AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0395340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395340 MtrunA17_Chr3g0080861 96.367 523 16 1 1 523 1 520 0.0 1043
Msa0395340 MtrunA17_Chr8g0354661 55.556 540 206 8 1 519 2 528 0.0 553
Msa0395340 MtrunA17_Chr3g0099131 78.261 115 25 0 37 151 41 155 2.55e-60 207
Msa0395340 MtrunA17_Chr2g0322521 70.866 127 37 0 31 157 23 149 1.72e-58 199
Msa0395340 MtrunA17_Chr1g0154031 54.491 167 69 2 37 203 76 235 4.53e-55 190
Msa0395340 MtrunA17_Chr1g0192411 59.664 119 48 0 35 153 10 128 6.86e-46 166
Msa0395340 MtrunA17_Chr5g0410961 61.321 106 41 0 35 140 10 115 4.28e-45 162
Msa0395340 MtrunA17_Chr1g0203411 64.220 109 39 0 37 145 12 120 7.67e-45 159
Msa0395340 MtrunA17_Chr2g0281071 62.500 104 39 0 37 140 13 116 2.89e-44 159
Msa0395340 MtrunA17_Chr5g0395281 62.500 104 39 0 37 140 12 115 7.67e-44 157
Msa0395340 MtrunA17_Chr4g0048511 61.538 104 40 0 37 140 13 116 1.28e-43 158
Msa0395340 MtrunA17_Chr2g0323411 60.000 110 43 1 37 145 12 121 9.60e-43 155
Msa0395340 MtrunA17_Chr4g0039971 61.538 104 40 0 37 140 13 116 1.02e-42 155
Msa0395340 MtrunA17_Chr1g0167691 61.538 104 40 0 37 140 12 115 1.31e-42 152
Msa0395340 MtrunA17_Chr1g0209661 57.547 106 45 0 37 142 27 132 2.02e-42 154
Msa0395340 MtrunA17_Chr1g0194301 60.185 108 43 0 35 142 31 138 2.72e-42 152
Msa0395340 MtrunA17_Chr8g0349261 61.905 105 39 1 37 140 13 117 1.05e-41 151
Msa0395340 MtrunA17_Chr7g0228231 58.252 103 43 0 37 139 14 116 1.07e-41 148
Msa0395340 MtrunA17_Chr3g0099141 75.904 83 20 0 37 119 40 122 1.49e-41 145
Msa0395340 MtrunA17_Chr1g0186061 57.983 119 49 1 25 142 7 125 1.93e-41 149
Msa0395340 MtrunA17_Chr3g0115821 59.615 104 42 0 37 140 12 115 1.99e-41 152
Msa0395340 MtrunA17_Chr8g0346561 60.377 106 42 0 35 140 10 115 2.27e-41 150
Msa0395340 MtrunA17_Chr1g0168661 55.462 119 49 1 28 142 8 126 2.62e-41 149
Msa0395340 MtrunA17_Chr1g0187761 60.577 104 41 0 37 140 12 115 3.95e-41 148
Msa0395340 MtrunA17_Chr7g0275911 61.386 101 39 0 35 135 10 110 5.15e-41 148
Msa0395340 MtrunA17_Chr4g0068061 58.491 106 44 0 35 140 10 115 5.42e-41 150
Msa0395340 MtrunA17_Chr7g0217221 59.434 106 43 0 37 142 12 117 6.17e-41 148
Msa0395340 MtrunA17_Chr5g0435101 57.692 104 44 0 37 140 11 114 7.09e-41 146
Msa0395340 MtrunA17_Chr7g0217741 59.434 106 43 0 35 140 10 115 8.97e-41 149
Msa0395340 MtrunA17_Chr1g0194291 59.434 106 43 0 37 142 21 126 9.65e-41 147
Msa0395340 MtrunA17_Chr1g0193371 59.434 106 43 0 37 142 12 117 1.15e-40 150
Msa0395340 MtrunA17_Chr6g0450101 57.282 103 44 0 37 139 14 116 1.19e-40 145
Msa0395340 MtrunA17_Chr1g0167661 59.615 104 42 0 37 140 12 115 1.56e-40 147
Msa0395340 MtrunA17_Chr4g0022931 58.654 104 43 0 37 140 13 116 1.59e-40 147
Msa0395340 MtrunA17_Chr4g0037141 60.784 102 40 0 39 140 14 115 1.89e-40 147
Msa0395340 MtrunA17_Chr7g0261281 59.615 104 42 0 37 140 12 115 1.98e-40 147
Msa0395340 MtrunA17_Chr4g0070641 61.616 99 38 0 37 135 12 110 2.54e-40 143
Msa0395340 MtrunA17_Chr3g0131121 61.765 102 39 0 39 140 14 115 2.71e-40 147
Msa0395340 MtrunA17_Chr4g0070611 61.616 99 38 0 37 135 12 110 5.42e-40 147
Msa0395340 MtrunA17_Chr4g0060721 59.615 104 42 0 37 140 13 116 5.66e-40 147
Msa0395340 MtrunA17_Chr6g0453211 62.626 99 37 0 37 135 12 110 6.90e-40 147
Msa0395340 MtrunA17_Chr4g0022901 57.692 104 44 0 37 140 13 116 7.70e-40 145
Msa0395340 MtrunA17_Chr3g0121241 57.547 106 45 0 35 140 40 145 7.89e-40 146
Msa0395340 MtrunA17_Chr4g0042671 59.434 106 43 0 35 140 10 115 8.05e-40 149
Msa0395340 MtrunA17_Chr2g0309911 56.731 104 45 0 37 140 11 114 8.40e-40 146
Msa0395340 MtrunA17_Chr4g0022911 56.731 104 45 0 37 140 13 116 8.62e-40 145
Msa0395340 MtrunA17_Chr6g0453471 59.434 106 43 0 35 140 10 115 9.63e-40 147
Msa0395340 MtrunA17_Chr7g0274581 53.846 104 48 0 37 140 12 115 1.49e-39 142
Msa0395340 MtrunA17_Chr7g0270891 57.547 106 45 0 37 142 12 117 2.14e-39 147
Msa0395340 MtrunA17_Chr8g0387421 58.491 106 44 0 37 142 12 117 2.17e-39 145
Msa0395340 MtrunA17_Chr2g0328771 55.660 106 47 0 37 142 20 125 2.82e-39 145
Msa0395340 MtrunA17_Chr1g0151941 51.639 122 52 2 37 157 12 127 3.00e-39 143
Msa0395340 MtrunA17_Chr3g0110351 55.556 108 48 0 35 142 10 117 3.33e-39 145
Msa0395340 MtrunA17_Chr1g0193801 57.547 106 45 0 37 142 12 117 3.91e-39 147
Msa0395340 MtrunA17_Chr7g0254411 58.491 106 44 0 35 140 10 115 4.01e-39 145
Msa0395340 MtrunA17_Chr8g0385321 57.843 102 43 0 39 140 14 115 4.81e-39 144
Msa0395340 MtrunA17_Chr7g0228891 46.707 167 78 5 35 197 10 169 7.06e-39 143
Msa0395340 MtrunA17_Chr5g0434571 55.556 108 48 0 35 142 46 153 7.65e-39 145
Msa0395340 MtrunA17_Chr2g0311221 58.586 99 41 0 37 135 14 112 1.41e-38 144
Msa0395340 MtrunA17_Chr4g0057031 56.731 104 45 0 37 140 12 115 2.55e-38 141
Msa0395340 MtrunA17_Chr3g0092401 55.660 106 47 0 37 142 13 118 3.04e-38 142
Msa0395340 MtrunA17_Chr3g0117091 57.692 104 44 0 37 140 12 115 5.11e-38 142
Msa0395340 MtrunA17_Chr1g0211161 56.731 104 45 0 37 140 13 116 5.14e-38 139
