Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394730 | AES68615.2 | 76.908 | 524 | 41 | 8 | 82 | 546 | 1 | 503 | 0.0 | 796 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394730 | sp|Q9SLH0|EIL1_ARATH | 54.307 | 267 | 109 | 3 | 30 | 286 | 45 | 308 | 1.26e-101 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394730 | G7IVH7 | 76.908 | 524 | 41 | 8 | 82 | 546 | 1 | 503 | 0.0 | 796 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0394730 | TF | EIL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394730 | MtrunA17_Chr3g0080401 | 83.862 | 347 | 30 | 5 | 82 | 415 | 1 | 334 | 0.0 | 592 |
| Msa0394730 | MtrunA17_Chr6g0476301 | 50.142 | 353 | 155 | 8 | 82 | 414 | 1 | 352 | 1.61e-102 | 313 |
| Msa0394730 | MtrunA17_Chr3g0118361 | 52.098 | 286 | 128 | 4 | 33 | 312 | 51 | 333 | 1.60e-101 | 319 |
| Msa0394730 | MtrunA17_Chr5g0440591 | 51.568 | 287 | 131 | 3 | 30 | 309 | 45 | 330 | 1.28e-100 | 316 |
| Msa0394730 | MtrunA17_Chr6g0473191 | 50.311 | 322 | 123 | 6 | 82 | 398 | 1 | 290 | 2.25e-95 | 292 |
| Msa0394730 | MtrunA17_Chr2g0329151 | 53.704 | 270 | 110 | 5 | 21 | 281 | 27 | 290 | 1.42e-94 | 301 |
| Msa0394730 | MtrunA17_Chr6g0476291 | 58.824 | 238 | 96 | 2 | 82 | 317 | 1 | 238 | 5.99e-92 | 282 |
| Msa0394730 | MtrunA17_Chr3g0124291 | 48.193 | 249 | 125 | 2 | 34 | 278 | 32 | 280 | 3.07e-84 | 268 |
| Msa0394730 | MtrunA17_Chr8g0382561 | 50.000 | 258 | 120 | 5 | 27 | 278 | 17 | 271 | 3.77e-78 | 253 |
| Msa0394730 | MtrunA17_Chr7g0260281 | 36.885 | 122 | 67 | 3 | 71 | 184 | 1 | 120 | 2.60e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394730 | AT2G27050.1 | 54.307 | 267 | 109 | 3 | 30 | 286 | 45 | 308 | 1.28e-102 | 321 |
| Msa0394730 | AT3G20770.1 | 52.265 | 287 | 129 | 3 | 30 | 309 | 45 | 330 | 2.25e-100 | 317 |
| Msa0394730 | AT1G73730.2 | 49.511 | 307 | 125 | 7 | 29 | 312 | 16 | 315 | 4.03e-94 | 298 |
| Msa0394730 | AT1G73730.1 | 49.511 | 307 | 125 | 7 | 29 | 312 | 28 | 327 | 4.20e-94 | 298 |
| Msa0394730 | AT5G10120.1 | 45.420 | 262 | 131 | 4 | 27 | 278 | 16 | 275 | 2.10e-78 | 254 |
| Msa0394730 | AT5G65100.1 | 42.446 | 278 | 135 | 4 | 26 | 280 | 32 | 307 | 2.59e-74 | 246 |
| Msa0394730 | AT5G21120.2 | 43.151 | 292 | 142 | 6 | 39 | 309 | 60 | 348 | 2.95e-73 | 243 |
| Msa0394730 | AT5G21120.3 | 43.151 | 292 | 142 | 6 | 39 | 309 | 53 | 341 | 3.72e-73 | 242 |
| Msa0394730 | AT5G21120.1 | 43.151 | 292 | 142 | 6 | 39 | 309 | 53 | 341 | 3.72e-73 | 242 |
Find 115 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACATTCTTCTTCATATT+TGG | 0.127902 | 3_2:-9849714 | None:intergenic |
| TTCTCTTGGCCAAACAATAT+TGG | 0.211643 | 3_2:+9851297 | Msa0394730:CDS |
| AAGGAGAAGATGTTTCTATT+TGG | 0.240323 | 3_2:+9850941 | Msa0394730:CDS |
| GAAGAATTTAAGAATGATTC+AGG | 0.273405 | 3_2:-9850169 | None:intergenic |
| ATGCTAAGGATACAGCTATT+TGG | 0.278436 | 3_2:+9850101 | Msa0394730:CDS |
| CTCCTGATCTTCTGAAAATT+AGG | 0.282984 | 3_2:-9850040 | None:intergenic |
| TGTTGCTGCTTCCTCCTATT+TGG | 0.284096 | 3_2:-9850417 | None:intergenic |
| CCATTTGAGGCTGCATGTTT+TGG | 0.285639 | 3_2:-9851059 | None:intergenic |
| TCTCTTGGCCAAACAATATT+GGG | 0.290198 | 3_2:+9851298 | Msa0394730:CDS |
| CACATGATTTGAAGAAGGTT+TGG | 0.299071 | 3_2:+9849978 | Msa0394730:CDS |
| CAACTCCAATCATTTGGAAT+TGG | 0.309446 | 3_2:-9850444 | None:intergenic |
| AGCTTCCAACTCCAATCATT+TGG | 0.315117 | 3_2:-9850450 | None:intergenic |
| TAACTTTGTGTTGCCACATT+AGG | 0.315473 | 3_2:-9851270 | None:intergenic |
| TTCATCTTTAGATGAGTTGA+TGG | 0.334799 | 3_2:+9851200 | Msa0394730:CDS |
| TATTAATTCCCAATATTGTT+TGG | 0.336531 | 3_2:-9851306 | None:intergenic |
| GATGTTCGTGGCTTCGTCTA+TGG | 0.352458 | 3_2:+9849587 | Msa0394730:CDS |
| CAAACCAATGATTGGCTCTT+CGG | 0.371062 | 3_2:+9849628 | Msa0394730:CDS |
| ATTGAACCTAATATCGTATC+AGG | 0.373081 | 3_2:-9849803 | None:intergenic |
| ATCATTGGTTTGCCATTGTC+AGG | 0.373218 | 3_2:-9849617 | None:intergenic |
| CGAATCATGGTGGAAGGAAA+TGG | 0.374307 | 3_2:+9849916 | Msa0394730:CDS |
| CCTCCACCATGGTGGCCAAC+AGG | 0.377036 | 3_2:+9849890 | Msa0394730:CDS |
| AACAATGCAAAACAAGATAA+AGG | 0.381513 | 3_2:+9847076 | Msa0394730:CDS |
| TCATATTTGGCGATTGCAGC+TGG | 0.389765 | 3_2:-9849701 | None:intergenic |
| AAGAGAAAGGCTGACCAAAT+AGG | 0.390964 | 3_2:+9850403 | Msa0394730:CDS |
| AACAACCAATTCCAAATGAT+TGG | 0.393537 | 3_2:+9850439 | Msa0394730:CDS |
| TTCTTAAATTCTTCTTGTGT+TGG | 0.395347 | 3_2:+9850178 | Msa0394730:CDS |
| CACAAAGTTATGATTTCTCT+TGG | 0.396627 | 3_2:+9851283 | Msa0394730:CDS |
| GTTGGAATCATGTTGGTAAC+TGG | 0.408033 | 3_2:-9851024 | None:intergenic |
| TAGAAATTCTGCTCCATTTG+AGG | 0.408160 | 3_2:-9851072 | None:intergenic |
| GACCTACCTGATACGATATT+AGG | 0.409480 | 3_2:+9849797 | Msa0394730:CDS |
| GTGCACAAGAGGGCATATTA+AGG | 0.410074 | 3_2:+9847260 | Msa0394730:CDS |
| CCAAAACATGCAGCCTCAAA+TGG | 0.411657 | 3_2:+9851059 | Msa0394730:CDS |
