None:intergenic |
TCAAGCCTACAACAGATTCA+GGG | 0.552504 | 3_2:-8577162 | Msa0394050:CDS |
GAACCACAGGGTGGCAGTGG+CGG | 0.552598 | 3_2:-8575933 | Msa0394050:CDS |
TAGTTGACCCTATGCCTGAC+CGG | 0.554027 | 3_2:+8575997 | None:intergenic |
AGAGGGTATTGAAGTGAAGG+TGG | 0.558580 | 3_2:-8575476 | Msa0394050:CDS |
TCGTTGGTTGCTGGTGTTGG+CGG | 0.559827 | 3_2:-8576218 | Msa0394050:CDS |
AGGGACCTTGGACTTGGACT+AGG | 0.564318 | 3_2:+8578236 | None:intergenic |
CCCTCATGCTGACATGCAAG+TGG | 0.564823 | 3_2:-8575973 | Msa0394050:CDS |
GTACACTTGTAGTAACTTCG+AGG | 0.567336 | 3_2:+8576128 | None:intergenic |
GAGGGAGAACAAAGAGTCAA+CGG | 0.570062 | 3_2:-8576245 | Msa0394050:CDS |
TCTGTACATTAGCCCAGCCT+AGG | 0.570398 | 3_2:+8575907 | None:intergenic |
AAGGGAAATATAGCTGGAGC+TGG | 0.574752 | 3_2:-8575885 | Msa0394050:CDS |
CAATGAATTTGCAAGGAACA+CGG | 0.575971 | 3_2:+8577902 | None:intergenic |
CGAAACCTCCTCCAAGTCGC+CGG | 0.578429 | 3_2:-8576016 | Msa0394050:CDS |
GGTAGAACTGAGGGACAAGA+TGG | 0.580548 | 3_2:-8578146 | Msa0394050:CDS |
ATCACCACCGTAAACCTCAC+CGG | 0.583562 | 3_2:+8575421 | None:intergenic |
TGAAGCTTCAACACCATGAA+GGG | 0.585732 | 3_2:+8576400 | None:intergenic |
GTATTGAAGTGAAGGTGGAA+AGG | 0.585971 | 3_2:-8575471 | Msa0394050:CDS |
CAATTATATCCATCCTCCGA+TGG | 0.586613 | 3_2:+8576191 | None:intergenic |
GAAAGTAGAACGTTCTCATG+AGG | 0.589600 | 3_2:-8576081 | Msa0394050:CDS |
AACTCACCAATGAATTTGCA+AGG | 0.592002 | 3_2:+8577895 | None:intergenic |
GGCGGTACTCCATCGGAGGA+TGG | 0.594165 | 3_2:-8576200 | Msa0394050:CDS |
TCAAGAGTGACAAGAGAGCA+AGG | 0.594405 | 3_2:-8575559 | Msa0394050:CDS |
GAGAACAAGTCGAGTTCTCG+AGG | 0.596736 | 3_2:-8578083 | Msa0394050:CDS |
GACTTGGAGGAGGTTTCGGG+TGG | 0.599626 | 3_2:+8576021 | None:intergenic |
GAACTGGATTTAATGCTCCA+AGG | 0.600329 | 3_2:-8578034 | Msa0394050:CDS |
GAAAGTTCCTGAGAAATTGG+TGG | 0.600923 | 3_2:-8575590 | Msa0394050:CDS |
AATGAATTTGCAAGGAACAC+GGG | 0.604026 | 3_2:+8577903 | None:intergenic |
AAAGTAGAACGTTCTCATGA+GGG | 0.604575 | 3_2:-8576080 | Msa0394050:CDS |
TCGGGAAGTGGTAGAACTGA+GGG | 0.606371 | 3_2:-8578155 | Msa0394050:CDS |
CCACTTGCATGTCAGCATGA+GGG | 0.606802 | 3_2:+8575973 | None:intergenic |
GCAACATCAGCTGTCAACCC+CGG | 0.607436 | 3_2:-8575837 | Msa0394050:CDS |
TACACTTGTAGTAACTTCGA+GGG | 0.609634 | 3_2:+8576129 | None:intergenic |
GTCTACCTAGTCCAAGTCCA+AGG | 0.614182 | 3_2:-8578241 | Msa0394050:CDS |
TAACGGAGATAATCTATAAG+GGG | 0.614320 | 3_2:-8576052 | Msa0394050:CDS |
CCTTACTTGACTATACCGCC+TGG | 0.615366 | 3_2:-8577954 | Msa0394050:CDS |
AAGAGTCAACGGAGACTCGT+TGG | 0.615925 | 3_2:-8576234 | Msa0394050:CDS |
GAAGAGCAAGCAGATGAAGA+GGG | 0.623139 | 3_2:-8576263 | Msa0394050:CDS |
GTTTACGGTGGTGATATCAC+CGG | 0.626418 | 3_2:-8575413 | Msa0394050:CDS |
AAAACTCTGCCTTAAGATGG+AGG | 0.626789 | 3_2:+8576324 | None:intergenic |
CTTGCACTAAATGGTGATTG+GGG | 0.627891 | 3_2:-8578263 | Msa0394050:CDS |
TGTTGTAGGCTTGAAAGCGA+AGG | 0.648946 | 3_2:+8577171 | None:intergenic |
TCAATCTCAAAGAGTTGATG+CGG | 0.655003 | 3_2:-8576375 | Msa0394050:CDS |
