Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394610 | GAU51660.1 | 65.177 | 649 | 103 | 15 | 72 | 623 | 14 | 636 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394610 | sp|Q9SZL8|FRS5_ARATH | 26.613 | 248 | 164 | 5 | 78 | 318 | 118 | 354 | 3.70e-21 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394610 | A0A2Z6PJC0 | 65.177 | 649 | 103 | 15 | 72 | 623 | 14 | 636 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0394610 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394610 | MtrunA17_Chr3g0088371 | 76.821 | 151 | 25 | 3 | 483 | 623 | 1 | 151 | 4.42e-72 | 230 |
| Msa0394610 | MtrunA17_Chr6g0475591 | 95.775 | 71 | 1 | 1 | 177 | 245 | 1 | 71 | 4.26e-40 | 140 |
| Msa0394610 | MtrunA17_Chr1g0172971 | 57.576 | 132 | 13 | 2 | 7 | 110 | 1 | 117 | 5.26e-34 | 136 |
| Msa0394610 | MtrunA17_Chr7g0258861 | 33.484 | 221 | 127 | 5 | 68 | 281 | 43 | 250 | 9.99e-31 | 122 |
| Msa0394610 | MtrunA17_Chr2g0324011 | 30.078 | 256 | 156 | 7 | 68 | 314 | 43 | 284 | 2.58e-27 | 117 |
| Msa0394610 | MtrunA17_Chr1g0202341 | 30.242 | 248 | 148 | 7 | 80 | 318 | 98 | 329 | 9.29e-25 | 109 |
| Msa0394610 | MtrunA17_Chr1g0202341 | 29.572 | 257 | 117 | 11 | 286 | 524 | 399 | 609 | 1.59e-18 | 89.7 |
| Msa0394610 | MtrunA17_Chr5g0448761 | 27.381 | 252 | 161 | 6 | 78 | 318 | 105 | 345 | 2.73e-23 | 105 |
| Msa0394610 | MtrunA17_Chr3g0082121 | 24.688 | 320 | 181 | 7 | 282 | 585 | 380 | 655 | 3.34e-21 | 98.2 |
| Msa0394610 | MtrunA17_Chr3g0082121 | 29.365 | 252 | 142 | 9 | 78 | 318 | 88 | 314 | 5.00e-21 | 97.8 |
| Msa0394610 | MtrunA17_Chr2g0296781 | 29.167 | 216 | 144 | 5 | 115 | 322 | 61 | 275 | 4.48e-20 | 94.7 |
| Msa0394610 | MtrunA17_Chr1g0164591 | 30.542 | 203 | 119 | 6 | 122 | 318 | 8 | 194 | 7.54e-20 | 91.3 |
| Msa0394610 | MtrunA17_Chr8g0363841 | 28.195 | 266 | 156 | 12 | 79 | 331 | 64 | 307 | 1.54e-18 | 89.7 |
| Msa0394610 | MtrunA17_Chr8g0363841 | 26.357 | 258 | 140 | 9 | 282 | 527 | 361 | 580 | 2.29e-13 | 73.2 |
| Msa0394610 | MtrunA17_Chr1g0203051 | 25.000 | 248 | 165 | 5 | 79 | 318 | 124 | 358 | 2.26e-16 | 82.8 |
| Msa0394610 | MtrunA17_Chr6g0477261 | 29.677 | 155 | 105 | 2 | 169 | 319 | 7 | 161 | 4.04e-16 | 82.0 |
| Msa0394610 | MtrunA17_Chr1g0203721 | 24.887 | 221 | 140 | 5 | 73 | 281 | 99 | 305 | 7.22e-16 | 81.6 |
| Msa0394610 | MtrunA17_Chr3g0080351 | 26.979 | 341 | 190 | 14 | 278 | 606 | 407 | 700 | 1.21e-15 | 80.9 |
| Msa0394610 | MtrunA17_Chr1g0207551 | 26.071 | 280 | 162 | 11 | 284 | 557 | 378 | 618 | 2.55e-14 | 76.6 |
| Msa0394610 | MtrunA17_Chr5g0441581 | 25.581 | 215 | 145 | 5 | 111 | 318 | 93 | 299 | 8.48e-14 | 74.7 |
| Msa0394610 | MtrunA17_Chr5g0431001 | 26.697 | 221 | 149 | 5 | 122 | 337 | 150 | 362 | 3.78e-12 | 68.9 |
| Msa0394610 | MtrunA17_Chr2g0287651 | 27.907 | 215 | 126 | 8 | 79 | 281 | 120 | 317 | 5.66e-12 | 68.9 |
| Msa0394610 | MtrunA17_Chr2g0287651 | 22.685 | 216 | 144 | 4 | 309 | 524 | 440 | 632 | 3.70e-11 | 66.2 |
| Msa0394610 | MtrunA17_Chr1g0198761 | 24.186 | 215 | 150 | 5 | 112 | 314 | 119 | 332 | 8.26e-12 | 68.6 |
| Msa0394610 | MtrunA17_Chr6g0458391 | 25.498 | 251 | 143 | 9 | 78 | 318 | 270 | 486 | 2.83e-11 | 66.6 |
| Msa0394610 | MtrunA17_Chr3g0118611 | 23.009 | 339 | 187 | 12 | 286 | 611 | 293 | 570 | 5.91e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394610 | AT4G38180.1 | 26.613 | 248 | 164 | 5 | 78 | 318 | 118 | 354 | 3.76e-22 | 102 |
| Msa0394610 | AT4G15090.1 | 27.401 | 354 | 187 | 15 | 282 | 615 | 398 | 701 | 2.52e-16 | 83.6 |
| Msa0394610 | AT4G15090.5 | 27.401 | 354 | 187 | 15 | 282 | 615 | 398 | 701 | 2.52e-16 | 83.6 |
| Msa0394610 | AT4G15090.3 | 27.401 | 354 | 187 | 15 | 282 | 615 | 398 | 701 | 2.52e-16 | 83.6 |
| Msa0394610 | AT4G15090.2 | 27.401 | 354 | 187 | 15 | 282 | 615 | 398 | 701 | 2.52e-16 | 83.6 |
| Msa0394610 | AT4G15090.4 | 27.401 | 354 | 187 | 15 | 282 | 615 | 398 | 701 | 2.52e-16 | 83.6 |
| Msa0394610 | AT5G28530.1 | 24.828 | 290 | 184 | 7 | 50 | 318 | 71 | 347 | 4.39e-14 | 76.3 |
| Msa0394610 | AT5G28530.3 | 24.828 | 290 | 184 | 7 | 50 | 318 | 71 | 347 | 4.52e-14 | 75.9 |
| Msa0394610 | AT5G28530.2 | 24.828 | 290 | 184 | 7 | 50 | 318 | 71 | 347 | 4.52e-14 | 75.9 |
| Msa0394610 | AT4G19990.1 | 38.776 | 98 | 51 | 3 | 456 | 551 | 436 | 526 | 6.53e-11 | 65.9 |
| Msa0394610 | AT4G19990.3 | 38.776 | 98 | 51 | 3 | 456 | 551 | 493 | 583 | 6.82e-11 | 65.9 |
| Msa0394610 | AT4G19990.4 | 38.776 | 98 | 51 | 3 | 456 | 551 | 493 | 583 | 6.82e-11 | 65.9 |
| Msa0394610 | AT4G19990.7 | 38.776 | 98 | 51 | 3 | 456 | 551 | 507 | 597 | 7.07e-11 | 65.9 |
| Msa0394610 | AT4G19990.5 | 38.776 | 98 | 51 | 3 | 456 | 551 | 493 | 583 | 7.18e-11 | 65.9 |
| Msa0394610 | AT4G19990.6 | 38.776 | 98 | 51 | 3 | 456 | 551 | 493 | 583 | 7.42e-11 | 65.9 |
| Msa0394610 | AT4G19990.2 | 38.776 | 98 | 51 | 3 | 456 | 551 | 493 | 583 | 7.42e-11 | 65.9 |
Find 94 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 3_2:+9627024 | Msa0394610:CDS |
| TTCTTTGACTTAATTGGATT+TGG | 0.266522 | 3_2:-9627838 | None:intergenic |
| TCTGCTGTTGGCCTGTTGTT+TGG | 0.302805 | 3_2:-9620671 | None:intergenic |
| TTACTTCTCGAAATGATCTA+AGG | 0.311482 | 3_2:-9620862 | None:intergenic |
| GCCTTCGAATGTTGATGTTT+TGG | 0.322848 | 3_2:+9627273 | Msa0394610:CDS |
| CAACTAGATTATTCTCTATT+CGG | 0.323831 | 3_2:+9621178 | Msa0394610:CDS |
| TTGAAGATCTTGGAGTTCTT+AGG | 0.331625 | 3_2:+9627442 | Msa0394610:intron |
| GCATACGATTTGCGTAAGTT+TGG | 0.338878 | 3_2:-9626838 | None:intergenic |
| CGATCATGAACTTCAAAACT+TGG | 0.341734 | 3_2:-9627322 | None:intergenic |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 3_2:-9621228 | None:intergenic |
| CTCGACGGCGTTCTTGAAGC+TGG | 0.383649 | 3_2:+9627682 | Msa0394610:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 3_2:+9621235 | Msa0394610:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 3_2:+9621227 | Msa0394610:CDS |
| GAGAACGTCTTATGAAGTTA+TGG | 0.394356 | 3_2:+9620937 | Msa0394610:CDS |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 3_2:-9627820 | None:intergenic |
| CTAAGGTAACGCGAATGCTT+TGG | 0.399481 | 3_2:-9620845 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 3_2:+9627156 | Msa0394610:CDS |
| GAAGGCCTACCTCAGACTTT+AGG | 0.402909 | 3_2:+9626807 | Msa0394610:CDS |
| GAGAAGTTGCTTCTTTCTAA+AGG | 0.422174 | 3_2:+9627715 | Msa0394610:CDS |
| CGTTATGTTTGTAACAAAGA+AGG | 0.427485 | 3_2:+9620623 | Msa0394610:CDS |
| GAAGTTATGGGTCAAGGAGT+TGG | 0.428685 | 3_2:+9620950 | Msa0394610:CDS |
| GCTGTTGGTGAAACATCTGC+TGG | 0.428855 | 3_2:+9627781 | Msa0394610:CDS |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 3_2:+9620875 | Msa0394610:CDS |
| TTGATATCGTTGTGCTTGAC+TGG | 0.433430 | 3_2:-9627590 | None:intergenic |
| TCCATGATTCTTTATTGCTA+GGG | 0.444266 | 3_2:-9620460 | None:intergenic |