| CCCTCATCACATGATGATAA+AGG | 0.413199 | 3_2:-9850271 | None:intergenic |
| TATTAGTTATGAAGAAAGAT+TGG | 0.415453 | 3_2:+9850132 | Msa0394730:CDS |
| ACCCCAAAGAAAACATCCTT+TGG | 0.424688 | 3_2:+9849856 | Msa0394730:CDS |
| CGGAAAATCTACGCGGTTGG+TGG | 0.429144 | 3_2:+9849648 | Msa0394730:CDS |
| CAATCTTGTTATTGAGAGTA+GGG | 0.434145 | 3_2:+9850372 | Msa0394730:CDS |
| GGAGTATTGTTAGACATTCC+AGG | 0.438919 | 3_2:+9850059 | Msa0394730:CDS |
| AGGAACTAGAGACAAAGATA+TGG | 0.443648 | 3_2:+9847143 | Msa0394730:CDS |
| GACAATGGCTCGTGCACAAG+AGG | 0.447975 | 3_2:+9847249 | Msa0394730:CDS |
| TGAAAGTAGTTATGAGTTTG+TGG | 0.453514 | 3_2:+9850201 | Msa0394730:CDS |
| GAAGGAAATGGGATTTAGTA+AGG | 0.462346 | 3_2:+9849928 | Msa0394730:CDS |
| AGAAGATGTTTCTATTTGGA+TGG | 0.464894 | 3_2:+9850945 | Msa0394730:CDS |
| CACCATGATTCGTTCCCTGT+TGG | 0.467429 | 3_2:-9849905 | None:intergenic |
| GACAATGGCAAACCAATGAT+TGG | 0.467907 | 3_2:+9849620 | Msa0394730:CDS |
| AAAACCACATGATTTGAAGA+AGG | 0.473630 | 3_2:+9849973 | Msa0394730:CDS |
| TGTTGCTTGATGAGCAAGTA+AGG | 0.474666 | 3_2:+9849759 | Msa0394730:CDS |
| GGCCAACAGGGAACGAATCA+TGG | 0.488109 | 3_2:+9849903 | Msa0394730:CDS |
| ACCAACATGATTCCAACTCC+TGG | 0.488765 | 3_2:+9851030 | Msa0394730:CDS |
| AAAGTAAACTTTGAGGAATA+CGG | 0.490666 | 3_2:+9849677 | Msa0394730:CDS |
| CAATTCCAAATGATTGGAGT+TGG | 0.492900 | 3_2:+9850445 | Msa0394730:CDS |
| GCAAAATAAATTCAATGCTA+AGG | 0.497897 | 3_2:+9850087 | Msa0394730:CDS |
| CCTGTTGGCCACCATGGTGG+AGG | 0.500513 | 3_2:-9849890 | None:intergenic |
| AACCTCCATGATCATTGTCT+TGG | 0.503715 | 3_2:-9850339 | None:intergenic |
| ACATTAACGACTTCAGCATT+AGG | 0.506244 | 3_2:-9851138 | None:intergenic |
| GTACTGCAGCTTGCTGATGT+TGG | 0.509106 | 3_2:-9850504 | None:intergenic |
| GGTAGGTCATACAAGGAGTA+AGG | 0.514149 | 3_2:-9849782 | None:intergenic |
| GAATCATGGTGGAAGGAAAT+GGG | 0.515364 | 3_2:+9849917 | Msa0394730:CDS |
| GCACCACCGTTATCAACGTT+GGG | 0.515804 | 3_2:-9847049 | None:intergenic |
| TTGGAAAATTTGTGTGTTGA+CGG | 0.518161 | 3_2:+9849997 | Msa0394730:CDS |
| CGTATCAGGTAGGTCATACA+AGG | 0.521203 | 3_2:-9849789 | None:intergenic |
| AAATCTACGCGGTTGGTGGA+AGG | 0.522592 | 3_2:+9849652 | Msa0394730:CDS |
| AACTGGCACAACATGATTCA+CGG | 0.524808 | 3_2:-9851007 | None:intergenic |
| CAAACCTTCTTCAAATCATG+TGG | 0.527454 | 3_2:-9849977 | None:intergenic |
| CATTACCAAGACAATGATCA+TGG | 0.535851 | 3_2:+9850334 | Msa0394730:CDS |
| GTGATCTGATTTGCAACAGC+AGG | 0.537097 | 3_2:-9850526 | None:intergenic |
| GGATCAGTTTCAACAGTGAA+TGG | 0.537851 | 3_2:+9849734 | Msa0394730:CDS |
| ACCTTTATCATCATGTGATG+AGG | 0.538023 | 3_2:+9850270 | Msa0394730:CDS |
| ACAATCTTGTTATTGAGAGT+AGG | 0.541787 | 3_2:+9850371 | Msa0394730:CDS |
| CCTTTATCATCATGTGATGA+GGG | 0.544805 | 3_2:+9850271 | Msa0394730:CDS |
| GTATAATTCATGTATTGAGA+TGG | 0.547425 | 3_2:+9850972 | Msa0394730:CDS |
| CAGAATTTCTATGATCAACA+AGG | 0.550654 | 3_2:+9851084 | Msa0394730:CDS |
| TAGGGGTGCTAATAAGAGAA+AGG | 0.554483 | 3_2:+9850390 | Msa0394730:CDS |
| AGCACCACCGTTATCAACGT+TGG | 0.555643 | 3_2:-9847050 | None:intergenic |
| CTCATCTAAAGATGAATCGA+AGG | 0.557404 | 3_2:-9851193 | None:intergenic |
| ATGCATCCCAACGTTGATAA+CGG | 0.559621 | 3_2:+9847043 | Msa0394730:CDS |
| TGATCATTGTCTTGGTAATG+TGG | 0.562092 | 3_2:-9850331 | None:intergenic |
| CTTCGGAAAATCTACGCGGT+TGG | 0.564527 | 3_2:+9849645 | Msa0394730:CDS |
| AATCAGATCACTATTCATGC+AGG | 0.564840 | 3_2:+9850538 | Msa0394730:CDS |
| AAACATAGATATGACTATTG+AGG | 0.565786 | 3_2:+9847123 | Msa0394730:CDS |
| ACTTATTGATTCTCCTAATG+TGG | 0.567478 | 3_2:+9851257 | Msa0394730:CDS |
| TCGTTCCCTGTTGGCCACCA+TGG | 0.567749 | 3_2:-9849896 | None:intergenic |
| CAGGTACATGTTAAAGATGG+TGG | 0.568652 | 3_2:+9849556 | Msa0394730:intron |
| GAAGGACAAAGTAAACTTTG+AGG | 0.573836 | 3_2:+9849670 | Msa0394730:CDS |
| GGAGGAATGCCGCTTTCCAA+AGG | 0.574058 | 3_2:-9849872 | None:intergenic |
| CTCCACCATGGTGGCCAACA+GGG | 0.575877 | 3_2:+9849891 | Msa0394730:CDS |
| TTCCCTGTTGGCCACCATGG+TGG | 0.581079 | 3_2:-9849893 | None:intergenic |
| TACCATGCAGGTAATGACTC+AGG | 0.590669 | 3_2:+9850916 | Msa0394730:intron |
| AGAAAACATCCTTTGGAAAG+CGG | 0.596755 | 3_2:+9849863 | Msa0394730:CDS |
| GCTTGCTGATGTTGGTCAAG+AGG | 0.599308 | 3_2:-9850496 | None:intergenic |
| TCCAGGAGTTGGAATCATGT+TGG | 0.604429 | 3_2:-9851031 | None:intergenic |
| AGGGAACGAATCATGGTGGA+AGG | 0.608968 | 3_2:+9849910 | Msa0394730:CDS |
| GCCAAATATGAAGAAGAATG+TGG | 0.610704 | 3_2:+9849713 | Msa0394730:CDS |
| TGCAAAACAAGATAAAGGAA+AGG | 0.611308 | 3_2:+9847081 | Msa0394730:CDS |
| ACAATTGAAAAGAAAGACAA+TGG | 0.615680 | 3_2:+9847234 | Msa0394730:CDS |
| GCAGGTAATGACTCAGGAGA+AGG | 0.617966 | 3_2:+9850922 | Msa0394730:intron |
| AGAAAGGCTGACCAAATAGG+AGG | 0.621759 | 3_2:+9850406 | Msa0394730:CDS |
| AGAATTTCTATGATCAACAA+GGG | 0.625036 | 3_2:+9851085 | Msa0394730:CDS |
| GCATATCGAAGTCTCCATGT+TGG | 0.635104 | 3_2:-9850302 | None:intergenic |
