AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0395240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395240 MtrunA17_Chr3g0080761 95.789 665 21 4 1 659 1 664 0.0 1317
Msa0395240 MtrunA17_Chr8g0354821 59.797 689 227 9 15 658 4 687 0.0 842
Msa0395240 MtrunA17_Chr7g0255181 46.658 733 287 18 1 658 1 704 0.0 631
Msa0395240 MtrunA17_Chr5g0399801 41.713 537 291 13 125 656 567 1086 1.80e-122 390
Msa0395240 MtrunA17_Chr4g0003501 40.678 531 290 15 133 658 444 954 1.28e-114 366
Msa0395240 MtrunA17_Chr4g0003511 39.889 539 301 14 125 658 531 1051 5.47e-113 363
Msa0395240 MtrunA17_Chr8g0368911 40.546 476 251 12 172 631 290 749 9.69e-110 348
Msa0395240 MtrunA17_Chr8g0368901 41.239 468 255 12 174 631 299 756 1.54e-109 348
Msa0395240 MtrunA17_Chr1g0163051 37.058 537 299 14 108 631 135 645 1.89e-106 337
Msa0395240 MtrunA17_Chr8g0369301 40.179 448 247 9 194 631 300 736 4.02e-104 333
Msa0395240 MtrunA17_Chr6g0476111 36.986 511 281 14 171 655 195 690 2.06e-96 311
Msa0395240 MtrunA17_Chr6g0476121 36.204 511 285 14 171 655 144 639 7.67e-94 303
Msa0395240 MtrunA17_Chr7g0252211 36.759 506 294 11 169 655 255 753 3.46e-92 301
Msa0395240 MtrunA17_Chr1g0163041 34.570 512 301 14 139 631 68 564 5.12e-91 294
Msa0395240 MtrunA17_Chr6g0467381 34.667 525 290 14 139 631 60 563 1.34e-89 290
Msa0395240 MtrunA17_Chr6g0467531 34.535 527 292 14 139 633 60 565 4.29e-89 288
Msa0395240 MtrunA17_Chr6g0467421 34.476 525 291 14 139 631 60 563 7.57e-89 288
Msa0395240 MtrunA17_Chr6g0467401 34.345 527 293 14 139 633 60 565 1.48e-87 284
Msa0395240 MtrunA17_Chr3g0094881 35.098 510 291 14 135 633 144 624 5.44e-84 277
Msa0395240 MtrunA17_Chr6g0467411 32.520 492 280 14 155 633 31 483 4.10e-71 238
Msa0395240 MtrunA17_Chr2g0306961 31.641 512 277 11 139 633 9 464 6.87e-70 234
Msa0395240 MtrunA17_Chr1g0170651 33.607 488 266 12 189 658 98 545 4.96e-66 227
Msa0395240 MtrunA17_Chr7g0232811 29.670 546 272 18 135 654 75 534 2.92e-61 213
Msa0395240 MtrunA17_Chr7g0232981 29.301 529 273 18 135 654 75 511 1.38e-54 194
Msa0395240 MtrunA17_Chr7g0232841 28.885 547 261 21 135 654 78 523 2.66e-52 189
Msa0395240 MtrunA17_Chr5g0403241 31.193 327 174 9 363 658 1200 1506 1.40e-32 135
Msa0395240 MtrunA17_Chr1g0190311 27.811 338 168 11 372 655 325 640 5.18e-31 129
Msa0395240 MtrunA17_Chr8g0373821 29.193 322 177 9 359 654 237 533 5.56e-29 121
Msa0395240 MtrunA17_Chr1g0183321 28.743 334 169 10 372 655 428 742 3.06e-28 120
Msa0395240 MtrunA17_Chr4g0075321 34.703 219 114 4 445 658 869 1063 4.77e-28 120
Msa0395240 MtrunA17_Chr7g0262001 28.049 328 173 7 374 655 388 698 1.15e-25 112
Msa0395240 MtrunA17_Chr1g0201621 30.928 194 98 6 462 654 61 219 1.49e-17 85.9
Msa0395240 MtrunA17_Chr1g0201311 30.928 194 98 6 462 654 61 219 2.78e-17 85.1
Msa0395240 MtrunA17_Chr7g0232751 37.963 108 63 2 549 654 9 114 2.21e-16 75.9
Msa0395240 MtrunA17_Chr6g0477001 27.670 206 95 5 459 655 87 247 2.37e-15 77.8
Msa0395240 MtrunA17_Chr2g0305371 30.928 194 96 5 463 656 314 469 2.57e-15 79.3
Msa0395240 MtrunA17_Chr2g0297191 28.977 176 89 5 483 658 1031 1170 2.91e-13 73.6
Msa0395240 MtrunA17_Chr7g0232761 32.867 143 77 6 192 329 141 269 8.15e-12 66.2
Msa0395240 MtrunA17_Chr7g0232871 38.667 75 39 2 477 547 16 87 2.75e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395240 AT5G04940.2 56.419 592 235 8 70 658 98 669 0.0 684
Msa0395240 AT5G04940.1 56.419 592 235 8 70 658 98 669 0.0 684
Msa0395240 AT1G73100.1 51.180 678 291 10 6 658 6 668 0.0 682
Msa0395240 AT1G17770.1 43.523 579 291 12 98 659 134 693 9.77e-155 463
Msa0395240 AT2G24740.1 44.917 541 249 14 129 658 252 754 5.90e-148 447
Msa0395240 AT2G35160.5 38.031 589 306 19 80 658 218 757 1.54e-111 353
Msa0395240 AT2G35160.2 38.031 589 306 19 80 658 254 793 3.44e-111 353
Msa0395240 AT2G35160.3 38.031 589 306 19 80 658 254 793 3.44e-111 353
Msa0395240 AT2G35160.1 38.031 589 306 19 80 658 254 793 3.44e-111 353
Msa0395240 AT2G35160.4 38.031 589 306 19 80 658 254 793 3.44e-111 353
Msa0395240 AT4G13460.1 38.614 505 286 11 139 631 145 637 4.03e-107 338
Msa0395240 AT4G13460.2 38.614 505 286 11 139 631 145 637 4.03e-107 338
Msa0395240 AT2G22740.2 37.782 532 301 13 139 655 270 786 2.47e-106 340
Msa0395240 AT2G22740.1 37.782 532 301 13 139 655 270 786 2.47e-106 340
Msa0395240 AT2G33290.1 38.417 518 285 9 139 640 149 648 7.98e-106 335
Msa0395240 AT2G33290.3 38.417 518 285 9 139 640 149 648 7.98e-106 335
Msa0395240 AT2G33290.4 38.417 518 285 9 139 640 149 648 7.98e-106 335
Msa0395240 AT2G33290.2 38.417 518 285 9 139 640 149 648 7.98e-106 335
Msa0395240 AT5G13960.2 36.626 486 275 14 192 655 12 486 9.42e-92 293
Msa0395240 AT5G13960.1 35.686 510 295 14 168 655 122 620 8.31e-91 295
Msa0395240 AT2G05900.1 41.176 221 121 4 212 428 1 216 4.28e-45 163
Msa0395240 AT2G05900.1 56.098 82 30 1 577 658 236 311 1.70e-22 99.4
Msa0395240 AT5G47150.1 41.589 214 113 5 139 347 118 324 2.21e-41 154
Msa0395240 AT3G04380.2 28.012 332 174 8 372 655 117 431 4.01e-36 142
Msa0395240 AT3G04380.1 28.012 332 174 8 372 655 144 458 4.42e-36 142
Msa0395240 AT3G04380.3 28.012 332 174 8 372 655 128 442 4.60e-36 142
Msa0395240 AT3G04380.6 28.012 332 174 8 372 655 117 431 5.46e-36 141
Msa0395240 AT3G04380.4 28.012 332 174 8 372 655 144 458 6.03e-36 142
Msa0395240 AT3G04380.5 28.012 332 174 8 372 655 101 415 6.48e-36 141
Msa0395240 AT5G47160.1 37.549 253 137 8 103 344 166 408 1.96e-34 136
Msa0395240 AT5G47160.3 37.549 253 137 8 103 344 166 408 1.96e-34 136
Msa0395240 AT5G47160.2 37.549 253 137 8 103 344 166 408 1.96e-34 136
Msa0395240 AT2G23740.3 32.288 319 166 15 368 659 1087 1382 2.11e-32 135
Msa0395240 AT2G23740.6 32.288 319 166 15 368 659 1087 1382 2.11e-32 135
Msa0395240 AT2G23740.2 32.288 319 166 15 368 659 1087 1382 2.11e-32 135
Msa0395240 AT2G23740.1 32.288 319 166 15 368 659 1080 1375 2.19e-32 135
Msa0395240 AT1G04050.3 30.539 334 161 13 372 655 303 615 1.15e-31 131
Msa0395240 AT1G04050.2 31.045 335 160 14 372 656 407 720 1.30e-31 131
Msa0395240 AT1G04050.1 31.045 335 160 14 372 656 407 720 1.30e-31 131
Msa0395240 AT5G43990.3 28.698 338 159 13 372 655 393 702 4.91e-29 123
Msa0395240 AT5G43990.11 28.698 338 159 13 372 655 393 702 4.91e-29 123
Msa0395240 AT5G43990.1 28.698 338 159 13 372 655 393 702 4.91e-29 123
Msa0395240 AT5G43990.4 28.698 338 159 13 372 655 393 702 4.91e-29 123
Msa0395240 AT5G43990.7 28.698 338 159 13 372 655 304 613 5.25e-29 123