| TTCCATGATTCTTTATTGCT+AGG | 0.445442 | 3_2:-9620461 | None:intergenic |
| TTCTTTGAACTTTGGTGCGG+TGG | 0.447203 | 3_2:-9627812 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 3_2:+9620740 | Msa0394610:CDS |
| TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 3_2:+9626856 | Msa0394610:CDS |
| ATTTACTTAATCCAAACAAC+AGG | 0.452259 | 3_2:+9620660 | Msa0394610:CDS |
| TTCATGATCGATTTGATGAA+AGG | 0.458022 | 3_2:+9627335 | Msa0394610:CDS |
| CTTGCTTTGCATTTATTCAC+AGG | 0.460007 | 3_2:+9627122 | Msa0394610:CDS |
| GCTCTTATAAATTCTAAAGC+TGG | 0.462891 | 3_2:+9620905 | Msa0394610:CDS |
| GACCGCATCAGCTGACTGTT+GGG | 0.463150 | 3_2:-9627076 | None:intergenic |
| AGAACGTCTTATGAAGTTAT+GGG | 0.466325 | 3_2:+9620938 | Msa0394610:CDS |
| ACAAAACAAGAAATTTGATA+AGG | 0.468895 | 3_2:+9620589 | Msa0394610:CDS |
| CGCTTTAAAACATATTGTCC+AGG | 0.471916 | 3_2:-9627499 | None:intergenic |
| GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 3_2:+9626855 | Msa0394610:CDS |
| TTTAAGTCTGAAAACCGAAA+AGG | 0.483010 | 3_2:-9620989 | None:intergenic |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 3_2:-9627158 | None:intergenic |
| CTTTCTAAAGGTATTCGTAC+AGG | 0.486879 | 3_2:+9627727 | Msa0394610:CDS |
| CATTCTTTGAAGACAATACC+TGG | 0.489494 | 3_2:+9627481 | Msa0394610:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 3_2:+9627172 | Msa0394610:CDS |
| TTGAAGACTTAGATGGCGTC+GGG | 0.493598 | 3_2:-9627750 | None:intergenic |
| CTGTTGGTGAAACATCTGCT+GGG | 0.493682 | 3_2:+9627782 | Msa0394610:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 3_2:+9626996 | Msa0394610:intron |
| GAATGCTTTGGTTTATGTAA+TGG | 0.496214 | 3_2:-9620833 | None:intergenic |
| CCCCTAGCAATAAAGAATCA+TGG | 0.497001 | 3_2:+9620459 | Msa0394610:CDS |
| TGAATAAATGCAAAGCAAGA+AGG | 0.503349 | 3_2:-9627118 | None:intergenic |
| TCTTTGAACTTTGGTGCGGT+GGG | 0.503874 | 3_2:-9627811 | None:intergenic |
| TTACAACCAACCCTTTCCTC+AGG | 0.505082 | 3_2:-9620734 | None:intergenic |
| AGCTGGAATATATTTGAAGC+TGG | 0.507410 | 3_2:+9620757 | Msa0394610:CDS |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 3_2:+9627015 | Msa0394610:CDS |
| GATCATGAACTTCAAAACTT+GGG | 0.511886 | 3_2:-9627321 | None:intergenic |
| GAATAAATGCAAAGCAAGAA+GGG | 0.521406 | 3_2:-9627117 | None:intergenic |
| ATGTCGTATGTTTGAGAACA+AGG | 0.524271 | 3_2:+9627399 | Msa0394610:CDS |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 3_2:+9620634 | Msa0394610:CDS |
| TAAGATATATAGATGGGATG+TGG | 0.528498 | 3_2:+9620799 | Msa0394610:intron |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 3_2:-9627153 | None:intergenic |
| CCATGATTCTTTATTGCTAG+GGG | 0.537011 | 3_2:-9620459 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 3_2:+9627173 | Msa0394610:CDS |
| AATCGAACAAGTGAGTGGTC+TGG | 0.543268 | 3_2:-9626959 | None:intergenic |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 3_2:+9620635 | Msa0394610:CDS |
| AAGATCTTGGAGTTCTTAGG+TGG | 0.553166 | 3_2:+9627445 | Msa0394610:intron |
| CTGAAATCGACTGTCAATGT+TGG | 0.562083 | 3_2:+9627556 | Msa0394610:CDS |
| GGCCTACCTCAGACTTTAGG+TGG | 0.565384 | 3_2:+9626810 | Msa0394610:CDS |
| TCTTCAAAAGTAGCTGCTGT+TGG | 0.568528 | 3_2:+9627766 | Msa0394610:CDS |
| GGACCGCATCAGCTGACTGT+TGG | 0.570066 | 3_2:-9627077 | None:intergenic |
| TTTGAAGACTTAGATGGCGT+CGG | 0.575863 | 3_2:-9627751 | None:intergenic |
| GTTATGGGTCAAGGAGTTGG+AGG | 0.578191 | 3_2:+9620953 | Msa0394610:CDS |
| TCTTATGAAGTTATGGGTCA+AGG | 0.580120 | 3_2:+9620944 | Msa0394610:CDS |
| ATCATGAACTTCAAAACTTG+GGG | 0.582711 | 3_2:-9627320 | None:intergenic |
| ATCCCAACAGTCAGCTGATG+CGG | 0.597403 | 3_2:+9627074 | Msa0394610:CDS |
| CTTACGCAAATCGTATGCAT+TGG | 0.597846 | 3_2:+9626843 | Msa0394610:CDS |
| TATGATGATGCTGATAATGA+CGG | 0.599988 | 3_2:+9627250 | Msa0394610:CDS |
| ACCAGTGGACTGTCTGCTGT+TGG | 0.602965 | 3_2:-9620683 | None:intergenic |
| TCACTGATTCATGCTGAGAG+TGG | 0.606950 | 3_2:+9620380 | Msa0394610:CDS |
| TCCAAAACATCAACATTCGA+AGG | 0.607058 | 3_2:-9627274 | None:intergenic |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 3_2:+9627159 | Msa0394610:CDS |
| GCCAACAGCAGACAGTCCAC+TGG | 0.611268 | 3_2:+9620682 | Msa0394610:CDS |
| ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 3_2:+9620335 | Msa0394610:CDS |
| TGTCGTATGTTTGAGAACAA+GGG | 0.616141 | 3_2:+9627400 | Msa0394610:CDS |
| ATGATGATGCTGATAATGAC+GGG | 0.620534 | 3_2:+9627251 | Msa0394610:CDS |
| TTCACAAACTCAATAACCAG+TGG | 0.633415 | 3_2:-9620698 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.637387 | 3_2:+9620958 | Msa0394610:CDS |
| TGTTGGTGAAACATCTGCTG+GGG | 0.639082 | 3_2:+9627783 | Msa0394610:CDS |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 3_2:+9626997 | Msa0394610:intron |
| GATTTCAGCTTATCGACAGA+CGG | 0.652942 | 3_2:-9627541 | None:intergenic |
| GACAAGCCACCTAAAGTCTG+AGG | 0.653221 | 3_2:-9626816 | None:intergenic |
| TAAAGAATCGAACAAGTGAG+TGG | 0.654901 | 3_2:-9626964 | None:intergenic |
| TCTTTCTTTGAACTTTGGTG+CGG | 0.659854 | 3_2:-9627815 | None:intergenic |
| AATAAATGCAAAGCAAGAAG+GGG | 0.664515 | 3_2:-9627116 | None:intergenic |
| AGCCACCTAAAGTCTGAGGT+AGG | 0.684957 | 3_2:-9626812 | None:intergenic |
| AGGGGTGTACTTGTTTACAA+CGG | 0.695086 | 3_2:-9627098 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTGGAAAAATAAAATT+TGG | - | chr3_2:9624339-9624358 | None:intergenic | 10.0% |
| !! | AATTATAACAATTAAAATCA+GGG | - | chr3_2:9624486-9624505 | None:intergenic | 10.0% |
| !! | AAATTATAACAATTAAAATC+AGG | - | chr3_2:9624487-9624506 | None:intergenic | 10.0% |
| !! | TTTGCAAATGTAAATAAAAA+TGG | - | chr3_2:9622927-9622946 | None:intergenic | 15.0% |
| !! | AAACATTAAAAAAAAAAGGA+CGG | - | chr3_2:9623945-9623964 | None:intergenic | 15.0% |
| !!! | TTAATGTTTTTTTATTTTGC+AGG | + | chr3_2:9623956-9623975 | Msa0394610:intron | 15.0% |
| !! | AAAAAAAAAAAGTGAAAAGA+TGG | + | chr3_2:9624015-9624034 | Msa0394610:intron | 15.0% |
| !!! | GATAATGTTCTTTTTTTTTT+TGG | - | chr3_2:9624719-9624738 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACACACAAAAA+TGG | + | chr3_2:9624741-9624760 | Msa0394610:intron | 15.0% |
| !! | AAAAAGACAATAAAATGAAA+AGG | + | chr3_2:9624774-9624793 | Msa0394610:intron | 15.0% |
| !! | AAAAGACAATAAAATGAAAA+GGG | + | chr3_2:9624775-9624794 | Msa0394610:intron | 15.0% |
| !! | TTATGGAAAAATAATTGTAA+AGG | - | chr3_2:9624869-9624888 | None:intergenic | 15.0% |
| !!! | TTTACAATTATTTTTCCATA+AGG | + | chr3_2:9624868-9624887 | Msa0394610:intron | 15.0% |
| !! | TTTGCAAATGTAAATAAAAA+TGG | - | chr3_2:9622927-9622946 | None:intergenic | 15.0% |
| !!! | TTTTGATGAGTTAAATAATT+TGG | + | chr3_2:9626715-9626734 | Msa0394610:intron | 15.0% |
| !!! | AAAGAGATTGAAGATTTTTA+TGG | + | chr3_2:9620506-9620525 | Msa0394610:intron | 20.0% |