CCTGAACATGGTGAACCACA+GGG | 0.659823 | 3_2:-8575945 | Msa0394050:CDS |
AAAGTGAGGTTTGAATGGAT+GGG | 0.664900 | 3_2:-8578298 | None:intergenic |
CAAGTGGACAATCCTGAACA+TGG | 0.665803 | 3_2:-8575957 | Msa0394050:CDS |
AACGGAGATAATCTATAAGG+GGG | 0.668962 | 3_2:-8576051 | Msa0394050:CDS |
TGTTGGCGGTACTCCATCGG+AGG | 0.670376 | 3_2:-8576204 | Msa0394050:CDS |
CAGAAAGTGAAGCTCCGGTG+AGG | 0.673118 | 3_2:-8575435 | Msa0394050:CDS |
TTCGGGAAGTGGTAGAACTG+AGG | 0.674120 | 3_2:-8578156 | Msa0394050:CDS |
TCACCGCCACTGCCACCCTG+TGG | 0.678158 | 3_2:+8575930 | None:intergenic |
GGCTGGGCTAATGTACAGAA+GGG | 0.678675 | 3_2:-8575903 | Msa0394050:CDS |
ATAACTTGTATCGCTCAAGT+GGG | 0.689016 | 3_2:+8578112 | None:intergenic |
CTGATGATAATTCTGAGCTG+CGG | 0.709325 | 3_2:+8577245 | None:intergenic |
AGCTCCGGTGAGGTTTACGG+TGG | 0.715141 | 3_2:-8575425 | Msa0394050:CDS |
AACAAGTCGAGTTCTCGAGG+TGG | 0.724082 | 3_2:-8578080 | Msa0394050:CDS |
AGTGTAGTAGGACTAAGACC+AGG | 0.734205 | 3_2:+8577936 | None:intergenic |
GAACATGGTGAACCACAGGG+TGG | 0.772249 | 3_2:-8575942 | Msa0394050:CDS |
GTAGTAGGACTAAGACCAGG+CGG | 0.775032 | 3_2:+8577939 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAGAAATAAAATTTTCAAAA+GGG | - | chr3_2:8577903-8577922 | Msa0394050:CDS | 10.0% |
!! | CAAGAAAAATATAAACATAA+TGG | - | chr3_2:8576298-8576317 | Msa0394050:CDS | 15.0% |
!!! | AGATTTATATATTTTTCTTC+TGG | - | chr3_2:8577038-8577057 | Msa0394050:intron | 15.0% |
!!! | CAAGAAATAAAATTTTCAAA+AGG | - | chr3_2:8577902-8577921 | Msa0394050:CDS | 15.0% |
!!! | TAATGTTTTTATTGCAATCT+TGG | - | chr3_2:8575811-8575830 | Msa0394050:intron | 20.0% |
!! | TTAGAATGAATGATAGTTTA+AGG | + | chr3_2:8576487-8576506 | None:intergenic | 20.0% |
!!! | CTCTAAAGTATATGAAAAAT+TGG | - | chr3_2:8576573-8576592 | Msa0394050:intron | 20.0% |
!!! | TGTAGTTTTTGTTAAAATCA+CGG | + | chr3_2:8576947-8576966 | None:intergenic | 20.0% |
!!! | TTTTAACAAAAACTACACTT+TGG | - | chr3_2:8576950-8576969 | Msa0394050:intron | 20.0% |
!! | ATATAAATCTAGTGCATATT+TGG | + | chr3_2:8577028-8577047 | None:intergenic | 20.0% |
!!! | CAAAAAATCATAGTTTTGTA+GGG | + | chr3_2:8577832-8577851 | None:intergenic | 20.0% |
!!! | ACAAAAAATCATAGTTTTGT+AGG | + | chr3_2:8577833-8577852 | None:intergenic | 20.0% |
! | GTCATAATCTTAGATATTGT+CGG | - | chr3_2:8575850-8575869 | Msa0394050:CDS | 25.0% |
! | TCATAATCTTAGATATTGTC+GGG | - | chr3_2:8575851-8575870 | Msa0394050:CDS | 25.0% |
!!! | TTTTTTTAAAACCCTATGCA+TGG | - | chr3_2:8575987-8576006 | Msa0394050:CDS | 25.0% |
! | TGTAATCTTAATGTTGCAAT+TGG | - | chr3_2:8576030-8576049 | Msa0394050:CDS | 25.0% |
! | TCAATTCTTCAATTTGAACA+AGG | - | chr3_2:8576064-8576083 | Msa0394050:CDS | 25.0% |
! | CAATTCTTCAATTTGAACAA+GGG | - | chr3_2:8576065-8576084 | Msa0394050:CDS | 25.0% |
! | TTATGAATCTGTCTAATTTC+AGG | - | chr3_2:8576195-8576214 | Msa0394050:CDS | 25.0% |
! | AAGTTTCCATTTGTTTCAAA+TGG | - | chr3_2:8576241-8576260 | Msa0394050:CDS | 25.0% |
!! | TTCTTTTACGATTGTAGTTT+TGG | - | chr3_2:8576430-8576449 | Msa0394050:intron | 25.0% |
