AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0394680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0394680 MtrunA17_Chr3g0080341 96.894 322 10 0 7 328 1 322 0.0 647
Msa0394680 MtrunA17_Chr8g0355121 65.260 308 92 4 22 328 20 313 7.23e-138 393
Msa0394680 MtrunA17_Chr7g0254991 49.530 319 127 9 26 326 16 318 6.39e-84 256
Msa0394680 MtrunA17_Chr6g0460301 49.118 340 136 10 7 328 1 321 3.85e-80 246
Msa0394680 MtrunA17_Chr4g0044771 36.176 340 154 13 26 307 18 352 2.13e-42 150
Msa0394680 MtrunA17_Chr5g0440841 46.703 182 72 7 3 176 2 166 4.19e-35 128
Msa0394680 MtrunA17_Chr5g0440841 57.955 88 37 0 241 328 182 269 5.70e-23 96.3
Msa0394680 MtrunA17_Chr2g0321411 33.968 315 139 10 29 326 11 273 1.10e-33 125
Msa0394680 MtrunA17_Chr2g0321381 36.700 297 148 11 18 300 14 284 4.03e-28 110
Msa0394680 MtrunA17_Chr3g0133971 48.361 122 56 2 25 144 26 142 9.07e-27 109
Msa0394680 MtrunA17_Chr3g0133971 42.202 109 60 1 195 303 293 398 1.44e-17 83.2
Msa0394680 MtrunA17_Chr7g0266211 43.182 132 56 3 32 144 45 176 2.07e-20 91.3
Msa0394680 MtrunA17_Chr5g0424871 29.054 296 167 8 22 279 8 298 1.07e-19 87.8
Msa0394680 MtrunA17_Chr4g0051101 42.718 103 53 2 202 302 77 175 8.23e-14 69.3
Msa0394680 MtrunA17_Chr1g0201751 62.745 51 19 0 252 302 157 207 3.83e-12 65.5
Msa0394680 MtrunA17_Chr5g0405951 57.627 59 13 1 257 303 166 224 9.37e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0394680 AT3G56850.1 52.396 313 120 8 20 328 10 297 2.71e-88 267
Msa0394680 AT2G41070.4 48.418 316 101 10 16 328 15 271 5.04e-75 232
Msa0394680 AT2G41070.3 48.418 316 101 10 16 328 6 262 8.28e-75 231
Msa0394680 AT2G41070.1 48.418 316 101 10 16 328 6 262 8.28e-75 231
Msa0394680 AT2G41070.2 48.418 316 101 10 16 328 6 262 8.28e-75 231
Msa0394680 AT2G41070.5 47.931 290 89 10 16 302 6 236 4.35e-64 203
Msa0394680 AT1G49720.1 34.320 338 162 7 24 302 21 357 3.81e-45 158
Msa0394680 AT1G49720.3 34.320 338 162 7 24 302 21 357 3.81e-45 158
Msa0394680 AT1G49720.2 34.320 338 162 7 24 302 21 357 4.94e-45 158
Msa0394680 AT2G36270.1 32.346 405 169 13 18 321 30 430 5.62e-37 137
Msa0394680 AT2G36270.2 32.346 405 169 13 18 321 30 430 5.62e-37 137
Msa0394680 AT2G36270.3 32.976 373 155 12 18 299 30 398 2.56e-35 133
Msa0394680 AT3G44460.1 36.875 320 143 13 5 300 7 291 8.37e-30 116
Msa0394680 AT3G19290.2 43.046 151 65 3 15 144 21 171 2.92e-25 105
Msa0394680 AT3G19290.4 43.046 151 65 3 15 144 21 171 3.88e-25 105
Msa0394680 AT3G19290.4 37.857 140 64 4 184 302 260 397 5.74e-14 72.8
Msa0394680 AT3G19290.1 43.046 151 65 3 15 144 21 171 4.31e-25 105
Msa0394680 AT3G19290.1 37.857 140 64 4 184 302 260 397 7.50e-14 72.4
Msa0394680 AT3G19290.5 43.046 151 65 3 15 144 21 171 4.31e-25 105
Msa0394680 AT3G19290.5 37.857 140 64 4 184 302 260 397 7.50e-14 72.4
Msa0394680 AT3G19290.3 43.046 151 65 3 15 144 21 171 4.75e-25 105
Msa0394680 AT3G19290.3 37.857 140 64 4 184 302 260 397 7.73e-14 72.4
Msa0394680 AT5G42910.1 28.533 368 175 13 26 325 20 367 2.29e-23 99.4
Msa0394680 AT4G34000.3 34.715 193 77 6 25 177 26 209 8.29e-22 95.9
Msa0394680 AT4G34000.3 60.000 60 24 0 243 302 359 418 1.73e-15 77.4
Msa0394680 AT4G34000.1 34.197 193 78 5 25 177 26 209 9.48e-22 95.9
Msa0394680 AT4G34000.1 60.000 65 25 1 243 307 359 422 2.47e-15 77.0
Msa0394680 AT4G34000.4 34.197 193 78 5 25 177 26 209 9.48e-22 95.9
Msa0394680 AT4G34000.4 60.000 65 25 1 243 307 359 422 2.47e-15 77.0
Msa0394680 AT4G34000.2 34.197 193 78 5 25 177 26 209 9.48e-22 95.9
Msa0394680 AT4G34000.2 60.000 65 25 1 243 307 359 422 2.47e-15 77.0
Msa0394680 AT1G45249.10 41.791 134 60 3 26 144 21 151 2.43e-21 94.0
Msa0394680 AT1G45249.5 41.791 134 60 3 26 144 21 151 2.43e-21 94.0
Msa0394680 AT1G45249.4 41.791 134 60 3 26 144 21 151 4.14e-21 93.6
Msa0394680 AT1G45249.8 41.791 134 60 3 26 144 21 151 4.14e-21 93.6
Msa0394680 AT1G45249.2 41.791 134 60 3 26 144 21 151 4.14e-21 93.6
Msa0394680 AT1G45249.9 41.791 134 60 3 26 144 21 151 4.14e-21 93.6
Msa0394680 AT1G45249.7 41.791 134 60 3 26 144 36 166 4.42e-21 93.6