| !! | ACAAAACAAGAAATTTGATA+AGG | + | chr3_2:9620589-9620608 | Msa0394610:CDS | 20.0% |
| !! | ATGTGTATAAGATATATAGA+TGG | + | chr3_2:9620792-9620811 | Msa0394610:intron | 20.0% |
| !! | TGTGTATAAGATATATAGAT+GGG | + | chr3_2:9620793-9620812 | Msa0394610:intron | 20.0% |
| !! | TGAATATCATAGTAAAAAGA+TGG | - | chr3_2:9621106-9621125 | None:intergenic | 20.0% |
| !!! | AAGACATAACTAGTATTTTT+TGG | + | chr3_2:9621140-9621159 | Msa0394610:CDS | 20.0% |
| !! | ACATACTTATTAGAATACTT+AGG | + | chr3_2:9621526-9621545 | Msa0394610:intron | 20.0% |
| !!! | AGTCATTTTAGTTAAGTTTT+TGG | + | chr3_2:9621883-9621902 | Msa0394610:intron | 20.0% |
| !! | TCAAATAGTAACATTATTAG+TGG | + | chr3_2:9621976-9621995 | Msa0394610:intron | 20.0% |
| !! | CTAGCTAATTTCTATTAATT+AGG | + | chr3_2:9622433-9622452 | Msa0394610:intron | 20.0% |
| !! | TCTCTTAGAACAATTATATT+GGG | - | chr3_2:9622571-9622590 | None:intergenic | 20.0% |
| !! | TTCTCTTAGAACAATTATAT+TGG | - | chr3_2:9622572-9622591 | None:intergenic | 20.0% |
| !! | ATTTATGTTGTTCTATCTAA+CGG | + | chr3_2:9622628-9622647 | Msa0394610:intron | 20.0% |
| !! | ACGAATTAACAAATTAACTT+AGG | - | chr3_2:9622787-9622806 | None:intergenic | 20.0% |
| !! | AATGTAAATAAAAATGGTTC+AGG | - | chr3_2:9622921-9622940 | None:intergenic | 20.0% |
| !! | ATTAAGGATGTATGTAAATA+GGG | - | chr3_2:9622973-9622992 | None:intergenic | 20.0% |
| !! | TATTAAGGATGTATGTAAAT+AGG | - | chr3_2:9622974-9622993 | None:intergenic | 20.0% |
| !! | AACATTAAAAAAAAAAGGAC+GGG | - | chr3_2:9623944-9623963 | None:intergenic | 20.0% |
| !! | AAATAAAATAAGAACTGATG+TGG | - | chr3_2:9624061-9624080 | None:intergenic | 20.0% |
| !! | CAATTAAAGTTACTGAAAAA+TGG | - | chr3_2:9624131-9624150 | None:intergenic | 20.0% |
| !! | AACACTCTATATAAGTAAAT+TGG | - | chr3_2:9624354-9624373 | None:intergenic | 20.0% |
| !! | AAAGACAATAAAATGAAAAG+GGG | + | chr3_2:9624776-9624795 | Msa0394610:intron | 20.0% |
| !!! | AGTCATTTTAGTTAAGTTTT+TGG | + | chr3_2:9621883-9621902 | Msa0394610:intron | 20.0% |
| !! | TCAAATAGTAACATTATTAG+TGG | + | chr3_2:9621976-9621995 | Msa0394610:intron | 20.0% |
| !! | CTAGCTAATTTCTATTAATT+AGG | + | chr3_2:9622433-9622452 | Msa0394610:intron | 20.0% |
| !! | TCTCTTAGAACAATTATATT+GGG | - | chr3_2:9622571-9622590 | None:intergenic | 20.0% |
| !! | TTCTCTTAGAACAATTATAT+TGG | - | chr3_2:9622572-9622591 | None:intergenic | 20.0% |
| !! | ATTTATGTTGTTCTATCTAA+CGG | + | chr3_2:9622628-9622647 | Msa0394610:intron | 20.0% |
| !! | ACGAATTAACAAATTAACTT+AGG | - | chr3_2:9622787-9622806 | None:intergenic | 20.0% |
| !! | AATGTAAATAAAAATGGTTC+AGG | - | chr3_2:9622921-9622940 | None:intergenic | 20.0% |
| !! | ATTAAGGATGTATGTAAATA+GGG | - | chr3_2:9622973-9622992 | None:intergenic | 20.0% |
| !! | TATTAAGGATGTATGTAAAT+AGG | - | chr3_2:9622974-9622993 | None:intergenic | 20.0% |
| !!! | AATCAGATTTTGACTATAAT+TGG | + | chr3_2:9626756-9626775 | Msa0394610:CDS | 20.0% |
| !!! | ATCAGATTTTGACTATAATT+GGG | + | chr3_2:9626757-9626776 | Msa0394610:CDS | 20.0% |
| !!! | ATGATGATAAATTGTTTTGA+TGG | + | chr3_2:9626785-9626804 | Msa0394610:CDS | 20.0% |
| !! | ATAACACTGGATTTTCTATT+AGG | + | chr3_2:9620540-9620559 | Msa0394610:intron | 25.0% |
| ! | ATTTACTTAATCCAAACAAC+AGG | + | chr3_2:9620660-9620679 | Msa0394610:CDS | 25.0% |
| ! | CAACTAGATTATTCTCTATT+CGG | + | chr3_2:9621178-9621197 | Msa0394610:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr3_2:9621227-9621246 | Msa0394610:CDS | 25.0% |
| ! | AGTAAAAAACACTAACCTAA+TGG | - | chr3_2:9621253-9621272 | None:intergenic | 25.0% |
| !! | TTACTTTCATTAAGTTGTTC+TGG | + | chr3_2:9621296-9621315 | Msa0394610:intron | 25.0% |
| ! | TCTTACTTATTTGAACTACA+CGG | + | chr3_2:9621372-9621391 | Msa0394610:intron | 25.0% |
| ! | CAAACTTAAATGATGTTGAT+TGG | + | chr3_2:9621450-9621469 | Msa0394610:intron | 25.0% |
| !!! | ATTTATATTTTGAACTGCCT+AGG | + | chr3_2:9621474-9621493 | Msa0394610:intron | 25.0% |
| !! | TGTTGTATTTTGTTCTGATA+TGG | + | chr3_2:9621711-9621730 | Msa0394610:intron | 25.0% |
| ! | TAAATTTCAGTTGCCTTTAT+TGG | + | chr3_2:9621740-9621759 | Msa0394610:intron | 25.0% |
| ! | ATGATTGTCAAAACCAATAA+AGG | - | chr3_2:9621756-9621775 | None:intergenic | 25.0% |
| ! | GAATAAAAATGCAACATGTA+TGG | + | chr3_2:9622026-9622045 | Msa0394610:intron | 25.0% |
| ! | TATTATAAAAAAGGAACACG+TGG | + | chr3_2:9622136-9622155 | Msa0394610:intron | 25.0% |
| !!! | AAGGTTTTTAAGATCACTTT+TGG | + | chr3_2:9622198-9622217 | Msa0394610:intron | 25.0% |
| ! | GACAGTGATAATTGAATTAA+CGG | + | chr3_2:9622676-9622695 | Msa0394610:intron | 25.0% |
| ! | TCATAATTCTCTAATTCCTT+AGG | - | chr3_2:9622732-9622751 | None:intergenic | 25.0% |
| !!! | AATTGGTTTGAGAAATGATA+TGG | - | chr3_2:9622895-9622914 | None:intergenic | 25.0% |
| ! | AAAAATGGTTCAGGTAAAAT+TGG | - | chr3_2:9622912-9622931 | None:intergenic | 25.0% |
| ! | TTAAGGATGTATGTAAATAG+GGG | - | chr3_2:9622972-9622991 | None:intergenic | 25.0% |
| !! | CTAAAAGTCTATCAAGTTTT+TGG | + | chr3_2:9623084-9623103 | Msa0394610:intron | 25.0% |
| ! | TGGAAATTTCGTTATTGTTT+AGG | + | chr3_2:9623141-9623160 | Msa0394610:intron | 25.0% |
| ! | ATGAAAAACATTTGCTTTCT+TGG | + | chr3_2:9623352-9623371 | Msa0394610:intron | 25.0% |
| !! | ACAAACATTTGTTACAAAAC+TGG | - | chr3_2:9624199-9624218 | None:intergenic | 25.0% |
| ! | ATAACAATTAAAATCAGGGT+AGG | - | chr3_2:9624482-9624501 | None:intergenic | 25.0% |
| !!! | TAGGTTTAGAACTTTTTGTT+CGG | + | chr3_2:9624534-9624553 | Msa0394610:intron | 25.0% |
| ! | CTAACTCAGAAAAACAATAT+GGG | - | chr3_2:9624601-9624620 | None:intergenic | 25.0% |
| ! | ATGTTGCTAAAGATTAAGTT+TGG | + | chr3_2:9624631-9624650 | Msa0394610:intron | 25.0% |
| ! | TGTTGCTAAAGATTAAGTTT+GGG | + | chr3_2:9624632-9624651 | Msa0394610:intron | 25.0% |
| ! | AATTTCCAACCAATTAAGTT+TGG | + | chr3_2:9624666-9624685 | Msa0394610:intron | 25.0% |
| ! | ATTTCCAACCAATTAAGTTT+GGG | + | chr3_2:9624667-9624686 | Msa0394610:intron | 25.0% |
| ! | AGAGAATACTTGTAACTATT+AGG | - | chr3_2:9624842-9624861 | None:intergenic | 25.0% |
| ! | GAATAAAAATGCAACATGTA+TGG | + | chr3_2:9622026-9622045 | Msa0394610:intron | 25.0% |
| ! | TATTATAAAAAAGGAACACG+TGG | + | chr3_2:9622136-9622155 | Msa0394610:intron | 25.0% |
| !!! | AAGGTTTTTAAGATCACTTT+TGG | + | chr3_2:9622198-9622217 | Msa0394610:intron | 25.0% |
| ! | GACAGTGATAATTGAATTAA+CGG | + | chr3_2:9622676-9622695 | Msa0394610:intron | 25.0% |
| ! | TCATAATTCTCTAATTCCTT+AGG | - | chr3_2:9622732-9622751 | None:intergenic | 25.0% |
| !!! | AATTGGTTTGAGAAATGATA+TGG | - | chr3_2:9622895-9622914 | None:intergenic | 25.0% |
| ! | AAAAATGGTTCAGGTAAAAT+TGG | - | chr3_2:9622912-9622931 | None:intergenic | 25.0% |
| ! | TTAAGGATGTATGTAAATAG+GGG | - | chr3_2:9622972-9622991 | None:intergenic | 25.0% |