! | TAGTTTAAGGACTAAATTGA+TGG | + | chr3_2:8576474-8576493 | None:intergenic | 25.0% |
!! | TACTTTAGAGACTAAATTGA+CGG | + | chr3_2:8576563-8576582 | None:intergenic | 25.0% |
! | ATGTAGTGACTAAATTAAAG+AGG | - | chr3_2:8576675-8576694 | Msa0394050:intron | 25.0% |
! | TGTAGTGACTAAATTAAAGA+GGG | - | chr3_2:8576676-8576695 | Msa0394050:intron | 25.0% |
! | ATTTACTTCTCAAATCAACA+TGG | - | chr3_2:8576742-8576761 | Msa0394050:intron | 25.0% |
! | ATGTAAACTTGAATTGTGTA+CGG | + | chr3_2:8576811-8576830 | None:intergenic | 25.0% |
! | TTGGAACTTCAATTAAAACA+CGG | - | chr3_2:8576969-8576988 | Msa0394050:intron | 25.0% |
! | AAAAGACAATTCTACACATT+TGG | - | chr3_2:8577230-8577249 | Msa0394050:CDS | 25.0% |
! | GGATATAATTGGAGAAAATA+TGG | - | chr3_2:8577336-8577355 | Msa0394050:intron | 25.0% |
! | TATAGATTATCTCCGTTATA+TGG | + | chr3_2:8577461-8577480 | None:intergenic | 25.0% |
!! | TATAACGGAGATAATCTATA+AGG | - | chr3_2:8577461-8577480 | Msa0394050:intron | 25.0% |
!! | ATAACGGAGATAATCTATAA+GGG | - | chr3_2:8577462-8577481 | Msa0394050:intron | 25.0% |
!! | AAAAGAAGATTTTGCAAAGA+GGG | - | chr3_2:8578022-8578041 | Msa0394050:CDS | 25.0% |
!!! | TGTTATTGTTGATGATGTTA+AGG | - | chr3_2:8578255-8578274 | Msa0394050:CDS | 25.0% |
GATGAAAATCTTGCACTAAA+TGG | - | chr3_2:8575243-8575262 | Msa0394050:CDS | 30.0% | |
TTCTAGCAGTCTAGAAAAAA+GGG | + | chr3_2:8575301-8575320 | None:intergenic | 30.0% | |
TAATGTATTGTGCTTCATCT+AGG | + | chr3_2:8575743-8575762 | None:intergenic | 30.0% | |
! | TGATGATGCATACATTTCAT+AGG | - | chr3_2:8575767-8575786 | Msa0394050:intron | 30.0% |
! | TTTTATTGCAATCTTGGTGA+CGG | - | chr3_2:8575817-8575836 | Msa0394050:intron | 30.0% |
!!! | CATCATGGTTTTAGATGTTT+CGG | + | chr3_2:8575936-8575955 | None:intergenic | 30.0% |
TAAATATACAGCCATGCATA+GGG | + | chr3_2:8576001-8576020 | None:intergenic | 30.0% | |
TTAAATATACAGCCATGCAT+AGG | + | chr3_2:8576002-8576021 | None:intergenic | 30.0% | |
! | ATGTTGCCATTTGAAACAAA+TGG | + | chr3_2:8576250-8576269 | None:intergenic | 30.0% |
!! | TGACGGATTTCATATACTTT+AGG | + | chr3_2:8576546-8576565 | None:intergenic | 30.0% |
TTAGTCCTTCACATCTTAAT+AGG | - | chr3_2:8576601-8576620 | Msa0394050:intron | 30.0% | |
!! | AATAGGATGGACTAAATTGA+CGG | - | chr3_2:8576618-8576637 | Msa0394050:intron | 30.0% |
!!! | TGACGGGTTTTATATACTTT+AGG | - | chr3_2:8576635-8576654 | Msa0394050:intron | 30.0% |
GTAGTGACTAAATTAAAGAG+GGG | - | chr3_2:8576677-8576696 | Msa0394050:intron | 30.0% | |
TAGTGACTAAATTAAAGAGG+GGG | - | chr3_2:8576678-8576697 | Msa0394050:intron | 30.0% | |
!! | TTTAATTGATAGCCTTGTCT+AGG | - | chr3_2:8576862-8576881 | Msa0394050:intron | 30.0% |
! | AGTTTTTGTTAAAATCACGG+TGG | + | chr3_2:8576944-8576963 | None:intergenic | 30.0% |
TGTATTCATCTGCAAATTGA+AGG | + | chr3_2:8577076-8577095 | None:intergenic | 30.0% | |
! | TGTGTAGAATTGTCTTTTTG+AGG | + | chr3_2:8577228-8577247 | None:intergenic | 30.0% |
! | CGTTCTACTTTCTTTTTAAC+CGG | + | chr3_2:8577426-8577445 | None:intergenic | 30.0% |
TAACGGAGATAATCTATAAG+GGG | - | chr3_2:8577463-8577482 | Msa0394050:intron | 30.0% | |