Msa0395240 AT5G43990.15 28.698 338 159 13 372 655 396 705 5.66e-29 123
Msa0395240 AT5G43990.10 28.698 338 159 13 372 655 396 705 5.66e-29 123
Msa0395240 AT5G43990.16 28.698 338 159 13 372 655 373 682 5.83e-29 123
Msa0395240 AT5G43990.5 28.698 338 159 13 372 655 373 682 5.83e-29 123
Msa0395240 AT5G43990.17 28.698 338 159 13 372 655 373 682 5.83e-29 123
Msa0395240 AT5G43990.14 28.698 338 159 13 372 655 373 682 5.83e-29 123
Msa0395240 AT5G43990.9 28.698 338 159 13 372 655 416 725 6.52e-29 123
Msa0395240 AT5G43990.2 28.698 338 159 13 372 655 416 725 6.52e-29 123
Msa0395240 AT5G43990.8 28.698 338 159 13 372 655 324 633 7.20e-29 122
Msa0395240 AT5G43990.12 28.698 338 159 13 372 655 324 633 7.20e-29 122
Msa0395240 AT5G43990.6 28.698 338 159 13 372 655 324 633 7.20e-29 122
Msa0395240 AT5G43990.13 28.698 338 159 13 372 655 324 633 7.20e-29 122
Msa0395240 AT3G03750.2 32.743 226 129 7 435 658 145 349 2.90e-24 105
Msa0395240 AT2G23740.4 32.530 249 120 14 368 589 1087 1314 1.08e-20 97.8
Msa0395240 AT2G23740.5 32.530 249 120 14 368 589 1087 1314 1.08e-20 97.8
Msa0395240 AT3G03750.1 29.464 224 123 7 435 658 145 333 8.33e-18 85.9
Msa0395240 AT1G77300.2 30.890 191 98 5 466 656 1008 1164 2.62e-16 84.0
Msa0395240 AT1G77300.1 30.890 191 98 5 466 656 1008 1164 3.62e-16 83.6
Msa0395240 AT4G30860.1 29.897 194 98 5 463 656 307 462 7.28e-14 75.1
Msa0395240 AT3G59960.3 28.333 180 75 6 485 655 112 246 5.15e-12 67.4
Msa0395240 AT3G59960.2 28.333 180 75 6 485 655 112 246 5.15e-12 67.4
Msa0395240 AT3G59960.4 28.333 180 75 6 485 655 112 246 5.15e-12 67.4
Msa0395240 AT3G59960.1 28.333 180 75 6 485 655 112 246 1.74e-11 66.6

Find 166 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGGTCAGTATCCTTC+TGG 0.204050 3_2:+11672748 Msa0395240:CDS
ACAGGTATCAAACTTCTTAT+AGG 0.235001 3_2:-11672700 None:intergenic
CGACTCCACTTCAAGCATTT+AGG 0.258428 3_2:+11672839 Msa0395240:CDS
CAAGCATTTAGGAGCCCTTT+TGG 0.274971 3_2:+11672850 Msa0395240:CDS
CATTGACAAGTATAAGATTC+TGG 0.293840 3_2:+11672669 Msa0395240:CDS
AGAGTGGAAATATGTGAAAA+AGG 0.306165 3_2:-11673814 None:intergenic
TGCATTAAACTGAATGATTT+CGG 0.306178 3_2:-11673846 None:intergenic
CATGAGTTAACATATGATTA+TGG 0.312052 3_2:+11674494 Msa0395240:CDS
TTCTTAGCATTTATAATAAG+AGG 0.346128 3_2:-11674338 None:intergenic
AGCATGTGTCCCTGGCGATT+TGG 0.346957 3_2:+11673902 Msa0395240:CDS
TGTATAAAATTCAAGATTCA+TGG 0.349797 3_2:+11673580 Msa0395240:CDS
AGAACTCCATTGATAATATA+CGG 0.356399 3_2:-11673960 None:intergenic
CGAATGGAAATGTGTGTTAT+CGG 0.357207 3_2:+11673249 Msa0395240:CDS
CTTCAGGTCAGTATCCTTCT+GGG 0.359790 3_2:+11672749 Msa0395240:CDS
AACCTAGTGCCTTTGCCGTT+TGG 0.360454 3_2:+11673664 Msa0395240:CDS
GTATATTATCAATGGAGTTC+TGG 0.362491 3_2:+11673962 Msa0395240:CDS
TTTGGTGCTTCAAACCGGTT+TGG 0.365259 3_2:-11674058 None:intergenic
AGGATAAAGGTTGGGGTCTT+CGG 0.367552 3_2:+11674099 Msa0395240:CDS
TCATAAGGGTAATCTTGCTT+TGG 0.385063 3_2:+11673464 Msa0395240:CDS
CAAAACAAAGGATAAAGGTT+GGG 0.388648 3_2:+11674091 Msa0395240:CDS
TTGGTGCTTCAAACCGGTTT+GGG 0.391461 3_2:-11674057 None:intergenic
AATCCTCAAGGTCAATCTTC+AGG 0.392097 3_2:+11672733 Msa0395240:CDS
TGTTATAATTTATACCGGTC+AGG 0.396575 3_2:+11673395 Msa0395240:CDS
TGTGTTTGTTCGAATTCCTT+TGG 0.402301 3_2:-11673172 None:intergenic
GATTGATGCCTTGCATATCC+AGG 0.403598 3_2:+11673296 Msa0395240:CDS
ACTTGAAAGATTCATAAATA+CGG 0.407062 3_2:-11674244 None:intergenic
CGAACCTGTGTTCCATTCCT+TGG 0.409287 3_2:-11673109 None:intergenic
CAGTACCTGGAGTTGAGATT+GGG 0.418871 3_2:+11673211 Msa0395240:CDS
ACAGGCTGCCAGAAAACATT+TGG 0.419329 3_2:-11674401 None:intergenic
ATTTGGACTGCTCATGCATT+CGG 0.422721 3_2:+11673919 Msa0395240:CDS
TACCATTGTCTCTTTGACCT+GGG 0.423334 3_2:-11673014 None:intergenic
TCAGTACCTGGAGTTGAGAT+TGG 0.424381 3_2:+11673210 Msa0395240:CDS
TTCCATTTGGTGCTTCAAAC+CGG 0.425045 3_2:-11674063 None:intergenic
ATTATAAATGCTAAGAATGT+TGG 0.437154 3_2:+11674344 Msa0395240:CDS
GCTGTTAGCATTGTTTCGTC+AGG 0.439867 3_2:+11673342 Msa0395240:CDS
AGAATAAGTCCAGTCCTTGC+AGG 0.449322 3_2:-11673717 None:intergenic
AAGGTTGGGGTCTTCGGTCA+TGG 0.451618 3_2:+11674105 Msa0395240:CDS
GCTGGTTTCCCTGCAAGGAC+TGG 0.456055 3_2:+11673708 Msa0395240:CDS
ATAAAAGCACCAGCACGAAT+AGG 0.460396 3_2:-11674131 None:intergenic
TTACCATTGTCTCTTTGACC+TGG 0.461172 3_2:-11673015 None:intergenic
GTGTTCAAAACAAAGGATAA+AGG 0.462890 3_2:+11674086 Msa0395240:CDS
GTGAATTGTATAATGGAAGA+AGG 0.464015 3_2:+11672613 None:intergenic
CGGTTTGCATGCTCAATCGA+TGG 0.470289 3_2:+11673269 Msa0395240:CDS
CGATAACACACATTTCCATT+CGG 0.476797 3_2:-11673248 None:intergenic
TATTCTTGCTGACCTCTCCT+CGG 0.477270 3_2:+11673734 Msa0395240:CDS
AGATCCTCATCCTCTCCAAA+AGG 0.481832 3_2:-11672865 None:intergenic
GTATCATGAGGTCCACCAAA+TGG 0.483316 3_2:-11672787 None:intergenic
CTTGAAAGATTCATAAATAC+GGG 0.486596 3_2:-11674243 None:intergenic
ACTTCATTGACAAGTGATAC+AGG 0.486649 3_2:-11673771 None:intergenic
GTCAGATCAGAAGCTTCATA+AGG 0.487005 3_2:+11673449 Msa0395240:CDS
CATGAGCAGTCCAAATCGCC+AGG 0.488074 3_2:-11673912 None:intergenic
GTTGATATGAGTGGTTTAGT+TGG 0.492160 3_2:+11672985 Msa0395240:CDS
TGTATAATGGAAGAAGGGTT+AGG 0.492317 3_2:+11672619 None:intergenic
TTGTTCTCTTCATATAAGAC+AGG 0.494732 3_2:-11674419 None:intergenic
CAGAATCTTATACTTGTCAA+TGG 0.495015 3_2:-11672668 None:intergenic
TCAATGGAGTTCTGGCAAAT+CGG 0.496623 3_2:+11673970 Msa0395240:CDS
GCACAATATTAACAACTTCA+CGG 0.500326 3_2:-11673038 None:intergenic
TGCATATCCAGGGTGACCGC+GGG 0.500357 3_2:+11673307 Msa0395240:CDS
TCACAGCATCTTTGATGCCT+CGG 0.503981 3_2:-11673524 None:intergenic
GGTTTGCATGCTCAATCGAT+GGG 0.505325 3_2:+11673270 Msa0395240:CDS
TATCATGAGGTCCACCAAAT+GGG 0.505449 3_2:-11672786 None:intergenic
AACCGGTTTGAAGCACCAAA+TGG 0.508329 3_2:+11674061 Msa0395240:CDS
TCTGTTCAGAAGTGGAAAGC+TGG 0.508734 3_2:+11673690 Msa0395240:CDS
TCATGGGATCCTATTCGTGC+TGG 0.510420 3_2:+11674122 Msa0395240:CDS
ATCAAAGATGCTGTGACTCC+AGG 0.511194 3_2:+11673531 Msa0395240:CDS
GGTGATGTTATAATTTATAC+CGG 0.512209 3_2:+11673390 Msa0395240:CDS
TATCTTCCCCGCGGTCACCC+TGG 0.516259 3_2:-11673314 None:intergenic
ATTCTTGCTGACCTCTCCTC+GGG 0.517115 3_2:+11673735 Msa0395240:CDS
GTATAAAATTCAAGATTCAT+GGG 0.521482 3_2:+11673581 Msa0395240:CDS
AGGTTGGGGTCTTCGGTCAT+GGG 0.522878 3_2:+11674106 Msa0395240:CDS
TATAAGTTGATAAGAGTGCC+TGG 0.523531 3_2:+11673639 Msa0395240:CDS
TCAACACTCAGTTCCTCCCC+CGG 0.526455 3_2:+11672642 Msa0395240:CDS