| AATCTTGTTATTGAGAGTAG+GGG | 0.639924 | 3_2:+9850373 | Msa0394730:CDS |
| ACAATGGCTCGTGCACAAGA+GGG | 0.658700 | 3_2:+9847250 | Msa0394730:CDS |
| AACCTAATATCGTATCAGGT+AGG | 0.679742 | 3_2:-9849799 | None:intergenic |
| AGCTCAAAGAATCAACAACA+TGG | 0.679952 | 3_2:+9850469 | Msa0394730:CDS |
| GCGGCATTCCTCCACCATGG+TGG | 0.682914 | 3_2:+9849882 | Msa0394730:CDS |
| GGACAGGTACATGTTAAAGA+TGG | 0.686569 | 3_2:+9849553 | Msa0394730:intron |
| GAATTTCTATGATCAACAAG+GGG | 0.696998 | 3_2:+9851086 | Msa0394730:CDS |
| GGAAACAGATGATTATGATG+TGG | 0.698666 | 3_2:+9850222 | Msa0394730:CDS |
| TATGGAGTAGTACCTGACAA+TGG | 0.702873 | 3_2:+9849605 | Msa0394730:CDS |
| AAAGCGGCATTCCTCCACCA+TGG | 0.708484 | 3_2:+9849879 | Msa0394730:CDS |
| TGAGGGTTCTGATACCAACA+TGG | 0.719170 | 3_2:+9850288 | Msa0394730:CDS |
| CATCCCAACGTTGATAACGG+TGG | 0.725792 | 3_2:+9847046 | Msa0394730:CDS |
| GGCTCTTCGGAAAATCTACG+CGG | 0.742332 | 3_2:+9849641 | Msa0394730:CDS |
| CAACAGGGAACGAATCATGG+TGG | 0.754137 | 3_2:+9849906 | Msa0394730:CDS |
| TACCAAGACAATGATCATGG+AGG | 0.766248 | 3_2:+9850337 | Msa0394730:CDS |
| TGGCACAACATGATTCACGG+TGG | 0.797759 | 3_2:-9851004 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATATATTAAATTTAA+AGG | - | chr3_2:9847891-9847910 | None:intergenic | 0.0% |
| !!! | TTAATATATAATATTTTAAA+AGG | + | chr3_2:9847897-9847916 | Msa0394730:intron | 0.0% |
| !!! | TAATATATAATATTTTAAAA+GGG | + | chr3_2:9847898-9847917 | Msa0394730:intron | 0.0% |
| !!! | AAATTATATATTTTAAAATA+GGG | - | chr3_2:9848183-9848202 | None:intergenic | 0.0% |
| !!! | AAAATTATATATTTTAAAAT+AGG | - | chr3_2:9848184-9848203 | None:intergenic | 0.0% |
| !!! | TCAATAGAAATAAAAATTTT+GGG | - | chr3_2:9847425-9847444 | None:intergenic | 10.0% |
| !!! | TTCAATAGAAATAAAAATTT+TGG | - | chr3_2:9847426-9847445 | None:intergenic | 10.0% |
| !! | AAAAATTAGCATAAATTAAA+AGG | + | chr3_2:9847616-9847635 | Msa0394730:intron | 10.0% |
| !! | GAAGAAAAAAATAAAAAAAT+TGG | - | chr3_2:9848023-9848042 | None:intergenic | 10.0% |
| !!! | TCAAAAAAAAATATTTTTCA+AGG | + | chr3_2:9848082-9848101 | Msa0394730:intron | 10.0% |
| !!! | CAAAAAAAAATATTTTTCAA+GGG | + | chr3_2:9848083-9848102 | Msa0394730:intron | 10.0% |
| !!! | AAAAAAAAATATTTTTCAAG+GGG | + | chr3_2:9848084-9848103 | Msa0394730:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTCATCTT+AGG | + | chr3_2:9848415-9848434 | Msa0394730:intron | 10.0% |
| !!! | TTTTTTTTTTTTTCATCTTA+GGG | + | chr3_2:9848416-9848435 | Msa0394730:intron | 10.0% |
| !!! | AAAAGATTTTATGAATTTTA+AGG | + | chr3_2:9848630-9848649 | Msa0394730:intron | 10.0% |
| !!! | TTTAATAAATTAGATTTTGA+TGG | - | chr3_2:9849070-9849089 | None:intergenic | 10.0% |
| !! | TTTACTTCATATTAAAATTA+TGG | - | chr3_2:9849400-9849419 | None:intergenic | 10.0% |
| !!! | TCTGAAAATATTCTTTAAAA+CGG | - | chr3_2:9847363-9847382 | None:intergenic | 15.0% |
| !!! | CAATAGAAATAAAAATTTTG+GGG | - | chr3_2:9847424-9847443 | None:intergenic | 15.0% |
| !!! | CAAAACAAAAATATTTTACA+GGG | - | chr3_2:9847971-9847990 | None:intergenic | 15.0% |
| !!! | TCAAAACAAAAATATTTTAC+AGG | - | chr3_2:9847972-9847991 | None:intergenic | 15.0% |
| !!! | AAAAAAAATATTTTTCAAGG+GGG | + | chr3_2:9848085-9848104 | Msa0394730:intron | 15.0% |
| !!! | ATATTTTAAAATAGGGTTAA+TGG | - | chr3_2:9848176-9848195 | None:intergenic | 15.0% |
| !!! | CCAAATACAAATATTTTTTT+AGG | - | chr3_2:9848213-9848232 | None:intergenic | 15.0% |
| !! | CCTAAAAAAATATTTGTATT+TGG | + | chr3_2:9848210-9848229 | Msa0394730:intron | 15.0% |
| !!! | TTTTTTTTTTTTCATCTTAG+GGG | + | chr3_2:9848417-9848436 | Msa0394730:intron | 15.0% |
| !!! | AAGATTTTAAAAGATTTTGT+AGG | + | chr3_2:9848490-9848509 | Msa0394730:intron | 15.0% |
| !!! | TTTACATCATAAGATTTTAA+AGG | + | chr3_2:9848574-9848593 | Msa0394730:intron | 15.0% |
| !!! | AAGATTTTAAAGGATTTTAA+AGG | + | chr3_2:9848584-9848603 | Msa0394730:intron | 15.0% |
| !!! | TTTATGAATTGATTTCATAT+AGG | + | chr3_2:9849442-9849461 | Msa0394730:intron | 15.0% |
| !!! | TTACTTAAAAACTAGTTTTT+AGG | + | chr3_2:9850693-9850712 | Msa0394730:intron | 15.0% |
| !!! | TACTTAAAAACTAGTTTTTA+GGG | + | chr3_2:9850694-9850713 | Msa0394730:intron | 15.0% |
| !!! | GTCTATAATTTTTTTTTTGA+GGG | - | chr3_2:9850741-9850760 | None:intergenic | 15.0% |
| !!! | AGTCTATAATTTTTTTTTTG+AGG | - | chr3_2:9850742-9850761 | None:intergenic | 15.0% |
| !!! | GTTTTAAAGAATATTTTCAG+AGG | + | chr3_2:9847362-9847381 | Msa0394730:intron | 20.0% |
| !! | TAGCTAAAAATATATTGTTG+GGG | - | chr3_2:9847575-9847594 | None:intergenic | 20.0% |
| !! | GTAGCTAAAAATATATTGTT+GGG | - | chr3_2:9847576-9847595 | None:intergenic | 20.0% |
| !!! | TTTGTCTTATTTTGACATTT+CGG | + | chr3_2:9847670-9847689 | Msa0394730:intron | 20.0% |
| !! | TGTTTAATCTCTATAAAACT+AGG | - | chr3_2:9847861-9847880 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTTCAGAAATTC+TGG | + | chr3_2:9848031-9848050 | Msa0394730:intron | 20.0% |