Msa0394680 AT1G45249.7 39.860 143 61 5 201 326 295 429 1.30e-17 83.6
Msa0394680 AT1G45249.6 41.791 134 60 3 26 144 36 166 4.42e-21 93.6
Msa0394680 AT1G45249.6 39.860 143 61 5 201 326 295 429 1.30e-17 83.6
Msa0394680 AT1G45249.1 41.791 134 60 3 26 144 21 151 5.03e-21 93.6
Msa0394680 AT1G45249.1 39.860 143 61 5 201 326 280 414 1.10e-17 83.6
Msa0394680 AT1G45249.3 41.791 134 60 3 26 144 21 151 6.03e-21 93.2
Msa0394680 AT1G45249.3 37.013 154 61 6 201 326 280 425 7.24e-15 75.5
Msa0394680 AT4G35900.1 51.163 86 40 2 243 328 202 285 1.90e-16 78.6
Msa0394680 AT2G17770.2 48.837 86 42 2 243 328 112 195 1.86e-14 71.2
Msa0394680 AT1G03970.1 31.373 204 84 6 102 303 85 234 3.23e-14 72.0
Msa0394680 AT5G44080.1 32.353 204 91 8 102 303 120 278 3.70e-14 72.4

Find 77 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCGACGAAGCTGGCATTT+AGG 0.252772 3_2:+9770544 None:intergenic
CTTGCCTAACATCGAAACTA+TGG 0.298577 3_2:-9772546 Msa0394680:CDS
AGAAGACGGTTGATGAAGTT+TGG 0.321664 3_2:-9772244 Msa0394680:CDS
GATTCAACAACACTGACTTT+AGG 0.341594 3_2:+9772071 None:intergenic
GACCCCATAGTTTCGATGTT+AGG 0.349341 3_2:+9772542 None:intergenic
TTTGGGTGAGATGACATTAG+AGG 0.364587 3_2:-9772162 Msa0394680:CDS
TCAACCGTCTTCTTGCTTAA+CGG 0.378968 3_2:+9772254 None:intergenic
ACGAAGCTGGCATTTAGGTT+CGG 0.387515 3_2:+9770549 None:intergenic
TCAAGAGATGCAGTCTACTT+TGG 0.394291 3_2:-9772180 Msa0394680:CDS
GCCACCTGACCATCTGTATA+CGG 0.395127 3_2:+9771888 None:intergenic
CGAAGCTGGCATTTAGGTTC+GGG 0.399153 3_2:+9770550 None:intergenic
GGTTAAAGCAGGCGTTGTTT+CGG 0.403853 3_2:-9772132 Msa0394680:CDS
CAACCTAATCTGTCGTTAAC+CGG 0.406252 3_2:-9772278 Msa0394680:CDS
CAAGAGATGCAGTCTACTTT+GGG 0.419918 3_2:-9772179 Msa0394680:CDS
CAGAATCACTTAGGTGACTT+AGG 0.427650 3_2:-9772425 Msa0394680:CDS
AGAAGAGGATGATTAAGAAT+CGG 0.435534 3_2:-9771767 Msa0394680:CDS
TCAAGGTTCATACTACTTAG+TGG 0.444599 3_2:+9772398 None:intergenic
CCAGAGGCTGGAATTGCGGT+TGG 0.448828 3_2:+9772489 None:intergenic
GAAGAGGATGATTAAGAATC+GGG 0.454965 3_2:-9771766 Msa0394680:CDS
GGAGATCAAAGTTTCGCGTC+TGG 0.466252 3_2:-9771587 Msa0394680:CDS
CAGTCATTGCACATGGCAGC+CGG 0.472274 3_2:-9771930 Msa0394680:CDS
CAAAGTTTCGCGTCTGGAAG+AGG 0.477899 3_2:-9771581 Msa0394680:CDS
CGCGCCAGAGGCTGGAATTG+CGG 0.479085 3_2:+9772485 None:intergenic
GGACCGGTTAACGACAGATT+AGG 0.482657 3_2:+9772275 None:intergenic
GCGCTCAAGAGCAAGGAAAC+AGG 0.483729 3_2:-9771733 Msa0394680:intron
CATGGCAGCCGGTGCTCCAT+CGG 0.496616 3_2:-9771919 Msa0394680:CDS
CCAACCGCAATTCCAGCCTC+TGG 0.504611 3_2:-9772489 Msa0394680:CDS
GATGAAGTTCAGAATCACTT+AGG 0.504785 3_2:-9772434 Msa0394680:CDS
TCTGAACTTCATCAAGGGTA+AGG 0.505070 3_2:+9772444 None:intergenic
GTCCTCTCAATCATGTCCTC+CGG 0.505376 3_2:+9771804 None:intergenic
ATCTGCGAGAAAGCGGGGAC+CGG 0.507079 3_2:-9771823 Msa0394680:CDS
CGTCTTCTTGCTTAACGGAC+CGG 0.507684 3_2:+9772259 None:intergenic
TGGCATTTAGGTTCGGGTGG+TGG 0.513608 3_2:+9770556 None:intergenic
TCAGATAAGTTTCCTACCAC+TGG 0.525861 3_2:+9771855 None:intergenic
TTGCCTAACATCGAAACTAT+GGG 0.527577 3_2:-9772545 Msa0394680:CDS
GACTGAGCTATGATCTGGCT+CGG 0.527606 3_2:+9771948 None:intergenic
CTGTTGAGAGGAAGCAGAAG+AGG 0.527853 3_2:-9771782 Msa0394680:CDS
TACAGATGGTCAGGTGGCGT+TGG 0.529554 3_2:-9771883 Msa0394680:CDS
ACAGAAATCTGCGAGAAAGC+GGG 0.534375 3_2:-9771829 Msa0394680:CDS
AACGAGGACACAGCGCAAGC+CGG 0.540740 3_2:-9772320 Msa0394680:CDS
AGTGATTCTGAACTTCATCA+AGG 0.543380 3_2:+9772438 None:intergenic
AACGCCGTCCGATGGAGCAC+CGG 0.546844 3_2:+9771911 None:intergenic
CTGCTGCGCGCTCAAGAGCA+AGG 0.547968 3_2:-9771740 Msa0394680:CDS
CGCAATTCCAGCCTCTGGCG+CGG 0.552340 3_2:-9772484 Msa0394680:CDS
CGTTCCGTATACAGATGGTC+AGG 0.553919 3_2:-9771892 Msa0394680:CDS
TGCTGTGGATGCTGATAGTG+TGG 0.563676 3_2:+9771993 None:intergenic
TTAGGCATACACAACTGAGT+TGG 0.564109 3_2:-9771608 Msa0394680:intron
TGCGAGAAAGCGGGGACCGG+AGG 0.566566 3_2:-9771820 Msa0394680:CDS
GGCAAACCAATCAATTCGCA+TGG 0.566719 3_2:-9772345 Msa0394680:CDS
CACAGAAATCTGCGAGAAAG+CGG 0.574514 3_2:-9771830 Msa0394680:CDS