Msa0395340 MtrunA17_Chr2g0330041 55.769 104 46 0 37 140 12 115 5.53e-38 144
Msa0395340 MtrunA17_Chr8g0342541 55.769 104 46 0 37 140 12 115 8.44e-38 142
Msa0395340 MtrunA17_Chr2g0323351 57.282 103 44 0 37 139 12 114 9.23e-38 139
Msa0395340 MtrunA17_Chr4g0032401 55.660 106 47 0 37 142 17 122 1.52e-37 141
Msa0395340 MtrunA17_Chr4g0058631 56.731 104 45 0 37 140 12 115 1.73e-37 141
Msa0395340 MtrunA17_Chr8g0342521 56.731 104 45 0 37 140 12 115 2.01e-37 141
Msa0395340 MtrunA17_Chr5g0440781 38.922 167 95 3 38 203 13 173 2.83e-37 135
Msa0395340 MtrunA17_Chr6g0452271 57.692 104 44 0 37 140 12 115 2.92e-37 140
Msa0395340 MtrunA17_Chr3g0088461 56.731 104 45 0 37 140 22 125 2.95e-37 140
Msa0395340 MtrunA17_Chr4g0044421 55.882 102 45 0 39 140 14 115 3.01e-37 136
Msa0395340 MtrunA17_Chr7g0271241 60.204 98 39 0 37 134 12 109 3.28e-37 141
Msa0395340 MtrunA17_Chr4g0022891 55.882 102 45 0 37 138 12 113 4.06e-37 137
Msa0395340 MtrunA17_Chr5g0397231 58.586 99 41 0 37 135 12 110 4.96e-37 139
Msa0395340 MtrunA17_Chr1g0194951 56.604 106 46 0 35 140 10 115 5.11e-37 140
Msa0395340 MtrunA17_Chr5g0440761 38.922 167 95 3 38 203 13 173 5.12e-37 137
Msa0395340 MtrunA17_Chr4g0028311 54.630 108 48 1 37 143 12 119 6.54e-37 139
Msa0395340 MtrunA17_Chr1g0152011 57.143 105 44 1 37 140 12 116 7.51e-37 139
Msa0395340 MtrunA17_Chr5g0441141 38.922 167 95 3 38 203 13 173 8.60e-37 137
Msa0395340 MtrunA17_Chr7g0264641 48.000 125 61 2 37 157 12 136 1.16e-36 137
Msa0395340 MtrunA17_Chr5g0400821 56.190 105 45 1 37 140 12 116 1.99e-36 137
Msa0395340 MtrunA17_Chr3g0103281 55.769 104 46 0 37 140 12 115 4.09e-36 137
Msa0395340 MtrunA17_Chr1g0180391 50.000 124 60 1 37 158 19 142 7.60e-36 133
Msa0395340 MtrunA17_Chr5g0441131 47.934 121 62 1 35 154 7 127 7.93e-36 132
Msa0395340 MtrunA17_Chr2g0327351 57.000 100 42 1 37 135 12 111 8.36e-36 135
Msa0395340 MtrunA17_Chr5g0417821 54.808 104 47 0 37 140 7 110 8.94e-36 135
Msa0395340 MtrunA17_Chr8g0343831 55.882 102 45 0 39 140 10 111 1.37e-35 133
Msa0395340 MtrunA17_Chr4g0054391 58.586 99 40 1 37 134 12 110 2.72e-35 134
Msa0395340 MtrunA17_Chr3g0135311 54.286 105 47 1 37 140 12 116 3.88e-35 134
Msa0395340 MtrunA17_Chr6g0487491 49.573 117 50 2 37 144 12 128 6.50e-35 132
Msa0395340 MtrunA17_Chr4g0055981 55.556 99 44 0 37 135 55 153 7.56e-35 130
Msa0395340 MtrunA17_Chr8g0334881 49.533 107 53 1 37 142 10 116 7.74e-35 133
Msa0395340 MtrunA17_Chr2g0293911 56.311 103 45 0 37 139 24 126 7.93e-35 133
Msa0395340 MtrunA17_Chr7g0269831 57.547 106 45 0 35 140 10 115 8.79e-35 134
Msa0395340 MtrunA17_Chr4g0022881 51.961 102 49 0 38 139 13 114 9.48e-35 130
Msa0395340 MtrunA17_Chr8g0342481 53.333 105 48 1 37 140 12 116 1.37e-34 134
Msa0395340 MtrunA17_Chr2g0327821 54.808 104 47 0 37 140 6 109 1.45e-34 130
Msa0395340 MtrunA17_Chr4g0068921 55.340 103 46 0 37 139 24 126 1.71e-34 128
Msa0395340 MtrunA17_Chr4g0072751 58.000 100 41 1 37 135 12 111 1.82e-34 133
Msa0395340 MtrunA17_Chr1g0203441 55.340 103 46 0 38 140 14 116 2.13e-34 130
Msa0395340 MtrunA17_Chr4g0013361 49.533 107 53 1 37 142 10 116 4.09e-34 130
Msa0395340 MtrunA17_Chr7g0220341 45.238 126 67 1 17 140 5 130 2.47e-33 127
Msa0395340 MtrunA17_Chr5g0434831 51.923 104 50 0 37 140 7 110 2.54e-33 125
Msa0395340 MtrunA17_Chr5g0434931 45.736 129 68 1 12 140 12 138 2.71e-33 128
Msa0395340 MtrunA17_Chr8g0360111 55.340 103 44 1 33 135 23 123 5.31e-33 126
Msa0395340 MtrunA17_Chr4g0030881 51.327 113 48 1 36 141 6 118 5.37e-33 126
Msa0395340 MtrunA17_Chr5g0434911 49.038 104 53 0 37 140 21 124 1.13e-31 123
Msa0395340 MtrunA17_Chr6g0470971 51.456 103 50 0 38 140 15 117 2.20e-31 122
Msa0395340 MtrunA17_Chr7g0240821 47.748 111 53 1 33 143 2 107 3.25e-31 120
Msa0395340 MtrunA17_Chr5g0434841 50.000 104 52 0 37 140 20 123 6.47e-31 122
Msa0395340 MtrunA17_Chr7g0247131 65.333 75 26 0 69 143 10 84 2.00e-30 119
Msa0395340 MtrunA17_Chr7g0228991 49.038 104 53 0 37 140 29 132 2.93e-30 119
Msa0395340 MtrunA17_Chr5g0395221 56.098 82 36 0 32 113 7 88 1.43e-27 105
Msa0395340 MtrunA17_Chr5g0429661 48.598 107 51 3 36 141 119 222 1.93e-27 113
Msa0395340 MtrunA17_Chr4g0042611 55.696 79 35 0 35 113 10 88 2.85e-27 105
Msa0395340 MtrunA17_Chr3g0133601 47.170 106 55 1 39 144 37 141 5.28e-27 108
Msa0395340 MtrunA17_Chr2g0294811 54.430 79 36 0 35 113 10 88 6.02e-27 105
Msa0395340 MtrunA17_Chr4g0008551 48.148 108 53 2 39 145 38 143 8.56e-27 111
Msa0395340 MtrunA17_Chr5g0401731 49.020 102 51 1 39 140 15 115 6.58e-26 108
Msa0395340 MtrunA17_Chr3g0117511 40.157 127 73 2 31 155 175 300 1.01e-25 109
Msa0395340 MtrunA17_Chr4g0058991 46.789 109 50 3 36 141 206 309 3.29e-25 108
Msa0395340 MtrunA17_Chr2g0323321 52.564 78 37 0 37 114 11 88 3.71e-25 100
Msa0395340 MtrunA17_Chr6g0453751 51.485 101 38 3 27 118 12 110 4.42e-25 100
Msa0395340 MtrunA17_Chr6g0454921 47.059 102 53 1 39 140 15 115 8.89e-25 102