| !!! | TGATAAATTGTTTTGATGGA+AGG | + | chr3_2:9626789-9626808 | Msa0394610:CDS | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr3_2:9626982-9627001 | Msa0394610:intron | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr3_2:9627156-9627175 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr3_2:9627156-9627175 | Msa0394610:CDS | 25.0% |
| !! | AACTTTGAAAAACTTCTCAA+AGG | - | chr3_2:9627203-9627222 | None:intergenic | 25.0% |
| !! | CAAAGTTTTCACAATTGATA+AGG | + | chr3_2:9627216-9627235 | Msa0394610:intron | 25.0% |
| !! | AGAAAAATTTTAGATGACTC+TGG | - | chr3_2:9627664-9627683 | None:intergenic | 25.0% |
| !!! | TCATCTAAAATTTTTCTCGA+CGG | + | chr3_2:9627667-9627686 | Msa0394610:CDS | 25.0% |
| TCCATGATTCTTTATTGCTA+GGG | - | chr3_2:9620463-9620482 | None:intergenic | 30.0% | |
| TTCCATGATTCTTTATTGCT+AGG | - | chr3_2:9620464-9620483 | None:intergenic | 30.0% | |
| GGTAATTATGCATATAACAC+TGG | + | chr3_2:9620527-9620546 | Msa0394610:intron | 30.0% | |
| CGTTATGTTTGTAACAAAGA+AGG | + | chr3_2:9620623-9620642 | Msa0394610:CDS | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr3_2:9620634-9620653 | Msa0394610:CDS | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr3_2:9620635-9620654 | Msa0394610:CDS | 30.0% | |
| TAAGATATATAGATGGGATG+TGG | + | chr3_2:9620799-9620818 | Msa0394610:intron | 30.0% | |
| ! | GAATGCTTTGGTTTATGTAA+TGG | - | chr3_2:9620836-9620855 | None:intergenic | 30.0% |
| TTACTTCTCGAAATGATCTA+AGG | - | chr3_2:9620865-9620884 | None:intergenic | 30.0% | |
| !! | GCTCTTATAAATTCTAAAGC+TGG | + | chr3_2:9620905-9620924 | Msa0394610:CDS | 30.0% |
| AGAACGTCTTATGAAGTTAT+GGG | + | chr3_2:9620938-9620957 | Msa0394610:CDS | 30.0% | |
| TTTAAGTCTGAAAACCGAAA+AGG | - | chr3_2:9620992-9621011 | None:intergenic | 30.0% | |
| !!! | ACTAGTATTTTTTGGTCAGA+TGG | + | chr3_2:9621148-9621167 | Msa0394610:CDS | 30.0% |
| GCCGATATTTATTGTTTGTT+CGG | - | chr3_2:9621231-9621250 | None:intergenic | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr3_2:9621235-9621254 | Msa0394610:CDS | 30.0% | |
| !!! | TAGTGTTTTTTACTTCTCTC+AGG | + | chr3_2:9621259-9621278 | Msa0394610:intron | 30.0% |
| TAAGAACTATAGTCAATCCT+AGG | - | chr3_2:9621357-9621376 | None:intergenic | 30.0% | |
| CTTACTTATTTGAACTACAC+GGG | + | chr3_2:9621373-9621392 | Msa0394610:intron | 30.0% | |
| ! | TTTAACCATGCTGTTTGTTT+AGG | + | chr3_2:9621396-9621415 | Msa0394610:intron | 30.0% |
| ! | TTAACCATGCTGTTTGTTTA+GGG | + | chr3_2:9621397-9621416 | Msa0394610:intron | 30.0% |
| TAAGTTTGTCTCAAACCAAA+TGG | - | chr3_2:9621438-9621457 | None:intergenic | 30.0% | |
| CAATTAGGATTAGGAAAGAA+AGG | + | chr3_2:9622250-9622269 | Msa0394610:intron | 30.0% | |
| ! | CTCCTCAATTTTCTTTCAAT+CGG | - | chr3_2:9622344-9622363 | None:intergenic | 30.0% |
| GGTGAATCTATAATCATCAA+AGG | - | chr3_2:9622711-9622730 | None:intergenic | 30.0% | |
| GATGATTATAGATTCACCTA+AGG | + | chr3_2:9622713-9622732 | Msa0394610:intron | 30.0% | |
| GAGAATTATGATTAGATGAG+AGG | + | chr3_2:9622741-9622760 | Msa0394610:intron | 30.0% | |
| AATGATATGGAGAGATGATT+AGG | - | chr3_2:9622882-9622901 | None:intergenic | 30.0% | |
| CGGTAGTAACGTTATTATTA+AGG | - | chr3_2:9622989-9623008 | None:intergenic | 30.0% | |
| TTATAAGATTCGTATCCACA+GGG | - | chr3_2:9623030-9623049 | None:intergenic | 30.0% | |
| TTTATAAGATTCGTATCCAC+AGG | - | chr3_2:9623031-9623050 | None:intergenic | 30.0% | |
| ACTGTTGAATTATTTCAGCT+TGG | + | chr3_2:9623121-9623140 | Msa0394610:intron | 30.0% | |
| TTTCTTGGAAGATAGAACAA+CGG | + | chr3_2:9623367-9623386 | Msa0394610:intron | 30.0% | |
| GGTACATCTATTCTTCTTTA+AGG | + | chr3_2:9623724-9623743 | Msa0394610:intron | 30.0% | |
| ! | ACATCTATTCTTCTTTAAGG+TGG | + | chr3_2:9623727-9623746 | Msa0394610:intron | 30.0% |
| !! | CATCTATTCTTCTTTAAGGT+GGG | + | chr3_2:9623728-9623747 | Msa0394610:intron | 30.0% |
| TCTTTCTTCTTTCTCTTCTT+TGG | - | chr3_2:9623831-9623850 | None:intergenic | 30.0% | |
| GTAACAAATGTTTGTTCAAG+TGG | + | chr3_2:9624204-9624223 | Msa0394610:intron | 30.0% | |
| TGGTATTCCAAAAGTTCAAA+AGG | + | chr3_2:9624224-9624243 | Msa0394610:intron | 30.0% | |
| TATTCCAAAAGTTCAAAAGG+AGG | + | chr3_2:9624227-9624246 | Msa0394610:intron | 30.0% | |
| !!! | ACCTTACAGTTTTGATTTCT+GGG | - | chr3_2:9624310-9624329 | None:intergenic | 30.0% |
| !!! | AACCTTACAGTTTTGATTTC+TGG | - | chr3_2:9624311-9624330 | None:intergenic | 30.0% |
| AATCAAAACTGTAAGGTTCA+TGG | + | chr3_2:9624313-9624332 | Msa0394610:intron | 30.0% | |
| !! | GTTCTAGAAATGTAAATGCA+TGG | - | chr3_2:9624377-9624396 | None:intergenic | 30.0% |
| !! | ACAAAAAGTTCTAAACCTAC+CGG | - | chr3_2:9624533-9624552 | None:intergenic | 30.0% |
| ! | TTACAAGCTTAGAGACTTTT+AGG | + | chr3_2:9624569-9624588 | Msa0394610:intron | 30.0% |
| CCTAACTCAGAAAAACAATA+TGG | - | chr3_2:9624602-9624621 | None:intergenic | 30.0% | |
| !! | CCATATTGTTTTTCTGAGTT+AGG | + | chr3_2:9624599-9624618 | Msa0394610:intron | 30.0% |
| GTTGCTAAAGATTAAGTTTG+GGG | + | chr3_2:9624633-9624652 | Msa0394610:intron | 30.0% | |
| TTTCCAACCAATTAAGTTTG+GGG | + | chr3_2:9624668-9624687 | Msa0394610:intron | 30.0% | |
| ! | CAATCGAGTTTAAAGTTACT+CGG | - | chr3_2:9624818-9624837 | None:intergenic | 30.0% |
| ! | GACTACACAAAATTTGAGTT+AGG | - | chr3_2:9624940-9624959 | None:intergenic | 30.0% |
| TCCACGCAAAAATATGAAAA+GGG | - | chr3_2:9625111-9625130 | None:intergenic | 30.0% | |
| ! | TTTAACAAGTTTGTTCCTTG+AGG | + | chr3_2:9625247-9625266 | Msa0394610:intron | 30.0% |
| ! | TTAACAAGTTTGTTCCTTGA+GGG | + | chr3_2:9625248-9625267 | Msa0394610:intron | 30.0% |
| CAATTAGGATTAGGAAAGAA+AGG | + | chr3_2:9622250-9622269 | Msa0394610:intron | 30.0% | |
| ! | CTCCTCAATTTTCTTTCAAT+CGG | - | chr3_2:9622344-9622363 | None:intergenic | 30.0% |
| GGTGAATCTATAATCATCAA+AGG | - | chr3_2:9622711-9622730 | None:intergenic | 30.0% | |
| GATGATTATAGATTCACCTA+AGG | + | chr3_2:9622713-9622732 | Msa0394610:intron | 30.0% | |
| GAGAATTATGATTAGATGAG+AGG | + | chr3_2:9622741-9622760 | Msa0394610:intron | 30.0% | |
| AATGATATGGAGAGATGATT+AGG | - | chr3_2:9622882-9622901 | None:intergenic | 30.0% | |
| CGGTAGTAACGTTATTATTA+AGG | - | chr3_2:9622989-9623008 | None:intergenic | 30.0% | |
| TTATAAGATTCGTATCCACA+GGG | - | chr3_2:9623030-9623049 | None:intergenic | 30.0% | |
| TTTATAAGATTCGTATCCAC+AGG | - | chr3_2:9623031-9623050 | None:intergenic | 30.0% | |
| ! | TCAATTTCGAATAGTTTTCC+AGG | + | chr3_2:9626614-9626633 | Msa0394610:intron | 30.0% |
| GAGAATGCAAAGAAAAATCT+TGG | + | chr3_2:9626671-9626690 | Msa0394610:intron | 30.0% | |
| AATAAATGCAAAGCAAGAAG+GGG | - | chr3_2:9627119-9627138 | None:intergenic | 30.0% | |
| GAATAAATGCAAAGCAAGAA+GGG | - | chr3_2:9627120-9627139 | None:intergenic | 30.0% | |