TGACCGCGGGGAAGATACTT+TGG 0.527412 3_2:+11673320 Msa0395240:CDS
GGTTTAGTTGGTATAAGCCC+AGG 0.529198 3_2:+11672997 Msa0395240:CDS
AAACGTACCGATTTAAAAGC+TGG 0.530169 3_2:+11673135 Msa0395240:CDS
GTTGAAATTCCCACCCTGAC+CGG 0.530593 3_2:-11673409 None:intergenic
TCATATGTTAACTCATGCAT+TGG 0.532861 3_2:-11674488 None:intergenic
CGGCAGCATCACATTCAAGC+CGG 0.533696 3_2:+11672923 Msa0395240:CDS
TCAAAACAAAGGATAAAGGT+TGG 0.534159 3_2:+11674090 Msa0395240:CDS
GGTAGAAAGAAATGCTTATG+TGG 0.534383 3_2:+11674551 Msa0395240:CDS
TCAGATCAGAAGCTTCATAA+GGG 0.535931 3_2:+11673450 Msa0395240:CDS
ACTGCTACCCTCGGTGTGAT+CGG 0.536665 3_2:-11674519 None:intergenic
TGCATGCTCAATCGATGGGG+GGG 0.538668 3_2:+11673274 Msa0395240:CDS
TGAATTGTATAATGGAAGAA+GGG 0.540125 3_2:+11672614 None:intergenic
GGAGTCGGCATCGCTCTACT+TGG 0.540336 3_2:-11672823 None:intergenic
AAAACAAAGGATAAAGGTTG+GGG 0.541211 3_2:+11674092 Msa0395240:CDS
ATGTTAACTCATGCATTGGT+GGG 0.541447 3_2:-11674484 None:intergenic
GGCAATATTTGTATGACCAA+AGG 0.542268 3_2:+11673156 Msa0395240:CDS
GGAAAGCTGGTTTCCCTGCA+AGG 0.545796 3_2:+11673703 Msa0395240:CDS
GACTCTCGGCTCCCGAGGAG+AGG 0.546001 3_2:-11673746 None:intergenic
ATCTCAACTTGTAGATGCCA+AGG 0.547043 3_2:+11673092 Msa0395240:CDS
ATGCAACATGGAGAAAGGAT+TGG 0.548940 3_2:-11674442 None:intergenic
TTCCAAACGGCAAAGGCACT+AGG 0.550397 3_2:-11673666 None:intergenic
GATCCTCATCCTCTCCAAAA+GGG 0.552939 3_2:-11672864 None:intergenic
TTTGTGTGCACTGCTACCCT+CGG 0.552953 3_2:-11674528 None:intergenic
AACTTGTAGATGCCAAGGAA+TGG 0.553451 3_2:+11673097 Msa0395240:CDS
TTTGGAAATCTGTTCAGAAG+TGG 0.553589 3_2:+11673682 Msa0395240:CDS
ATGTCCCCAATCTCAACTCC+AGG 0.554821 3_2:-11673216 None:intergenic
TCTTAGCATTTATAATAAGA+GGG 0.554977 3_2:-11674337 None:intergenic
GGCAGCATCACATTCAAGCC+GGG 0.555680 3_2:+11672924 Msa0395240:CDS
GTATTTATGAATCTTTCAAG+TGG 0.556979 3_2:+11674246 Msa0395240:CDS
GCAAAGGCACTAGGTTGTCC+AGG 0.558915 3_2:-11673657 None:intergenic
TTATACTTGTCAATGGAACC+CGG 0.562427 3_2:-11672661 None:intergenic
GGTCAGATTGAAGAAGCATA+AGG 0.562915 3_2:+11672945 Msa0395240:CDS
TCACATAGTTGCAGCTGTAG+TGG 0.565201 3_2:+11673873 Msa0395240:CDS
GCATTTATAATAAGAGGGTG+TGG 0.566087 3_2:-11674332 None:intergenic
CTAAATGCTTGAAGTGGAGT+CGG 0.566439 3_2:-11672838 None:intergenic
GAGAAGTTATCGATAAAGCT+AGG 0.566713 3_2:+11674168 Msa0395240:CDS
GTTATAATTTATACCGGTCA+GGG 0.567735 3_2:+11673396 Msa0395240:CDS
TTGCATGCTCAATCGATGGG+GGG 0.569075 3_2:+11673273 Msa0395240:CDS
ATTTCGGATGTCTAAGAGAG+TGG 0.569188 3_2:-11673830 None:intergenic
AAGCCGTTGGTTCATGAATG+TGG 0.569854 3_2:+11673993 Msa0395240:CDS
TTTGCATGCTCAATCGATGG+GGG 0.571740 3_2:+11673272 Msa0395240:CDS
GAGGATCTCAATGACAATGA+TGG 0.572099 3_2:+11672880 Msa0395240:CDS
TATGCTTCTTCAATCTGACC+CGG 0.573333 3_2:-11672942 None:intergenic
TATGTTAACTCATGCATTGG+TGG 0.574648 3_2:-11674485 None:intergenic
TCGAACAAACACAGCGAAGA+GGG 0.575127 3_2:+11673182 Msa0395240:CDS
TTGCATATCCAGGGTGACCG+CGG 0.575259 3_2:+11673306 Msa0395240:CDS
GTTTGCATGCTCAATCGATG+GGG 0.580565 3_2:+11673271 Msa0395240:CDS
GCCTAAGTTACTAGAAGAAG+CGG 0.581948 3_2:+11674277 Msa0395240:CDS
AACAGATTTCCAAACGGCAA+AGG 0.589578 3_2:-11673673 None:intergenic
GGGCTCCTAAATGCTTGAAG+TGG 0.589829 3_2:-11672844 None:intergenic
TCTGGCAAATCGGAAGCCGT+TGG 0.597251 3_2:+11673980 Msa0395240:CDS
AATGGAAGTGTTCAAAACAA+AGG 0.598701 3_2:+11674079 Msa0395240:CDS
CTTCTGAACAGATTTCCAAA+CGG 0.599772 3_2:-11673679 None:intergenic
TATACTTGTCAATGGAACCC+GGG 0.600215 3_2:-11672660 None:intergenic
TGACCTGAAGATTGACCTTG+AGG 0.600787 3_2:-11672736 None:intergenic
GAATAAGTCCAGTCCTTGCA+GGG 0.601962 3_2:-11673716 None:intergenic
CATTTGATGCGCTAAGACGA+AGG 0.602005 3_2:+11673067 Msa0395240:CDS
AAGAGGGTAGGATCAGTACC+TGG 0.602661 3_2:+11673198 Msa0395240:CDS
GGGCCACATTCATGAACCAA+CGG 0.610204 3_2:-11673996 None:intergenic
TGCTAAGAATGTTGGAAATG+TGG 0.613562 3_2:+11674352 Msa0395240:CDS
GATGTTCATGTTGATATGAG+TGG 0.616806 3_2:+11672976 Msa0395240:CDS
AGCCCAGGTCAAAGAGACAA+TGG 0.619161 3_2:+11673012 Msa0395240:CDS
TAATTTATACCGGTCAGGGT+GGG 0.620279 3_2:+11673400 Msa0395240:CDS
TTAGGAAAACACTGACATGT+GGG 0.620821 3_2:-11674017 None:intergenic
TACGACGATGAAGCTGAGGA+TGG 0.627250 3_2:+11673369 Msa0395240:CDS
AAGTGATACAGGAAGACTCT+CGG 0.628691 3_2:-11673760 None:intergenic
ACCGCTTCTTCTAGTAACTT+AGG 0.628944 3_2:-11674278 None:intergenic
AGGAAGACTCTCGGCTCCCG+AGG 0.629984 3_2:-11673751 None:intergenic
GCGGTCACCCTGGATATGCA+AGG 0.632039 3_2:-11673304 None:intergenic
TTAAGTCAGCTTGTACAAGA+AGG 0.632082 3_2:+11674191 Msa0395240:CDS
ACAAACACAGCGAAGAGGGT+AGG 0.634440 3_2:+11673186 Msa0395240:CDS
CTACAGCTGCAACTATGTGA+AGG 0.634477 3_2:-11673870 None:intergenic
ATACTTGTCAATGGAACCCG+GGG 0.636158 3_2:-11672659 None:intergenic
ATTGATGCCTTGCATATCCA+GGG 0.637842 3_2:+11673297 Msa0395240:CDS
GTTAGGAAAACACTGACATG+TGG 0.639912 3_2:-11674018 None:intergenic
GATGCCAAGGAATGGAACAC+AGG 0.640965 3_2:+11673105 Msa0395240:CDS
AGAATACGACGATGAAGCTG+AGG 0.645222 3_2:+11673365 Msa0395240:CDS
TTCGAACAAACACAGCGAAG+AGG 0.646517 3_2:+11673181 Msa0395240:CDS
TATGGTTCCGATCACACCGA+GGG 0.656242 3_2:+11674512 Msa0395240:CDS
AGTACCTGGAGTTGAGATTG+GGG 0.657916 3_2:+11673212 Msa0395240:CDS
TCATGCATTCGGAGAAACGA+AGG 0.659918 3_2:+11673930 Msa0395240:CDS
TTTGCAGTTGAAGTATCATG+AGG 0.660591 3_2:-11672799 None:intergenic
ATAATTTATACCGGTCAGGG+TGG 0.675305 3_2:+11673399 Msa0395240:CDS
TGTGGATCATCAAACTGCCG+CGG 0.682422 3_2:+11674569 Msa0395240:CDS
ATGAGCAGTCCAAATCGCCA+GGG 0.685642 3_2:-11673911 None:intergenic
TAGGAAAACACTGACATGTG+GGG 0.688446 3_2:-11674016 None:intergenic
GGTCACAAATGAGTCTAGTG+AGG 0.690764 3_2:+11674298 Msa0395240:CDS
GCATATCCAGGGTGACCGCG+GGG 0.702296 3_2:+11673308 Msa0395240:CDS
GAGGGTAGCAGTGCACACAA+AGG 0.714460 3_2:+11674530 Msa0395240:CDS
AATGTCAAGTAAAAGAACCG+CGG 0.738828 3_2:-11674586 None:intergenic
AATGAAATAAGAGTCATCCG+AGG 0.740934 3_2:+11673507 Msa0395240:CDS
CAGCCAAAGTATCTTCCCCG+CGG 0.752822 3_2:-11673323 None:intergenic
TTATGGTTCCGATCACACCG+AGG 0.773964 3_2:+11674511 Msa0395240:CDS
TACTTGTCAATGGAACCCGG+GGG 0.840303 3_2:-11672658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATAAAATTCAAGATTCA+TGG + chr3_2:11673580-11673599 Msa0395240:CDS 20.0%
!! GTATAAAATTCAAGATTCAT+GGG + chr3_2:11673581-11673600 Msa0395240:CDS 20.0%
!! ACTTGAAAGATTCATAAATA+CGG - chr3_2:11674247-11674266 None:intergenic 20.0%
!! TCTTAGCATTTATAATAAGA+GGG - chr3_2:11674340-11674359 None:intergenic 20.0%