Msa0395340 MtrunA17_Chr3g0139671 46.154 104 55 1 37 140 83 185 9.56e-25 108
Msa0395340 MtrunA17_Chr8g0342531 52.564 78 37 0 37 114 12 89 1.33e-24 100
Msa0395340 MtrunA17_Chr7g0228531 42.520 127 66 4 17 143 202 321 1.65e-24 105
Msa0395340 MtrunA17_Chr4g0053431 44.118 102 56 1 39 140 5 105 2.56e-24 102
Msa0395340 MtrunA17_Chr7g0238631 48.077 104 53 1 37 140 111 213 6.90e-24 105
Msa0395340 MtrunA17_Chr5g0425591 48.889 90 45 1 30 118 2 91 8.40e-24 95.5
Msa0395340 MtrunA17_Chr5g0437321 43.750 128 69 2 23 150 5 129 9.37e-24 101
Msa0395340 MtrunA17_Chr6g0460661 42.056 107 61 1 39 145 16 121 9.82e-24 97.8
Msa0395340 MtrunA17_Chr1g0157731 43.269 104 58 1 37 140 89 191 1.09e-23 105
Msa0395340 MtrunA17_Chr8g0342511 53.947 76 35 0 37 112 12 87 2.45e-23 94.4
Msa0395340 MtrunA17_Chr6g0480581 42.727 110 62 1 39 148 4 112 8.20e-23 97.4
Msa0395340 MtrunA17_Chr5g0434901 58.824 68 28 0 71 138 7 74 1.40e-22 93.2
Msa0395340 MtrunA17_Chr7g0254261 43.636 110 61 1 39 148 89 197 1.89e-22 99.0
Msa0395340 MtrunA17_Chr5g0417621 44.762 105 55 2 39 142 134 236 5.91e-22 98.6
Msa0395340 MtrunA17_Chr4g0042501 40.650 123 68 3 23 142 87 207 7.41e-22 98.2
Msa0395340 MtrunA17_Chr7g0229101 54.286 70 32 0 69 138 4 73 1.33e-21 93.2
Msa0395340 MtrunA17_Chr8g0342461 49.367 79 39 1 37 114 12 90 2.71e-21 90.1
Msa0395340 MtrunA17_Chr8g0342471 49.367 79 39 1 37 114 12 90 3.63e-21 89.7
Msa0395340 MtrunA17_Chr5g0397841 45.918 98 52 1 37 134 108 204 4.81e-21 96.3
Msa0395340 MtrunA17_Chr7g0229131 52.113 71 34 0 69 139 4 74 5.76e-21 90.1
Msa0395340 MtrunA17_Chr7g0228401 48.936 94 46 2 50 143 290 381 1.99e-20 94.4
Msa0395340 MtrunA17_Chr7g0238651 38.835 103 61 1 42 142 10 112 4.67e-20 91.7
Msa0395340 MtrunA17_Chr7g0228481 38.583 127 71 4 17 143 202 321 6.01e-20 92.4
Msa0395340 MtrunA17_Chr3g0125801 43.810 105 56 2 39 142 16 118 1.94e-19 89.0
Msa0395340 MtrunA17_Chr3g0093811 50.000 72 36 0 69 140 14 85 4.37e-19 87.4
Msa0395340 MtrunA17_Chr6g0460671 40.367 109 60 2 39 145 99 204 7.19e-19 88.2
Msa0395340 MtrunA17_Chr1g0177901 44.828 87 47 1 49 135 4 89 8.75e-18 82.0
Msa0395340 MtrunA17_Chr1g0193901 50.575 87 41 2 37 121 11 97 2.89e-17 77.8
Msa0395340 MtrunA17_Chr1g0193891 50.575 87 41 2 37 121 11 97 2.89e-17 77.8
Msa0395340 MtrunA17_Chr1g0193871 50.575 87 41 2 37 121 11 97 2.89e-17 77.8
Msa0395340 MtrunA17_Chr1g0193881 50.575 87 41 2 37 121 11 97 2.89e-17 77.8
Msa0395340 MtrunA17_Chr7g0233061 31.618 136 83 4 7 139 148 276 7.68e-17 82.0
Msa0395340 MtrunA17_Chr8g0362231 38.384 99 60 1 42 140 25 122 7.46e-16 79.7
Msa0395340 MtrunA17_Chr5g0416341 36.634 101 63 1 42 142 29 128 1.62e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395340 AT3G11440.3 40.816 490 245 13 36 498 40 511 1.38e-98 309
Msa0395340 AT3G11440.4 40.816 490 245 13 36 498 40 511 1.38e-98 309
Msa0395340 AT3G11440.1 40.816 490 245 13 36 498 40 511 1.38e-98 309
Msa0395340 AT5G06100.5 40.206 485 234 12 34 498 29 477 2.88e-93 294
Msa0395340 AT5G06100.2 40.206 485 234 12 34 498 29 477 2.88e-93 294
Msa0395340 AT5G06100.3 40.206 485 234 12 34 498 29 477 2.88e-93 294
Msa0395340 AT5G06100.4 40.206 485 234 12 34 498 29 477 2.88e-93 294
Msa0395340 AT3G11440.2 45.093 377 179 9 36 387 40 413 5.18e-91 286
Msa0395340 AT5G06100.1 44.162 394 194 10 34 407 29 416 2.62e-90 284
Msa0395340 AT5G55020.1 79.339 121 25 0 32 152 21 141 7.69e-66 222
Msa0395340 AT2G32460.1 75.385 130 32 0 24 153 5 134 5.35e-65 219
Msa0395340 AT2G26960.1 39.216 357 160 11 37 365 20 347 2.28e-64 216
Msa0395340 AT2G32460.2 80.000 120 24 0 34 153 3 122 2.47e-64 217
Msa0395340 AT4G26930.1 75.194 129 26 1 23 151 11 133 4.96e-64 214
Msa0395340 AT4G21440.1 46.591 176 81 4 37 199 12 187 1.75e-44 160
Msa0395340 AT4G28110.1 60.909 110 42 1 37 145 12 121 3.92e-44 157
Msa0395340 AT3G02940.2 62.500 104 39 0 37 140 12 115 6.65e-44 158
Msa0395340 AT3G61250.1 63.208 106 39 0 35 140 10 115 9.42e-44 157
Msa0395340 AT3G02940.1 62.500 104 39 0 37 140 12 115 1.11e-43 157
Msa0395340 AT3G02940.3 62.500 104 39 0 37 140 12 115 1.11e-43 157
Msa0395340 AT4G05100.1 63.462 104 38 0 37 140 13 116 1.35e-43 157
Msa0395340 AT1G22640.1 62.500 104 39 0 37 140 12 115 2.78e-43 154
Msa0395340 AT4G09460.1 63.725 102 37 0 39 140 14 115 1.65e-42 152
Msa0395340 AT3G01530.1 60.194 103 41 0 37 139 25 127 2.03e-42 150
Msa0395340 AT5G16770.4 60.577 104 41 0 37 140 12 115 2.84e-42 154
Msa0395340 AT5G16770.3 60.577 104 41 0 37 140 12 115 2.84e-42 154
Msa0395340 AT5G40330.1 48.980 147 65 2 38 174 13 159 3.15e-42 150
Msa0395340 AT5G16770.1 60.577 104 41 0 37 140 12 115 4.18e-42 154
Msa0395340 AT5G16770.2 60.577 104 41 0 37 140 12 115 4.18e-42 154
Msa0395340 AT1G35515.1 61.538 104 40 0 37 140 12 115 9.65e-42 149
Msa0395340 AT3G13540.1 58.654 104 43 0 37 140 23 126 1.56e-41 149
Msa0395340 AT5G10280.1 61.538 104 40 0 37 140 12 115 1.96e-41 152
Msa0395340 AT5G14750.1 59.223 103 42 0 38 140 17 119 2.65e-41 147
Msa0395340 AT1G34670.1 60.577 104 41 0 37 140 12 115 3.16e-41 152