| !!! | TATTTTAATTCTATCTCTTG+AGG | + | chr3_2:9848269-9848288 | Msa0394730:intron | 20.0% |
| !!! | ATATTTTAGTTAGTGAACTA+GGG | + | chr3_2:9848356-9848375 | Msa0394730:intron | 20.0% |
| !!! | TTTTTTTTTTTCATCTTAGG+GGG | + | chr3_2:9848418-9848437 | Msa0394730:intron | 20.0% |
| !!! | ATTTTCAATTTGGATTTCAA+TGG | + | chr3_2:9848550-9848569 | Msa0394730:intron | 20.0% |
| !!! | AAGGATTTTAAAGGATTTTA+TGG | + | chr3_2:9848593-9848612 | Msa0394730:intron | 20.0% |
| !!! | GCAATTTTAAAAAAATCTTG+TGG | - | chr3_2:9849198-9849217 | None:intergenic | 20.0% |
| !! | TTAATTATGAAAAAGTCTTG+TGG | - | chr3_2:9849240-9849259 | None:intergenic | 20.0% |
| !! | TATTAGTTATGAAGAAAGAT+TGG | + | chr3_2:9850132-9850151 | Msa0394730:CDS | 20.0% |
| ! | AACAATGCAAAACAAGATAA+AGG | + | chr3_2:9847076-9847095 | Msa0394730:CDS | 25.0% |
| ! | AAACATAGATATGACTATTG+AGG | + | chr3_2:9847123-9847142 | Msa0394730:CDS | 25.0% |
| ! | ACAATTGAAAAGAAAGACAA+TGG | + | chr3_2:9847234-9847253 | Msa0394730:CDS | 25.0% |
| !!! | TTTATTTCTATTGAACCACT+AGG | + | chr3_2:9847431-9847450 | Msa0394730:intron | 25.0% |
| ! | AGACATATTAATATACCTAG+TGG | - | chr3_2:9847547-9847566 | None:intergenic | 25.0% |
| ! | GGTAGCTAAAAATATATTGT+TGG | - | chr3_2:9847577-9847596 | None:intergenic | 25.0% |
| !! | TTTGCAAATGAATTTGTTTG+AGG | - | chr3_2:9847598-9847617 | None:intergenic | 25.0% |
| ! | TCAATAGTCAAACATAATAG+AGG | + | chr3_2:9847738-9847757 | Msa0394730:intron | 25.0% |
| !! | AGCTAGAGAAATTTTTACAA+GGG | - | chr3_2:9848238-9848257 | None:intergenic | 25.0% |
| !! | AAGCTAGAGAAATTTTTACA+AGG | - | chr3_2:9848239-9848258 | None:intergenic | 25.0% |
| ! | GATAGAATTAAAATATCCAG+CGG | - | chr3_2:9848264-9848283 | None:intergenic | 25.0% |
| !!! | GGATCATTTTCAAGTTTAAT+TGG | + | chr3_2:9848323-9848342 | Msa0394730:intron | 25.0% |
| !!! | CATATTTTAGTTAGTGAACT+AGG | + | chr3_2:9848355-9848374 | Msa0394730:intron | 25.0% |
| !!! | CATGATTTTAAAAGACAATC+AGG | + | chr3_2:9848527-9848546 | Msa0394730:intron | 25.0% |
| !!! | CTTTGAAATTTGAATACCAT+GGG | + | chr3_2:9849095-9849114 | Msa0394730:intron | 25.0% |
| !!! | GTCATTTTAAAAAAGTCTTG+AGG | - | chr3_2:9849156-9849175 | None:intergenic | 25.0% |
| ! | AAAGAAATCGAATCTGATAA+GGG | - | chr3_2:9849305-9849324 | None:intergenic | 25.0% |
| ! | AAAAGAAATCGAATCTGATA+AGG | - | chr3_2:9849306-9849325 | None:intergenic | 25.0% |
| ! | AAGTCAAAGTTCTCAAAATT+GGG | - | chr3_2:9849487-9849506 | None:intergenic | 25.0% |
| !! | AAAGTAAACTTTGAGGAATA+CGG | + | chr3_2:9849677-9849696 | Msa0394730:CDS | 25.0% |
| !!! | AAATCATGTGGTTTTTTGTA+TGG | - | chr3_2:9849968-9849987 | None:intergenic | 25.0% |
| ! | GCAAAATAAATTCAATGCTA+AGG | + | chr3_2:9850087-9850106 | Msa0394730:CDS | 25.0% |
| ! | GAAGAATTTAAGAATGATTC+AGG | - | chr3_2:9850172-9850191 | None:intergenic | 25.0% |
| ! | TTCTTAAATTCTTCTTGTGT+TGG | + | chr3_2:9850178-9850197 | Msa0394730:CDS | 25.0% |
| !! | TTTTTCATATGTAAGTAGCT+CGG | - | chr3_2:9850809-9850828 | None:intergenic | 25.0% |
| ! | GTATAATTCATGTATTGAGA+TGG | + | chr3_2:9850972-9850991 | Msa0394730:CDS | 25.0% |
| ! | AGAATTTCTATGATCAACAA+GGG | + | chr3_2:9851085-9851104 | Msa0394730:CDS | 25.0% |
| TGCAAAACAAGATAAAGGAA+AGG | + | chr3_2:9847081-9847100 | Msa0394730:CDS | 30.0% | |
| AAAGGAAAGGAAAAAGAAGA+AGG | + | chr3_2:9847094-9847113 | Msa0394730:CDS | 30.0% | |
| !!! | TGAACCACTAGGTATTTTTT+TGG | + | chr3_2:9847442-9847461 | Msa0394730:intron | 30.0% |
| GACAATGCATAATATATGCA+AGG | - | chr3_2:9847493-9847512 | None:intergenic | 30.0% | |
| ! | TGATATTAGCTTAGTTGGTA+TGG | - | chr3_2:9847515-9847534 | None:intergenic | 30.0% |
| ! | TATTTTACAGGGTGTAAAAC+CGG | - | chr3_2:9847960-9847979 | None:intergenic | 30.0% |
| !!! | TTTTGATTTATCCCCCTAAT+AGG | + | chr3_2:9847986-9848005 | Msa0394730:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | - | chr3_2:9848054-9848073 | None:intergenic | 30.0% |
| ! | GTTTTTGAATGACCTATTAG+GGG | - | chr3_2:9848053-9848072 | None:intergenic | 30.0% |
| ! | GGTTTTTGAATGACCTATTA+GGG | - | chr3_2:9848052-9848071 | None:intergenic | 30.0% |
| ! | TGGTTTTTGAATGACCTATT+AGG | - | chr3_2:9848051-9848070 | None:intergenic | 30.0% |
| ! | TGGTTTTTGAATGACCTATT+AGG | + | chr3_2:9848051-9848070 | Msa0394730:intron | 30.0% |
| ! | GGTTTTTGAATGACCTATTA+GGG | + | chr3_2:9848052-9848071 | Msa0394730:intron | 30.0% |
| ! | GTTTTTGAATGACCTATTAG+GGG | + | chr3_2:9848053-9848072 | Msa0394730:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | + | chr3_2:9848054-9848073 | Msa0394730:intron | 30.0% |
| !! | CCTGTAATATAGGTCATTTT+CGG | - | chr3_2:9848143-9848162 | None:intergenic | 30.0% |
| CGAAAATGACCTATATTACA+GGG | + | chr3_2:9848141-9848160 | Msa0394730:intron | 30.0% | |
| ! | GCTAGAGAAATTTTTACAAG+GGG | - | chr3_2:9848237-9848256 | None:intergenic | 30.0% |