!! TTCTTAGCATTTATAATAAG+AGG - chr3_2:11674341-11674360 None:intergenic 20.0%
!! ATTATAAATGCTAAGAATGT+TGG + chr3_2:11674344-11674363 Msa0395240:CDS 20.0%
!! TGTATAAAATTCAAGATTCA+TGG + chr3_2:11673580-11673599 Msa0395240:CDS 20.0%
!! GTATAAAATTCAAGATTCAT+GGG + chr3_2:11673581-11673600 Msa0395240:CDS 20.0%
!! ACTTGAAAGATTCATAAATA+CGG - chr3_2:11674247-11674266 None:intergenic 20.0%
!! TCTTAGCATTTATAATAAGA+GGG - chr3_2:11674340-11674359 None:intergenic 20.0%
!! TTCTTAGCATTTATAATAAG+AGG - chr3_2:11674341-11674360 None:intergenic 20.0%
!! ATTATAAATGCTAAGAATGT+TGG + chr3_2:11674344-11674363 Msa0395240:CDS 20.0%
!! AATATTGCCAGCTTTTAAAT+CGG - chr3_2:11673145-11673164 None:intergenic 25.0%
! GGTGATGTTATAATTTATAC+CGG + chr3_2:11673390-11673409 Msa0395240:CDS 25.0%
! TGCATTAAACTGAATGATTT+CGG - chr3_2:11673849-11673868 None:intergenic 25.0%
!! GATTTTCCGTATATTATCAA+TGG + chr3_2:11673954-11673973 Msa0395240:CDS 25.0%
!! AGAACTCCATTGATAATATA+CGG - chr3_2:11673963-11673982 None:intergenic 25.0%
! CTTGAAAGATTCATAAATAC+GGG - chr3_2:11674246-11674265 None:intergenic 25.0%
! GTATTTATGAATCTTTCAAG+TGG + chr3_2:11674246-11674265 Msa0395240:CDS 25.0%
! CATGAGTTAACATATGATTA+TGG + chr3_2:11674494-11674513 Msa0395240:CDS 25.0%
!! AATATTGCCAGCTTTTAAAT+CGG - chr3_2:11673145-11673164 None:intergenic 25.0%
! GGTGATGTTATAATTTATAC+CGG + chr3_2:11673390-11673409 Msa0395240:CDS 25.0%
! TGCATTAAACTGAATGATTT+CGG - chr3_2:11673849-11673868 None:intergenic 25.0%
!! GATTTTCCGTATATTATCAA+TGG + chr3_2:11673954-11673973 Msa0395240:CDS 25.0%
!! AGAACTCCATTGATAATATA+CGG - chr3_2:11673963-11673982 None:intergenic 25.0%
! CTTGAAAGATTCATAAATAC+GGG - chr3_2:11674246-11674265 None:intergenic 25.0%
! GTATTTATGAATCTTTCAAG+TGG + chr3_2:11674246-11674265 Msa0395240:CDS 25.0%
! CATGAGTTAACATATGATTA+TGG + chr3_2:11674494-11674513 Msa0395240:CDS 25.0%
CAGAATCTTATACTTGTCAA+TGG - chr3_2:11672671-11672690 None:intergenic 30.0%
CATTGACAAGTATAAGATTC+TGG + chr3_2:11672669-11672688 Msa0395240:CDS 30.0%
ACAGGTATCAAACTTCTTAT+AGG - chr3_2:11672703-11672722 None:intergenic 30.0%
!!! GTTTGATACCTGTTTTTTCA+AGG + chr3_2:11672710-11672729 Msa0395240:CDS 30.0%
!! TTTTCTCCATTTTTCCCATT+TGG + chr3_2:11672772-11672791 Msa0395240:CDS 30.0%
! TTTTAGCAACAAAAGAAGTG+CGG + chr3_2:11672903-11672922 Msa0395240:CDS 30.0%
GCACAATATTAACAACTTCA+CGG - chr3_2:11673041-11673060 None:intergenic 30.0%
TGTTATAATTTATACCGGTC+AGG + chr3_2:11673395-11673414 Msa0395240:CDS 30.0%
GTTATAATTTATACCGGTCA+GGG + chr3_2:11673396-11673415 Msa0395240:CDS 30.0%
GCAAAAATCTATGTCTATGA+TGG + chr3_2:11673555-11673574 Msa0395240:CDS 30.0%
AGAGTGGAAATATGTGAAAA+AGG - chr3_2:11673817-11673836 None:intergenic 30.0%
GTATATTATCAATGGAGTTC+TGG + chr3_2:11673962-11673981 Msa0395240:CDS 30.0%
!!! TTGTTTTGAACACTTCCATT+TGG - chr3_2:11674079-11674098 None:intergenic 30.0%
!! AATGGAAGTGTTCAAAACAA+AGG + chr3_2:11674079-11674098 Msa0395240:CDS 30.0%
GTGTTCAAAACAAAGGATAA+AGG + chr3_2:11674086-11674105 Msa0395240:CDS 30.0%
TCAAAACAAAGGATAAAGGT+TGG + chr3_2:11674090-11674109 Msa0395240:CDS 30.0%
CAAAACAAAGGATAAAGGTT+GGG + chr3_2:11674091-11674110 Msa0395240:CDS 30.0%
AAAACAAAGGATAAAGGTTG+GGG + chr3_2:11674092-11674111 Msa0395240:CDS 30.0%
TTGTTCTCTTCATATAAGAC+AGG - chr3_2:11674422-11674441 None:intergenic 30.0%
AAAAAATGCAACATGGAGAA+AGG - chr3_2:11674450-11674469 None:intergenic 30.0%
TCAATGCAAAAAATGCAACA+TGG - chr3_2:11674457-11674476 None:intergenic 30.0%
TCATATGTTAACTCATGCAT+TGG - chr3_2:11674491-11674510 None:intergenic 30.0%
CAGAATCTTATACTTGTCAA+TGG - chr3_2:11672671-11672690 None:intergenic 30.0%
CATTGACAAGTATAAGATTC+TGG + chr3_2:11672669-11672688 Msa0395240:CDS 30.0%
ACAGGTATCAAACTTCTTAT+AGG - chr3_2:11672703-11672722 None:intergenic 30.0%
!!! GTTTGATACCTGTTTTTTCA+AGG + chr3_2:11672710-11672729 Msa0395240:CDS 30.0%
!! TTTTCTCCATTTTTCCCATT+TGG + chr3_2:11672772-11672791 Msa0395240:CDS 30.0%
! TTTTAGCAACAAAAGAAGTG+CGG + chr3_2:11672903-11672922 Msa0395240:CDS 30.0%
GCACAATATTAACAACTTCA+CGG - chr3_2:11673041-11673060 None:intergenic 30.0%
TGTTATAATTTATACCGGTC+AGG + chr3_2:11673395-11673414 Msa0395240:CDS 30.0%
GTTATAATTTATACCGGTCA+GGG + chr3_2:11673396-11673415 Msa0395240:CDS 30.0%
GCAAAAATCTATGTCTATGA+TGG + chr3_2:11673555-11673574 Msa0395240:CDS 30.0%
AGAGTGGAAATATGTGAAAA+AGG - chr3_2:11673817-11673836 None:intergenic 30.0%
GTATATTATCAATGGAGTTC+TGG + chr3_2:11673962-11673981 Msa0395240:CDS 30.0%
!!! TTGTTTTGAACACTTCCATT+TGG - chr3_2:11674079-11674098 None:intergenic 30.0%
!! AATGGAAGTGTTCAAAACAA+AGG + chr3_2:11674079-11674098 Msa0395240:CDS 30.0%
GTGTTCAAAACAAAGGATAA+AGG + chr3_2:11674086-11674105 Msa0395240:CDS 30.0%
TCAAAACAAAGGATAAAGGT+TGG + chr3_2:11674090-11674109 Msa0395240:CDS 30.0%
CAAAACAAAGGATAAAGGTT+GGG + chr3_2:11674091-11674110 Msa0395240:CDS 30.0%
AAAACAAAGGATAAAGGTTG+GGG + chr3_2:11674092-11674111 Msa0395240:CDS 30.0%
TTGTTCTCTTCATATAAGAC+AGG - chr3_2:11674422-11674441 None:intergenic 30.0%
AAAAAATGCAACATGGAGAA+AGG - chr3_2:11674450-11674469 None:intergenic 30.0%
TCAATGCAAAAAATGCAACA+TGG - chr3_2:11674457-11674476 None:intergenic 30.0%
TCATATGTTAACTCATGCAT+TGG - chr3_2:11674491-11674510 None:intergenic 30.0%
TTATACTTGTCAATGGAACC+CGG - chr3_2:11672664-11672683 None:intergenic 35.0%
TGAGGATTCCTTGAAAAAAC+AGG - chr3_2:11672721-11672740 None:intergenic 35.0%
!!! GTTTTTTCAAGGAATCCTCA+AGG + chr3_2:11672721-11672740 Msa0395240:CDS 35.0%
AAAAATGGAGAAAACCCAGA+AGG - chr3_2:11672766-11672785 None:intergenic 35.0%
! TTTGCAGTTGAAGTATCATG+AGG - chr3_2:11672802-11672821 None:intergenic 35.0%
GATGTTCATGTTGATATGAG+TGG + chr3_2:11672976-11672995 Msa0395240:CDS 35.0%
GTTGATATGAGTGGTTTAGT+TGG + chr3_2:11672985-11673004 Msa0395240:CDS 35.0%
!! AAACGTACCGATTTAAAAGC+TGG + chr3_2:11673135-11673154 Msa0395240:CDS 35.0%
GGCAATATTTGTATGACCAA+AGG + chr3_2:11673156-11673175 Msa0395240:CDS 35.0%
TGTGTTTGTTCGAATTCCTT+TGG - chr3_2:11673175-11673194 None:intergenic 35.0%
! GGACATTTTCTTTTTCCGAA+TGG + chr3_2:11673233-11673252 Msa0395240:CDS 35.0%
CGATAACACACATTTCCATT+CGG - chr3_2:11673251-11673270 None:intergenic 35.0%
CGAATGGAAATGTGTGTTAT+CGG + chr3_2:11673249-11673268 Msa0395240:CDS 35.0%
TCAGATCAGAAGCTTCATAA+GGG + chr3_2:11673450-11673469 Msa0395240:CDS 35.0%
TCATAAGGGTAATCTTGCTT+TGG + chr3_2:11673464-11673483 Msa0395240:CDS 35.0%
AATGAAATAAGAGTCATCCG+AGG + chr3_2:11673507-11673526 Msa0395240:CDS 35.0%