Msa0395340 AT2G16720.1 61.538 104 40 0 37 140 12 115 3.18e-41 149
Msa0395340 AT5G65230.1 58.654 104 43 0 37 140 12 115 3.88e-41 150
Msa0395340 AT5G54230.1 59.615 104 42 0 37 140 12 115 8.20e-41 150
Msa0395340 AT2G31180.1 57.798 109 46 0 37 145 12 120 1.02e-40 147
Msa0395340 AT3G01140.2 60.577 104 41 0 37 140 12 115 1.08e-40 150
Msa0395340 AT3G47600.1 57.407 108 46 0 35 142 10 117 1.82e-40 149
Msa0395340 AT1G66230.1 58.333 108 45 0 35 142 10 117 2.01e-40 147
Msa0395340 AT3G23250.1 56.637 113 49 0 37 149 12 124 2.04e-40 147
Msa0395340 AT4G13480.1 59.813 107 43 0 36 142 5 111 2.13e-40 147
Msa0395340 AT3G01140.1 60.577 104 41 0 37 140 55 158 2.27e-40 150
Msa0395340 AT3G27810.1 55.340 103 46 0 37 139 20 122 3.35e-40 145
Msa0395340 AT4G38620.1 60.784 102 40 0 39 140 14 115 3.52e-40 147
Msa0395340 AT5G49330.1 57.798 109 46 0 35 143 10 118 4.11e-40 148
Msa0395340 AT5G26660.1 47.619 147 65 3 37 171 12 158 5.14e-40 148
Msa0395340 AT5G15310.1 59.615 104 42 0 37 140 12 115 5.25e-40 148
Msa0395340 AT5G62470.2 57.407 108 46 0 35 142 10 117 5.87e-40 148
Msa0395340 AT5G15310.2 59.615 104 42 0 37 140 12 115 5.96e-40 147
Msa0395340 AT1G57560.2 57.692 104 44 0 37 140 12 115 5.97e-40 146
Msa0395340 AT5G15310.4 59.615 104 42 0 37 140 12 115 5.99e-40 145
Msa0395340 AT4G01680.3 58.491 106 44 0 37 142 12 117 6.16e-40 145
Msa0395340 AT1G57560.1 57.692 104 44 0 37 140 12 115 7.00e-40 147
Msa0395340 AT5G40350.1 55.340 103 46 0 37 139 17 119 7.04e-40 144
Msa0395340 AT3G13890.2 57.692 104 44 0 37 140 12 115 7.55e-40 148
Msa0395340 AT5G07690.1 56.604 106 46 0 34 139 9 114 8.43e-40 147
Msa0395340 AT4G34990.1 59.804 102 41 0 39 140 14 115 9.50e-40 145
Msa0395340 AT2G47190.1 55.660 106 47 0 37 142 20 125 1.10e-39 145
Msa0395340 AT5G61420.2 56.075 107 47 0 34 140 9 115 1.25e-39 148
Msa0395340 AT1G74650.1 57.547 106 45 0 35 140 10 115 1.30e-39 147
Msa0395340 AT3G28910.1 60.185 108 41 1 33 140 10 115 1.34e-39 146
Msa0395340 AT3G24310.1 58.491 106 44 0 38 143 19 124 1.53e-39 145
Msa0395340 AT1G06180.1 59.434 106 43 0 35 140 10 115 2.01e-39 144
Msa0395340 AT4G01680.1 58.491 106 44 0 37 142 12 117 2.08e-39 146
Msa0395340 AT5G07700.1 55.140 107 48 0 34 140 9 115 2.31e-39 146
Msa0395340 AT5G07700.2 55.140 107 48 0 34 140 9 115 2.31e-39 146
Msa0395340 AT3G27920.1 58.252 103 43 0 38 140 15 117 5.32e-39 142
Msa0395340 AT1G48000.1 54.286 105 48 0 35 139 30 134 5.53e-39 142
Msa0395340 AT1G18570.1 60.577 104 41 0 37 140 13 116 5.56e-39 145
Msa0395340 AT4G37780.1 56.075 107 46 1 35 140 10 116 5.69e-39 144
Msa0395340 AT1G68320.1 55.660 106 47 0 37 142 19 124 8.41e-39 143
Msa0395340 AT2G47460.1 57.547 106 45 0 35 140 10 115 8.56e-39 145
Msa0395340 AT1G25340.1 49.600 125 57 1 18 142 5 123 1.13e-38 143
Msa0395340 AT5G12870.1 56.604 106 46 0 37 142 18 123 1.13e-38 143
Msa0395340 AT1G08810.1 56.604 106 46 0 35 140 10 115 1.25e-38 142
Msa0395340 AT5G62470.1 57.407 108 45 1 35 142 10 116 1.92e-38 144
Msa0395340 AT5G35550.1 56.731 104 45 0 37 140 14 117 3.30e-38 141
Msa0395340 AT1G79180.1 55.769 104 46 0 37 140 14 117 7.43e-38 141
Msa0395340 AT5G16600.1 56.481 108 47 0 35 142 10 117 8.22e-38 142
Msa0395340 AT5G60890.1 55.660 106 47 0 37 142 12 117 1.05e-37 140
Msa0395340 AT5G62320.1 55.752 113 43 1 35 140 11 123 1.07e-37 139
Msa0395340 AT4G12350.1 54.717 106 48 0 35 140 10 115 1.12e-37 140
Msa0395340 AT5G56110.1 56.731 104 45 0 37 140 12 115 1.16e-37 141
Msa0395340 AT3G30210.1 57.547 106 45 0 38 143 28 133 1.29e-37 140
Msa0395340 AT4G17785.2 54.808 104 47 0 37 140 13 116 1.47e-37 142
Msa0395340 AT4G17785.1 54.808 104 47 0 37 140 13 116 1.93e-37 142
Msa0395340 AT1G09540.1 54.717 106 48 0 37 142 12 117 2.01e-37 142
Msa0395340 AT2G26950.1 47.407 135 70 1 37 170 16 150 2.77e-37 142
Msa0395340 AT4G22680.1 54.808 104 47 0 37 140 12 115 3.14e-37 138
Msa0395340 AT1G63910.1 55.660 106 47 0 37 142 12 117 3.16e-37 141
Msa0395340 AT3G08500.1 51.163 129 61 1 16 142 7 135 3.47e-37 140
Msa0395340 AT3G62610.1 55.660 106 47 0 35 140 10 115 3.88e-37 140
Msa0395340 AT1G16490.1 53.846 104 48 0 37 140 14 117 4.89e-37 138
Msa0395340 AT3G13890.1 53.097 113 44 1 37 140 12 124 6.01e-37 140
Msa0395340 AT3G60460.1 53.271 107 49 1 37 142 11 117 6.98e-37 139
Msa0395340 AT5G52600.1 54.630 108 49 0 33 140 8 115 7.01e-37 135
Msa0395340 AT5G14340.1 55.660 106 47 0 37 142 24 129 7.60e-37 137
Msa0395340 AT1G56160.1 53.846 104 48 0 37 140 14 117 8.35e-37 138
Msa0395340 AT3G12720.1 50.442 113 56 0 28 140 13 125 1.33e-36 138
Msa0395340 AT1G74080.1 57.282 103 44 0 37 139 12 114 1.80e-36 138
Msa0395340 AT2G36890.1 53.913 115 50 2 37 150 12 124 2.58e-36 137
Msa0395340 AT5G65790.1 57.143 105 44 1 37 140 12 116 3.07e-36 139
Msa0395340 AT4G01680.2 52.542 118 44 1 37 142 12 129 3.59e-36 138
Msa0395340 AT5G57620.1 56.190 105 45 1 37 140 12 116 4.11e-36 137
Msa0395340 AT2G36890.2 53.913 115 50 2 37 150 53 165 4.67e-36 137
Msa0395340 AT5G23000.1 54.286 105 47 1 37 140 12 116 4.94e-36 137