!!! | AATCATAGTTTTGTAGGGTT+TGG | + | chr3_2:8577827-8577846 | None:intergenic | 30.0% |
TGAAATTCCTAGACAAGTTA+AGG | - | chr3_2:8577864-8577883 | Msa0394050:intron | 30.0% | |
!! | TTAGTTACCTTAACTTGTCT+AGG | + | chr3_2:8577874-8577893 | None:intergenic | 30.0% |
! | TTGCAAAATCTTCTTTTGCA+TGG | + | chr3_2:8578019-8578038 | None:intergenic | 30.0% |
! | CAAAAGAAGATTTTGCAAAG+AGG | - | chr3_2:8578021-8578040 | Msa0394050:CDS | 30.0% |
! | TTTCATCATCACCATGTTTT+TGG | + | chr3_2:8578150-8578169 | None:intergenic | 30.0% |
ATCTTGCACTAAATGGTGAT+TGG | - | chr3_2:8575250-8575269 | Msa0394050:CDS | 35.0% | |
TCTTGCACTAAATGGTGATT+GGG | - | chr3_2:8575251-8575270 | Msa0394050:CDS | 35.0% | |
CTTCTAGCAGTCTAGAAAAA+AGG | + | chr3_2:8575302-8575321 | None:intergenic | 35.0% | |
! | ATAACTTGTATCGCTCAAGT+GGG | + | chr3_2:8575406-8575425 | None:intergenic | 35.0% |
! | GGAGAATCTAAAAGTGTAGT+AGG | + | chr3_2:8575594-8575613 | None:intergenic | 35.0% |
AATGAATTTGCAAGGAACAC+GGG | + | chr3_2:8575615-8575634 | None:intergenic | 35.0% | |
CAATGAATTTGCAAGGAACA+CGG | + | chr3_2:8575616-8575635 | None:intergenic | 35.0% | |
AACTCACCAATGAATTTGCA+AGG | + | chr3_2:8575623-8575642 | None:intergenic | 35.0% | |
! | TAGAAAGCACATTTGTGTTG+TGG | - | chr3_2:8575660-8575679 | Msa0394050:intron | 35.0% |
AATCGACGTGATTCAAATCA+TGG | - | chr3_2:8575907-8575926 | Msa0394050:CDS | 35.0% | |
TGTTGCAATTGGATGATCTA+TGG | - | chr3_2:8576041-8576060 | Msa0394050:CDS | 35.0% | |
AGACAGATTCATAACTCAGT+AGG | + | chr3_2:8576189-8576208 | None:intergenic | 35.0% | |
AATGGAAACTTTCCTGTTGT+TGG | + | chr3_2:8576232-8576251 | None:intergenic | 35.0% | |
TCCTTCACATCTTAATAGGA+TGG | - | chr3_2:8576605-8576624 | Msa0394050:intron | 35.0% | |
TCCATCCTATTAAGATGTGA+AGG | + | chr3_2:8576609-8576628 | None:intergenic | 35.0% | |
!! | ATAGGATGGACTAAATTGAC+GGG | - | chr3_2:8576619-8576638 | Msa0394050:intron | 35.0% |
CATATATCATTGCCTAGACA+AGG | + | chr3_2:8576877-8576896 | None:intergenic | 35.0% | |
CTTGTCTAGGCAATGATATA+TGG | - | chr3_2:8576875-8576894 | Msa0394050:intron | 35.0% | |
TGGATGCATGTTTAGATTGA+AGG | - | chr3_2:8576895-8576914 | Msa0394050:intron | 35.0% | |
! | CTAGTGCATATTTGGAATAG+CGG | + | chr3_2:8577020-8577039 | None:intergenic | 35.0% |
!! | TCAATCTCAAAGAGTTGATG+CGG | - | chr3_2:8577140-8577159 | Msa0394050:CDS | 35.0% |
!! | GTAGAATTGTCTTTTTGAGG+TGG | + | chr3_2:8577225-8577244 | None:intergenic | 35.0% |
ATATGGCCAAAAGCAAGTTA+AGG | - | chr3_2:8577353-8577372 | Msa0394050:intron | 35.0% | |
TATGGCCAAAAGCAAGTTAA+GGG | - | chr3_2:8577354-8577373 | Msa0394050:intron | 35.0% | |
TACACTTGTAGTAACTTCGA+GGG | + | chr3_2:8577389-8577408 | None:intergenic | 35.0% | |
GTGTACTCATTCAAATTGTC+CGG | - | chr3_2:8577404-8577423 | Msa0394050:intron | 35.0% | |
AAAGTAGAACGTTCTCATGA+GGG | - | chr3_2:8577435-8577454 | Msa0394050:intron | 35.0% | |
AACGGAGATAATCTATAAGG+GGG | - | chr3_2:8577464-8577483 | Msa0394050:intron | 35.0% | |
ATGAAAGTGACCAGTTAGAA+AGG | - | chr3_2:8578164-8578183 | Msa0394050:CDS | 35.0% | |