| TTAAACTTGAAAATGATCCC+TGG | - | chr3_2:9848322-9848341 | None:intergenic | 30.0% | |
| !! | GTATTGGATTAGGATTTTGA+AGG | + | chr3_2:9848442-9848461 | Msa0394730:intron | 30.0% |
| ! | GACAATCAGGATTTTCAATT+TGG | + | chr3_2:9848540-9848559 | Msa0394730:intron | 30.0% |
| ! | TTTTTATGAGAGATAGAGAG+AGG | + | chr3_2:9848728-9848747 | Msa0394730:intron | 30.0% |
| ! | TTTTATGAGAGATAGAGAGA+GGG | + | chr3_2:9848729-9848748 | Msa0394730:intron | 30.0% |
| ATGAAGACAGAAGATTTCTT+GGG | - | chr3_2:9849001-9849020 | None:intergenic | 30.0% | |
| CCATGGTATTCAAATTTCAA+AGG | - | chr3_2:9849097-9849116 | None:intergenic | 30.0% | |
| !! | CCTTTGAAATTTGAATACCA+TGG | + | chr3_2:9849094-9849113 | Msa0394730:intron | 30.0% |
| ATCACTTAAAAAAAGTCCCA+TGG | - | chr3_2:9849114-9849133 | None:intergenic | 30.0% | |
| AAGAAATCGAATCTGATAAG+GGG | - | chr3_2:9849304-9849323 | None:intergenic | 30.0% | |
| CAAGTCAAAGTTCTCAAAAT+TGG | - | chr3_2:9849488-9849507 | None:intergenic | 30.0% | |
| TCCACATTCTTCTTCATATT+TGG | - | chr3_2:9849717-9849736 | None:intergenic | 30.0% | |
| ATTGAACCTAATATCGTATC+AGG | - | chr3_2:9849806-9849825 | None:intergenic | 30.0% | |
| ! | TTCCAAAGGATGTTTTCTTT+GGG | - | chr3_2:9849861-9849880 | None:intergenic | 30.0% |
| ! | TTTCCAAAGGATGTTTTCTT+TGG | - | chr3_2:9849862-9849881 | None:intergenic | 30.0% |
| AAAACCACATGATTTGAAGA+AGG | + | chr3_2:9849973-9849992 | Msa0394730:CDS | 30.0% | |
| TTGGAAAATTTGTGTGTTGA+CGG | + | chr3_2:9849997-9850016 | Msa0394730:CDS | 30.0% | |
| TGAAAGTAGTTATGAGTTTG+TGG | + | chr3_2:9850201-9850220 | Msa0394730:CDS | 30.0% | |
| !! | ACAATCTTGTTATTGAGAGT+AGG | + | chr3_2:9850371-9850390 | Msa0394730:CDS | 30.0% |
| !! | CAATCTTGTTATTGAGAGTA+GGG | + | chr3_2:9850372-9850391 | Msa0394730:CDS | 30.0% |
| !! | AATCTTGTTATTGAGAGTAG+GGG | + | chr3_2:9850373-9850392 | Msa0394730:CDS | 30.0% |
| AACAACCAATTCCAAATGAT+TGG | + | chr3_2:9850439-9850458 | Msa0394730:CDS | 30.0% | |
| ATGCATGACAAATGTAGATA+GGG | - | chr3_2:9850653-9850672 | None:intergenic | 30.0% | |
| ! | AAGGAGAAGATGTTTCTATT+TGG | + | chr3_2:9850941-9850960 | Msa0394730:CDS | 30.0% |
| ! | AGAAGATGTTTCTATTTGGA+TGG | + | chr3_2:9850945-9850964 | Msa0394730:CDS | 30.0% |
| CAGAATTTCTATGATCAACA+AGG | + | chr3_2:9851084-9851103 | Msa0394730:CDS | 30.0% | |
| GAATTTCTATGATCAACAAG+GGG | + | chr3_2:9851086-9851105 | Msa0394730:CDS | 30.0% | |
| ! | TTCATCTTTAGATGAGTTGA+TGG | + | chr3_2:9851200-9851219 | Msa0394730:CDS | 30.0% |
| !! | ACTTATTGATTCTCCTAATG+TGG | + | chr3_2:9851257-9851276 | Msa0394730:CDS | 30.0% |
| CACAAAGTTATGATTTCTCT+TGG | + | chr3_2:9851283-9851302 | Msa0394730:CDS | 30.0% | |
| AGGAACTAGAGACAAAGATA+TGG | + | chr3_2:9847143-9847162 | Msa0394730:CDS | 35.0% | |
| ! | CGAATCCTTTTTGATAGGAT+GGG | + | chr3_2:9847385-9847404 | Msa0394730:intron | 35.0% |
| ! | GAATCCTTTTTGATAGGATG+GGG | + | chr3_2:9847386-9847405 | Msa0394730:intron | 35.0% |
| !!! | ACCACTAGGTATTTTTTTGG+TGG | + | chr3_2:9847445-9847464 | Msa0394730:intron | 35.0% |
| ACCACCAAAAAAATACCTAG+TGG | - | chr3_2:9847449-9847468 | None:intergenic | 35.0% | |
| !!! | ACTAGGTATTTTTTTGGTGG+TGG | + | chr3_2:9847448-9847467 | Msa0394730:intron | 35.0% |
| CATAATATATGCAAGGTCTG+GGG | - | chr3_2:9847486-9847505 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr3_2:9847487-9847506 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | - | chr3_2:9847488-9847507 | None:intergenic | 35.0% | |
| ! | TCTCGTGATATTAGCTTAGT+TGG | - | chr3_2:9847520-9847539 | None:intergenic | 35.0% |
| GAAATGACCTATATTACAGG+GGG | - | chr3_2:9847938-9847957 | None:intergenic | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | - | chr3_2:9847939-9847958 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | - | chr3_2:9847940-9847959 | None:intergenic | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | + | chr3_2:9847938-9847957 | Msa0394730:intron | 35.0% | |
| ! | TTTTGAATGACCTATTAGGG+GGG | + | chr3_2:9848055-9848074 | Msa0394730:intron | 35.0% |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | - | chr3_2:9848068-9848087 | None:intergenic | 35.0% |
| CCGAAAATGACCTATATTAC+AGG | + | chr3_2:9848140-9848159 | Msa0394730:intron | 35.0% | |
| TGCTTTACTCCCTGTAATAT+AGG | - | chr3_2:9848153-9848172 | None:intergenic | 35.0% | |
| AAAATCGCAAGTTAAAGTCC+AGG | + | chr3_2:9848301-9848320 | Msa0394730:intron | 35.0% | |
| AAATCGCAAGTTAAAGTCCA+GGG | + | chr3_2:9848302-9848321 | Msa0394730:intron | 35.0% | |
| TTTATGAGAGATAGAGAGAG+GGG | + | chr3_2:9848730-9848749 | Msa0394730:intron | 35.0% | |
| CATGAAGACAGAAGATTTCT+TGG | - | chr3_2:9849002-9849021 | None:intergenic | 35.0% | |
| ! | GTATTGGATTAGGATTCTGA+GGG | - | chr3_2:9849278-9849297 | None:intergenic | 35.0% |
| ! | TGTATTGGATTAGGATTCTG+AGG | - | chr3_2:9849279-9849298 | None:intergenic | 35.0% |
| AGAAATCGAATCTGATAAGG+GGG | - | chr3_2:9849303-9849322 | None:intergenic | 35.0% | |