GTATACGGAACGCCGTCCGA+TGG 0.577145 3_2:+9771903 None:intergenic
CTGATGATACGCGACGAAGC+TGG 0.577434 3_2:+9770536 None:intergenic
TGAAAAGCTGAGGAAAGAGA+AGG 0.578797 3_2:-9771554 Msa0394680:intron
GCAGCCGGTGCTCCATCGGA+CGG 0.579352 3_2:-9771915 Msa0394680:CDS
GCATCCACAGCAAAGTGTGA+TGG 0.583686 3_2:-9771982 Msa0394680:CDS
AGCTGGCATTTAGGTTCGGG+TGG 0.592805 3_2:+9770553 None:intergenic
GCAATGACTGAGCTATGATC+TGG 0.599628 3_2:+9771943 None:intergenic
TACTGTATCCACGGACCATG+TGG 0.602459 3_2:+9772023 None:intergenic
ACAACACTGACTTTAGGAGT+AGG 0.608724 3_2:+9772077 None:intergenic
ATCAATTCGCATGGAAAACG+AGG 0.609101 3_2:-9772336 Msa0394680:CDS
GTGATTCTGAACTTCATCAA+GGG 0.610620 3_2:+9772439 None:intergenic
CATAGCTCAGTCATTGCACA+TGG 0.615121 3_2:-9771937 Msa0394680:CDS
GACCGGAGGACATGATTGAG+AGG 0.620098 3_2:-9771806 Msa0394680:CDS
GCGTTGGCTTCACCAGTGGT+AGG 0.620523 3_2:-9771867 Msa0394680:CDS
GTCGCCATCACACTTTGCTG+TGG 0.628005 3_2:+9771978 None:intergenic
AAGAGGAAAATGAAAAGCTG+AGG 0.635284 3_2:-9771564 Msa0394680:CDS
GGTTGTGCATACTGTATCCA+CGG 0.641304 3_2:+9772014 None:intergenic
TGATTGAGAGGACTGTTGAG+AGG 0.642725 3_2:-9771794 Msa0394680:CDS
GGTGGCGTTGGCTTCACCAG+TGG 0.643645 3_2:-9771871 Msa0394680:CDS
CAGAAATCTGCGAGAAAGCG+GGG 0.644702 3_2:-9771828 Msa0394680:CDS
CCAACAAAACAACGATCATG+AGG 0.650306 3_2:-9772213 Msa0394680:CDS
GACGGCGTTCCGTATACAGA+TGG 0.652010 3_2:-9771897 Msa0394680:CDS
TCCGTATACAGATGGTCAGG+TGG 0.656234 3_2:-9771889 Msa0394680:CDS
CGGTCCGTTAAGCAAGAAGA+CGG 0.656636 3_2:-9772258 Msa0394680:CDS
ACAAAACAACGATCATGAGG+AGG 0.694318 3_2:-9772210 Msa0394680:CDS
TGCCTAACATCGAAACTATG+GGG 0.703016 3_2:-9772544 Msa0394680:CDS
GGACCATGTGGAGAAAACTG+TGG 0.769588 3_2:+9772035 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAACAAAAAGATTTTCAA+TGG + chr3_2:9771573-9771592 None:intergenic 15.0%
!! ATTTACATTCTTAATTCTTA+TGG - chr3_2:9771670-9771689 Msa0394680:intron 15.0%
!!! TTATTTTCTCAAATTATTAC+CGG - chr3_2:9772096-9772115 Msa0394680:CDS 15.0%
!! AATTTCAATATCTAAACATT+TGG - chr3_2:9772200-9772219 Msa0394680:CDS 15.0%
!!! ATTAACAAAAAGATTTTCAA+TGG + chr3_2:9771573-9771592 None:intergenic 15.0%
!! ATTTACATTCTTAATTCTTA+TGG - chr3_2:9771670-9771689 Msa0394680:intron 15.0%
!!! TTATTTTCTCAAATTATTAC+CGG - chr3_2:9772096-9772115 Msa0394680:CDS 15.0%
!! AATTTCAATATCTAAACATT+TGG - chr3_2:9772200-9772219 Msa0394680:CDS 15.0%
!! AAATTAGAACTTCAATAACA+TGG + chr3_2:9771390-9771409 None:intergenic 20.0%
!! TTTGCTTAAAAGTTATAGTT+TGG - chr3_2:9771545-9771564 Msa0394680:intron 20.0%
!! TACTTAATATCAAGAAACTA+AGG + chr3_2:9771611-9771630 None:intergenic 20.0%
!! TGAAATATCAGAATAATTCT+AGG + chr3_2:9771894-9771913 None:intergenic 20.0%
!! TATTCTGATATTTCATGTAT+TGG - chr3_2:9771899-9771918 Msa0394680:CDS 20.0%
!!! TACTTATTGACTGTTATTAT+TGG - chr3_2:9771959-9771978 Msa0394680:CDS 20.0%
!!! GAAATTTGAAATCAGTAAAT+TGG + chr3_2:9772186-9772205 None:intergenic 20.0%
!! TTGATTGTACTATATAAACA+AGG + chr3_2:9772243-9772262 None:intergenic 20.0%
!!! ATGCTACAAATTCAAATTTT+TGG - chr3_2:9772384-9772403 Msa0394680:CDS 20.0%
!!! ACAAATTCAAATTTTTGGAA+TGG - chr3_2:9772389-9772408 Msa0394680:CDS 20.0%
!! AAATTAGAACTTCAATAACA+TGG + chr3_2:9771390-9771409 None:intergenic 20.0%
!! TTTGCTTAAAAGTTATAGTT+TGG - chr3_2:9771545-9771564 Msa0394680:intron 20.0%
!! TACTTAATATCAAGAAACTA+AGG + chr3_2:9771611-9771630 None:intergenic 20.0%
!! TGAAATATCAGAATAATTCT+AGG + chr3_2:9771894-9771913 None:intergenic 20.0%
!! TATTCTGATATTTCATGTAT+TGG - chr3_2:9771899-9771918 Msa0394680:CDS 20.0%
!!! TACTTATTGACTGTTATTAT+TGG - chr3_2:9771959-9771978 Msa0394680:CDS 20.0%
!!! GAAATTTGAAATCAGTAAAT+TGG + chr3_2:9772186-9772205 None:intergenic 20.0%
!! TTGATTGTACTATATAAACA+AGG + chr3_2:9772243-9772262 None:intergenic 20.0%
!!! ATGCTACAAATTCAAATTTT+TGG - chr3_2:9772384-9772403 Msa0394680:CDS 20.0%
!!! ACAAATTCAAATTTTTGGAA+TGG - chr3_2:9772389-9772408 Msa0394680:CDS 20.0%
! ATGGAAAAAGTTGTTTACTT+GGG + chr3_2:9771427-9771446 None:intergenic 25.0%
! CTAATTACAGTTATAATCCA+TGG + chr3_2:9771446-9771465 None:intergenic 25.0%