! TAGACATAGATTTTTGCACC+TGG - chr3_2:11673552-11673571 None:intergenic 35.0%
! TCATGGGTTGAAAAAGCAAA+AGG + chr3_2:11673597-11673616 Msa0395240:CDS 35.0%
!! TATAAGTTGATAAGAGTGCC+TGG + chr3_2:11673639-11673658 Msa0395240:CDS 35.0%
CTTCTGAACAGATTTCCAAA+CGG - chr3_2:11673682-11673701 None:intergenic 35.0%
TTTGGAAATCTGTTCAGAAG+TGG + chr3_2:11673682-11673701 Msa0395240:CDS 35.0%
ACTTCATTGACAAGTGATAC+AGG - chr3_2:11673774-11673793 None:intergenic 35.0%
TGGAAATATGTGAAAAAGGC+AGG - chr3_2:11673813-11673832 None:intergenic 35.0%
TTAGGAAAACACTGACATGT+GGG - chr3_2:11674020-11674039 None:intergenic 35.0%
! GATACTCGATTTTTGCAGTT+AGG - chr3_2:11674038-11674057 None:intergenic 35.0%
AAAAATCGAGTATCCCAAAC+CGG + chr3_2:11674044-11674063 Msa0395240:CDS 35.0%
GAGAAGTTATCGATAAAGCT+AGG + chr3_2:11674168-11674187 Msa0395240:CDS 35.0%
TTAAGTCAGCTTGTACAAGA+AGG + chr3_2:11674191-11674210 Msa0395240:CDS 35.0%
GCATTTATAATAAGAGGGTG+TGG - chr3_2:11674335-11674354 None:intergenic 35.0%
TGCTAAGAATGTTGGAAATG+TGG + chr3_2:11674352-11674371 Msa0395240:CDS 35.0%
! ATGTTAACTCATGCATTGGT+GGG - chr3_2:11674487-11674506 None:intergenic 35.0%
TATGTTAACTCATGCATTGG+TGG - chr3_2:11674488-11674507 None:intergenic 35.0%
GGTAGAAAGAAATGCTTATG+TGG + chr3_2:11674551-11674570 Msa0395240:CDS 35.0%
TTATACTTGTCAATGGAACC+CGG - chr3_2:11672664-11672683 None:intergenic 35.0%
TGAGGATTCCTTGAAAAAAC+AGG - chr3_2:11672721-11672740 None:intergenic 35.0%
!!! GTTTTTTCAAGGAATCCTCA+AGG + chr3_2:11672721-11672740 Msa0395240:CDS 35.0%
AAAAATGGAGAAAACCCAGA+AGG - chr3_2:11672766-11672785 None:intergenic 35.0%
! TTTGCAGTTGAAGTATCATG+AGG - chr3_2:11672802-11672821 None:intergenic 35.0%
GATGTTCATGTTGATATGAG+TGG + chr3_2:11672976-11672995 Msa0395240:CDS 35.0%
GTTGATATGAGTGGTTTAGT+TGG + chr3_2:11672985-11673004 Msa0395240:CDS 35.0%
!! AAACGTACCGATTTAAAAGC+TGG + chr3_2:11673135-11673154 Msa0395240:CDS 35.0%
GGCAATATTTGTATGACCAA+AGG + chr3_2:11673156-11673175 Msa0395240:CDS 35.0%
TGTGTTTGTTCGAATTCCTT+TGG - chr3_2:11673175-11673194 None:intergenic 35.0%
! GGACATTTTCTTTTTCCGAA+TGG + chr3_2:11673233-11673252 Msa0395240:CDS 35.0%
CGATAACACACATTTCCATT+CGG - chr3_2:11673251-11673270 None:intergenic 35.0%
CGAATGGAAATGTGTGTTAT+CGG + chr3_2:11673249-11673268 Msa0395240:CDS 35.0%
TCAGATCAGAAGCTTCATAA+GGG + chr3_2:11673450-11673469 Msa0395240:CDS 35.0%
TCATAAGGGTAATCTTGCTT+TGG + chr3_2:11673464-11673483 Msa0395240:CDS 35.0%
AATGAAATAAGAGTCATCCG+AGG + chr3_2:11673507-11673526 Msa0395240:CDS 35.0%
! TAGACATAGATTTTTGCACC+TGG - chr3_2:11673552-11673571 None:intergenic 35.0%
! TCATGGGTTGAAAAAGCAAA+AGG + chr3_2:11673597-11673616 Msa0395240:CDS 35.0%
!! TATAAGTTGATAAGAGTGCC+TGG + chr3_2:11673639-11673658 Msa0395240:CDS 35.0%
CTTCTGAACAGATTTCCAAA+CGG - chr3_2:11673682-11673701 None:intergenic 35.0%
TTTGGAAATCTGTTCAGAAG+TGG + chr3_2:11673682-11673701 Msa0395240:CDS 35.0%
ACTTCATTGACAAGTGATAC+AGG - chr3_2:11673774-11673793 None:intergenic 35.0%
TGGAAATATGTGAAAAAGGC+AGG - chr3_2:11673813-11673832 None:intergenic 35.0%
TTAGGAAAACACTGACATGT+GGG - chr3_2:11674020-11674039 None:intergenic 35.0%
! GATACTCGATTTTTGCAGTT+AGG - chr3_2:11674038-11674057 None:intergenic 35.0%
AAAAATCGAGTATCCCAAAC+CGG + chr3_2:11674044-11674063 Msa0395240:CDS 35.0%
GAGAAGTTATCGATAAAGCT+AGG + chr3_2:11674168-11674187 Msa0395240:CDS 35.0%
TTAAGTCAGCTTGTACAAGA+AGG + chr3_2:11674191-11674210 Msa0395240:CDS 35.0%
GCATTTATAATAAGAGGGTG+TGG - chr3_2:11674335-11674354 None:intergenic 35.0%
TGCTAAGAATGTTGGAAATG+TGG + chr3_2:11674352-11674371 Msa0395240:CDS 35.0%
! ATGTTAACTCATGCATTGGT+GGG - chr3_2:11674487-11674506 None:intergenic 35.0%
TATGTTAACTCATGCATTGG+TGG - chr3_2:11674488-11674507 None:intergenic 35.0%
GGTAGAAAGAAATGCTTATG+TGG + chr3_2:11674551-11674570 Msa0395240:CDS 35.0%
TATACTTGTCAATGGAACCC+GGG - chr3_2:11672663-11672682 None:intergenic 40.0%
AATCCTCAAGGTCAATCTTC+AGG + chr3_2:11672733-11672752 Msa0395240:CDS 40.0%
!! TCTCCATTTTTCCCATTTGG+TGG + chr3_2:11672775-11672794 Msa0395240:CDS 40.0%
TATCATGAGGTCCACCAAAT+GGG - chr3_2:11672789-11672808 None:intergenic 40.0%
CTAAATGCTTGAAGTGGAGT+CGG - chr3_2:11672841-11672860 None:intergenic 40.0%
GAGGATCTCAATGACAATGA+TGG + chr3_2:11672880-11672899 Msa0395240:CDS 40.0%
TATGCTTCTTCAATCTGACC+CGG - chr3_2:11672945-11672964 None:intergenic 40.0%
! GGTCAGATTGAAGAAGCATA+AGG + chr3_2:11672945-11672964 Msa0395240:CDS 40.0%
TACCATTGTCTCTTTGACCT+GGG - chr3_2:11673017-11673036 None:intergenic 40.0%
TTACCATTGTCTCTTTGACC+TGG - chr3_2:11673018-11673037 None:intergenic 40.0%
ATCTCAACTTGTAGATGCCA+AGG + chr3_2:11673092-11673111 Msa0395240:CDS 40.0%
AACTTGTAGATGCCAAGGAA+TGG + chr3_2:11673097-11673116 Msa0395240:CDS 40.0%
ATTGATGCCTTGCATATCCA+GGG + chr3_2:11673297-11673316 Msa0395240:CDS 40.0%
ATAATTTATACCGGTCAGGG+TGG + chr3_2:11673399-11673418 Msa0395240:CDS 40.0%
TAATTTATACCGGTCAGGGT+GGG + chr3_2:11673400-11673419 Msa0395240:CDS 40.0%
GTCAGATCAGAAGCTTCATA+AGG + chr3_2:11673449-11673468 Msa0395240:CDS 40.0%
! TGGGTTGAAAAAGCAAAAGG+AGG + chr3_2:11673600-11673619 Msa0395240:CDS 40.0%
GTTGAAAAAGCAAAAGGAGG+TGG + chr3_2:11673603-11673622 Msa0395240:CDS 40.0%
AACAGATTTCCAAACGGCAA+AGG - chr3_2:11673676-11673695 None:intergenic 40.0%
AAGTGATACAGGAAGACTCT+CGG - chr3_2:11673763-11673782 None:intergenic 40.0%
ATTTCGGATGTCTAAGAGAG+TGG - chr3_2:11673833-11673852 None:intergenic 40.0%
ATTTGGACTGCTCATGCATT+CGG + chr3_2:11673919-11673938 Msa0395240:CDS 40.0%
! TCAATGGAGTTCTGGCAAAT+CGG + chr3_2:11673970-11673989 Msa0395240:CDS 40.0%
TAGGAAAACACTGACATGTG+GGG - chr3_2:11674019-11674038 None:intergenic 40.0%
GTTAGGAAAACACTGACATG+TGG - chr3_2:11674021-11674040 None:intergenic 40.0%
!! TTCCATTTGGTGCTTCAAAC+CGG - chr3_2:11674066-11674085 None:intergenic 40.0%
!! ATAAAAGCACCAGCACGAAT+AGG - chr3_2:11674134-11674153 None:intergenic 40.0%
!! GCTTTTATTTGCGAGTATGC+AGG + chr3_2:11674146-11674165 Msa0395240:CDS 40.0%
GCCTAAGTTACTAGAAGAAG+CGG + chr3_2:11674277-11674296 Msa0395240:CDS 40.0%
ACCGCTTCTTCTAGTAACTT+AGG - chr3_2:11674281-11674300 None:intergenic 40.0%
! GTTGCTCTCCAAATGTTTTC+TGG + chr3_2:11674393-11674412 Msa0395240:CDS 40.0%
ATGCAACATGGAGAAAGGAT+TGG - chr3_2:11674445-11674464 None:intergenic 40.0%
TATACTTGTCAATGGAACCC+GGG - chr3_2:11672663-11672682 None:intergenic 40.0%
AATCCTCAAGGTCAATCTTC+AGG + chr3_2:11672733-11672752 Msa0395240:CDS 40.0%
!! TCTCCATTTTTCCCATTTGG+TGG + chr3_2:11672775-11672794 Msa0395240:CDS 40.0%