CAAACAACTTCCTTTCTAAC+TGG | + | chr3_2:8578177-8578196 | None:intergenic | 35.0% | |
CAGTTAGAAAGGAAGTTGTT+TGG | - | chr3_2:8578175-8578194 | Msa0394050:CDS | 35.0% | |
TAACAACGTTGCTGAATCAA+AGG | - | chr3_2:8578231-8578250 | Msa0394050:CDS | 35.0% | |
CTTGCACTAAATGGTGATTG+GGG | - | chr3_2:8575252-8575271 | Msa0394050:CDS | 40.0% | |
AGTCTAGAAAAAAGGGACCT+TGG | + | chr3_2:8575294-8575313 | None:intergenic | 40.0% | |
ACGTCCGAATTCAGAACATT+CGG | - | chr3_2:8575341-8575360 | Msa0394050:CDS | 40.0% | |
! | CTTCCCGAATGTTCTGAATT+CGG | + | chr3_2:8575348-8575367 | None:intergenic | 40.0% |
AATTCAGAACATTCGGGAAG+TGG | - | chr3_2:8575348-8575367 | Msa0394050:CDS | 40.0% | |
! | GATAACTTGTATCGCTCAAG+TGG | + | chr3_2:8575407-8575426 | None:intergenic | 40.0% |
GAACTGGATTTAATGCTCCA+AGG | - | chr3_2:8575481-8575500 | Msa0394050:CDS | 40.0% | |
ATGCTCTCTGTATTCAACCT+TGG | + | chr3_2:8575501-8575520 | None:intergenic | 40.0% | |
CGTGTTCCTTGCAAATTCAT+TGG | - | chr3_2:8575614-8575633 | Msa0394050:intron | 40.0% | |
CAGATTCATAACTCAGTAGG+AGG | + | chr3_2:8576186-8576205 | None:intergenic | 40.0% | |
AACTTTCCTGTTGTTGGAGA+TGG | + | chr3_2:8576226-8576245 | None:intergenic | 40.0% | |
CTGATGATAATTCTGAGCTG+CGG | + | chr3_2:8576273-8576292 | None:intergenic | 40.0% | |
TTCAAGCCTACAACAGATTC+AGG | - | chr3_2:8576352-8576371 | Msa0394050:CDS | 40.0% | |
TCAAGCCTACAACAGATTCA+GGG | - | chr3_2:8576353-8576372 | Msa0394050:CDS | 40.0% | |
CCAGCACCTTGATAAAAAGA+GGG | + | chr3_2:8576379-8576398 | None:intergenic | 40.0% | |
ACCAGCACCTTGATAAAAAG+AGG | + | chr3_2:8576380-8576399 | None:intergenic | 40.0% | |
TGAAGCTTCAACACCATGAA+GGG | + | chr3_2:8577118-8577137 | None:intergenic | 40.0% | |
CAAAAGTAGCCTCCATCTTA+AGG | - | chr3_2:8577182-8577201 | Msa0394050:CDS | 40.0% | |
AAAACTCTGCCTTAAGATGG+AGG | + | chr3_2:8577194-8577213 | None:intergenic | 40.0% | |
CAATTATATCCATCCTCCGA+TGG | + | chr3_2:8577327-8577346 | None:intergenic | 40.0% | |
CATCGGAGGATGGATATAAT+TGG | - | chr3_2:8577325-8577344 | Msa0394050:intron | 40.0% | |
!!! | CACTACCCTTAACTTGCTTT+TGG | + | chr3_2:8577362-8577381 | None:intergenic | 40.0% |
GTACACTTGTAGTAACTTCG+AGG | + | chr3_2:8577390-8577409 | None:intergenic | 40.0% | |
GAAAGTAGAACGTTCTCATG+AGG | - | chr3_2:8577434-8577453 | Msa0394050:intron | 40.0% | |
TTCTCATGAGGGCCATATAA+CGG | - | chr3_2:8577446-8577465 | Msa0394050:intron | 40.0% | |
GTACAGAAGGGAAATATAGC+TGG | - | chr3_2:8577624-8577643 | Msa0394050:intron | 40.0% | |
ATATAGCTGGAGCTGGTAAT+TGG | - | chr3_2:8577637-8577656 | Msa0394050:intron | 40.0% | |
AGGGAAAGTTCCTGAGAAAT+TGG | - | chr3_2:8577922-8577941 | Msa0394050:CDS | 40.0% | |
GAAAGTTCCTGAGAAATTGG+TGG | - | chr3_2:8577925-8577944 | Msa0394050:CDS | 40.0% | |
CTTTCTTCCACCAATTTCTC+AGG | + | chr3_2:8577935-8577954 | None:intergenic | 40.0% | |
!! | CAAAGAGGGTATTGAAGTGA+AGG | - | chr3_2:8578036-8578055 | Msa0394050:CDS | 40.0% |
GTATTGAAGTGAAGGTGGAA+AGG | - | chr3_2:8578044-8578063 | Msa0394050:CDS | 40.0% | |