!! CATGGATTATAACTGTAATT+AGG - chr3_2:9771444-9771463 Msa0394680:intron 25.0%
!! ATCTCAATTTAGTTTCTGTA+CGG - chr3_2:9771633-9771652 Msa0394680:intron 25.0%
! TTCTTAATTCTTATGGTGTT+TGG - chr3_2:9771677-9771696 Msa0394680:intron 25.0%
! TCTTAATTCTTATGGTGTTT+GGG - chr3_2:9771678-9771697 Msa0394680:intron 25.0%
!! TTACTGCTTAGAATTTTCTT+TGG - chr3_2:9771737-9771756 Msa0394680:CDS 25.0%
! AATGAGTAAAAAGATCATGA+AGG - chr3_2:9771933-9771952 Msa0394680:CDS 25.0%
! AATACATATGAAGGATTGAA+AGG + chr3_2:9771997-9772016 None:intergenic 25.0%
! GCAACAAGATTAATAAACAA+AGG + chr3_2:9772315-9772334 None:intergenic 25.0%
! ATGGAAAAAGTTGTTTACTT+GGG + chr3_2:9771427-9771446 None:intergenic 25.0%
! CTAATTACAGTTATAATCCA+TGG + chr3_2:9771446-9771465 None:intergenic 25.0%
!! CATGGATTATAACTGTAATT+AGG - chr3_2:9771444-9771463 Msa0394680:intron 25.0%
!! ATCTCAATTTAGTTTCTGTA+CGG - chr3_2:9771633-9771652 Msa0394680:intron 25.0%
! TTCTTAATTCTTATGGTGTT+TGG - chr3_2:9771677-9771696 Msa0394680:intron 25.0%
! TCTTAATTCTTATGGTGTTT+GGG - chr3_2:9771678-9771697 Msa0394680:intron 25.0%
!! TTACTGCTTAGAATTTTCTT+TGG - chr3_2:9771737-9771756 Msa0394680:CDS 25.0%
! AATGAGTAAAAAGATCATGA+AGG - chr3_2:9771933-9771952 Msa0394680:CDS 25.0%
! AATACATATGAAGGATTGAA+AGG + chr3_2:9771997-9772016 None:intergenic 25.0%
! GCAACAAGATTAATAAACAA+AGG + chr3_2:9772315-9772334 None:intergenic 25.0%
!!! GATGACATTAGAGGATTTTT+TGG - chr3_2:9770917-9770936 Msa0394680:intron 30.0%
AGAAGAGGATGATTAAGAAT+CGG - chr3_2:9771303-9771322 Msa0394680:intron 30.0%
CATGGAAAAAGTTGTTTACT+TGG + chr3_2:9771428-9771447 None:intergenic 30.0%
!! CAAGTAAACAACTTTTTCCA+TGG - chr3_2:9771426-9771445 Msa0394680:intron 30.0%
! CTGATATTTCATGTATTGGT+TGG - chr3_2:9771903-9771922 Msa0394680:CDS 30.0%
AGTGTCAGAAATACATATGA+AGG + chr3_2:9772006-9772025 None:intergenic 30.0%
TGATATTGACACATAAACAC+CGG + chr3_2:9772118-9772137 None:intergenic 30.0%
!!! TTGCATAGTGTTTTTTGAAG+AGG - chr3_2:9772331-9772350 Msa0394680:CDS 30.0%
! TTTTGCATTAAGCATTTGGA+TGG - chr3_2:9772356-9772375 Msa0394680:CDS 30.0%
TTGGAATGGATGTATCTTTA+TGG - chr3_2:9772403-9772422 Msa0394680:CDS 30.0%
!!! GATGACATTAGAGGATTTTT+TGG - chr3_2:9770917-9770936 Msa0394680:intron 30.0%
AGAAGAGGATGATTAAGAAT+CGG - chr3_2:9771303-9771322 Msa0394680:intron 30.0%
CATGGAAAAAGTTGTTTACT+TGG + chr3_2:9771428-9771447 None:intergenic 30.0%
!! CAAGTAAACAACTTTTTCCA+TGG - chr3_2:9771426-9771445 Msa0394680:intron 30.0%
! CTGATATTTCATGTATTGGT+TGG - chr3_2:9771903-9771922 Msa0394680:CDS 30.0%
AGTGTCAGAAATACATATGA+AGG + chr3_2:9772006-9772025 None:intergenic 30.0%
TGATATTGACACATAAACAC+CGG + chr3_2:9772118-9772137 None:intergenic 30.0%
!!! TTGCATAGTGTTTTTTGAAG+AGG - chr3_2:9772331-9772350 Msa0394680:CDS 30.0%
! TTTTGCATTAAGCATTTGGA+TGG - chr3_2:9772356-9772375 Msa0394680:CDS 30.0%
TTGGAATGGATGTATCTTTA+TGG - chr3_2:9772403-9772422 Msa0394680:CDS 30.0%
TTGCCTAACATCGAAACTAT+GGG - chr3_2:9770525-9770544 Msa0394680:CDS 35.0%
GTGATTCTGAACTTCATCAA+GGG + chr3_2:9770634-9770653 None:intergenic 35.0%
AGTGATTCTGAACTTCATCA+AGG + chr3_2:9770635-9770654 None:intergenic 35.0%
GATGAAGTTCAGAATCACTT+AGG - chr3_2:9770636-9770655 Msa0394680:intron 35.0%
TCAAGGTTCATACTACTTAG+TGG + chr3_2:9770675-9770694 None:intergenic 35.0%
! ACGAGCTTCTGAAAAATGTA+TGG - chr3_2:9770694-9770713 Msa0394680:intron 35.0%
! GAAAAATGTATGGACTGTTG+AGG - chr3_2:9770704-9770723 Msa0394680:intron 35.0%
ACGTTGAAAAACAACTTGTC+CGG + chr3_2:9770772-9770791 None:intergenic 35.0%
!!! GAGGATTTTTTGGTTAAAGC+AGG - chr3_2:9770927-9770946 Msa0394680:intron 35.0%
!! GATTCAACAACACTGACTTT+AGG + chr3_2:9771002-9771021 None:intergenic 35.0%
GAAGAGGATGATTAAGAATC+GGG - chr3_2:9771304-9771323 Msa0394680:intron 35.0%
AGTTGTTTACTTGGGAGAAA+CGG + chr3_2:9771419-9771438 None:intergenic 35.0%
AAGAGGAAAATGAAAAGCTG+AGG - chr3_2:9771506-9771525 Msa0394680:intron 35.0%
GAAATTGTGCACTTTGATGT+TGG - chr3_2:9771700-9771719 Msa0394680:intron 35.0%
GTAAAGGGTCACATATTCTA+TGG + chr3_2:9771763-9771782 None:intergenic 35.0%