Msa0395340 AT3G49690.1 57.143 105 44 1 37 140 12 116 6.42e-36 136
Msa0395340 AT5G59780.3 55.340 103 46 0 38 140 9 111 1.06e-35 133
Msa0395340 AT1G74430.1 54.808 104 47 0 37 140 12 115 1.53e-35 134
Msa0395340 AT3G28470.1 57.576 99 42 0 37 135 12 110 2.41e-35 135
Msa0395340 AT3G46130.1 54.369 103 47 0 38 140 10 112 3.68e-35 132
Msa0395340 AT3G12820.1 53.846 104 48 0 37 140 14 117 1.55e-34 130
Msa0395340 AT1G25340.2 47.200 125 55 2 18 142 5 118 2.36e-34 131
Msa0395340 AT3G06490.1 56.311 103 45 0 37 139 19 121 3.68e-34 132
Msa0395340 AT1G25340.3 47.200 125 55 2 18 142 5 118 4.47e-34 131
Msa0395340 AT1G66370.1 50.476 105 52 0 37 141 8 112 9.02e-34 128
Msa0395340 AT1G18710.1 52.885 104 49 0 37 140 12 115 2.20e-33 128
Msa0395340 AT5G49620.1 53.398 103 48 0 37 139 26 128 6.63e-33 128
Msa0395340 AT1G79180.2 42.336 137 46 1 37 140 14 150 4.43e-32 126
Msa0395340 AT3G53200.1 50.000 108 54 0 36 143 8 115 4.93e-32 123
Msa0395340 AT3G48920.1 51.961 102 49 0 38 139 19 120 1.87e-31 122
Msa0395340 AT1G66380.1 51.429 105 51 0 37 141 8 112 2.53e-31 118
Msa0395340 AT5G52260.1 48.696 115 59 0 38 152 13 127 6.64e-31 121
Msa0395340 AT1G56650.1 50.476 105 52 0 37 141 8 112 2.51e-30 119
Msa0395340 AT5G26660.2 49.123 114 46 3 70 171 14 127 1.34e-29 119
Msa0395340 AT5G49620.2 47.009 117 48 1 37 139 26 142 2.06e-29 118
Msa0395340 AT1G66390.1 50.476 105 52 0 37 141 8 112 2.79e-29 116
Msa0395340 AT4G25560.1 48.544 103 53 0 38 140 11 113 6.30e-29 116
Msa0395340 AT3G27785.1 47.619 105 54 1 37 141 187 290 2.07e-26 112
Msa0395340 AT5G35550.2 61.972 71 27 0 70 140 50 120 2.46e-26 108
Msa0395340 AT3G27810.2 56.944 72 31 0 68 139 2 73 2.62e-26 105
Msa0395340 AT5G58850.1 49.057 106 50 3 37 141 103 205 4.48e-26 110
Msa0395340 AT5G11050.1 42.537 134 63 4 39 171 105 225 8.40e-26 110
Msa0395340 AT4G18770.1 48.113 106 51 3 37 141 215 317 9.93e-26 110
Msa0395340 AT3G55730.1 48.077 104 51 2 39 141 56 157 1.08e-25 109
Msa0395340 AT5G40360.1 42.453 106 60 1 36 141 155 259 1.22e-25 108
Msa0395340 AT3G09230.1 50.000 102 50 1 39 140 55 155 1.40e-25 108
Msa0395340 AT5G02320.1 41.844 141 69 3 37 174 125 255 1.49e-25 110
Msa0395340 AT5G02320.2 41.844 141 69 3 37 174 125 255 1.49e-25 110
Msa0395340 AT5G02320.3 41.844 141 69 3 37 174 65 195 2.02e-25 109
Msa0395340 AT5G14750.3 60.294 68 27 0 73 140 18 85 2.38e-25 102
Msa0395340 AT5G40350.2 57.143 70 30 0 70 139 5 74 2.82e-25 102
Msa0395340 AT3G12820.2 63.235 68 25 0 73 140 2 69 3.90e-25 103
Msa0395340 AT2G23290.1 50.000 102 50 1 39 140 13 113 4.30e-25 105
Msa0395340 AT3G47600.2 58.904 73 30 0 70 142 39 111 9.83e-25 105
Msa0395340 AT5G67300.1 48.039 102 52 1 39 140 6 106 1.35e-24 104
Msa0395340 AT3G46130.3 59.722 72 29 0 69 140 9 80 1.99e-24 102
Msa0395340 AT2G39880.1 45.872 109 56 2 33 140 44 150 2.71e-24 104
Msa0395340 AT1G69560.2 36.869 198 103 7 14 208 102 280 3.62e-24 103
Msa0395340 AT5G59780.2 59.155 71 29 0 70 140 20 90 4.07e-24 100
Msa0395340 AT4G37260.1 47.059 102 53 1 39 140 13 113 4.14e-24 103
Msa0395340 AT1G69560.1 36.869 198 103 7 14 208 86 264 4.87e-24 103
Msa0395340 AT3G46130.4 59.155 71 29 0 70 140 20 90 5.87e-24 100
Msa0395340 AT3G53200.2 56.757 74 32 0 70 143 9 82 6.39e-24 100
Msa0395340 AT3G50060.1 44.037 109 60 1 39 147 6 113 8.51e-24 102
Msa0395340 AT3G09370.1 46.154 104 55 1 37 140 128 230 1.33e-23 104
Msa0395340 AT3G09370.2 46.154 104 55 1 37 140 133 235 1.40e-23 104
Msa0395340 AT3G09370.3 46.154 104 55 1 37 140 141 243 1.65e-23 104
Msa0395340 AT4G32730.5 43.269 104 58 1 37 140 85 187 2.11e-23 105
Msa0395340 AT4G32730.4 43.269 104 58 1 37 140 85 187 2.11e-23 105
Msa0395340 AT4G32730.3 43.269 104 58 1 37 140 85 187 2.11e-23 105
Msa0395340 AT4G32730.2 43.269 104 58 1 37 140 85 187 2.11e-23 105
Msa0395340 AT4G32730.1 43.269 104 58 1 37 140 85 187 2.24e-23 104
Msa0395340 AT1G17950.1 44.828 116 61 2 35 149 1 114 4.32e-23 99.0
Msa0395340 AT5G11510.3 43.269 104 58 1 37 140 79 181 5.81e-23 103
Msa0395340 AT5G11510.1 43.269 104 58 1 37 140 79 181 5.81e-23 103
Msa0395340 AT5G11510.4 43.269 104 58 1 37 140 79 181 5.81e-23 103
Msa0395340 AT5G11510.5 43.269 104 58 1 37 140 79 181 7.64e-23 103
Msa0395340 AT5G11510.2 43.269 104 58 1 37 140 79 181 7.72e-23 103
Msa0395340 AT5G17800.1 44.860 107 58 1 36 142 90 195 9.03e-23 99.8
Msa0395340 AT1G26780.2 45.370 108 56 2 36 142 95 200 9.10e-23 100
Msa0395340 AT1G26780.1 45.370 108 56 2 36 142 95 200 9.34e-23 98.6
Msa0395340 AT4G33450.1 43.519 108 60 1 38 145 18 124 1.79e-22 97.1
Msa0395340 AT1G18960.1 44.118 102 54 2 39 140 10 108 1.86e-21 95.5
Msa0395340 AT1G66380.3 55.556 72 32 0 70 141 8 79 4.03e-21 89.0
Msa0395340 AT2G25230.1 42.308 104 58 2 37 140 24 125 5.52e-21 92.4
Msa0395340 AT1G73410.1 44.954 109 57 2 35 142 2 108 1.39e-20 91.7
Msa0395340 AT4G00540.2 34.146 164 91 4 37 197 101 250 1.86e-20 94.0
Msa0395340 AT1G73410.2 44.954 109 57 2 35 142 2 108 2.42e-20 89.7