GGTATCACTTGTTCACTTTC+CGG | + | chr3_2:8578124-8578143 | None:intergenic | 40.0% | |
GTGATACCTTGCCAAAAACA+TGG | - | chr3_2:8578136-8578155 | Msa0394050:CDS | 40.0% | |
!!! | TCATCACCATGTTTTTGGCA+AGG | + | chr3_2:8578145-8578164 | None:intergenic | 40.0% |
GAAAAAAGGGACCTTGGACT+TGG | + | chr3_2:8575288-8575307 | None:intergenic | 45.0% | |
CGTCCGAATTCAGAACATTC+GGG | - | chr3_2:8575342-8575361 | Msa0394050:CDS | 45.0% | |
! | TCGAGAACTCGACTTGTTCT+CGG | + | chr3_2:8575433-8575452 | None:intergenic | 45.0% |
GATAGAATTGCTGCTCGAAC+TGG | - | chr3_2:8575465-8575484 | Msa0394050:CDS | 45.0% | |
AGTGTAGTAGGACTAAGACC+AGG | + | chr3_2:8575582-8575601 | None:intergenic | 45.0% | |
CAATCTAGGTTGCGACATCA+TGG | + | chr3_2:8575951-8575970 | None:intergenic | 45.0% | |
TGATGTCGCAACCTAGATTG+TGG | - | chr3_2:8575951-8575970 | Msa0394050:CDS | 45.0% | |
AATGTCCGTGACCACAATCT+AGG | + | chr3_2:8575965-8575984 | None:intergenic | 45.0% | |
TGTTGTAGGCTTGAAAGCGA+AGG | + | chr3_2:8576347-8576366 | None:intergenic | 45.0% | |
! | TCAGGGCCCTCTTTTTATCA+AGG | - | chr3_2:8576370-8576389 | Msa0394050:CDS | 45.0% |
! | CCCTCTTTTTATCAAGGTGC+TGG | - | chr3_2:8576376-8576395 | Msa0394050:CDS | 45.0% |
AAGAGGGGGTGATAGTTTGA+TGG | - | chr3_2:8576692-8576711 | Msa0394050:intron | 45.0% | |
CTTTCTCAGCAATCCCTTCA+TGG | - | chr3_2:8577102-8577121 | Msa0394050:intron | 45.0% | |
CTGAAGCTTCAACACCATGA+AGG | + | chr3_2:8577119-8577138 | None:intergenic | 45.0% | |
CGGAAAACTCTGCCTTAAGA+TGG | + | chr3_2:8577197-8577216 | None:intergenic | 45.0% | |
GAAGAGCAAGCAGATGAAGA+GGG | - | chr3_2:8577252-8577271 | Msa0394050:CDS | 45.0% | |
GAGGGAGAACAAAGAGTCAA+CGG | - | chr3_2:8577270-8577289 | Msa0394050:CDS | 45.0% | |
CAAGTGGACAATCCTGAACA+TGG | - | chr3_2:8577558-8577577 | Msa0394050:intron | 45.0% | |
AAGGGAAATATAGCTGGAGC+TGG | - | chr3_2:8577630-8577649 | Msa0394050:intron | 45.0% | |
! | TGACAGCTGATGTTGCTTCA+AGG | + | chr3_2:8577674-8577693 | None:intergenic | 45.0% |
!! | TTGGATTGGTTACCGTATCC+GGG | + | chr3_2:8577699-8577718 | None:intergenic | 45.0% |
!! | GTTGGATTGGTTACCGTATC+CGG | + | chr3_2:8577700-8577719 | None:intergenic | 45.0% |
TCAAGAGTGACAAGAGAGCA+AGG | - | chr3_2:8577956-8577975 | Msa0394050:CDS | 45.0% | |
!! | AGAGGGTATTGAAGTGAAGG+TGG | - | chr3_2:8578039-8578058 | Msa0394050:CDS | 45.0% |
TGAAGGTGGAAAGGCTAAGA+TGG | - | chr3_2:8578053-8578072 | Msa0394050:CDS | 45.0% | |
GTTTACGGTGGTGATATCAC+CGG | - | chr3_2:8578102-8578121 | Msa0394050:CDS | 45.0% | |
!! | TATTATTTATATATAGTTTA+GGG | + | chr3_2:8576516-8576535 | None:intergenic | 5.0% |
!! | TTATTATTTATATATAGTTT+AGG | + | chr3_2:8576517-8576536 | None:intergenic | 5.0% |
GTCTACCTAGTCCAAGTCCA+AGG | - | chr3_2:8575274-8575293 | Msa0394050:CDS | 50.0% | |
TTCGGGAAGTGGTAGAACTG+AGG | - | chr3_2:8575359-8575378 | Msa0394050:CDS | 50.0% | |
TCGGGAAGTGGTAGAACTGA+GGG | - | chr3_2:8575360-8575379 | Msa0394050:CDS | 50.0% | |
GGTAGAACTGAGGGACAAGA+TGG | - | chr3_2:8575369-8575388 | Msa0394050:CDS | 50.0% | |
GAGGGACAAGATGGTGATTC+CGG | - | chr3_2:8575378-8575397 | Msa0394050:CDS | 50.0% | |