| TGAATAAATGCAAAGCAAGA+AGG | - | chr3_2:9627121-9627140 | None:intergenic | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr3_2:9627161-9627180 | None:intergenic | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr3_2:9627159-9627178 | Msa0394610:CDS | 30.0% | |
| ! | TATGATGATGCTGATAATGA+CGG | + | chr3_2:9627250-9627269 | Msa0394610:CDS | 30.0% |
| ATCATGAACTTCAAAACTTG+GGG | - | chr3_2:9627323-9627342 | None:intergenic | 30.0% | |
| GATCATGAACTTCAAAACTT+GGG | - | chr3_2:9627324-9627343 | None:intergenic | 30.0% | |
| !! | TTCATGATCGATTTGATGAA+AGG | + | chr3_2:9627335-9627354 | Msa0394610:CDS | 30.0% |
| !!! | GACAATATGTTTTAAAGCGT+TGG | + | chr3_2:9627503-9627522 | Msa0394610:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr3_2:9627823-9627842 | None:intergenic | 30.0% |
| ATATCAACTTCATCTGAGAG+TGG | + | chr3_2:9620335-9620354 | Msa0394610:CDS | 35.0% | |
| CCATGATTCTTTATTGCTAG+GGG | - | chr3_2:9620462-9620481 | None:intergenic | 35.0% | |
| TTCACAAACTCAATAACCAG+TGG | - | chr3_2:9620701-9620720 | None:intergenic | 35.0% | |
| GAAAGTGAAAGAAAAACCTG+AGG | + | chr3_2:9620718-9620737 | Msa0394610:CDS | 35.0% | |
| TGAAAGAAAAACCTGAGGAA+AGG | + | chr3_2:9620723-9620742 | Msa0394610:CDS | 35.0% | |
| GAAAGAAAAACCTGAGGAAA+GGG | + | chr3_2:9620724-9620743 | Msa0394610:CDS | 35.0% | |
| ! | AGCTGGAATATATTTGAAGC+TGG | + | chr3_2:9620757-9620776 | Msa0394610:CDS | 35.0% |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr3_2:9620875-9620894 | Msa0394610:CDS | 35.0% | |
| GAGAACGTCTTATGAAGTTA+TGG | + | chr3_2:9620937-9620956 | Msa0394610:CDS | 35.0% | |
| TCTTATGAAGTTATGGGTCA+AGG | + | chr3_2:9620944-9620963 | Msa0394610:CDS | 35.0% | |
| GACAATTCGTCAAAAAGAGA+TGG | + | chr3_2:9621024-9621043 | Msa0394610:CDS | 35.0% | |
| AATTCGTCAAAAAGAGATGG+TGG | + | chr3_2:9621027-9621046 | Msa0394610:CDS | 35.0% | |
| GTAAAAAGATGGTTTCGAGA+GGG | - | chr3_2:9621095-9621114 | None:intergenic | 35.0% | |
| AGTAAAAAGATGGTTTCGAG+AGG | - | chr3_2:9621096-9621115 | None:intergenic | 35.0% | |
| AAATCCCTAAACAAACAGCA+TGG | - | chr3_2:9621404-9621423 | None:intergenic | 35.0% | |
| ! | ATTTAGTTTACGCAATGCTG+AGG | + | chr3_2:9621560-9621579 | Msa0394610:intron | 35.0% |
| !!! | CATCGAAAGAGTGTTTTGTT+TGG | + | chr3_2:9621773-9621792 | Msa0394610:intron | 35.0% |
| CCACATTCAAATTCTTCTCA+TGG | - | chr3_2:9622052-9622071 | None:intergenic | 35.0% | |
| CCATGAGAAGAATTTGAATG+TGG | + | chr3_2:9622049-9622068 | Msa0394610:intron | 35.0% | |
| AGAAGAATTTGAATGTGGCA+TGG | + | chr3_2:9622054-9622073 | Msa0394610:intron | 35.0% | |
| TAAAAACCTTGTGTGTGTCA+TGG | - | chr3_2:9622188-9622207 | None:intergenic | 35.0% | |
| !! | CACTTTTGGAAAGAGAAAGA+AGG | + | chr3_2:9622212-9622231 | Msa0394610:intron | 35.0% |
| ! | CATTCACGTTTTGTGCAATT+AGG | + | chr3_2:9622235-9622254 | Msa0394610:intron | 35.0% |
| ! | CGTTTTGTGCAATTAGGATT+AGG | + | chr3_2:9622241-9622260 | Msa0394610:intron | 35.0% |
| ! | CACCGATTGAAAGAAAATTG+AGG | + | chr3_2:9622339-9622358 | Msa0394610:intron | 35.0% |
| CTCATAAACGTAAGAGTTTC+AGG | - | chr3_2:9622495-9622514 | None:intergenic | 35.0% | |
| ! | TTCTATCTAACGGACAATCT+AGG | + | chr3_2:9622638-9622657 | Msa0394610:intron | 35.0% |
| ! | TCTATCTAACGGACAATCTA+GGG | + | chr3_2:9622639-9622658 | Msa0394610:intron | 35.0% |
| ATGATTAGATGAGAGGACTT+AGG | + | chr3_2:9622748-9622767 | Msa0394610:intron | 35.0% | |
| ! | GTTGACTTTGTGACATTTGT+AGG | + | chr3_2:9622808-9622827 | Msa0394610:intron | 35.0% |
| CATTTGTAGGCTTAAGAAAC+AGG | + | chr3_2:9622821-9622840 | Msa0394610:intron | 35.0% | |
| TGAAATAATTCAACAGTCCC+CGG | - | chr3_2:9623118-9623137 | None:intergenic | 35.0% | |
| ! | GTTTTGCAGTTATGATAGAC+AGG | + | chr3_2:9623277-9623296 | Msa0394610:intron | 35.0% |
| TTCTTGGAAGATAGAACAAC+GGG | + | chr3_2:9623368-9623387 | Msa0394610:intron | 35.0% | |
| AAATGCAAGATGTGATCATG+AGG | + | chr3_2:9623410-9623429 | Msa0394610:intron | 35.0% | |
| ! | GACAAATTTGAAGTTCAGTG+TGG | + | chr3_2:9623546-9623565 | Msa0394610:intron | 35.0% |
| AAAGAAACCATTCCTTTGCA+AGG | + | chr3_2:9623702-9623721 | Msa0394610:intron | 35.0% | |
| AAGAAACCATTCCTTTGCAA+GGG | + | chr3_2:9623703-9623722 | Msa0394610:intron | 35.0% | |
| ! | AATTGCTAGACTTTTGGCAT+TGG | - | chr3_2:9623760-9623779 | None:intergenic | 35.0% |
| AATGCCAAAAGTCTAGCAAT+TGG | + | chr3_2:9623759-9623778 | Msa0394610:intron | 35.0% | |
| ! | TGATCCAATTGCTAGACTTT+TGG | - | chr3_2:9623766-9623785 | None:intergenic | 35.0% |
| AAAGTCTAGCAATTGGATCA+TGG | + | chr3_2:9623766-9623785 | Msa0394610:intron | 35.0% | |
| AAGTCTAGCAATTGGATCAT+GGG | + | chr3_2:9623767-9623786 | Msa0394610:intron | 35.0% | |
| ! | GCTACTTTGTATGAAGTTCA+TGG | + | chr3_2:9623797-9623816 | Msa0394610:intron | 35.0% |
| TCTTCTTTCTCTTCTTTGGT+AGG | - | chr3_2:9623827-9623846 | None:intergenic | 35.0% | |
| !! | ACGTAAAAGAAAGCGTTTGA+TGG | + | chr3_2:9623911-9623930 | Msa0394610:intron | 35.0% |
| !! | CGTAAAAGAAAGCGTTTGAT+GGG | + | chr3_2:9623912-9623931 | Msa0394610:intron | 35.0% |
| TCCCAGAAATCAAAACTGTA+AGG | + | chr3_2:9624306-9624325 | Msa0394610:intron | 35.0% | |
| ! | TTTTCTTAGCCAAATTGAGC+CGG | + | chr3_2:9624511-9624530 | Msa0394610:intron | 35.0% |
| ! | ATTAAGTTTGGGGTTGCTAT+TGG | + | chr3_2:9624643-9624662 | Msa0394610:intron | 35.0% |
| TCCATAAGGTGAATGAATGA+TGG | + | chr3_2:9624882-9624901 | Msa0394610:intron | 35.0% | |
| TCCATCATTCATTCACCTTA+TGG | - | chr3_2:9624886-9624905 | None:intergenic | 35.0% | |
| ! | ATTTTGTGCTTAACTTCCGT+AGG | + | chr3_2:9624910-9624929 | Msa0394610:intron | 35.0% |
| ! | ATTTGAGTTAGGCATTCCTA+CGG | - | chr3_2:9624929-9624948 | None:intergenic | 35.0% |
| ! | AGGTCTTTAAGGGTTATAAC+GGG | - | chr3_2:9624998-9625017 | None:intergenic | 35.0% |
| ! | GAGGTCTTTAAGGGTTATAA+CGG | - | chr3_2:9624999-9625018 | None:intergenic | 35.0% |
| !! | TTAGAAACTTTTCAAGCGTG+TGG | + | chr3_2:9625052-9625071 | Msa0394610:intron | 35.0% |
| !! | ACCCTTTTCATATTTTTGCG+TGG | + | chr3_2:9625107-9625126 | Msa0394610:intron | 35.0% |
| CTCCACGCAAAAATATGAAA+AGG | - | chr3_2:9625112-9625131 | None:intergenic | 35.0% | |
| !!! | TAGCTCACTTTTAGCTTGTA+AGG | + | chr3_2:9625163-9625182 | Msa0394610:intron | 35.0% |
| ! | TTGTAAGGAGAGGAACTTTT+GGG | + | chr3_2:9625178-9625197 | Msa0394610:intron | 35.0% |
| ! | GCAAGTAACAGTTCAAGTTT+GGG | + | chr3_2:9625270-9625289 | Msa0394610:intron | 35.0% |
| ! | CAAGTAACAGTTCAAGTTTG+GGG | + | chr3_2:9625271-9625290 | Msa0394610:intron | 35.0% |
| CCACATTCAAATTCTTCTCA+TGG | - | chr3_2:9622052-9622071 | None:intergenic | 35.0% | |
| CCATGAGAAGAATTTGAATG+TGG | + | chr3_2:9622049-9622068 | Msa0394610:intron | 35.0% | |
| AGAAGAATTTGAATGTGGCA+TGG | + | chr3_2:9622054-9622073 | Msa0394610:intron | 35.0% | |
| TAAAAACCTTGTGTGTGTCA+TGG | - | chr3_2:9622188-9622207 | None:intergenic | 35.0% | |
| !! | CACTTTTGGAAAGAGAAAGA+AGG | + | chr3_2:9622212-9622231 | Msa0394610:intron | 35.0% |