| GAAGGACAAAGTAAACTTTG+AGG | + | chr3_2:9849670-9849689 | Msa0394730:CDS | 35.0% | |
| GCCAAATATGAAGAAGAATG+TGG | + | chr3_2:9849713-9849732 | Msa0394730:CDS | 35.0% | |
| AACCTAATATCGTATCAGGT+AGG | - | chr3_2:9849802-9849821 | None:intergenic | 35.0% | |
| ! | TCCAAAGGATGTTTTCTTTG+GGG | - | chr3_2:9849860-9849879 | None:intergenic | 35.0% |
| ! | AGAAAACATCCTTTGGAAAG+CGG | + | chr3_2:9849863-9849882 | Msa0394730:CDS | 35.0% |
| GAAGGAAATGGGATTTAGTA+AGG | + | chr3_2:9849928-9849947 | Msa0394730:CDS | 35.0% | |
| !!! | TCATGTGGTTTTTTGTATGG+TGG | - | chr3_2:9849965-9849984 | None:intergenic | 35.0% |
| CAAACCTTCTTCAAATCATG+TGG | - | chr3_2:9849980-9849999 | None:intergenic | 35.0% | |
| CACATGATTTGAAGAAGGTT+TGG | + | chr3_2:9849978-9849997 | Msa0394730:CDS | 35.0% | |
| ! | CTCCTAATTTTCAGAAGATC+AGG | + | chr3_2:9850038-9850057 | Msa0394730:CDS | 35.0% |
| ! | CTCCTGATCTTCTGAAAATT+AGG | - | chr3_2:9850043-9850062 | None:intergenic | 35.0% |
| !!! | GAATTTATTTTGCAAGCTCC+TGG | - | chr3_2:9850080-9850099 | None:intergenic | 35.0% |
| ATGCTAAGGATACAGCTATT+TGG | + | chr3_2:9850101-9850120 | Msa0394730:CDS | 35.0% | |
| GGAAACAGATGATTATGATG+TGG | + | chr3_2:9850222-9850241 | Msa0394730:CDS | 35.0% | |
| ACCTTTATCATCATGTGATG+AGG | + | chr3_2:9850270-9850289 | Msa0394730:CDS | 35.0% | |
| CCTTTATCATCATGTGATGA+GGG | + | chr3_2:9850271-9850290 | Msa0394730:CDS | 35.0% | |
| !! | TGATCATTGTCTTGGTAATG+TGG | - | chr3_2:9850334-9850353 | None:intergenic | 35.0% |
| CATTACCAAGACAATGATCA+TGG | + | chr3_2:9850334-9850353 | Msa0394730:CDS | 35.0% | |
| ! | CAACTCCAATCATTTGGAAT+TGG | - | chr3_2:9850447-9850466 | None:intergenic | 35.0% |
| CAATTCCAAATGATTGGAGT+TGG | + | chr3_2:9850445-9850464 | Msa0394730:CDS | 35.0% | |
| AGCTCAAAGAATCAACAACA+TGG | + | chr3_2:9850469-9850488 | Msa0394730:CDS | 35.0% | |
| AATCAGATCACTATTCATGC+AGG | + | chr3_2:9850538-9850557 | Msa0394730:CDS | 35.0% | |
| ACTATTCATGCAGGTAATCA+TGG | + | chr3_2:9850547-9850566 | Msa0394730:intron | 35.0% | |
| GATGCATGACAAATGTAGAT+AGG | - | chr3_2:9850654-9850673 | None:intergenic | 35.0% | |
| ! | TCTTGATTTGATTACCATGC+AGG | + | chr3_2:9850904-9850923 | Msa0394730:intron | 35.0% |
| !! | TTTTGGTTAAATCCAGGAGT+TGG | - | chr3_2:9851045-9851064 | None:intergenic | 35.0% |
| !!! | TGCATGTTTTGGTTAAATCC+AGG | - | chr3_2:9851051-9851070 | None:intergenic | 35.0% |
| TAGAAATTCTGCTCCATTTG+AGG | - | chr3_2:9851075-9851094 | None:intergenic | 35.0% | |
| ACATTAACGACTTCAGCATT+AGG | - | chr3_2:9851141-9851160 | None:intergenic | 35.0% | |
| ! | GTTGAGACATTTTCATGCAT+TGG | - | chr3_2:9851165-9851184 | None:intergenic | 35.0% |
| CTCATCTAAAGATGAATCGA+AGG | - | chr3_2:9851196-9851215 | None:intergenic | 35.0% | |
| TAACTTTGTGTTGCCACATT+AGG | - | chr3_2:9851273-9851292 | None:intergenic | 35.0% | |
| TTCTCTTGGCCAAACAATAT+TGG | + | chr3_2:9851297-9851316 | Msa0394730:CDS | 35.0% | |
| TCTCTTGGCCAAACAATATT+GGG | + | chr3_2:9851298-9851317 | Msa0394730:CDS | 35.0% | |
| ! | ATGCATCCCAACGTTGATAA+CGG | + | chr3_2:9847043-9847062 | Msa0394730:CDS | 40.0% |
| GGAAAGGAAAAAGAAGAAGG+TGG | + | chr3_2:9847097-9847116 | Msa0394730:CDS | 40.0% | |
| ! | AGAGGCGAATCCTTTTTGAT+AGG | + | chr3_2:9847380-9847399 | Msa0394730:intron | 40.0% |
| ! | GCGAATCCTTTTTGATAGGA+TGG | + | chr3_2:9847384-9847403 | Msa0394730:intron | 40.0% |
| ATATCACGAGAACAACCACT+AGG | + | chr3_2:9847529-9847548 | Msa0394730:intron | 40.0% | |
| TGCTTTACCCCCTGTAATAT+AGG | + | chr3_2:9847928-9847947 | Msa0394730:intron | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | - | chr3_2:9847941-9847960 | None:intergenic | 40.0% | |
| GTGAACTAGGGTAAACTTAC+AGG | + | chr3_2:9848368-9848387 | Msa0394730:intron | 40.0% | |
| ! | TTTCATCTTAGGGGGTGTAT+TGG | + | chr3_2:9848426-9848445 | Msa0394730:intron | 40.0% |
| TTATGAGAGATAGAGAGAGG+GGG | + | chr3_2:9848731-9848750 | Msa0394730:intron | 40.0% | |
| GAGAAAAGAGAGGAGATAGA+GGG | + | chr3_2:9848774-9848793 | Msa0394730:intron | 40.0% | |
| TAAGGGGGATGTATTGGATT+AGG | - | chr3_2:9849288-9849307 | None:intergenic | 40.0% | |
| ATCTGATAAGGGGGATGTAT+TGG | - | chr3_2:9849294-9849313 | None:intergenic | 40.0% | |
| GGACAGGTACATGTTAAAGA+TGG | + | chr3_2:9849553-9849572 | Msa0394730:intron | 40.0% | |
| CAGGTACATGTTAAAGATGG+TGG | + | chr3_2:9849556-9849575 | Msa0394730:intron | 40.0% | |
| ! | GTGGAATTTTGTGATGTTCG+TGG | + | chr3_2:9849575-9849594 | Msa0394730:CDS | 40.0% |
| TATGGAGTAGTACCTGACAA+TGG | + | chr3_2:9849605-9849624 | Msa0394730:CDS | 40.0% | |
| !! | ATCATTGGTTTGCCATTGTC+AGG | - | chr3_2:9849620-9849639 | None:intergenic | 40.0% |
| GACAATGGCAAACCAATGAT+TGG | + | chr3_2:9849620-9849639 | Msa0394730:CDS | 40.0% | |
| ! | CAAACCAATGATTGGCTCTT+CGG | + | chr3_2:9849628-9849647 | Msa0394730:CDS | 40.0% |
| ! | TTTTCCGAAGAGCCAATCAT+TGG | - | chr3_2:9849635-9849654 | None:intergenic | 40.0% |