AGTAAGCACAAGACAGTAAA+GGG + chr3_2:9771778-9771797 None:intergenic 35.0%
AAGTAAGCACAAGACAGTAA+AGG + chr3_2:9771779-9771798 None:intergenic 35.0%
!! ACTGTCTTGTGCTTACTTTT+AGG - chr3_2:9771781-9771800 Msa0394680:CDS 35.0%
! TTTCTGACACTTCAAGTTCA+AGG - chr3_2:9772015-9772034 Msa0394680:CDS 35.0%
TGTCAATATCATGTCAGTGT+CGG + chr3_2:9772053-9772072 None:intergenic 35.0%
! GGCATTTTGCATTAAGCATT+TGG - chr3_2:9772352-9772371 Msa0394680:CDS 35.0%
! GTTTTACATACTCAACTTGC+AGG - chr3_2:9772465-9772484 Msa0394680:CDS 35.0%
TTGCCTAACATCGAAACTAT+GGG - chr3_2:9770525-9770544 Msa0394680:CDS 35.0%
GTGATTCTGAACTTCATCAA+GGG + chr3_2:9770634-9770653 None:intergenic 35.0%
AGTGATTCTGAACTTCATCA+AGG + chr3_2:9770635-9770654 None:intergenic 35.0%
GATGAAGTTCAGAATCACTT+AGG - chr3_2:9770636-9770655 Msa0394680:intron 35.0%
TCAAGGTTCATACTACTTAG+TGG + chr3_2:9770675-9770694 None:intergenic 35.0%
! ACGAGCTTCTGAAAAATGTA+TGG - chr3_2:9770694-9770713 Msa0394680:intron 35.0%
! GAAAAATGTATGGACTGTTG+AGG - chr3_2:9770704-9770723 Msa0394680:intron 35.0%
ACGTTGAAAAACAACTTGTC+CGG + chr3_2:9770772-9770791 None:intergenic 35.0%
!!! GAGGATTTTTTGGTTAAAGC+AGG - chr3_2:9770927-9770946 Msa0394680:intron 35.0%
!! GATTCAACAACACTGACTTT+AGG + chr3_2:9771002-9771021 None:intergenic 35.0%
GAAGAGGATGATTAAGAATC+GGG - chr3_2:9771304-9771323 Msa0394680:intron 35.0%
AGTTGTTTACTTGGGAGAAA+CGG + chr3_2:9771419-9771438 None:intergenic 35.0%
AAGAGGAAAATGAAAAGCTG+AGG - chr3_2:9771506-9771525 Msa0394680:intron 35.0%
GAAATTGTGCACTTTGATGT+TGG - chr3_2:9771700-9771719 Msa0394680:intron 35.0%
GTAAAGGGTCACATATTCTA+TGG + chr3_2:9771763-9771782 None:intergenic 35.0%
AGTAAGCACAAGACAGTAAA+GGG + chr3_2:9771778-9771797 None:intergenic 35.0%
AAGTAAGCACAAGACAGTAA+AGG + chr3_2:9771779-9771798 None:intergenic 35.0%
!! ACTGTCTTGTGCTTACTTTT+AGG - chr3_2:9771781-9771800 Msa0394680:CDS 35.0%
! TTTCTGACACTTCAAGTTCA+AGG - chr3_2:9772015-9772034 Msa0394680:CDS 35.0%
TGTCAATATCATGTCAGTGT+CGG + chr3_2:9772053-9772072 None:intergenic 35.0%
! GGCATTTTGCATTAAGCATT+TGG - chr3_2:9772352-9772371 Msa0394680:CDS 35.0%
! GTTTTACATACTCAACTTGC+AGG - chr3_2:9772465-9772484 Msa0394680:CDS 35.0%
TGCCTAACATCGAAACTATG+GGG - chr3_2:9770526-9770545 Msa0394680:CDS 40.0%
TCTGAACTTCATCAAGGGTA+AGG + chr3_2:9770629-9770648 None:intergenic 40.0%
CAGAATCACTTAGGTGACTT+AGG - chr3_2:9770645-9770664 Msa0394680:intron 40.0%
!! CATTTTTCAGAAGCTCGTCA+AGG + chr3_2:9770692-9770711 None:intergenic 40.0%
! CGTTTTCCATGCGAATTGAT+TGG + chr3_2:9770734-9770753 None:intergenic 40.0%
ATCAATTCGCATGGAAAACG+AGG - chr3_2:9770734-9770753 Msa0394680:intron 40.0%
CAACCTAATCTGTCGTTAAC+CGG - chr3_2:9770792-9770811 Msa0394680:intron 40.0%
TCAACCGTCTTCTTGCTTAA+CGG + chr3_2:9770819-9770838 None:intergenic 40.0%
!! AGAAGACGGTTGATGAAGTT+TGG - chr3_2:9770826-9770845 Msa0394680:intron 40.0%
!! CCTCATGATCGTTGTTTTGT+TGG + chr3_2:9770860-9770879 None:intergenic 40.0%
CCAACAAAACAACGATCATG+AGG - chr3_2:9770857-9770876 Msa0394680:intron 40.0%
ACAAAACAACGATCATGAGG+AGG - chr3_2:9770860-9770879 Msa0394680:intron 40.0%
TCAAGAGATGCAGTCTACTT+TGG - chr3_2:9770890-9770909 Msa0394680:intron 40.0%
CAAGAGATGCAGTCTACTTT+GGG - chr3_2:9770891-9770910 Msa0394680:intron 40.0%
TTTGGGTGAGATGACATTAG+AGG - chr3_2:9770908-9770927 Msa0394680:intron 40.0%
!! ACAACACTGACTTTAGGAGT+AGG + chr3_2:9770996-9771015 None:intergenic 40.0%
TCAGATAAGTTTCCTACCAC+TGG + chr3_2:9771218-9771237 None:intergenic 40.0%
GTTGTTTACTTGGGAGAAAC+GGG + chr3_2:9771418-9771437 None:intergenic 40.0%
TTAGGCATACACAACTGAGT+TGG - chr3_2:9771462-9771481 Msa0394680:intron 40.0%
TGAAAAGCTGAGGAAAGAGA+AGG - chr3_2:9771516-9771535 Msa0394680:intron 40.0%
TGTCTCTGTCAACACTTCAT+AGG - chr3_2:9772144-9772163 Msa0394680:CDS 40.0%
TGCCTAACATCGAAACTATG+GGG - chr3_2:9770526-9770545 Msa0394680:CDS 40.0%
TCTGAACTTCATCAAGGGTA+AGG + chr3_2:9770629-9770648 None:intergenic 40.0%
CAGAATCACTTAGGTGACTT+AGG - chr3_2:9770645-9770664 Msa0394680:intron 40.0%
!! CATTTTTCAGAAGCTCGTCA+AGG + chr3_2:9770692-9770711 None:intergenic 40.0%