| ! | CATTCACGTTTTGTGCAATT+AGG | + | chr3_2:9622235-9622254 | Msa0394610:intron | 35.0% |
| ! | CGTTTTGTGCAATTAGGATT+AGG | + | chr3_2:9622241-9622260 | Msa0394610:intron | 35.0% |
| ! | CACCGATTGAAAGAAAATTG+AGG | + | chr3_2:9622339-9622358 | Msa0394610:intron | 35.0% |
| CTCATAAACGTAAGAGTTTC+AGG | - | chr3_2:9622495-9622514 | None:intergenic | 35.0% | |
| ! | TTCTATCTAACGGACAATCT+AGG | + | chr3_2:9622638-9622657 | Msa0394610:intron | 35.0% |
| ! | TCTATCTAACGGACAATCTA+GGG | + | chr3_2:9622639-9622658 | Msa0394610:intron | 35.0% |
| ATGATTAGATGAGAGGACTT+AGG | + | chr3_2:9622748-9622767 | Msa0394610:intron | 35.0% | |
| ! | GTTGACTTTGTGACATTTGT+AGG | + | chr3_2:9622808-9622827 | Msa0394610:intron | 35.0% |
| CATTTGTAGGCTTAAGAAAC+AGG | + | chr3_2:9622821-9622840 | Msa0394610:intron | 35.0% | |
| AATCGTCTGTGGTTTCTTAT+TGG | - | chr3_2:9626564-9626583 | None:intergenic | 35.0% | |
| TGGTCTTTATAAATCGTCTG+TGG | - | chr3_2:9626575-9626594 | None:intergenic | 35.0% | |
| ACAGACGATTTATAAAGACC+AGG | + | chr3_2:9626574-9626593 | Msa0394610:intron | 35.0% | |
| ! | AGTTTTCCAGGTGTTTTTCA+TGG | + | chr3_2:9626626-9626645 | Msa0394610:intron | 35.0% |
| ! | GTTTTCCAGGTGTTTTTCAT+GGG | + | chr3_2:9626627-9626646 | Msa0394610:intron | 35.0% |
| !!! | TTTTTCATGGGCTTTGTTCA+TGG | + | chr3_2:9626639-9626658 | Msa0394610:intron | 35.0% |
| ! | GTCAAATCACATTTTACAGC+TGG | + | chr3_2:9626878-9626897 | Msa0394610:CDS | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr3_2:9626926-9626945 | Msa0394610:CDS | 35.0% |
| TAAAGAATCGAACAAGTGAG+TGG | - | chr3_2:9626967-9626986 | None:intergenic | 35.0% | |
| ACATTATGGTTCAGAGAATG+AGG | + | chr3_2:9626996-9627015 | Msa0394610:intron | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr3_2:9626997-9627016 | Msa0394610:intron | 35.0% | |
| CTTGCTTTGCATTTATTCAC+AGG | + | chr3_2:9627122-9627141 | Msa0394610:CDS | 35.0% | |
| ! | ATGATGATGCTGATAATGAC+GGG | + | chr3_2:9627251-9627270 | Msa0394610:CDS | 35.0% |
| TCCAAAACATCAACATTCGA+AGG | - | chr3_2:9627277-9627296 | None:intergenic | 35.0% | |
| CGATCATGAACTTCAAAACT+TGG | - | chr3_2:9627325-9627344 | None:intergenic | 35.0% | |
| ATGTCGTATGTTTGAGAACA+AGG | + | chr3_2:9627399-9627418 | Msa0394610:CDS | 35.0% | |
| TGTCGTATGTTTGAGAACAA+GGG | + | chr3_2:9627400-9627419 | Msa0394610:CDS | 35.0% | |
| !!! | TCGACATGTTTTGAAGATCT+TGG | + | chr3_2:9627432-9627451 | Msa0394610:intron | 35.0% |
| TTGAAGATCTTGGAGTTCTT+AGG | + | chr3_2:9627442-9627461 | Msa0394610:intron | 35.0% | |
| ! | CATTCTTTGAAGACAATACC+TGG | + | chr3_2:9627481-9627500 | Msa0394610:CDS | 35.0% |
| !! | CGCTTTAAAACATATTGTCC+AGG | - | chr3_2:9627502-9627521 | None:intergenic | 35.0% |
| GAGAAGTTGCTTCTTTCTAA+AGG | + | chr3_2:9627715-9627734 | Msa0394610:CDS | 35.0% | |
| !! | CTTTCTAAAGGTATTCGTAC+AGG | + | chr3_2:9627727-9627746 | Msa0394610:CDS | 35.0% |
| !!! | GCTACTTTTGAAGACTTAGA+TGG | - | chr3_2:9627760-9627779 | None:intergenic | 35.0% |
| TCTTTCTTTGAACTTTGGTG+CGG | - | chr3_2:9627818-9627837 | None:intergenic | 35.0% | |
| CCCCTAGCAATAAAGAATCA+TGG | + | chr3_2:9620459-9620478 | Msa0394610:CDS | 40.0% | |
| ! | CAGTACATTTTGAACTGCCT+AGG | + | chr3_2:9621337-9621356 | Msa0394610:intron | 40.0% |
| ! | ATTTTCTCGCTTCTGCCATT+TGG | + | chr3_2:9621420-9621439 | Msa0394610:intron | 40.0% |
| TCACACAAGACAAAATGCCT+AGG | - | chr3_2:9621494-9621513 | None:intergenic | 40.0% | |
| !!! | AGACAGCAGCTACTTTTGAT+TGG | + | chr3_2:9621816-9621835 | Msa0394610:intron | 40.0% |
| AAGGAAAAAAGGCTTGCACA+TGG | + | chr3_2:9622297-9622316 | Msa0394610:intron | 40.0% | |
| CGACAACGACATAACTCTAT+CGG | + | chr3_2:9622370-9622389 | Msa0394610:intron | 40.0% | |
| ATGAGAGGACTTAGGATCAA+GGG | + | chr3_2:9622756-9622775 | Msa0394610:intron | 40.0% | |
| GGACTGTTTCAACTTCTACT+CGG | - | chr3_2:9623009-9623028 | None:intergenic | 40.0% | |
| TGATAGACAGGTTAGTAGAC+AGG | + | chr3_2:9623289-9623308 | Msa0394610:intron | 40.0% | |
| CAATCTCCTCTGTGTCATAA+AGG | - | chr3_2:9623320-9623339 | None:intergenic | 40.0% | |
| ATCAGGGTAAAGATTGCGAA+GGG | + | chr3_2:9623439-9623458 | Msa0394610:intron | 40.0% | |
| TTCAGTGTGGTGATCTTGTT+GGG | + | chr3_2:9623559-9623578 | Msa0394610:intron | 40.0% | |
| TGGAAGAAAATGCACAAGTG+AGG | + | chr3_2:9623640-9623659 | Msa0394610:intron | 40.0% | |
| GAATAGATGTACCCTTGCAA+AGG | - | chr3_2:9623717-9623736 | None:intergenic | 40.0% | |
| !! | AAAAGAAAGCGTTTGATGGG+AGG | + | chr3_2:9623915-9623934 | Msa0394610:intron | 40.0% |
| ! | CACTCCTCCTTTTGAACTTT+TGG | - | chr3_2:9624234-9624253 | None:intergenic | 40.0% |
| ! | AGGAGTGACTTGTGTTTCAA+AGG | + | chr3_2:9624247-9624266 | Msa0394610:intron | 40.0% |
| TGTTTCAAAGGCGAAGTGTA+CGG | + | chr3_2:9624259-9624278 | Msa0394610:intron | 40.0% | |
| AGTGTACGGCAGTTAAAGAT+AGG | + | chr3_2:9624273-9624292 | Msa0394610:intron | 40.0% | |
| TCTTTGTCATTAGCACACTG+AGG | + | chr3_2:9624424-9624443 | Msa0394610:intron | 40.0% | |
| AAATCAGGGTAGGCTTCAAA+AGG | - | chr3_2:9624472-9624491 | None:intergenic | 40.0% | |
| GGCTCAATTTGGCTAAGAAA+AGG | - | chr3_2:9624512-9624531 | None:intergenic | 40.0% | |
| ! | CAACCAATTAAGTTTGGGGT+GGG | + | chr3_2:9624672-9624691 | Msa0394610:intron | 40.0% |
| ! | AACCAATTAAGTTTGGGGTG+GGG | + | chr3_2:9624673-9624692 | Msa0394610:intron | 40.0% |
| GGTGAAGGTGGGATAATATT+TGG | - | chr3_2:9624970-9624989 | None:intergenic | 40.0% | |
| ! | GGTCTTTAAGGGTTATAACG+GGG | - | chr3_2:9624997-9625016 | None:intergenic | 40.0% |
| !! | GCACACTTTGAGGTCTTTAA+GGG | - | chr3_2:9625008-9625027 | None:intergenic | 40.0% |
| !! | TGCACACTTTGAGGTCTTTA+AGG | - | chr3_2:9625009-9625028 | None:intergenic | 40.0% |
| CAATGTCAATGCACACTTTG+AGG | - | chr3_2:9625018-9625037 | None:intergenic | 40.0% | |
| ! | TTTTGCGTGGAGTTGTGAAT+TGG | + | chr3_2:9625120-9625139 | Msa0394610:intron | 40.0% |
| !!! | CACTTTTAGCTTGTAAGGAG+AGG | + | chr3_2:9625168-9625187 | Msa0394610:intron | 40.0% |
| ! | CTTGTAAGGAGAGGAACTTT+TGG | + | chr3_2:9625177-9625196 | Msa0394610:intron | 40.0% |
| ! | GGCAAGTAACAGTTCAAGTT+TGG | + | chr3_2:9625269-9625288 | Msa0394610:intron | 40.0% |
| AAGGAAAAAAGGCTTGCACA+TGG | + | chr3_2:9622297-9622316 | Msa0394610:intron | 40.0% | |
| CGACAACGACATAACTCTAT+CGG | + | chr3_2:9622370-9622389 | Msa0394610:intron | 40.0% | |
| ATGAGAGGACTTAGGATCAA+GGG | + | chr3_2:9622756-9622775 | Msa0394610:intron | 40.0% | |
| GGACTGTTTCAACTTCTACT+CGG | - | chr3_2:9623009-9623028 | None:intergenic | 40.0% | |
| GCATACGATTTGCGTAAGTT+TGG | - | chr3_2:9626841-9626860 | None:intergenic | 40.0% | |
| CTTACGCAAATCGTATGCAT+TGG | + | chr3_2:9626843-9626862 | Msa0394610:CDS | 40.0% | |
| !! | TATGCATTGGTCTTCAGCTT+GGG | + | chr3_2:9626856-9626875 | Msa0394610:CDS | 40.0% |