| GGATCAGTTTCAACAGTGAA+TGG | + | chr3_2:9849734-9849753 | Msa0394730:CDS | 40.0% | |
| ! | TGTTGCTTGATGAGCAAGTA+AGG | + | chr3_2:9849759-9849778 | Msa0394730:CDS | 40.0% |
| GACCTACCTGATACGATATT+AGG | + | chr3_2:9849797-9849816 | Msa0394730:CDS | 40.0% | |
| !! | AAAGGATGTTTTCTTTGGGG+TGG | - | chr3_2:9849857-9849876 | None:intergenic | 40.0% |
| ACCCCAAAGAAAACATCCTT+TGG | + | chr3_2:9849856-9849875 | Msa0394730:CDS | 40.0% | |
| ! | GAATCATGGTGGAAGGAAAT+GGG | + | chr3_2:9849917-9849936 | Msa0394730:CDS | 40.0% |
| !!! | GTGGTTTTTTGTATGGTGGT+GGG | - | chr3_2:9849961-9849980 | None:intergenic | 40.0% |
| !!! | TGTGGTTTTTTGTATGGTGG+TGG | - | chr3_2:9849962-9849981 | None:intergenic | 40.0% |
| !! | GGAGTATTGTTAGACATTCC+AGG | + | chr3_2:9850059-9850078 | Msa0394730:CDS | 40.0% |
| CCCTCATCACATGATGATAA+AGG | - | chr3_2:9850274-9850293 | None:intergenic | 40.0% | |
| TACCAAGACAATGATCATGG+AGG | + | chr3_2:9850337-9850356 | Msa0394730:CDS | 40.0% | |
| AACCTCCATGATCATTGTCT+TGG | - | chr3_2:9850342-9850361 | None:intergenic | 40.0% | |
| !! | TAGGGGTGCTAATAAGAGAA+AGG | + | chr3_2:9850390-9850409 | Msa0394730:CDS | 40.0% |
| AAGAGAAAGGCTGACCAAAT+AGG | + | chr3_2:9850403-9850422 | Msa0394730:CDS | 40.0% | |
| AGCTTCCAACTCCAATCATT+TGG | - | chr3_2:9850453-9850472 | None:intergenic | 40.0% | |
| TCATATGTAAGTAGCTCGGT+TGG | - | chr3_2:9850805-9850824 | None:intergenic | 40.0% | |
| AACTGGCACAACATGATTCA+CGG | - | chr3_2:9851010-9851029 | None:intergenic | 40.0% | |
| !! | GTTGGAATCATGTTGGTAAC+TGG | - | chr3_2:9851027-9851046 | None:intergenic | 40.0% |
| ! | GTGCACAAGAGGGCATATTA+AGG | + | chr3_2:9847260-9847279 | Msa0394730:CDS | 45.0% |
| GCTACCCCATCCTATCAAAA+AGG | - | chr3_2:9847393-9847412 | None:intergenic | 45.0% | |
| TTGATAGGATGGGGTAGCAT+TGG | + | chr3_2:9847395-9847414 | Msa0394730:intron | 45.0% | |
| !!! | GGTATTTTTTTGGTGGTGGC+CGG | + | chr3_2:9847452-9847471 | Msa0394730:intron | 45.0% |
| !!! | GTATTTTTTTGGTGGTGGCC+GGG | + | chr3_2:9847453-9847472 | Msa0394730:intron | 45.0% |
| !!! | TATTTTTTTGGTGGTGGCCG+GGG | + | chr3_2:9847454-9847473 | Msa0394730:intron | 45.0% |
| ! | CTTAGGGGGTGTATTGGATT+AGG | + | chr3_2:9848432-9848451 | Msa0394730:intron | 45.0% |
| GGAGAAAAGAGAGGAGATAG+AGG | + | chr3_2:9848773-9848792 | Msa0394730:intron | 45.0% | |
| AGAGAGAGACGAAGAGAGAA+GGG | + | chr3_2:9848872-9848891 | Msa0394730:intron | 45.0% | |
| AGAAAAGAGAGGAGAGGGAA+GGG | + | chr3_2:9848916-9848935 | Msa0394730:intron | 45.0% | |
| ACAGCACATGTCAGCTCAAT+GGG | - | chr3_2:9849533-9849552 | None:intergenic | 45.0% | |
| TCATATTTGGCGATTGCAGC+TGG | - | chr3_2:9849704-9849723 | None:intergenic | 45.0% | |
| GGTAGGTCATACAAGGAGTA+AGG | - | chr3_2:9849785-9849804 | None:intergenic | 45.0% | |
| CGTATCAGGTAGGTCATACA+AGG | - | chr3_2:9849792-9849811 | None:intergenic | 45.0% | |
| ! | CGAATCATGGTGGAAGGAAA+TGG | + | chr3_2:9849916-9849935 | Msa0394730:CDS | 45.0% |
| ! | TGAGGGTTCTGATACCAACA+TGG | + | chr3_2:9850288-9850307 | Msa0394730:CDS | 45.0% |
| GCATATCGAAGTCTCCATGT+TGG | - | chr3_2:9850305-9850324 | None:intergenic | 45.0% | |
| AGAAAGGCTGACCAAATAGG+AGG | + | chr3_2:9850406-9850425 | Msa0394730:CDS | 45.0% | |
| ! | TGTTGCTGCTTCCTCCTATT+TGG | - | chr3_2:9850420-9850439 | None:intergenic | 45.0% |
| ! | GTGATCTGATTTGCAACAGC+AGG | - | chr3_2:9850529-9850548 | None:intergenic | 45.0% |
| TACCATGCAGGTAATGACTC+AGG | + | chr3_2:9850916-9850935 | Msa0394730:intron | 45.0% | |
| ACCAACATGATTCCAACTCC+TGG | + | chr3_2:9851030-9851049 | Msa0394730:CDS | 45.0% | |
| TCCAGGAGTTGGAATCATGT+TGG | - | chr3_2:9851034-9851053 | None:intergenic | 45.0% | |
| !! | CCATTTGAGGCTGCATGTTT+TGG | - | chr3_2:9851062-9851081 | None:intergenic | 45.0% |
| CCAAAACATGCAGCCTCAAA+TGG | + | chr3_2:9851059-9851078 | Msa0394730:CDS | 45.0% | |
| !!! | AAATAAAATTTTTTTTTTAC+AGG | + | chr3_2:9848109-9848128 | Msa0394730:intron | 5.0% |
| !!! | AATAAAATTTTTTTTTTACA+GGG | + | chr3_2:9848110-9848129 | Msa0394730:intron | 5.0% |
| !! | CATCCCAACGTTGATAACGG+TGG | + | chr3_2:9847046-9847065 | Msa0394730:CDS | 50.0% |
| GCACCACCGTTATCAACGTT+GGG | - | chr3_2:9847052-9847071 | None:intergenic | 50.0% | |
| AGCACCACCGTTATCAACGT+TGG | - | chr3_2:9847053-9847072 | None:intergenic | 50.0% | |
| ACAATGGCTCGTGCACAAGA+GGG | + | chr3_2:9847250-9847269 | Msa0394730:CDS | 50.0% | |
| ! | AATTTCTCTAGCTTCGCCGC+TGG | + | chr3_2:9848245-9848264 | Msa0394730:intron | 50.0% |
| GGAGAGAAGGGAGAAAAGAG+AGG | + | chr3_2:9848764-9848783 | Msa0394730:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr3_2:9848817-9848836 | Msa0394730:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr3_2:9848818-9848837 | Msa0394730:intron | 50.0% | |
| GAGAGAGAGACGAAGAGAGA+AGG | + | chr3_2:9848871-9848890 | Msa0394730:intron | 50.0% | |
| AGAGAGGAGGGAGAAAAGAG+AGG | + | chr3_2:9848905-9848924 | Msa0394730:intron | 50.0% | |