! CGTTTTCCATGCGAATTGAT+TGG + chr3_2:9770734-9770753 None:intergenic 40.0%
ATCAATTCGCATGGAAAACG+AGG - chr3_2:9770734-9770753 Msa0394680:intron 40.0%
CAACCTAATCTGTCGTTAAC+CGG - chr3_2:9770792-9770811 Msa0394680:intron 40.0%
TCAACCGTCTTCTTGCTTAA+CGG + chr3_2:9770819-9770838 None:intergenic 40.0%
!! AGAAGACGGTTGATGAAGTT+TGG - chr3_2:9770826-9770845 Msa0394680:intron 40.0%
!! CCTCATGATCGTTGTTTTGT+TGG + chr3_2:9770860-9770879 None:intergenic 40.0%
CCAACAAAACAACGATCATG+AGG - chr3_2:9770857-9770876 Msa0394680:intron 40.0%
ACAAAACAACGATCATGAGG+AGG - chr3_2:9770860-9770879 Msa0394680:intron 40.0%
TCAAGAGATGCAGTCTACTT+TGG - chr3_2:9770890-9770909 Msa0394680:intron 40.0%
CAAGAGATGCAGTCTACTTT+GGG - chr3_2:9770891-9770910 Msa0394680:intron 40.0%
TTTGGGTGAGATGACATTAG+AGG - chr3_2:9770908-9770927 Msa0394680:intron 40.0%
!! ACAACACTGACTTTAGGAGT+AGG + chr3_2:9770996-9771015 None:intergenic 40.0%
TCAGATAAGTTTCCTACCAC+TGG + chr3_2:9771218-9771237 None:intergenic 40.0%
GTTGTTTACTTGGGAGAAAC+GGG + chr3_2:9771418-9771437 None:intergenic 40.0%
TTAGGCATACACAACTGAGT+TGG - chr3_2:9771462-9771481 Msa0394680:intron 40.0%
TGAAAAGCTGAGGAAAGAGA+AGG - chr3_2:9771516-9771535 Msa0394680:intron 40.0%
TGTCTCTGTCAACACTTCAT+AGG - chr3_2:9772144-9772163 Msa0394680:CDS 40.0%
GACCCCATAGTTTCGATGTT+AGG + chr3_2:9770531-9770550 None:intergenic 45.0%
GGCAAACCAATCAATTCGCA+TGG - chr3_2:9770725-9770744 Msa0394680:intron 45.0%
! GGTTAAAGCAGGCGTTGTTT+CGG - chr3_2:9770938-9770957 Msa0394680:intron 45.0%
! TTGCCACAGTTTTCTCCACA+TGG - chr3_2:9771032-9771051 Msa0394680:intron 45.0%
GGTTGTGCATACTGTATCCA+CGG + chr3_2:9771059-9771078 None:intergenic 45.0%
GCAATGACTGAGCTATGATC+TGG + chr3_2:9771130-9771149 None:intergenic 45.0%
CATAGCTCAGTCATTGCACA+TGG - chr3_2:9771133-9771152 Msa0394680:intron 45.0%
CACAGAAATCTGCGAGAAAG+CGG - chr3_2:9771240-9771259 Msa0394680:intron 45.0%
ACAGAAATCTGCGAGAAAGC+GGG - chr3_2:9771241-9771260 Msa0394680:intron 45.0%
TGATTGAGAGGACTGTTGAG+AGG - chr3_2:9771276-9771295 Msa0394680:intron 45.0%
! CTTCAAGTTCAAGGCGTGTT+TGG - chr3_2:9772024-9772043 Msa0394680:CDS 45.0%
!! TGAAGTGTTGACAGAGACAC+AGG + chr3_2:9772143-9772162 None:intergenic 45.0%
! ACGAAGCTGGCATTTAGGTT+CGG + chr3_2:9772524-9772543 None:intergenic 45.0%
GACCCCATAGTTTCGATGTT+AGG + chr3_2:9770531-9770550 None:intergenic 45.0%
GGCAAACCAATCAATTCGCA+TGG - chr3_2:9770725-9770744 Msa0394680:intron 45.0%
! GGTTAAAGCAGGCGTTGTTT+CGG - chr3_2:9770938-9770957 Msa0394680:intron 45.0%
! TTGCCACAGTTTTCTCCACA+TGG - chr3_2:9771032-9771051 Msa0394680:intron 45.0%
GGTTGTGCATACTGTATCCA+CGG + chr3_2:9771059-9771078 None:intergenic 45.0%
GCAATGACTGAGCTATGATC+TGG + chr3_2:9771130-9771149 None:intergenic 45.0%
CATAGCTCAGTCATTGCACA+TGG - chr3_2:9771133-9771152 Msa0394680:intron 45.0%
CACAGAAATCTGCGAGAAAG+CGG - chr3_2:9771240-9771259 Msa0394680:intron 45.0%
ACAGAAATCTGCGAGAAAGC+GGG - chr3_2:9771241-9771260 Msa0394680:intron 45.0%
TGATTGAGAGGACTGTTGAG+AGG - chr3_2:9771276-9771295 Msa0394680:intron 45.0%
! CTTCAAGTTCAAGGCGTGTT+TGG - chr3_2:9772024-9772043 Msa0394680:CDS 45.0%
!! TGAAGTGTTGACAGAGACAC+AGG + chr3_2:9772143-9772162 None:intergenic 45.0%
! ACGAAGCTGGCATTTAGGTT+CGG + chr3_2:9772524-9772543 None:intergenic 45.0%
! ATTGAATTTTGCCGCGCCAG+AGG + chr3_2:9770600-9770619 None:intergenic 50.0%
GGACCGGTTAACGACAGATT+AGG + chr3_2:9770798-9770817 None:intergenic 50.0%
! CGTCTTCTTGCTTAACGGAC+CGG + chr3_2:9770814-9770833 None:intergenic 50.0%
CGGTCCGTTAAGCAAGAAGA+CGG - chr3_2:9770812-9770831 Msa0394680:intron 50.0%
GGACCATGTGGAGAAAACTG+TGG + chr3_2:9771038-9771057 None:intergenic 50.0%
! AGTTTTCTCCACATGGTCCG+TGG - chr3_2:9771039-9771058 Msa0394680:intron 50.0%
TACTGTATCCACGGACCATG+TGG + chr3_2:9771050-9771069 None:intergenic 50.0%
! TGCTGTGGATGCTGATAGTG+TGG + chr3_2:9771080-9771099 None:intergenic 50.0%
GCATCCACAGCAAAGTGTGA+TGG - chr3_2:9771088-9771107 Msa0394680:intron 50.0%
GACTGAGCTATGATCTGGCT+CGG + chr3_2:9771125-9771144 None:intergenic 50.0%