TATCATGAGGTCCACCAAAT+GGG - chr3_2:11672789-11672808 None:intergenic 40.0%
CTAAATGCTTGAAGTGGAGT+CGG - chr3_2:11672841-11672860 None:intergenic 40.0%
GAGGATCTCAATGACAATGA+TGG + chr3_2:11672880-11672899 Msa0395240:CDS 40.0%
TATGCTTCTTCAATCTGACC+CGG - chr3_2:11672945-11672964 None:intergenic 40.0%
! GGTCAGATTGAAGAAGCATA+AGG + chr3_2:11672945-11672964 Msa0395240:CDS 40.0%
TACCATTGTCTCTTTGACCT+GGG - chr3_2:11673017-11673036 None:intergenic 40.0%
TTACCATTGTCTCTTTGACC+TGG - chr3_2:11673018-11673037 None:intergenic 40.0%
ATCTCAACTTGTAGATGCCA+AGG + chr3_2:11673092-11673111 Msa0395240:CDS 40.0%
AACTTGTAGATGCCAAGGAA+TGG + chr3_2:11673097-11673116 Msa0395240:CDS 40.0%
ATTGATGCCTTGCATATCCA+GGG + chr3_2:11673297-11673316 Msa0395240:CDS 40.0%
ATAATTTATACCGGTCAGGG+TGG + chr3_2:11673399-11673418 Msa0395240:CDS 40.0%
TAATTTATACCGGTCAGGGT+GGG + chr3_2:11673400-11673419 Msa0395240:CDS 40.0%
GTCAGATCAGAAGCTTCATA+AGG + chr3_2:11673449-11673468 Msa0395240:CDS 40.0%
! TGGGTTGAAAAAGCAAAAGG+AGG + chr3_2:11673600-11673619 Msa0395240:CDS 40.0%
GTTGAAAAAGCAAAAGGAGG+TGG + chr3_2:11673603-11673622 Msa0395240:CDS 40.0%
AACAGATTTCCAAACGGCAA+AGG - chr3_2:11673676-11673695 None:intergenic 40.0%
AAGTGATACAGGAAGACTCT+CGG - chr3_2:11673763-11673782 None:intergenic 40.0%
ATTTCGGATGTCTAAGAGAG+TGG - chr3_2:11673833-11673852 None:intergenic 40.0%
ATTTGGACTGCTCATGCATT+CGG + chr3_2:11673919-11673938 Msa0395240:CDS 40.0%
! TCAATGGAGTTCTGGCAAAT+CGG + chr3_2:11673970-11673989 Msa0395240:CDS 40.0%
TAGGAAAACACTGACATGTG+GGG - chr3_2:11674019-11674038 None:intergenic 40.0%
GTTAGGAAAACACTGACATG+TGG - chr3_2:11674021-11674040 None:intergenic 40.0%
!! TTCCATTTGGTGCTTCAAAC+CGG - chr3_2:11674066-11674085 None:intergenic 40.0%
!! ATAAAAGCACCAGCACGAAT+AGG - chr3_2:11674134-11674153 None:intergenic 40.0%
!! GCTTTTATTTGCGAGTATGC+AGG + chr3_2:11674146-11674165 Msa0395240:CDS 40.0%
GCCTAAGTTACTAGAAGAAG+CGG + chr3_2:11674277-11674296 Msa0395240:CDS 40.0%
ACCGCTTCTTCTAGTAACTT+AGG - chr3_2:11674281-11674300 None:intergenic 40.0%
! GTTGCTCTCCAAATGTTTTC+TGG + chr3_2:11674393-11674412 Msa0395240:CDS 40.0%
ATGCAACATGGAGAAAGGAT+TGG - chr3_2:11674445-11674464 None:intergenic 40.0%
ATACTTGTCAATGGAACCCG+GGG - chr3_2:11672662-11672681 None:intergenic 45.0%
TGACCTGAAGATTGACCTTG+AGG - chr3_2:11672739-11672758 None:intergenic 45.0%
TCTTCAGGTCAGTATCCTTC+TGG + chr3_2:11672748-11672767 Msa0395240:CDS 45.0%
CTTCAGGTCAGTATCCTTCT+GGG + chr3_2:11672749-11672768 Msa0395240:CDS 45.0%
GGTCCACCAAATGGGAAAAA+TGG - chr3_2:11672781-11672800 None:intergenic 45.0%
GTATCATGAGGTCCACCAAA+TGG - chr3_2:11672790-11672809 None:intergenic 45.0%
CGACTCCACTTCAAGCATTT+AGG + chr3_2:11672839-11672858 Msa0395240:CDS 45.0%
! CAAGCATTTAGGAGCCCTTT+TGG + chr3_2:11672850-11672869 Msa0395240:CDS 45.0%
!! ATTTAGGAGCCCTTTTGGAG+AGG + chr3_2:11672855-11672874 Msa0395240:CDS 45.0%
GATCCTCATCCTCTCCAAAA+GGG - chr3_2:11672867-11672886 None:intergenic 45.0%
AGATCCTCATCCTCTCCAAA+AGG - chr3_2:11672868-11672887 None:intergenic 45.0%
! GGTTTAGTTGGTATAAGCCC+AGG + chr3_2:11672997-11673016 Msa0395240:CDS 45.0%
CATTTGATGCGCTAAGACGA+AGG + chr3_2:11673067-11673086 Msa0395240:CDS 45.0%
TTCGAACAAACACAGCGAAG+AGG + chr3_2:11673181-11673200 Msa0395240:CDS 45.0%
TCGAACAAACACAGCGAAGA+GGG + chr3_2:11673182-11673201 Msa0395240:CDS 45.0%
TCAGTACCTGGAGTTGAGAT+TGG + chr3_2:11673210-11673229 Msa0395240:CDS 45.0%
CAGTACCTGGAGTTGAGATT+GGG + chr3_2:11673211-11673230 Msa0395240:CDS 45.0%
AGTACCTGGAGTTGAGATTG+GGG + chr3_2:11673212-11673231 Msa0395240:CDS 45.0%
GGTTTGCATGCTCAATCGAT+GGG + chr3_2:11673270-11673289 Msa0395240:CDS 45.0%
GTTTGCATGCTCAATCGATG+GGG + chr3_2:11673271-11673290 Msa0395240:CDS 45.0%
TTTGCATGCTCAATCGATGG+GGG + chr3_2:11673272-11673291 Msa0395240:CDS 45.0%
GATTGATGCCTTGCATATCC+AGG + chr3_2:11673296-11673315 Msa0395240:CDS 45.0%
GCTGTTAGCATTGTTTCGTC+AGG + chr3_2:11673342-11673361 Msa0395240:CDS 45.0%
AGAATACGACGATGAAGCTG+AGG + chr3_2:11673365-11673384 Msa0395240:CDS 45.0%
TCACAGCATCTTTGATGCCT+CGG - chr3_2:11673527-11673546 None:intergenic 45.0%
ATCAAAGATGCTGTGACTCC+AGG + chr3_2:11673531-11673550 Msa0395240:CDS 45.0%
GAAAAAGCAAAAGGAGGTGG+TGG + chr3_2:11673606-11673625 Msa0395240:CDS 45.0%
TCTGTTCAGAAGTGGAAAGC+TGG + chr3_2:11673690-11673709 Msa0395240:CDS 45.0%
GAATAAGTCCAGTCCTTGCA+GGG - chr3_2:11673719-11673738 None:intergenic 45.0%
AGAATAAGTCCAGTCCTTGC+AGG - chr3_2:11673720-11673739 None:intergenic 45.0%
TATTCTTGCTGACCTCTCCT+CGG + chr3_2:11673734-11673753 Msa0395240:CDS 45.0%
CTACAGCTGCAACTATGTGA+AGG - chr3_2:11673873-11673892 None:intergenic 45.0%
TCACATAGTTGCAGCTGTAG+TGG + chr3_2:11673873-11673892 Msa0395240:CDS 45.0%
! GGTAAAAAAGCATGTGTCCC+TGG + chr3_2:11673894-11673913 Msa0395240:CDS 45.0%
TCATGCATTCGGAGAAACGA+AGG + chr3_2:11673930-11673949 Msa0395240:CDS 45.0%
!! AAGCCGTTGGTTCATGAATG+TGG + chr3_2:11673993-11674012 Msa0395240:CDS 45.0%
! TTGGTGCTTCAAACCGGTTT+GGG - chr3_2:11674060-11674079 None:intergenic 45.0%
!! TTTGGTGCTTCAAACCGGTT+TGG - chr3_2:11674061-11674080 None:intergenic 45.0%
!! AACCGGTTTGAAGCACCAAA+TGG + chr3_2:11674061-11674080 Msa0395240:CDS 45.0%
AGGATAAAGGTTGGGGTCTT+CGG + chr3_2:11674099-11674118 Msa0395240:CDS 45.0%
GGTCACAAATGAGTCTAGTG+AGG + chr3_2:11674298-11674317 Msa0395240:CDS 45.0%
ACAGGCTGCCAGAAAACATT+TGG - chr3_2:11674404-11674423 None:intergenic 45.0%
ATACTTGTCAATGGAACCCG+GGG - chr3_2:11672662-11672681 None:intergenic 45.0%
TGACCTGAAGATTGACCTTG+AGG - chr3_2:11672739-11672758 None:intergenic 45.0%
TCTTCAGGTCAGTATCCTTC+TGG + chr3_2:11672748-11672767 Msa0395240:CDS 45.0%
CTTCAGGTCAGTATCCTTCT+GGG + chr3_2:11672749-11672768 Msa0395240:CDS 45.0%
GGTCCACCAAATGGGAAAAA+TGG - chr3_2:11672781-11672800 None:intergenic 45.0%
GTATCATGAGGTCCACCAAA+TGG - chr3_2:11672790-11672809 None:intergenic 45.0%
CGACTCCACTTCAAGCATTT+AGG + chr3_2:11672839-11672858 Msa0395240:CDS 45.0%
! CAAGCATTTAGGAGCCCTTT+TGG + chr3_2:11672850-11672869 Msa0395240:CDS 45.0%
!! ATTTAGGAGCCCTTTTGGAG+AGG + chr3_2:11672855-11672874 Msa0395240:CDS 45.0%
GATCCTCATCCTCTCCAAAA+GGG - chr3_2:11672867-11672886 None:intergenic 45.0%
AGATCCTCATCCTCTCCAAA+AGG - chr3_2:11672868-11672887 None:intergenic 45.0%
! GGTTTAGTTGGTATAAGCCC+AGG + chr3_2:11672997-11673016 Msa0395240:CDS 45.0%
CATTTGATGCGCTAAGACGA+AGG + chr3_2:11673067-11673086 Msa0395240:CDS 45.0%