Msa0395340 AT4G00540.1 34.146 164 91 4 37 197 99 248 3.21e-20 93.6
Msa0395340 AT3G29020.2 41.121 107 62 1 36 142 64 169 3.33e-20 91.7
Msa0395340 AT3G29020.1 41.121 107 62 1 36 142 62 167 3.39e-20 90.1
Msa0395340 AT1G66380.2 50.000 78 39 0 37 114 8 85 1.76e-19 84.3
Msa0395340 AT1G22640.3 63.158 57 21 0 84 140 2 58 2.73e-19 86.7
Msa0395340 AT2G37630.1 38.835 103 61 1 42 142 7 109 4.84e-19 89.4
Msa0395340 AT5G40430.1 34.307 137 84 4 4 140 22 152 7.21e-19 86.7
Msa0395340 AT3G23250.2 53.030 66 31 0 84 149 2 67 2.17e-17 82.0
Msa0395340 AT1G71030.2 50.769 65 32 0 76 140 5 69 4.94e-17 79.7
Msa0395340 AT1G71030.1 50.769 65 32 0 76 140 19 83 6.34e-17 79.7
Msa0395340 AT5G14750.4 53.448 58 27 0 83 140 1 58 7.43e-17 77.8
Msa0395340 AT5G14750.2 53.448 58 27 0 83 140 1 58 7.43e-17 77.8
Msa0395340 AT1G14350.2 33.663 101 66 1 42 142 28 127 7.86e-15 77.0
Msa0395340 AT1G14350.1 33.663 101 66 1 42 142 28 127 7.86e-15 77.0
Msa0395340 AT5G39700.1 36.000 100 63 1 40 139 57 155 1.31e-13 70.1
Msa0395340 AT2G02820.2 32.673 101 67 1 42 142 33 132 9.91e-13 70.9
Msa0395340 AT2G02820.1 32.673 101 67 1 42 142 33 132 1.51e-12 70.1
Msa0395340 AT2G02820.3 32.673 101 67 1 42 142 33 132 3.02e-12 68.6
Msa0395340 AT5G59780.1 54.348 46 21 0 95 140 1 46 1.22e-11 63.9
Msa0395340 AT3G46130.2 54.348 46 21 0 95 140 1 46 1.81e-11 63.9
Msa0395340 AT4G25560.2 52.174 46 22 0 95 140 2 47 7.48e-11 62.4

Find 172 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGATCCTTTCTTTAAATT+TGG 0.143322 3_2:-11813690 None:intergenic
TTACTATCACTTTCTATTTC+AGG 0.162255 3_2:+11812514 Msa0395340:five_prime_UTR
GAACAATTGTTATTTGAATT+TGG 0.225333 3_2:-11816273 None:intergenic
GATAAGACTGCACAATCTTT+TGG 0.229185 3_2:+11815943 Msa0395340:CDS
CAGCCACCAAAGCCGGTTTC+TGG 0.231887 3_2:-11816102 None:intergenic
AGTGAGAGAAAGAGAGAAAA+TGG 0.257634 3_2:-11812023 None:intergenic
TGGAAATGGAATGGAGATTT+TGG 0.260068 3_2:-11811942 None:intergenic
ATCTGCAGAAGACGCTATTT+TGG 0.270851 3_2:+11813557 Msa0395340:CDS
TGCCCATCTGTTTCCCATTT+CGG 0.272213 3_2:-11813751 None:intergenic
CAAAGCCGGTTTCTGGATAT+TGG 0.282709 3_2:-11816095 None:intergenic
AAGAGAGGAGGTGGTGGAAA+TGG 0.292028 3_2:-11811956 None:intergenic
CAGAAACCGGCTTTGGTGGC+TGG 0.293385 3_2:+11816103 Msa0395340:CDS
TGACAATTTGAAGGAAAATC+AGG 0.295404 3_2:+11815738 Msa0395340:CDS
TTGGATTGCAAGCTGCTAAA+TGG 0.296673 3_2:+11817211 Msa0395340:three_prime_UTR
TAACAGCATGGCACTCATTC+AGG 0.301452 3_2:-11816422 None:intergenic
TCGAGCGTGCCACTATTATT+TGG 0.311579 3_2:-11816222 None:intergenic
TGATCCTGAACATGGTAAAA+TGG 0.311792 3_2:-11815913 None:intergenic
GAAACCGGCTTTGGTGGCTG+GGG 0.324398 3_2:+11816105 Msa0395340:CDS
GGAATTTCAGTTAACACCTT+TGG 0.328652 3_2:+11812479 Msa0395340:five_prime_UTR
TGCTCAACTTCATTCCGAAA+TGG 0.334802 3_2:+11813737 Msa0395340:CDS
ACCGGCTTTGGTGGCTGGGG+GGG 0.336926 3_2:+11816108 Msa0395340:CDS
CAAGTGGAACGAACAAGAAT+TGG 0.357296 3_2:+11815884 Msa0395340:CDS
GGTAACGGAGGAAGTGTTAA+TGG 0.360550 3_2:+11813504 Msa0395340:CDS
CCCGATGACGCCTCTTGGTC+CGG 0.365400 3_2:-11815567 None:intergenic
ATACCTGCTCAGAACTTTAG+TGG 0.366234 3_2:+11816474 Msa0395340:CDS
TGACATGGCACTTGAAACTT+TGG 0.366762 3_2:+11817192 Msa0395340:three_prime_UTR
AGAAACCGGCTTTGGTGGCT+GGG 0.370969 3_2:+11816104 Msa0395340:CDS
TGTCTTCTTCTGATAAATAA+TGG 0.371278 3_2:-11816247 None:intergenic
ATTGTTCGCAAACGAACTTC+TGG 0.371602 3_2:-11815610 None:intergenic
TGCAATATTTGACAATTTGA+AGG 0.373979 3_2:+11815729 Msa0395340:CDS
AAACCGGCTTTGGTGGCTGG+GGG 0.376163 3_2:+11816106 Msa0395340:CDS
CACTGTTTGGGGTAGAAACT+TGG 0.377211 3_2:-11816808 None:intergenic
GCTCAACTTCATTCCGAAAT+GGG 0.383434 3_2:+11813738 Msa0395340:CDS
AACGCTGTTCAGAAGCATTC+GGG 0.385357 3_2:+11813615 Msa0395340:CDS
TTGCATTCTCCTCTTGATCC+TGG 0.392166 3_2:+11815967 Msa0395340:CDS
ATAATGAAATAAAGAACTAT+TGG 0.392597 3_2:+11815539 Msa0395340:CDS
TTCTCGGGCAAAATTGTAAT+AGG 0.403233 3_2:-11815769 None:intergenic
GGGGTAGAAACTTGGTCAAC+AGG 0.408150 3_2:-11816800 None:intergenic
ACTGACCCTGCATCTCCCTT+TGG 0.411283 3_2:+11816387 Msa0395340:CDS
TTTATCCCATGAGTTTGTAT+TGG 0.414468 3_2:-11816448 None:intergenic
AAAGAGAGAAAATGGTACTT+AGG 0.421471 3_2:-11812015 None:intergenic
TGTTGTGCTCTTTCTTCGCT+CGG 0.424195 3_2:+11812104 Msa0395340:five_prime_UTR
ATGCTATTAGCAGAAATATC+AGG 0.424760 3_2:-11815793 None:intergenic
GAACGCTGTTCAGAAGCATT+CGG 0.427694 3_2:+11813614 Msa0395340:CDS
GAACTCTCACCTCCGTCAAC+AGG 0.428520 3_2:-11816327 None:intergenic
AGCAGAAATATCAGGATTCT+CGG 0.431318 3_2:-11815785 None:intergenic
CCAAGAAAAGACATTGTTGA+TGG 0.435314 3_2:-11815859 None:intergenic
AACCGGCTTTGGTGGCTGGG+GGG 0.436055 3_2:+11816107 Msa0395340:CDS
AAGAATAACATGAATGCATA+AGG 0.437700 3_2:-11817074 None:intergenic
TTAAGGCCAAATTTAAAGAA+AGG 0.440027 3_2:+11813684 Msa0395340:CDS
GAAGGGAAGAGAGGAGGTGG+TGG 0.440361 3_2:-11811962 None:intergenic
TATCTATATGATGAAATAGA+AGG 0.441280 3_2:-11812440 None:intergenic
TATCCAGAAACCGGCTTTGG+TGG 0.441737 3_2:+11816099 Msa0395340:CDS