CGTTCCGTATACAGATGGTC+AGG - chr3_2:9771178-9771197 Msa0394680:intron 50.0%
TCCGTATACAGATGGTCAGG+TGG - chr3_2:9771181-9771200 Msa0394680:intron 50.0%
GCCACCTGACCATCTGTATA+CGG + chr3_2:9771185-9771204 None:intergenic 50.0%
CAGAAATCTGCGAGAAAGCG+GGG - chr3_2:9771242-9771261 Msa0394680:intron 50.0%
GTCCTCTCAATCATGTCCTC+CGG + chr3_2:9771269-9771288 None:intergenic 50.0%
CTGTTGAGAGGAAGCAGAAG+AGG - chr3_2:9771288-9771307 Msa0394680:intron 50.0%
GGAGATCAAAGTTTCGCGTC+TGG - chr3_2:9771483-9771502 Msa0394680:intron 50.0%
CAAAGTTTCGCGTCTGGAAG+AGG - chr3_2:9771489-9771508 Msa0394680:intron 50.0%
! CGAAGCTGGCATTTAGGTTC+GGG + chr3_2:9772523-9772542 None:intergenic 50.0%
! ATTGAATTTTGCCGCGCCAG+AGG + chr3_2:9770600-9770619 None:intergenic 50.0%
GGACCGGTTAACGACAGATT+AGG + chr3_2:9770798-9770817 None:intergenic 50.0%
! CGTCTTCTTGCTTAACGGAC+CGG + chr3_2:9770814-9770833 None:intergenic 50.0%
CGGTCCGTTAAGCAAGAAGA+CGG - chr3_2:9770812-9770831 Msa0394680:intron 50.0%
GGACCATGTGGAGAAAACTG+TGG + chr3_2:9771038-9771057 None:intergenic 50.0%
! AGTTTTCTCCACATGGTCCG+TGG - chr3_2:9771039-9771058 Msa0394680:intron 50.0%
TACTGTATCCACGGACCATG+TGG + chr3_2:9771050-9771069 None:intergenic 50.0%
! TGCTGTGGATGCTGATAGTG+TGG + chr3_2:9771080-9771099 None:intergenic 50.0%
GCATCCACAGCAAAGTGTGA+TGG - chr3_2:9771088-9771107 Msa0394680:intron 50.0%
GACTGAGCTATGATCTGGCT+CGG + chr3_2:9771125-9771144 None:intergenic 50.0%
CGTTCCGTATACAGATGGTC+AGG - chr3_2:9771178-9771197 Msa0394680:intron 50.0%
TCCGTATACAGATGGTCAGG+TGG - chr3_2:9771181-9771200 Msa0394680:intron 50.0%
GCCACCTGACCATCTGTATA+CGG + chr3_2:9771185-9771204 None:intergenic 50.0%
CAGAAATCTGCGAGAAAGCG+GGG - chr3_2:9771242-9771261 Msa0394680:intron 50.0%
GTCCTCTCAATCATGTCCTC+CGG + chr3_2:9771269-9771288 None:intergenic 50.0%
CTGTTGAGAGGAAGCAGAAG+AGG - chr3_2:9771288-9771307 Msa0394680:intron 50.0%
GGAGATCAAAGTTTCGCGTC+TGG - chr3_2:9771483-9771502 Msa0394680:intron 50.0%
CAAAGTTTCGCGTCTGGAAG+AGG - chr3_2:9771489-9771508 Msa0394680:intron 50.0%
! CGAAGCTGGCATTTAGGTTC+GGG + chr3_2:9772523-9772542 None:intergenic 50.0%
GTCGCCATCACACTTTGCTG+TGG + chr3_2:9771095-9771114 None:intergenic 55.0%
CAGTCATTGCACATGGCAGC+CGG - chr3_2:9771140-9771159 Msa0394680:intron 55.0%
GACGGCGTTCCGTATACAGA+TGG - chr3_2:9771173-9771192 Msa0394680:intron 55.0%
TACAGATGGTCAGGTGGCGT+TGG - chr3_2:9771187-9771206 Msa0394680:intron 55.0%
GACCGGAGGACATGATTGAG+AGG - chr3_2:9771264-9771283 Msa0394680:intron 55.0%
GCGCTCAAGAGCAAGGAAAC+AGG - chr3_2:9771337-9771356 Msa0394680:intron 55.0%
! TGGCATTTAGGTTCGGGTGG+TGG + chr3_2:9772517-9772536 None:intergenic 55.0%
! AGCTGGCATTTAGGTTCGGG+TGG + chr3_2:9772520-9772539 None:intergenic 55.0%
ACGCGACGAAGCTGGCATTT+AGG + chr3_2:9772529-9772548 None:intergenic 55.0%
CTGATGATACGCGACGAAGC+TGG + chr3_2:9772537-9772556 None:intergenic 55.0%
GTCGCCATCACACTTTGCTG+TGG + chr3_2:9771095-9771114 None:intergenic 55.0%
CAGTCATTGCACATGGCAGC+CGG - chr3_2:9771140-9771159 Msa0394680:intron 55.0%
GACGGCGTTCCGTATACAGA+TGG - chr3_2:9771173-9771192 Msa0394680:intron 55.0%
TACAGATGGTCAGGTGGCGT+TGG - chr3_2:9771187-9771206 Msa0394680:intron 55.0%
GACCGGAGGACATGATTGAG+AGG - chr3_2:9771264-9771283 Msa0394680:intron 55.0%
GCGCTCAAGAGCAAGGAAAC+AGG - chr3_2:9771337-9771356 Msa0394680:intron 55.0%
! TGGCATTTAGGTTCGGGTGG+TGG + chr3_2:9772517-9772536 None:intergenic 55.0%
! AGCTGGCATTTAGGTTCGGG+TGG + chr3_2:9772520-9772539 None:intergenic 55.0%
ACGCGACGAAGCTGGCATTT+AGG + chr3_2:9772529-9772548 None:intergenic 55.0%
CTGATGATACGCGACGAAGC+TGG + chr3_2:9772537-9772556 None:intergenic 55.0%
CCAGAGGCTGGAATTGCGGT+TGG + chr3_2:9770584-9770603 None:intergenic 60.0%
CCAACCGCAATTCCAGCCTC+TGG - chr3_2:9770581-9770600 Msa0394680:CDS 60.0%
! AATTTTGCCGCGCCAGAGGC+TGG + chr3_2:9770596-9770615 None:intergenic 60.0%
AACGAGGACACAGCGCAAGC+CGG - chr3_2:9770750-9770769 Msa0394680:intron 60.0%
GTATACGGAACGCCGTCCGA+TGG + chr3_2:9771170-9771189 None:intergenic 60.0%
!! GCGTTGGCTTCACCAGTGGT+AGG - chr3_2:9771203-9771222 Msa0394680:intron 60.0%