TTCGAACAAACACAGCGAAG+AGG + chr3_2:11673181-11673200 Msa0395240:CDS 45.0%
TCGAACAAACACAGCGAAGA+GGG + chr3_2:11673182-11673201 Msa0395240:CDS 45.0%
TCAGTACCTGGAGTTGAGAT+TGG + chr3_2:11673210-11673229 Msa0395240:CDS 45.0%
CAGTACCTGGAGTTGAGATT+GGG + chr3_2:11673211-11673230 Msa0395240:CDS 45.0%
AGTACCTGGAGTTGAGATTG+GGG + chr3_2:11673212-11673231 Msa0395240:CDS 45.0%
GGTTTGCATGCTCAATCGAT+GGG + chr3_2:11673270-11673289 Msa0395240:CDS 45.0%
GTTTGCATGCTCAATCGATG+GGG + chr3_2:11673271-11673290 Msa0395240:CDS 45.0%
TTTGCATGCTCAATCGATGG+GGG + chr3_2:11673272-11673291 Msa0395240:CDS 45.0%
GATTGATGCCTTGCATATCC+AGG + chr3_2:11673296-11673315 Msa0395240:CDS 45.0%
GCTGTTAGCATTGTTTCGTC+AGG + chr3_2:11673342-11673361 Msa0395240:CDS 45.0%
AGAATACGACGATGAAGCTG+AGG + chr3_2:11673365-11673384 Msa0395240:CDS 45.0%
TCACAGCATCTTTGATGCCT+CGG - chr3_2:11673527-11673546 None:intergenic 45.0%
ATCAAAGATGCTGTGACTCC+AGG + chr3_2:11673531-11673550 Msa0395240:CDS 45.0%
GAAAAAGCAAAAGGAGGTGG+TGG + chr3_2:11673606-11673625 Msa0395240:CDS 45.0%
TCTGTTCAGAAGTGGAAAGC+TGG + chr3_2:11673690-11673709 Msa0395240:CDS 45.0%
GAATAAGTCCAGTCCTTGCA+GGG - chr3_2:11673719-11673738 None:intergenic 45.0%
AGAATAAGTCCAGTCCTTGC+AGG - chr3_2:11673720-11673739 None:intergenic 45.0%
TATTCTTGCTGACCTCTCCT+CGG + chr3_2:11673734-11673753 Msa0395240:CDS 45.0%
CTACAGCTGCAACTATGTGA+AGG - chr3_2:11673873-11673892 None:intergenic 45.0%
TCACATAGTTGCAGCTGTAG+TGG + chr3_2:11673873-11673892 Msa0395240:CDS 45.0%
! GGTAAAAAAGCATGTGTCCC+TGG + chr3_2:11673894-11673913 Msa0395240:CDS 45.0%
TCATGCATTCGGAGAAACGA+AGG + chr3_2:11673930-11673949 Msa0395240:CDS 45.0%
!! AAGCCGTTGGTTCATGAATG+TGG + chr3_2:11673993-11674012 Msa0395240:CDS 45.0%
! TTGGTGCTTCAAACCGGTTT+GGG - chr3_2:11674060-11674079 None:intergenic 45.0%
!! TTTGGTGCTTCAAACCGGTT+TGG - chr3_2:11674061-11674080 None:intergenic 45.0%
!! AACCGGTTTGAAGCACCAAA+TGG + chr3_2:11674061-11674080 Msa0395240:CDS 45.0%
AGGATAAAGGTTGGGGTCTT+CGG + chr3_2:11674099-11674118 Msa0395240:CDS 45.0%
GGTCACAAATGAGTCTAGTG+AGG + chr3_2:11674298-11674317 Msa0395240:CDS 45.0%
ACAGGCTGCCAGAAAACATT+TGG - chr3_2:11674404-11674423 None:intergenic 45.0%
TACTTGTCAATGGAACCCGG+GGG - chr3_2:11672661-11672680 None:intergenic 50.0%
GGGCTCCTAAATGCTTGAAG+TGG - chr3_2:11672847-11672866 None:intergenic 50.0%
AGCCCAGGTCAAAGAGACAA+TGG + chr3_2:11673012-11673031 Msa0395240:CDS 50.0%
GATGCCAAGGAATGGAACAC+AGG + chr3_2:11673105-11673124 Msa0395240:CDS 50.0%
CGAACCTGTGTTCCATTCCT+TGG - chr3_2:11673112-11673131 None:intergenic 50.0%
ACAAACACAGCGAAGAGGGT+AGG + chr3_2:11673186-11673205 Msa0395240:CDS 50.0%
AAGAGGGTAGGATCAGTACC+TGG + chr3_2:11673198-11673217 Msa0395240:CDS 50.0%
ATGTCCCCAATCTCAACTCC+AGG - chr3_2:11673219-11673238 None:intergenic 50.0%
CGGTTTGCATGCTCAATCGA+TGG + chr3_2:11673269-11673288 Msa0395240:CDS 50.0%
TTGCATGCTCAATCGATGGG+GGG + chr3_2:11673273-11673292 Msa0395240:CDS 50.0%
TACGACGATGAAGCTGAGGA+TGG + chr3_2:11673369-11673388 Msa0395240:CDS 50.0%
GTTGAAATTCCCACCCTGAC+CGG - chr3_2:11673412-11673431 None:intergenic 50.0%
AACCTAGTGCCTTTGCCGTT+TGG + chr3_2:11673664-11673683 Msa0395240:CDS 50.0%
!! TTCCAAACGGCAAAGGCACT+AGG - chr3_2:11673669-11673688 None:intergenic 50.0%
ATTCTTGCTGACCTCTCCTC+GGG + chr3_2:11673735-11673754 Msa0395240:CDS 50.0%
ATGAGCAGTCCAAATCGCCA+GGG - chr3_2:11673914-11673933 None:intergenic 50.0%
GGGCCACATTCATGAACCAA+CGG - chr3_2:11673999-11674018 None:intergenic 50.0%
TCATGGGATCCTATTCGTGC+TGG + chr3_2:11674122-11674141 Msa0395240:CDS 50.0%
TTATGGTTCCGATCACACCG+AGG + chr3_2:11674511-11674530 Msa0395240:CDS 50.0%
TATGGTTCCGATCACACCGA+GGG + chr3_2:11674512-11674531 Msa0395240:CDS 50.0%
TTTGTGTGCACTGCTACCCT+CGG - chr3_2:11674531-11674550 None:intergenic 50.0%
TGTGGATCATCAAACTGCCG+CGG + chr3_2:11674569-11674588 Msa0395240:CDS 50.0%
TACTTGTCAATGGAACCCGG+GGG - chr3_2:11672661-11672680 None:intergenic 50.0%
GGGCTCCTAAATGCTTGAAG+TGG - chr3_2:11672847-11672866 None:intergenic 50.0%
AGCCCAGGTCAAAGAGACAA+TGG + chr3_2:11673012-11673031 Msa0395240:CDS 50.0%
GATGCCAAGGAATGGAACAC+AGG + chr3_2:11673105-11673124 Msa0395240:CDS 50.0%
CGAACCTGTGTTCCATTCCT+TGG - chr3_2:11673112-11673131 None:intergenic 50.0%
ACAAACACAGCGAAGAGGGT+AGG + chr3_2:11673186-11673205 Msa0395240:CDS 50.0%
AAGAGGGTAGGATCAGTACC+TGG + chr3_2:11673198-11673217 Msa0395240:CDS 50.0%
ATGTCCCCAATCTCAACTCC+AGG - chr3_2:11673219-11673238 None:intergenic 50.0%
CGGTTTGCATGCTCAATCGA+TGG + chr3_2:11673269-11673288 Msa0395240:CDS 50.0%
TTGCATGCTCAATCGATGGG+GGG + chr3_2:11673273-11673292 Msa0395240:CDS 50.0%
TACGACGATGAAGCTGAGGA+TGG + chr3_2:11673369-11673388 Msa0395240:CDS 50.0%
GTTGAAATTCCCACCCTGAC+CGG - chr3_2:11673412-11673431 None:intergenic 50.0%
AACCTAGTGCCTTTGCCGTT+TGG + chr3_2:11673664-11673683 Msa0395240:CDS 50.0%
!! TTCCAAACGGCAAAGGCACT+AGG - chr3_2:11673669-11673688 None:intergenic 50.0%
ATTCTTGCTGACCTCTCCTC+GGG + chr3_2:11673735-11673754 Msa0395240:CDS 50.0%
ATGAGCAGTCCAAATCGCCA+GGG - chr3_2:11673914-11673933 None:intergenic 50.0%
GGGCCACATTCATGAACCAA+CGG - chr3_2:11673999-11674018 None:intergenic 50.0%
TCATGGGATCCTATTCGTGC+TGG + chr3_2:11674122-11674141 Msa0395240:CDS 50.0%
TTATGGTTCCGATCACACCG+AGG + chr3_2:11674511-11674530 Msa0395240:CDS 50.0%
TATGGTTCCGATCACACCGA+GGG + chr3_2:11674512-11674531 Msa0395240:CDS 50.0%
TTTGTGTGCACTGCTACCCT+CGG - chr3_2:11674531-11674550 None:intergenic 50.0%
TGTGGATCATCAAACTGCCG+CGG + chr3_2:11674569-11674588 Msa0395240:CDS 50.0%
TCAACACTCAGTTCCTCCCC+CGG + chr3_2:11672642-11672661 Msa0395240:CDS 55.0%
!! GAGCCCTTTTGGAGAGGATG+AGG + chr3_2:11672861-11672880 Msa0395240:CDS 55.0%
CGGCAGCATCACATTCAAGC+CGG + chr3_2:11672923-11672942 Msa0395240:CDS 55.0%
GGCAGCATCACATTCAAGCC+GGG + chr3_2:11672924-11672943 Msa0395240:CDS 55.0%
TGCATGCTCAATCGATGGGG+GGG + chr3_2:11673274-11673293 Msa0395240:CDS 55.0%
TTGCATATCCAGGGTGACCG+CGG + chr3_2:11673306-11673325 Msa0395240:CDS 55.0%
TGACCGCGGGGAAGATACTT+TGG + chr3_2:11673320-11673339 Msa0395240:CDS 55.0%
! CAGCCAAAGTATCTTCCCCG+CGG - chr3_2:11673326-11673345 None:intergenic 55.0%
!! GCAAAGGCACTAGGTTGTCC+AGG - chr3_2:11673660-11673679 None:intergenic 55.0%
! GGAAAGCTGGTTTCCCTGCA+AGG + chr3_2:11673703-11673722 Msa0395240:CDS 55.0%
AGCATGTGTCCCTGGCGATT+TGG + chr3_2:11673902-11673921 Msa0395240:CDS 55.0%
CATGAGCAGTCCAAATCGCC+AGG - chr3_2:11673915-11673934 None:intergenic 55.0%
TCTGGCAAATCGGAAGCCGT+TGG + chr3_2:11673980-11673999 Msa0395240:CDS 55.0%