GGAAGCATGGAGAAGGCAAC+TGG 0.444924 3_2:+11813592 Msa0395340:CDS
CCACATGGTGCGCAAGAGTC+CGG 0.446215 3_2:+11816189 Msa0395340:CDS
CAATATCCAGAAACCGGCTT+TGG 0.446614 3_2:+11816096 Msa0395340:CDS
TTCAACTCCTTCACAAACTT+CGG 0.452432 3_2:+11812134 Msa0395340:five_prime_UTR
CCACATGCTTATAATCTGTT+GGG 0.454130 3_2:-11816943 None:intergenic
GCCACATGCTTATAATCTGT+TGG 0.455345 3_2:-11816944 None:intergenic
CGAAGAAAGAGCACAACATT+GGG 0.455528 3_2:-11812099 None:intergenic
ATTATTTGGTGAAGAACAAC+CGG 0.458566 3_2:-11816208 None:intergenic
TGTTCTTCACCAAATAATAG+TGG 0.463312 3_2:+11816213 Msa0395340:CDS
GTTGCACCAAAGGGAGATGC+AGG 0.466644 3_2:-11816393 None:intergenic
GCCAGCCCGATGACGCCTCT+TGG 0.468187 3_2:-11815572 None:intergenic
CCCGGACCAAGAGGCGTCAT+CGG 0.469874 3_2:+11815566 Msa0395340:CDS
CCGGACCAAGAGGCGTCATC+GGG 0.470564 3_2:+11815567 Msa0395340:CDS
GATGGCACAGGATTGCAATA+TGG 0.472691 3_2:-11815841 None:intergenic
TTAGATGGGCAAATCACTTA+AGG 0.479321 3_2:+11813667 Msa0395340:CDS
CATTGATTCCACCAGTGCCT+TGG 0.480224 3_2:-11815651 None:intergenic
GACATCCAAGGCTGTGAAGT+TGG 0.483063 3_2:+11816059 Msa0395340:CDS
AGGAGGTGGTGGAAATGGAA+TGG 0.483928 3_2:-11811951 None:intergenic
ACCAAGAGGCGTCATCGGGC+TGG 0.485549 3_2:+11815571 Msa0395340:CDS
GATTGGCATGAGCAGTGCTA+TGG 0.486316 3_2:+11816887 Msa0395340:CDS
GGGACTTATTCTTCAAGTAC+AGG 0.486682 3_2:+11816971 Msa0395340:CDS
ACAGACTCATTCAGTGGAGA+TGG 0.487994 3_2:-11816141 None:intergenic
GGTGGAGTTGTTCTGAAGAA+AGG 0.488612 3_2:+11813525 Msa0395340:CDS
TGAACATGAATGAGACAGAA+TGG 0.495262 3_2:+11816355 Msa0395340:CDS
GTTTGTGAAGGAGTTGAAGA+AGG 0.496505 3_2:-11812129 None:intergenic
TCACTCCAATATCCAGAAAC+CGG 0.496933 3_2:+11816090 Msa0395340:CDS
AAAGACATTGTTGATGGCAC+AGG 0.499006 3_2:-11815853 None:intergenic
GACAATTTGAAGGAAAATCA+GGG 0.502694 3_2:+11815739 Msa0395340:CDS
CAGACTCATTCAGTGGAGAT+GGG 0.504118 3_2:-11816140 None:intergenic
AGAGGAATTGCCATTTGATA+CGG 0.505395 3_2:-11816025 None:intergenic
TACCGCCATTCCGTATCAAA+TGG 0.505543 3_2:+11816015 Msa0395340:CDS
CAGGATTGAGGTTGCACCAA+AGG 0.505711 3_2:-11816403 None:intergenic
TCTGAAGCTAACATGACATC+TGG 0.511041 3_2:-11816866 None:intergenic
GTTCGTTTGCGAACAATGAA+AGG 0.514427 3_2:+11815616 Msa0395340:CDS
GAGTTATGTGAGGGGAGACC+AGG 0.515161 3_2:-11815985 None:intergenic
GCGAAGAAAGAGCACAACAT+TGG 0.515978 3_2:-11812100 None:intergenic
AGTAAACATGGCCAAGGCAC+TGG 0.516230 3_2:+11815640 Msa0395340:CDS
GAGCTCCAACTTCACAGCCT+TGG 0.521427 3_2:-11816064 None:intergenic
TTCGTTTGCGAACAATGAAA+GGG 0.522274 3_2:+11815617 Msa0395340:CDS
CCGATGACGCCTCTTGGTCC+GGG 0.523404 3_2:-11815566 None:intergenic
GTGGAGTTGTTCTGAAGAAA+GGG 0.523448 3_2:+11813526 Msa0395340:CDS
GGGAAACAGATGGGCACGTA+TGG 0.525456 3_2:+11813758 Msa0395340:CDS
AGGATTGAGGTTGCACCAAA+GGG 0.525462 3_2:-11816402 None:intergenic
AACTTCACAGCCTTGGATGT+CGG 0.525914 3_2:-11816057 None:intergenic
AATGAAGGGAAGAGAGGAGG+TGG 0.527612 3_2:-11811965 None:intergenic
ATGTCATGTTAGCTTCAGAT+TGG 0.528468 3_2:+11816870 Msa0395340:CDS
ATGGCACTCATTCAGGATTG+AGG 0.529262 3_2:-11816415 None:intergenic
GGAATCAATGATGGTGATAG+AGG 0.529519 3_2:+11815664 Msa0395340:CDS
TTAACACCAATACAAACTCA+TGG 0.531847 3_2:+11816442 Msa0395340:CDS
GTTGACTACGTCAGGAAGCA+TGG 0.533184 3_2:+11813579 Msa0395340:CDS
GCAGAAATATCAGGATTCTC+GGG 0.538825 3_2:-11815784 None:intergenic
TGTCTATGTTGAACATCACT+TGG 0.540716 3_2:+11816843 Msa0395340:CDS
ATTCCGAAATGGGAAACAGA+TGG 0.543249 3_2:+11813748 Msa0395340:CDS
TGTTGGGTTGTCACTAGCCT+CGG 0.544008 3_2:-11816927 None:intergenic
CAAACACGGTCACGGTCGAA+TGG 0.545036 3_2:+11813477 Msa0395340:CDS
CGGTCGAATGGTGAGGGTAA+CGG 0.547843 3_2:+11813489 Msa0395340:CDS
ATTGGCATGAGCAGTGCTAT+GGG 0.550093 3_2:+11816888 Msa0395340:CDS
TCTTGCGCACCATGTGGCAG+AGG 0.550222 3_2:-11816183 None:intergenic
ACAGATTATAAGCATGTGGC+TGG 0.550488 3_2:+11816947 Msa0395340:CDS
TTCCGAAATGGGAAACAGAT+GGG 0.553867 3_2:+11813749 Msa0395340:CDS
GTTTCTGGATATTGGAGTGA+AGG 0.556016 3_2:-11816087 None:intergenic
TGTTCAACATAGACAAAGAT+CGG 0.557533 3_2:-11816835 None:intergenic
TCTACTACAACTCCTGTTGA+CGG 0.564833 3_2:+11816315 Msa0395340:CDS
GAATAATTTGTATAATGACA+TGG 0.566040 3_2:+11817177 Msa0395340:three_prime_UTR
ATTATAAGCATGTGGCTGGT+GGG 0.566498 3_2:+11816951 Msa0395340:CDS
GAACATGAATGAGACAGAAT+GGG 0.567198 3_2:+11816356 Msa0395340:CDS
TTGTTCTGAAGAAAGGGCCG+TGG 0.569423 3_2:+11813532 Msa0395340:CDS
AGTGATTTGCCCATCTAAGA+CGG 0.570178 3_2:-11813662 None:intergenic
GATTATAAGCATGTGGCTGG+TGG 0.575177 3_2:+11816950 Msa0395340:CDS
CATTCGGGCTTGTCTCGTTG+TGG 0.575251 3_2:+11813630 Msa0395340:CDS
AATTGCCATTTGATACGGAA+TGG 0.575303 3_2:-11816020 None:intergenic
CGAACTTCTGGAGGATAGAG+TGG 0.579102 3_2:-11815598 None:intergenic
TACGTCAGGAAGCATGGAGA+AGG 0.579724 3_2:+11813585 Msa0395340:CDS
AGACTCATTCAGTGGAGATG+GGG 0.580513 3_2:-11816139 None:intergenic
CAGAACTATGATCCTGAACA+TGG 0.580858 3_2:-11815921 None:intergenic
TACTTCTAAGCCGACATCCA+AGG 0.581030 3_2:+11816047 Msa0395340:CDS