| ! | TCATGCTGAGTTGGACTTTA+AGG | + | chr3_2:9627024-9627043 | Msa0394610:CDS | 40.0% |
| ! | AGGGGTGTACTTGTTTACAA+CGG | - | chr3_2:9627101-9627120 | None:intergenic | 40.0% |
| TATGAGGAGGACACAACAAA+AGG | + | chr3_2:9627172-9627191 | Msa0394610:CDS | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr3_2:9627173-9627192 | Msa0394610:CDS | 40.0% | |
| ! | GCCTTCGAATGTTGATGTTT+TGG | + | chr3_2:9627273-9627292 | Msa0394610:CDS | 40.0% |
| AAGATCTTGGAGTTCTTAGG+TGG | + | chr3_2:9627445-9627464 | Msa0394610:intron | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | chr3_2:9627544-9627563 | None:intergenic | 40.0% | |
| CTGAAATCGACTGTCAATGT+TGG | + | chr3_2:9627556-9627575 | Msa0394610:CDS | 40.0% | |
| TTGATATCGTTGTGCTTGAC+TGG | - | chr3_2:9627593-9627612 | None:intergenic | 40.0% | |
| CGTTCTTGAAGCTGGAAAAA+AGG | + | chr3_2:9627690-9627709 | Msa0394610:CDS | 40.0% | |
| TTTGAAGACTTAGATGGCGT+CGG | - | chr3_2:9627754-9627773 | None:intergenic | 40.0% | |
| TCTTCAAAAGTAGCTGCTGT+TGG | + | chr3_2:9627766-9627785 | Msa0394610:CDS | 40.0% | |
| !! | TCACTGATTCATGCTGAGAG+TGG | + | chr3_2:9620380-9620399 | Msa0394610:CDS | 45.0% |
| GAAAAACCTGAGGAAAGGGT+TGG | + | chr3_2:9620728-9620747 | Msa0394610:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+AGG | - | chr3_2:9620737-9620756 | None:intergenic | 45.0% | |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr3_2:9620740-9620759 | Msa0394610:CDS | 45.0% |
| CTAAGGTAACGCGAATGCTT+TGG | - | chr3_2:9620848-9620867 | None:intergenic | 45.0% | |
| GAAGTTATGGGTCAAGGAGT+TGG | + | chr3_2:9620950-9620969 | Msa0394610:CDS | 45.0% | |
| ! | GCACGGAGAATCTTCCTTTT+CGG | + | chr3_2:9620975-9620994 | Msa0394610:CDS | 45.0% |
| ! | CGTCAAAAAGAGATGGTGGT+TGG | + | chr3_2:9621031-9621050 | Msa0394610:CDS | 45.0% |
| TGTCTCATCGTACAATAGCG+CGG | - | chr3_2:9621801-9621820 | None:intergenic | 45.0% | |
| ACAAAGCCATGACACACACA+AGG | + | chr3_2:9622179-9622198 | Msa0394610:intron | 45.0% | |
| CTACGGGAGAGAAGGAAAAA+AGG | + | chr3_2:9622286-9622305 | Msa0394610:intron | 45.0% | |
| ACTGACACTAGCGTGTATCT+CGG | + | chr3_2:9622601-9622620 | Msa0394610:intron | 45.0% | |
| ! | TCTAACGGACAATCTAGGGA+TGG | + | chr3_2:9622643-9622662 | Msa0394610:intron | 45.0% |
| GATGAGAGGACTTAGGATCA+AGG | + | chr3_2:9622755-9622774 | Msa0394610:intron | 45.0% | |
| CAAACCAAACCAACTGCCTA+GGG | + | chr3_2:9622943-9622962 | Msa0394610:intron | 45.0% | |
| ATGTAAATAGGGGTTGCCCT+AGG | - | chr3_2:9622962-9622981 | None:intergenic | 45.0% | |
| AGAAGTTGAAACAGTCCCTG+TGG | + | chr3_2:9623012-9623031 | Msa0394610:intron | 45.0% | |
| GTTACGCCTTTATGACACAG+AGG | + | chr3_2:9623311-9623330 | Msa0394610:intron | 45.0% | |
| CACAGAGGAGATTGTTACGT+TGG | + | chr3_2:9623326-9623345 | Msa0394610:intron | 45.0% | |
| TGATCATGAGGCGAATCATC+AGG | + | chr3_2:9623422-9623441 | Msa0394610:intron | 45.0% | |
| GATCATGAGGCGAATCATCA+GGG | + | chr3_2:9623423-9623442 | Msa0394610:intron | 45.0% | |
| CATCAGGGTAAAGATTGCGA+AGG | + | chr3_2:9623438-9623457 | Msa0394610:intron | 45.0% | |
| GTTCAGTGTGGTGATCTTGT+TGG | + | chr3_2:9623558-9623577 | Msa0394610:intron | 45.0% | |
| GAATGAATGTGAGAAGCAGC+TGG | + | chr3_2:9623587-9623606 | Msa0394610:intron | 45.0% | |
| ! | AATGCACAAGTGAGGAGTGT+TGG | + | chr3_2:9623648-9623667 | Msa0394610:intron | 45.0% |
| CTACCTGAAGTCTCAACCAA+CGG | + | chr3_2:9623674-9623693 | Msa0394610:intron | 45.0% | |
| TACCTGAAGTCTCAACCAAC+GGG | + | chr3_2:9623675-9623694 | Msa0394610:intron | 45.0% | |
| ATGGTTTCTTTCAACCCCGT+TGG | - | chr3_2:9623693-9623712 | None:intergenic | 45.0% | |
| GATGTACCCTTGCAAAGGAA+TGG | - | chr3_2:9623712-9623731 | None:intergenic | 45.0% | |
| CATATTTGCCACCCTAACAG+TGG | + | chr3_2:9623868-9623887 | Msa0394610:intron | 45.0% | |
| TGACGCTTCAACCACTGTTA+GGG | - | chr3_2:9623882-9623901 | None:intergenic | 45.0% | |
| TTGACGCTTCAACCACTGTT+AGG | - | chr3_2:9623883-9623902 | None:intergenic | 45.0% | |
| !! | CTAAACCTACCGGCTCAATT+TGG | - | chr3_2:9624523-9624542 | None:intergenic | 45.0% |
| CCACCCCAAACTTAATTGGT+TGG | - | chr3_2:9624674-9624693 | None:intergenic | 45.0% | |
| CCAACCAATTAAGTTTGGGG+TGG | + | chr3_2:9624671-9624690 | Msa0394610:intron | 45.0% | |
| ! | ACCAATTAAGTTTGGGGTGG+GGG | + | chr3_2:9624674-9624693 | Msa0394610:intron | 45.0% |
| ! | TTATAACGGGGCTTAGGTGA+AGG | - | chr3_2:9624985-9625004 | None:intergenic | 45.0% |
| ! | TAAGGGTTATAACGGGGCTT+AGG | - | chr3_2:9624991-9625010 | None:intergenic | 45.0% |
| TTGGGTACTACTGCTTGATC+AGG | + | chr3_2:9625196-9625215 | Msa0394610:intron | 45.0% | |
| ! | TGAACTGTTACTTGCCCTCA+AGG | - | chr3_2:9625265-9625284 | None:intergenic | 45.0% |
| ACAAAGCCATGACACACACA+AGG | + | chr3_2:9622179-9622198 | Msa0394610:intron | 45.0% | |
| CTACGGGAGAGAAGGAAAAA+AGG | + | chr3_2:9622286-9622305 | Msa0394610:intron | 45.0% | |
| ACTGACACTAGCGTGTATCT+CGG | + | chr3_2:9622601-9622620 | Msa0394610:intron | 45.0% | |
| ! | TCTAACGGACAATCTAGGGA+TGG | + | chr3_2:9622643-9622662 | Msa0394610:intron | 45.0% |
| GATGAGAGGACTTAGGATCA+AGG | + | chr3_2:9622755-9622774 | Msa0394610:intron | 45.0% | |
| CAAACCAAACCAACTGCCTA+GGG | + | chr3_2:9622943-9622962 | Msa0394610:intron | 45.0% | |
| ATGTAAATAGGGGTTGCCCT+AGG | - | chr3_2:9622962-9622981 | None:intergenic | 45.0% | |
| AGAAGTTGAAACAGTCCCTG+TGG | + | chr3_2:9623012-9623031 | Msa0394610:intron | 45.0% | |
| AACACAATAACGCACTAGCC+TGG | - | chr3_2:9626595-9626614 | None:intergenic | 45.0% | |
| CAAAGCCCATGAAAAACACC+TGG | - | chr3_2:9626635-9626654 | None:intergenic | 45.0% | |
| !! | GTATGCATTGGTCTTCAGCT+TGG | + | chr3_2:9626855-9626874 | Msa0394610:CDS | 45.0% |
| AATCGAACAAGTGAGTGGTC+TGG | - | chr3_2:9626962-9626981 | None:intergenic | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | + | chr3_2:9627015-9627034 | Msa0394610:CDS | 45.0% | |
| TTGAAGACTTAGATGGCGTC+GGG | - | chr3_2:9627753-9627772 | None:intergenic | 45.0% | |
| ! | CTGTTGGTGAAACATCTGCT+GGG | + | chr3_2:9627782-9627801 | Msa0394610:CDS | 45.0% |
| ! | TGTTGGTGAAACATCTGCTG+GGG | + | chr3_2:9627783-9627802 | Msa0394610:CDS | 45.0% |
| ! | TCTTTGAACTTTGGTGCGGT+GGG | - | chr3_2:9627814-9627833 | None:intergenic | 45.0% |
| ! | TTCTTTGAACTTTGGTGCGG+TGG | - | chr3_2:9627815-9627834 | None:intergenic | 45.0% |
| !! | AATTTACAATATTATAAAAA+AGG | + | chr3_2:9622127-9622146 | Msa0394610:intron | 5.0% |
| !! | AAAAAAACATTAAAAAAAAA+AGG | - | chr3_2:9623949-9623968 | None:intergenic | 5.0% |
| !! | AATTTACAATATTATAAAAA+AGG | + | chr3_2:9622127-9622146 | Msa0394610:intron | 5.0% |
| ! | TCTGCTGTTGGCCTGTTGTT+TGG | - | chr3_2:9620674-9620693 | None:intergenic | 50.0% |
| GTTATGGGTCAAGGAGTTGG+AGG | + | chr3_2:9620953-9620972 | Msa0394610:CDS | 50.0% | |
| GGCATGGAAAGAACAAGCTG+AGG | + | chr3_2:9622070-9622089 | Msa0394610:intron | 50.0% | |