AAGGTTGGGGTCTTCGGTCA+TGG + chr3_2:11674105-11674124 Msa0395240:CDS 55.0%
AGGTTGGGGTCTTCGGTCAT+GGG + chr3_2:11674106-11674125 Msa0395240:CDS 55.0%
! ACTGCTACCCTCGGTGTGAT+CGG - chr3_2:11674522-11674541 None:intergenic 55.0%
GAGGGTAGCAGTGCACACAA+AGG + chr3_2:11674530-11674549 Msa0395240:CDS 55.0%
TCAACACTCAGTTCCTCCCC+CGG + chr3_2:11672642-11672661 Msa0395240:CDS 55.0%
!! GAGCCCTTTTGGAGAGGATG+AGG + chr3_2:11672861-11672880 Msa0395240:CDS 55.0%
CGGCAGCATCACATTCAAGC+CGG + chr3_2:11672923-11672942 Msa0395240:CDS 55.0%
GGCAGCATCACATTCAAGCC+GGG + chr3_2:11672924-11672943 Msa0395240:CDS 55.0%
TGCATGCTCAATCGATGGGG+GGG + chr3_2:11673274-11673293 Msa0395240:CDS 55.0%
TTGCATATCCAGGGTGACCG+CGG + chr3_2:11673306-11673325 Msa0395240:CDS 55.0%
TGACCGCGGGGAAGATACTT+TGG + chr3_2:11673320-11673339 Msa0395240:CDS 55.0%
! CAGCCAAAGTATCTTCCCCG+CGG - chr3_2:11673326-11673345 None:intergenic 55.0%
!! GCAAAGGCACTAGGTTGTCC+AGG - chr3_2:11673660-11673679 None:intergenic 55.0%
! GGAAAGCTGGTTTCCCTGCA+AGG + chr3_2:11673703-11673722 Msa0395240:CDS 55.0%
AGCATGTGTCCCTGGCGATT+TGG + chr3_2:11673902-11673921 Msa0395240:CDS 55.0%
CATGAGCAGTCCAAATCGCC+AGG - chr3_2:11673915-11673934 None:intergenic 55.0%
TCTGGCAAATCGGAAGCCGT+TGG + chr3_2:11673980-11673999 Msa0395240:CDS 55.0%
AAGGTTGGGGTCTTCGGTCA+TGG + chr3_2:11674105-11674124 Msa0395240:CDS 55.0%
AGGTTGGGGTCTTCGGTCAT+GGG + chr3_2:11674106-11674125 Msa0395240:CDS 55.0%
! ACTGCTACCCTCGGTGTGAT+CGG - chr3_2:11674522-11674541 None:intergenic 55.0%
GAGGGTAGCAGTGCACACAA+AGG + chr3_2:11674530-11674549 Msa0395240:CDS 55.0%
CAACACTCAGTTCCTCCCCC+GGG + chr3_2:11672643-11672662 Msa0395240:CDS 60.0%
TTGTCAATGGAACCCGGGGG+AGG - chr3_2:11672658-11672677 None:intergenic 60.0%
GGAGTCGGCATCGCTCTACT+TGG - chr3_2:11672826-11672845 None:intergenic 60.0%
GCGGTCACCCTGGATATGCA+AGG - chr3_2:11673307-11673326 None:intergenic 60.0%
TGCATATCCAGGGTGACCGC+GGG + chr3_2:11673307-11673326 Msa0395240:CDS 60.0%
! GCTGGTTTCCCTGCAAGGAC+TGG + chr3_2:11673708-11673727 Msa0395240:CDS 60.0%
CAACACTCAGTTCCTCCCCC+GGG + chr3_2:11672643-11672662 Msa0395240:CDS 60.0%
TTGTCAATGGAACCCGGGGG+AGG - chr3_2:11672658-11672677 None:intergenic 60.0%
GGAGTCGGCATCGCTCTACT+TGG - chr3_2:11672826-11672845 None:intergenic 60.0%
GCGGTCACCCTGGATATGCA+AGG - chr3_2:11673307-11673326 None:intergenic 60.0%
TGCATATCCAGGGTGACCGC+GGG + chr3_2:11673307-11673326 Msa0395240:CDS 60.0%
! GCTGGTTTCCCTGCAAGGAC+TGG + chr3_2:11673708-11673727 Msa0395240:CDS 60.0%
GCATATCCAGGGTGACCGCG+GGG + chr3_2:11673308-11673327 Msa0395240:CDS 65.0%
TATCTTCCCCGCGGTCACCC+TGG - chr3_2:11673317-11673336 None:intergenic 65.0%
AGGAAGACTCTCGGCTCCCG+AGG - chr3_2:11673754-11673773 None:intergenic 65.0%
GCATATCCAGGGTGACCGCG+GGG + chr3_2:11673308-11673327 Msa0395240:CDS 65.0%
TATCTTCCCCGCGGTCACCC+TGG - chr3_2:11673317-11673336 None:intergenic 65.0%
AGGAAGACTCTCGGCTCCCG+AGG - chr3_2:11673754-11673773 None:intergenic 65.0%
GACTCTCGGCTCCCGAGGAG+AGG - chr3_2:11673749-11673768 None:intergenic 70.0%
GACTCTCGGCTCCCGAGGAG+AGG - chr3_2:11673749-11673768 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 11672625 11674604 11672625 ID=Msa0395240;Name=Msa0395240
chr3_2 mRNA 11672625 11674604 11672625 ID=Msa0395240-mRNA-1;Parent=Msa0395240;Name=Msa0395240-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|659
chr3_2 exon 11672625 11674604 11672625 ID=Msa0395240-mRNA-1:exon:2755;Parent=Msa0395240-mRNA-1
chr3_2 CDS 11672625 11674604 11672625 ID=Msa0395240-mRNA-1:cds;Parent=Msa0395240-mRNA-1
Gene Sequence

>Msa0395240

ATGGAAGAAGGGTTAGGTCAACACTCAGTTCCTCCCCCGGGTTCCATTGACAAGTATAAGATTCTGGATATTAAGCCTATAAGAAGTTTGATACCTGTTTTTTCAAGGAATCCTCAAGGTCAATCTTCAGGTCAGTATCCTTCTGGGTTTTCTCCATTTTTCCCATTTGGTGGACCTCATGATACTTCAACTGCAAAGCCAAGTAGAGCGATGCCGACTCCACTTCAAGCATTTAGGAGCCCTTTTGGAGAGGATGAGGATCTCAATGACAATGATGGTTTTAGCAACAAAAGAAGTGCGGCAGCATCACATTCAAGCCGGGTCAGATTGAAGAAGCATAAGGTATATAATGATGTTCATGTTGATATGAGTGGTTTAGTTGGTATAAGCCCAGGTCAAAGAGACAATGGTAACCGTGAAGTTGTTAATATTGTGCTCATGACATTTGATGCGCTAAGACGAAGGCTATCTCAACTTGTAGATGCCAAGGAATGGAACACAGGTTCGATCAAACGTACCGATTTAAAAGCTGGCAATATTTGTATGACCAAAGGAATTCGAACAAACACAGCGAAGAGGGTAGGATCAGTACCTGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAAATGTGTGTTATCGGTTTGCATGCTCAATCGATGGGGGGGATTGATGCCTTGCATATCCAGGGTGACCGCGGGGAAGATACTTTGGCTGTTAGCATTGTTTCGTCAGGAGAATACGACGATGAAGCTGAGGATGGTGATGTTATAATTTATACCGGTCAGGGTGGGAATTTCAACAAGAAAGATAAGCATGTGTCAGATCAGAAGCTTCATAAGGGTAATCTTGCTTTGGATAGAAGTTCACGAACACACAATGAAATAAGAGTCATCCGAGGCATCAAAGATGCTGTGACTCCAGGTGCAAAAATCTATGTCTATGATGGACTGTATAAAATTCAAGATTCATGGGTTGAAAAAGCAAAAGGAGGTGGTGGCTTGTTTAAGTATAAGTTGATAAGAGTGCCTGGACAACCTAGTGCCTTTGCCGTTTGGAAATCTGTTCAGAAGTGGAAAGCTGGTTTCCCTGCAAGGACTGGACTTATTCTTGCTGACCTCTCCTCGGGAGCCGAGAGTCTTCCTGTATCACTTGTCAATGAAGTCGATAACGTGAAGTCACCTGCCTTTTTCACATATTTCCACTCTCTTAGACATCCGAAATCATTCAGTTTAATGCAGCCTTCACATAGTTGCAGCTGTAGTGGTAAAAAAGCATGTGTCCCTGGCGATTTGGACTGCTCATGCATTCGGAGAAACGAAGGTGATTTTCCGTATATTATCAATGGAGTTCTGGCAAATCGGAAGCCGTTGGTTCATGAATGTGGCCCCACATGTCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAAACCGGTTTGAAGCACCAAATGGAAGTGTTCAAAACAAAGGATAAAGGTTGGGGTCTTCGGTCATGGGATCCTATTCGTGCTGGTGCTTTTATTTGCGAGTATGCAGGAGAAGTTATCGATAAAGCTAGGTTAAGTCAGCTTGTACAAGAAGGTGATACTGATGAGTATGTTTTCGATACAACCCGTATTTATGAATCTTTCAAGTGGAATTATGAGCCTAAGTTACTAGAAGAAGCGGTCACAAATGAGTCTAGTGAGGATTATGCTTTGCCACACCCTCTTATTATAAATGCTAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCTCCAAATGTTTTCTGGCAGCCTGTCTTATATGAAGAGAACAACCAATCCTTTCTCCATGTTGCATTTTTTGCATTGAGACATATCCCACCAATGCATGAGTTAACATATGATTATGGTTCCGATCACACCGAGGGTAGCAGTGCACACAAAGGTAGAAAGAAATGCTTATGTGGATCATCAAACTGCCGCGGTTCTTTTACTTGA
Protein sequence

>Msa0395240

MEEGLGQHSVPPPGSIDKYKILDIKPIRSLIPVFSRNPQGQSSGQYPSGFSPFFPFGGPHDTSTAKPSRAMPTPLQAFRSPFGEDEDLNDNDGFSNKRSAAASHSSRVRLKKHKVYNDVHVDMSGLVGISPGQRDNGNREVVNIVLMTFDALRRRLSQLVDAKEWNTGSIKRTDLKAGNICMTKGIRTNTAKRVGSVPGVEIGDIFFFRMEMCVIGLHAQSMGGIDALHIQGDRGEDTLAVSIVSSGEYDDEAEDGDVIIYTGQGGNFNKKDKHVSDQKLHKGNLALDRSSRTHNEIRVIRGIKDAVTPGAKIYVYDGLYKIQDSWVEKAKGGGGLFKYKLIRVPGQPSAFAVWKSVQKWKAGFPARTGLILADLSSGAESLPVSLVNEVDNVKSPAFFTYFHSLRHPKSFSLMQPSHSCSCSGKKACVPGDLDCSCIRRNEGDFPYIINGVLANRKPLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDKGWGLRSWDPIRAGAFICEYAGEVIDKARLSQLVQEGDTDEYVFDTTRIYESFKWNYEPKLLEEAVTNESSEDYALPHPLIINAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFLHVAFFALRHIPPMHELTYDYGSDHTEGSSAHKGRKKCLCGSSNCRGSFT*