| GAGGGAGAAAAGAGAGGAGA+GGG | + | chr3_2:9848911-9848930 | Msa0394730:intron | 50.0% | |
| GAGAAAAGAGAGGAGAGGGA+AGG | + | chr3_2:9848915-9848934 | Msa0394730:intron | 50.0% | |
| CAGCACATGTCAGCTCAATG+GGG | - | chr3_2:9849532-9849551 | None:intergenic | 50.0% | |
| CACAGCACATGTCAGCTCAA+TGG | - | chr3_2:9849534-9849553 | None:intergenic | 50.0% | |
| CATTGAGCTGACATGTGCTG+TGG | + | chr3_2:9849532-9849551 | Msa0394730:intron | 50.0% | |
| GATGTTCGTGGCTTCGTCTA+TGG | + | chr3_2:9849587-9849606 | Msa0394730:CDS | 50.0% | |
| GGCTCTTCGGAAAATCTACG+CGG | + | chr3_2:9849641-9849660 | Msa0394730:CDS | 50.0% | |
| CTTCGGAAAATCTACGCGGT+TGG | + | chr3_2:9849645-9849664 | Msa0394730:CDS | 50.0% | |
| !! | AAATCTACGCGGTTGGTGGA+AGG | + | chr3_2:9849652-9849671 | Msa0394730:CDS | 50.0% |
| CACCATGATTCGTTCCCTGT+TGG | - | chr3_2:9849908-9849927 | None:intergenic | 50.0% | |
| CAACAGGGAACGAATCATGG+TGG | + | chr3_2:9849906-9849925 | Msa0394730:CDS | 50.0% | |
| ! | AGGGAACGAATCATGGTGGA+AGG | + | chr3_2:9849910-9849929 | Msa0394730:CDS | 50.0% |
| ! | GCTTGCTGATGTTGGTCAAG+AGG | - | chr3_2:9850499-9850518 | None:intergenic | 50.0% |
| !! | GTACTGCAGCTTGCTGATGT+TGG | - | chr3_2:9850507-9850526 | None:intergenic | 50.0% |
| CTCCTGAGTCATTACCTGCA+TGG | - | chr3_2:9850921-9850940 | None:intergenic | 50.0% | |
| GCAGGTAATGACTCAGGAGA+AGG | + | chr3_2:9850922-9850941 | Msa0394730:intron | 50.0% | |
| TGGCACAACATGATTCACGG+TGG | - | chr3_2:9851007-9851026 | None:intergenic | 50.0% | |
| GACAATGGCTCGTGCACAAG+AGG | + | chr3_2:9847249-9847268 | Msa0394730:CDS | 55.0% | |
| ! | AAGGTCTGGGGTTCAAACCC+CGG | - | chr3_2:9847474-9847493 | None:intergenic | 55.0% |
| GATAGAGAGAGGGGGAAGAG+AGG | + | chr3_2:9848739-9848758 | Msa0394730:intron | 55.0% | |
| GGAAGAGAGGAGGGAGAGAA+GGG | + | chr3_2:9848752-9848771 | Msa0394730:intron | 55.0% | |
| AGAGAGAGAGAGAGAGAGGG+AGG | + | chr3_2:9848829-9848848 | Msa0394730:intron | 55.0% | |
| GAGAGAGAGAGAGAGAGGGA+GGG | + | chr3_2:9848830-9848849 | Msa0394730:intron | 55.0% | |
| AGAGGGAGGGAGAAGAGAGA+GGG | + | chr3_2:9848843-9848862 | Msa0394730:intron | 55.0% | |
| GAAGGGAGAGAGAGAGAGAG+AGG | + | chr3_2:9848889-9848908 | Msa0394730:intron | 55.0% | |
| GGAGAGAGAGAGAGAGAGGA+GGG | + | chr3_2:9848893-9848912 | Msa0394730:intron | 55.0% | |
| GGAGGGAGAAAAGAGAGGAG+AGG | + | chr3_2:9848910-9848929 | Msa0394730:intron | 55.0% | |
| GAGGGAAGGGAGAAGAGAGA+AGG | + | chr3_2:9848929-9848948 | Msa0394730:intron | 55.0% | |
| AGCTGACATGTGCTGTGGAC+AGG | + | chr3_2:9849537-9849556 | Msa0394730:intron | 55.0% | |
| CGGAAAATCTACGCGGTTGG+TGG | + | chr3_2:9849648-9849667 | Msa0394730:CDS | 55.0% | |
| !! | GGAGGAATGCCGCTTTCCAA+AGG | - | chr3_2:9849875-9849894 | None:intergenic | 55.0% |
| AAAGCGGCATTCCTCCACCA+TGG | + | chr3_2:9849879-9849898 | Msa0394730:CDS | 55.0% | |
| GGCCAACAGGGAACGAATCA+TGG | + | chr3_2:9849903-9849922 | Msa0394730:CDS | 55.0% | |
| AGAGAGAGGGGGAAGAGAGG+AGG | + | chr3_2:9848742-9848761 | Msa0394730:intron | 60.0% | |
| GAGAGAGGGGGAAGAGAGGA+GGG | + | chr3_2:9848743-9848762 | Msa0394730:intron | 60.0% | |
| GGGAAGAGAGGAGGGAGAGA+AGG | + | chr3_2:9848751-9848770 | Msa0394730:intron | 60.0% | |
| GAGAGGGAGGGAGAAGAGAG+AGG | + | chr3_2:9848842-9848861 | Msa0394730:intron | 60.0% | |
| GAGGGAGGGAGAAGAGAGAG+GGG | + | chr3_2:9848844-9848863 | Msa0394730:intron | 60.0% | |
| GGGAGAGAGAGAGAGAGAGG+AGG | + | chr3_2:9848892-9848911 | Msa0394730:intron | 60.0% | |
| CTCCACCATGGTGGCCAACA+GGG | + | chr3_2:9849891-9849910 | Msa0394730:CDS | 60.0% | |
| TTCCCTGTTGGCCACCATGG+TGG | - | chr3_2:9849896-9849915 | None:intergenic | 60.0% | |
| TCGTTCCCTGTTGGCCACCA+TGG | - | chr3_2:9849899-9849918 | None:intergenic | 60.0% | |
| GCGGCATTCCTCCACCATGG+TGG | + | chr3_2:9849882-9849901 | Msa0394730:CDS | 65.0% | |
| CCTGTTGGCCACCATGGTGG+AGG | - | chr3_2:9849893-9849912 | None:intergenic | 65.0% | |
| CCTCCACCATGGTGGCCAAC+AGG | + | chr3_2:9849890-9849909 | Msa0394730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 9847043 | 9851326 | 9847043 | ID=Msa0394730;Name=Msa0394730 |
| chr3_2 | mRNA | 9847043 | 9851326 | 9847043 | ID=Msa0394730-mRNA-1;Parent=Msa0394730;Name=Msa0394730-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|546 |
| chr3_2 | exon | 9847043 | 9847281 | 9847043 | ID=Msa0394730-mRNA-1:exon:2549;Parent=Msa0394730-mRNA-1 |
| chr3_2 | exon | 9849559 | 9850559 | 9849559 | ID=Msa0394730-mRNA-1:exon:2550;Parent=Msa0394730-mRNA-1 |
| chr3_2 | exon | 9850926 | 9851326 | 9850926 | ID=Msa0394730-mRNA-1:exon:2551;Parent=Msa0394730-mRNA-1 |
| chr3_2 | CDS | 9847043 | 9847281 | 9847043 | ID=Msa0394730-mRNA-1:cds;Parent=Msa0394730-mRNA-1 |
| chr3_2 | CDS | 9849559 | 9850559 | 9849559 | ID=Msa0394730-mRNA-1:cds;Parent=Msa0394730-mRNA-1 |
| chr3_2 | CDS | 9850926 | 9851326 | 9850926 | ID=Msa0394730-mRNA-1:cds;Parent=Msa0394730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