| AACAAGCTGAGGCACGTGAT+TGG | + | chr3_2:9622081-9622100 | Msa0394610:intron | 50.0% | |
| AACACGTGGCACTCTACAAG+TGG | + | chr3_2:9622150-9622169 | Msa0394610:intron | 50.0% | |
| GCAAACCAAACCAACTGCCT+AGG | + | chr3_2:9622942-9622961 | Msa0394610:intron | 50.0% | |
| AATTCAACAGTCCCCGGCAA+CGG | - | chr3_2:9623112-9623131 | None:intergenic | 50.0% | |
| TGAGAAGCAGCTGGTTGAGA+TGG | + | chr3_2:9623596-9623615 | Msa0394610:intron | 50.0% | |
| ACCTGAAGTCTCAACCAACG+GGG | + | chr3_2:9623676-9623695 | Msa0394610:intron | 50.0% | |
| !! | CACACTGAGGCAAAAGTGCT+TGG | + | chr3_2:9624437-9624456 | Msa0394610:intron | 50.0% |
| GTAGGCTTCAAAAGGCTCAC+AGG | - | chr3_2:9624464-9624483 | None:intergenic | 50.0% | |
| CTTAGCCAAATTGAGCCGGT+AGG | + | chr3_2:9624515-9624534 | Msa0394610:intron | 50.0% | |
| ACCCCCACCCCAAACTTAAT+TGG | - | chr3_2:9624678-9624697 | None:intergenic | 50.0% | |
| TGCGTGGAGTTGTGAATTGG+TGG | + | chr3_2:9625123-9625142 | Msa0394610:intron | 50.0% | |
| GCGTGGAGTTGTGAATTGGT+GGG | + | chr3_2:9625124-9625143 | Msa0394610:intron | 50.0% | |
| GGCATGGAAAGAACAAGCTG+AGG | + | chr3_2:9622070-9622089 | Msa0394610:intron | 50.0% | |
| AACAAGCTGAGGCACGTGAT+TGG | + | chr3_2:9622081-9622100 | Msa0394610:intron | 50.0% | |
| AACACGTGGCACTCTACAAG+TGG | + | chr3_2:9622150-9622169 | Msa0394610:intron | 50.0% | |
| GCAAACCAAACCAACTGCCT+AGG | + | chr3_2:9622942-9622961 | Msa0394610:intron | 50.0% | |
| !! | TGGGCTTTGTTCATGGCACA+TGG | + | chr3_2:9626646-9626665 | Msa0394610:intron | 50.0% |
| GAAGGCCTACCTCAGACTTT+AGG | + | chr3_2:9626807-9626826 | Msa0394610:CDS | 50.0% | |
| ! | AGCCACCTAAAGTCTGAGGT+AGG | - | chr3_2:9626815-9626834 | None:intergenic | 50.0% |
| GACAAGCCACCTAAAGTCTG+AGG | - | chr3_2:9626819-9626838 | None:intergenic | 50.0% | |
| ATCCCAACAGTCAGCTGATG+CGG | + | chr3_2:9627074-9627093 | Msa0394610:CDS | 50.0% | |
| ! | GCTGTTGGTGAAACATCTGC+TGG | + | chr3_2:9627781-9627800 | Msa0394610:CDS | 50.0% |
| !! | ACCAGTGGACTGTCTGCTGT+TGG | - | chr3_2:9620686-9620705 | None:intergenic | 55.0% |
| ACGTGGCACTCTACAAGTGG+TGG | + | chr3_2:9622153-9622172 | Msa0394610:intron | 55.0% | |
| AAGGAGCCGCATTCACGCTA+CGG | + | chr3_2:9622269-9622288 | Msa0394610:intron | 55.0% | |
| TCTCTCCCGTAGCGTGAATG+CGG | - | chr3_2:9622278-9622297 | None:intergenic | 55.0% | |
| CATTCACGCTACGGGAGAGA+AGG | + | chr3_2:9622278-9622297 | Msa0394610:intron | 55.0% | |
| GTTGCCCTAGGCAGTTGGTT+TGG | - | chr3_2:9622950-9622969 | None:intergenic | 55.0% | |
| !!! | CAAGTTTTTGGCGCCGTTGC+CGG | + | chr3_2:9623096-9623115 | Msa0394610:intron | 55.0% |
| !!! | AAGTTTTTGGCGCCGTTGCC+GGG | + | chr3_2:9623097-9623116 | Msa0394610:intron | 55.0% |
| ! | GGAGACTGAGTGTCGTCTTG+TGG | + | chr3_2:9623617-9623636 | Msa0394610:intron | 55.0% |
| ! | GACTGAGTGTCGTCTTGTGG+TGG | + | chr3_2:9623620-9623639 | Msa0394610:intron | 55.0% |
| ! | ACCCCGTTGGTTGAGACTTC+AGG | - | chr3_2:9623680-9623699 | None:intergenic | 55.0% |
| CGCTTCAACCACTGTTAGGG+TGG | - | chr3_2:9623879-9623898 | None:intergenic | 55.0% | |
| AACGGGGCTTAGGTGAAGGT+GGG | - | chr3_2:9624981-9625000 | None:intergenic | 55.0% | |
| TAACGGGGCTTAGGTGAAGG+TGG | - | chr3_2:9624982-9625001 | None:intergenic | 55.0% | |
| ACGTGGCACTCTACAAGTGG+TGG | + | chr3_2:9622153-9622172 | Msa0394610:intron | 55.0% | |
| AAGGAGCCGCATTCACGCTA+CGG | + | chr3_2:9622269-9622288 | Msa0394610:intron | 55.0% | |
| TCTCTCCCGTAGCGTGAATG+CGG | - | chr3_2:9622278-9622297 | None:intergenic | 55.0% | |
| CATTCACGCTACGGGAGAGA+AGG | + | chr3_2:9622278-9622297 | Msa0394610:intron | 55.0% | |
| GTTGCCCTAGGCAGTTGGTT+TGG | - | chr3_2:9622950-9622969 | None:intergenic | 55.0% | |
| GGCCTACCTCAGACTTTAGG+TGG | + | chr3_2:9626810-9626829 | Msa0394610:CDS | 55.0% | |
| GACCGCATCAGCTGACTGTT+GGG | - | chr3_2:9627079-9627098 | None:intergenic | 55.0% | |
| GCCAACAGCAGACAGTCCAC+TGG | + | chr3_2:9620682-9620701 | Msa0394610:CDS | 60.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr3_2:9620958-9620977 | Msa0394610:CDS | 60.0% | |
| AGGAGCCGCATTCACGCTAC+GGG | + | chr3_2:9622270-9622289 | Msa0394610:intron | 60.0% | |
| TAGGGGTTGCCCTAGGCAGT+TGG | - | chr3_2:9622955-9622974 | None:intergenic | 60.0% | |
| !!! | AGTTTTTGGCGCCGTTGCCG+GGG | + | chr3_2:9623098-9623117 | Msa0394610:intron | 60.0% |
| AGGAGCCGCATTCACGCTAC+GGG | + | chr3_2:9622270-9622289 | Msa0394610:intron | 60.0% | |
| TAGGGGTTGCCCTAGGCAGT+TGG | - | chr3_2:9622955-9622974 | None:intergenic | 60.0% | |
| GGACCGCATCAGCTGACTGT+TGG | - | chr3_2:9627080-9627099 | None:intergenic | 60.0% | |
| CTCGACGGCGTTCTTGAAGC+TGG | + | chr3_2:9627682-9627701 | Msa0394610:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 9620308 | 9627849 | 9620308 | ID=Msa0394610;Name=Msa0394610 |
| chr3_2 | mRNA | 9620308 | 9627849 | 9620308 | ID=Msa0394610-mRNA-1;Parent=Msa0394610;Name=Msa0394610-mRNA-1;_AED=0.08;_eAED=0.12;_QI=0|0|0|1|0|0|9|0|623 |
| chr3_2 | exon | 9620308 | 9620490 | 9620308 | ID=Msa0394610-mRNA-1:exon:2506;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9620575 | 9620795 | 9620575 | ID=Msa0394610-mRNA-1:exon:2507;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9620811 | 9621052 | 9620811 | ID=Msa0394610-mRNA-1:exon:2508;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9621059 | 9621256 | 9621059 | ID=Msa0394610-mRNA-1:exon:2509;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9626750 | 9626973 | 9626750 | ID=Msa0394610-mRNA-1:exon:2510;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9627010 | 9627219 | 9627010 | ID=Msa0394610-mRNA-1:exon:2511;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9627238 | 9627438 | 9627238 | ID=Msa0394610-mRNA-1:exon:2512;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9627448 | 9627646 | 9627448 | ID=Msa0394610-mRNA-1:exon:2513;Parent=Msa0394610-mRNA-1 |
| chr3_2 | exon | 9627659 | 9627849 | 9627659 | ID=Msa0394610-mRNA-1:exon:2514;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9620308 | 9620490 | 9620308 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9620575 | 9620795 | 9620575 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9620811 | 9621052 | 9620811 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9621059 | 9621256 | 9621059 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9626750 | 9626973 | 9626750 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9627010 | 9627219 | 9627010 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9627238 | 9627438 | 9627238 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9627448 | 9627646 | 9627448 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| chr3_2 | CDS | 9627659 | 9627849 | 9627659 | ID=Msa0394610-mRNA-1:cds;Parent=Msa0394610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