TGTATCGCTCAAGTGGGTAC+CGG | + | chr3_2:8575400-8575419 | None:intergenic | 50.0% | |
! | GAACTCGACTTGTTCTCGGT+TGG | + | chr3_2:8575429-8575448 | None:intergenic | 50.0% |
GAGAACAAGTCGAGTTCTCG+AGG | - | chr3_2:8575432-8575451 | Msa0394050:CDS | 50.0% | |
AACAAGTCGAGTTCTCGAGG+TGG | - | chr3_2:8575435-8575454 | Msa0394050:CDS | 50.0% | |
CCAGGCGGTATAGTCAAGTA+AGG | + | chr3_2:8575564-8575583 | None:intergenic | 50.0% | |
CCTTACTTGACTATACCGCC+TGG | - | chr3_2:8575561-8575580 | Msa0394050:CDS | 50.0% | |
GTAGTAGGACTAAGACCAGG+CGG | + | chr3_2:8575579-8575598 | None:intergenic | 50.0% | |
CGCAACCTAGATTGTGGTCA+CGG | - | chr3_2:8575957-8575976 | Msa0394050:CDS | 50.0% | |
!!! | GTCTTTTTGAGGTGGCGAGT+CGG | + | chr3_2:8577217-8577236 | None:intergenic | 50.0% |
GGAAGAGCAAGCAGATGAAG+AGG | - | chr3_2:8577251-8577270 | Msa0394050:CDS | 50.0% | |
AAGAGTCAACGGAGACTCGT+TGG | - | chr3_2:8577281-8577300 | Msa0394050:CDS | 50.0% | |
TAGTTGACCCTATGCCTGAC+CGG | + | chr3_2:8577521-8577540 | None:intergenic | 50.0% | |
CCACTTGCATGTCAGCATGA+GGG | + | chr3_2:8577545-8577564 | None:intergenic | 50.0% | |
TCCACTTGCATGTCAGCATG+AGG | + | chr3_2:8577546-8577565 | None:intergenic | 50.0% | |
TCCTGAACATGGTGAACCAC+AGG | - | chr3_2:8577569-8577588 | Msa0394050:intron | 50.0% | |
CCTGAACATGGTGAACCACA+GGG | - | chr3_2:8577570-8577589 | Msa0394050:intron | 50.0% | |
TCTGTACATTAGCCCAGCCT+AGG | + | chr3_2:8577611-8577630 | None:intergenic | 50.0% | |
AGGCTGGGCTAATGTACAGA+AGG | - | chr3_2:8577611-8577630 | Msa0394050:intron | 50.0% | |
GGCTGGGCTAATGTACAGAA+GGG | - | chr3_2:8577612-8577631 | Msa0394050:intron | 50.0% | |
!! | TGGATTGGTTACCGTATCCG+GGG | + | chr3_2:8577698-8577717 | None:intergenic | 50.0% |
GTTGCCAGAAAGTGAAGCTC+CGG | - | chr3_2:8578075-8578094 | Msa0394050:CDS | 50.0% | |
TGAAGCTCCGGTGAGGTTTA+CGG | - | chr3_2:8578087-8578106 | Msa0394050:CDS | 50.0% | |
ATCACCACCGTAAACCTCAC+CGG | + | chr3_2:8578097-8578116 | None:intergenic | 50.0% | |
AGGGACCTTGGACTTGGACT+AGG | + | chr3_2:8575282-8575301 | None:intergenic | 55.0% | |
!! | TGCAATCTTGGTGACGGCTG+CGG | - | chr3_2:8575823-8575842 | Msa0394050:intron | 55.0% |
GCACAGCCATCTCCAACAAC+AGG | - | chr3_2:8576217-8576236 | Msa0394050:CDS | 55.0% | |
GAGGGCCCTGAATCTGTTGT+AGG | + | chr3_2:8576361-8576380 | None:intergenic | 55.0% | |
! | AACGGAGACTCGTTGGTTGC+TGG | - | chr3_2:8577288-8577307 | Msa0394050:CDS | 55.0% |
! | GACTCGTTGGTTGCTGGTGT+TGG | - | chr3_2:8577294-8577313 | Msa0394050:CDS | 55.0% |
! | TCGTTGGTTGCTGGTGTTGG+CGG | - | chr3_2:8577297-8577316 | Msa0394050:CDS | 55.0% |
!! | TGGTGTTGGCGGTACTCCAT+CGG | - | chr3_2:8577308-8577327 | Msa0394050:intron | 55.0% |
CCCTCATGCTGACATGCAAG+TGG | - | chr3_2:8577542-8577561 | Msa0394050:intron | 55.0% | |
CCCTGTGGTTCACCATGTTC+AGG | + | chr3_2:8577573-8577592 | None:intergenic | 55.0% | |
GAACATGGTGAACCACAGGG+TGG | - | chr3_2:8577573-8577592 | Msa0394050:intron | 55.0% | |
GCAACATCAGCTGTCAACCC+CGG | - | chr3_2:8577678-8577697 | Msa0394050:intron | 55.0% | |