ATCTGCGAGAAAGCGGGGAC+CGG - chr3_2:9771247-9771266 Msa0394680:intron 60.0%
CCAGAGGCTGGAATTGCGGT+TGG + chr3_2:9770584-9770603 None:intergenic 60.0%
CCAACCGCAATTCCAGCCTC+TGG - chr3_2:9770581-9770600 Msa0394680:CDS 60.0%
! AATTTTGCCGCGCCAGAGGC+TGG + chr3_2:9770596-9770615 None:intergenic 60.0%
AACGAGGACACAGCGCAAGC+CGG - chr3_2:9770750-9770769 Msa0394680:intron 60.0%
GTATACGGAACGCCGTCCGA+TGG + chr3_2:9771170-9771189 None:intergenic 60.0%
!! GCGTTGGCTTCACCAGTGGT+AGG - chr3_2:9771203-9771222 Msa0394680:intron 60.0%
ATCTGCGAGAAAGCGGGGAC+CGG - chr3_2:9771247-9771266 Msa0394680:intron 60.0%
CGCGCCAGAGGCTGGAATTG+CGG + chr3_2:9770588-9770607 None:intergenic 65.0%
CGCAATTCCAGCCTCTGGCG+CGG - chr3_2:9770586-9770605 Msa0394680:CDS 65.0%
CATGGCAGCCGGTGCTCCAT+CGG - chr3_2:9771151-9771170 Msa0394680:intron 65.0%
AACGCCGTCCGATGGAGCAC+CGG + chr3_2:9771162-9771181 None:intergenic 65.0%
!! GGTGGCGTTGGCTTCACCAG+TGG - chr3_2:9771199-9771218 Msa0394680:intron 65.0%
CTGCTGCGCGCTCAAGAGCA+AGG - chr3_2:9771330-9771349 Msa0394680:intron 65.0%
CGCGCCAGAGGCTGGAATTG+CGG + chr3_2:9770588-9770607 None:intergenic 65.0%
CGCAATTCCAGCCTCTGGCG+CGG - chr3_2:9770586-9770605 Msa0394680:CDS 65.0%
CATGGCAGCCGGTGCTCCAT+CGG - chr3_2:9771151-9771170 Msa0394680:intron 65.0%
AACGCCGTCCGATGGAGCAC+CGG + chr3_2:9771162-9771181 None:intergenic 65.0%
!! GGTGGCGTTGGCTTCACCAG+TGG - chr3_2:9771199-9771218 Msa0394680:intron 65.0%
CTGCTGCGCGCTCAAGAGCA+AGG - chr3_2:9771330-9771349 Msa0394680:intron 65.0%
GCAGCCGGTGCTCCATCGGA+CGG - chr3_2:9771155-9771174 Msa0394680:intron 70.0%
TGCGAGAAAGCGGGGACCGG+AGG - chr3_2:9771250-9771269 Msa0394680:intron 70.0%
GCAGCCGGTGCTCCATCGGA+CGG - chr3_2:9771155-9771174 Msa0394680:intron 70.0%
TGCGAGAAAGCGGGGACCGG+AGG - chr3_2:9771250-9771269 Msa0394680:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 9770525 9772567 9770525 ID=Msa0394680;Name=Msa0394680
chr3_2 mRNA 9770525 9772567 9770525 ID=Msa0394680-mRNA-1;Parent=Msa0394680;Name=Msa0394680-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|328
chr3_2 exon 9771734 9772567 9771734 ID=Msa0394680-mRNA-1:exon:2539;Parent=Msa0394680-mRNA-1
chr3_2 exon 9771555 9771626 9771555 ID=Msa0394680-mRNA-1:exon:2538;Parent=Msa0394680-mRNA-1
chr3_2 exon 9770525 9770605 9770525 ID=Msa0394680-mRNA-1:exon:2537;Parent=Msa0394680-mRNA-1
chr3_2 CDS 9771734 9772567 9771734 ID=Msa0394680-mRNA-1:cds;Parent=Msa0394680-mRNA-1
chr3_2 CDS 9771555 9771626 9771555 ID=Msa0394680-mRNA-1:cds;Parent=Msa0394680-mRNA-1
chr3_2 CDS 9770525 9770605 9770525 ID=Msa0394680-mRNA-1:cds;Parent=Msa0394680-mRNA-1
Gene Sequence

>Msa0394680

TTGCCTAACATCGAAACTATGGGGTCTCAAGTTGTTGATGAAAGTAATAATGAAAACCAACCGCAATTCCAGCCTCTGGCGCGGCAAAATTCAATGTACAACCTTACCCTTGATGAAGTTCAGAATCACTTAGGTGACTTAGGAAAGCCACTAAGTAGTATGAACCTTGACGAGCTTCTGAAAAATGTATGGACTGTTGAGGCAAACCAATCAATTCGCATGGAAAACGAGGACACAGCGCAAGCCGGACAAGTTGTTTTTCAACGTCAACCTAATCTGTCGTTAACCGGTCCGTTAAGCAAGAAGACGGTTGATGAAGTTTGGAGAGATATCCAACAAAACAACGATCATGAGGAGGTGAAGTCTCAAGAGATGCAGTCTACTTTGGGTGAGATGACATTAGAGGATTTTTTGGTTAAAGCAGGCGTTGTTTCGGCTGCATCTTCAAATAGAAAGAATACTAATAGTCCTACTCCTAAAGTCAGTGTTGTTGAATCGAATGTAGCGTTGCCACAGTTTTCTCCACATGGTCCGTGGATACAGTATGCACAACCACACTATCAGCATCCACAGCAAAGTGTGATGGCGACTTATGTTCCGAGCCAGATCATAGCTCAGTCATTGCACATGGCAGCCGGTGCTCCATCGGACGGCGTTCCGTATACAGATGGTCAGGTGGCGTTGGCTTCACCAGTGGTAGGAAACTTATCTGATACACAGAAATCTGCGAGAAAGCGGGGACCGGAGGACATGATTGAGAGGACTGTTGAGAGGAAGCAGAAGAGGATGATTAAGAATCGGGAATCTGCTGCGCGCTCAAGAGCAAGGAAACAGGCATACACAACTGAGTTGGAGATCAAAGTTTCGCGTCTGGAAGAGGAAAATGAAAAGCTGAGGAAAGAGAAGGAGCTTGAGAACATGCTAGCTAATGCTCCACCACCCGAACCTAAATGCCAGCTTCGTCGCGTATCATCAGCTTCGTTTTGA

Protein sequence

>Msa0394680

LPNIETMGSQVVDESNNENQPQFQPLARQNSMYNLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVEANQSIRMENEDTAQAGQVVFQRQPNLSLTGPLSKKTVDEVWRDIQQNNDHEEVKSQEMQSTLGEMTLEDFLVKAGVVSAASSNRKNTNSPTPKVSVVESNVALPQFSPHGPWIQYAQPHYQHPQQSVMATYVPSQIIAQSLHMAAGAPSDGVPYTDGQVALASPVVGNLSDTQKSARKRGPEDMIERTVERKQKRMIKNRESAARSRARKQAYTTELEIKVSRLEEENEKLRKEKELENMLANAPPPEPKCQLRRVSSASF*