TCAGCTGTCAACCCCGGATA+CGG | - | chr3_2:8577684-8577703 | Msa0394050:intron | 55.0% | |
CTCACCGGAGCTTCACTTTC+TGG | + | chr3_2:8578082-8578101 | None:intergenic | 55.0% | |
CAGAAAGTGAAGCTCCGGTG+AGG | - | chr3_2:8578080-8578099 | Msa0394050:CDS | 55.0% | |
TGTTGGCGGTACTCCATCGG+AGG | - | chr3_2:8577311-8577330 | Msa0394050:intron | 60.0% | |
GACTTGGAGGAGGTTTCGGG+TGG | + | chr3_2:8577497-8577516 | None:intergenic | 60.0% | |
! | GGCGACTTGGAGGAGGTTTC+GGG | + | chr3_2:8577500-8577519 | None:intergenic | 60.0% |
! | CGGCGACTTGGAGGAGGTTT+CGG | + | chr3_2:8577501-8577520 | None:intergenic | 60.0% |
CGAAACCTCCTCCAAGTCGC+CGG | - | chr3_2:8577499-8577518 | Msa0394050:intron | 60.0% | |
CAAGTCGCCGGTCAGGCATA+GGG | - | chr3_2:8577511-8577530 | Msa0394050:intron | 60.0% | |
AGCTCCGGTGAGGTTTACGG+TGG | - | chr3_2:8578090-8578109 | Msa0394050:CDS | 60.0% | |
GGCGGTACTCCATCGGAGGA+TGG | - | chr3_2:8577315-8577334 | Msa0394050:intron | 65.0% | |
! | ATGCCTGACCGGCGACTTGG+AGG | + | chr3_2:8577510-8577529 | None:intergenic | 65.0% |
CCTATGCCTGACCGGCGACT+TGG | + | chr3_2:8577513-8577532 | None:intergenic | 65.0% | |
CCAAGTCGCCGGTCAGGCAT+AGG | - | chr3_2:8577510-8577529 | Msa0394050:intron | 65.0% | |
GGTGAACCACAGGGTGGCAG+TGG | - | chr3_2:8577579-8577598 | Msa0394050:intron | 65.0% | |
GAACCACAGGGTGGCAGTGG+CGG | - | chr3_2:8577582-8577601 | Msa0394050:intron | 65.0% | |
CAGTGGCGGTGACCTAGGCT+GGG | - | chr3_2:8577596-8577615 | Msa0394050:intron | 65.0% | |
! | CCTGACCGGCGACTTGGAGG+AGG | + | chr3_2:8577507-8577526 | None:intergenic | 70.0% |
CCTCCTCCAAGTCGCCGGTC+AGG | - | chr3_2:8577504-8577523 | Msa0394050:intron | 70.0% | |
TCACCGCCACTGCCACCCTG+TGG | + | chr3_2:8577588-8577607 | None:intergenic | 70.0% | |
GGTGGCAGTGGCGGTGACCT+AGG | - | chr3_2:8577591-8577610 | Msa0394050:intron | 70.0% | |
GCAGTGGCGGTGACCTAGGC+TGG | - | chr3_2:8577595-8577614 | Msa0394050:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 8575231 | 8578306 | 8575231 | ID=Msa0394050;Name=Msa0394050 |
chr3_2 | mRNA | 8575231 | 8578306 | 8575231 | ID=Msa0394050-mRNA-1;Parent=Msa0394050;Name=Msa0394050-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.33|0.25|0.75|1|1|4|0|523 |
chr3_2 | exon | 8577902 | 8578306 | 8577902 | ID=Msa0394050-mRNA-1:exon:2198;Parent=Msa0394050-mRNA-1 |
chr3_2 | exon | 8577132 | 8577320 | 8577132 | ID=Msa0394050-mRNA-1:exon:2197;Parent=Msa0394050-mRNA-1 |
chr3_2 | exon | 8575832 | 8576426 | 8575832 | ID=Msa0394050-mRNA-1:exon:2196;Parent=Msa0394050-mRNA-1 |
chr3_2 | exon | 8575231 | 8575613 | 8575231 | ID=Msa0394050-mRNA-1:exon:2195;Parent=Msa0394050-mRNA-1 |
chr3_2 | CDS | 8577902 | 8578306 | 8577902 | ID=Msa0394050-mRNA-1:cds;Parent=Msa0394050-mRNA-1 |
chr3_2 | CDS | 8577132 | 8577320 | 8577132 | ID=Msa0394050-mRNA-1:cds;Parent=Msa0394050-mRNA-1 |
chr3_2 | CDS | 8575832 | 8576426 | 8575832 | ID=Msa0394050-mRNA-1:cds;Parent=Msa0394050-mRNA-1 |
chr3_2 | CDS | 8575231 | 8575613 | 8575231 | ID=Msa0394050-mRNA-1:cds;Parent=Msa0394050-mRNA-1 |
Gene Sequence |
Protein sequence |