AGGATCATTTACTGCTGATG+AGG 0.581122 3_2:+11813704 Msa0395340:CDS
GAGGGGAGACCAGGATCAAG+AGG 0.581130 3_2:-11815976 None:intergenic
TTTCTGGATATTGGAGTGAA+GGG 0.581747 3_2:-11816086 None:intergenic
AACGGAGGAAGTGTTAATGG+TGG 0.584165 3_2:+11813507 Msa0395340:CDS
GCAATGATCAAACACGGTCA+CGG 0.585404 3_2:+11813469 Msa0395340:CDS
TAAAGAACTATTGGAATACC+CGG 0.592308 3_2:+11815548 Msa0395340:CDS
TAACCACTAAAGTTCTGAGC+AGG 0.593277 3_2:-11816477 None:intergenic
TTGTATTGGTGTTAACAGCA+TGG 0.595840 3_2:-11816434 None:intergenic
GGACTTATTCTTCAAGTACA+GGG 0.596006 3_2:+11816972 Msa0395340:CDS
AAATAATAGTGGCACGCTCG+AGG 0.597636 3_2:+11816224 Msa0395340:CDS
GTAATGAATTTAAGATCCAA+AGG 0.604364 3_2:-11812495 None:intergenic
AATCAGTCTCCTCTGCCACA+TGG 0.606298 3_2:+11816174 Msa0395340:CDS
TAACACCAATACAAACTCAT+GGG 0.608765 3_2:+11816443 Msa0395340:CDS
ACGGTCACGGTCGAATGGTG+AGG 0.609707 3_2:+11813482 Msa0395340:CDS
GGATGTCGGCTTAGAAGTAG+AGG 0.610617 3_2:-11816043 None:intergenic
AAAGGGAGTAAACATGGCCA+AGG 0.613145 3_2:+11815634 Msa0395340:CDS
GCGTCTTCTGCAGATGTCCA+CGG 0.613237 3_2:-11813549 None:intergenic
ATTTCATTATCTGTACGACC+AGG 0.614489 3_2:-11815526 None:intergenic
AAACATGGCCAAGGCACTGG+TGG 0.614540 3_2:+11815643 Msa0395340:CDS
GGCACTGGTGGAATCAATGA+TGG 0.615452 3_2:+11815655 Msa0395340:CDS
GACTCATTCAGTGGAGATGG+GGG 0.616024 3_2:-11816138 None:intergenic
TAATACATCGAGTTATGTGA+GGG 0.620385 3_2:-11815994 None:intergenic
ACATCAACAGACTCATTCAG+TGG 0.622129 3_2:-11816147 None:intergenic
GATAGGTGGTAGCATCCCAT+AGG 0.626694 3_2:+11811917 None:intergenic
CGGTCACGGTCGAATGGTGA+GGG 0.628700 3_2:+11813483 Msa0395340:CDS
GGCACAGGATTGCAATATGG+AGG 0.630900 3_2:-11815838 None:intergenic
GAATCAATGATGGTGATAGA+GGG 0.631416 3_2:+11815665 Msa0395340:CDS
ACAATGAAAGGGAGTAAACA+TGG 0.633095 3_2:+11815628 Msa0395340:CDS
GTAATACATCGAGTTATGTG+AGG 0.644113 3_2:-11815995 None:intergenic
CCCAACAGATTATAAGCATG+TGG 0.647208 3_2:+11816943 Msa0395340:CDS
ATCCAGACCGAAGTTTGTGA+AGG 0.648530 3_2:-11812141 None:intergenic
GACTTATTCTTCAAGTACAG+GGG 0.651682 3_2:+11816973 Msa0395340:CDS
GTTCGCAAACGAACTTCTGG+AGG 0.658612 3_2:-11815607 None:intergenic
TGCCATTTGATACGGAATGG+CGG 0.662997 3_2:-11816017 None:intergenic
TGCTCTGCAATGATCAAACA+CGG 0.665786 3_2:+11813463 Msa0395340:CDS
ATTGGAATACCCGGACCAAG+AGG 0.666025 3_2:+11815557 Msa0395340:CDS
ACTTATTCTTCAAGTACAGG+GGG 0.671833 3_2:+11816974 Msa0395340:CDS
CCGGACTCTTGCGCACCATG+TGG 0.683210 3_2:-11816189 None:intergenic
TTGCACCAAAGGGAGATGCA+GGG 0.696277 3_2:-11816392 None:intergenic
ACTACAACTCCTGTTGACGG+AGG 0.707521 3_2:+11816318 Msa0395340:CDS
TCGAATGGTGAGGGTAACGG+AGG 0.709659 3_2:+11813492 Msa0395340:CDS
AATACATCGAGTTATGTGAG+GGG 0.751807 3_2:-11815993 None:intergenic
GCACGAGAAGAACATGACCG+AGG 0.769618 3_2:+11816910 Msa0395340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATGTTAAACAATTTAA+TGG + chr3_2:11812307-11812326 Msa0395340:intron 10.0%
!! TTAATGTTAAACAATTTAAT+GGG + chr3_2:11812308-11812327 Msa0395340:intron 10.0%
!!! TTCATTTCATTTTAATTTTT+TGG + chr3_2:11813347-11813366 Msa0395340:intron 10.0%
!!! TTTTTAAGTAATTTAATTTG+TGG + chr3_2:11813371-11813390 Msa0395340:intron 10.0%
!!! TATTTTATTTCATATAGATA+GGG - chr3_2:11813975-11813994 None:intergenic 10.0%
!! ATCAATTATATCAATAAAAA+TGG + chr3_2:11815228-11815247 Msa0395340:intron 10.0%
!!! TGTTAATTTATTTTTGATGT+AGG + chr3_2:11812365-11812384 Msa0395340:intron 15.0%
!! TATCACAAAATAATTAACAT+GGG - chr3_2:11812649-11812668 None:intergenic 15.0%
!! TTATCACAAAATAATTAACA+TGG - chr3_2:11812650-11812669 None:intergenic 15.0%
!! TAATAAATAATTACTACCAA+AGG - chr3_2:11812731-11812750 None:intergenic 15.0%
!!! AGAGTTTTTATGAATTAATT+AGG + chr3_2:11812839-11812858 Msa0395340:intron 15.0%
!!! ACATTAATTGCTTTTTATAA+AGG + chr3_2:11813322-11813341 Msa0395340:intron 15.0%
!!! CATTAATTGCTTTTTATAAA+GGG + chr3_2:11813323-11813342 Msa0395340:intron 15.0%
!!! CTATTTTATTTCATATAGAT+AGG - chr3_2:11813976-11813995 None:intergenic 15.0%
!! AAAAAAAAAAATTACATCGA+CGG - chr3_2:11814090-11814109 None:intergenic 15.0%
!! TTAAATAATCTAAATACGTA+CGG + chr3_2:11814234-11814253 Msa0395340:intron 15.0%
!!! CACAATTTTTTAATATCAAA+TGG - chr3_2:11814332-11814351 None:intergenic 15.0%
!! TAATATATGTATTTGAACAT+TGG + chr3_2:11814778-11814797 Msa0395340:intron 15.0%
!!! AAGAAAGAAAAATTATCTTT+TGG - chr3_2:11814948-11814967 None:intergenic 15.0%
!!! TAAAAAATAATCATGGATTA+AGG - chr3_2:11815480-11815499 None:intergenic 15.0%
!! TCAATCATAAAAAATAATCA+TGG - chr3_2:11815487-11815506 None:intergenic 15.0%
!! ATAATGAAATAAAGAACTAT+TGG + chr3_2:11815539-11815558 Msa0395340:CDS 15.0%
!! AAATAAATACTTAAAATCAG+TGG + chr3_2:11816661-11816680 Msa0395340:intron 15.0%
!! AATGAGAAAGAAAAAATGAA+GGG - chr3_2:11811982-11812001 None:intergenic 20.0%
!! GAAATAGAGAAAAAACATAT+TGG - chr3_2:11812192-11812211 None:intergenic 20.0%
!! TATCTATATGATGAAATAGA+AGG - chr3_2:11812443-11812462 None:intergenic 20.0%
!!! TAGATAGATTGTTCTTTTAT+TGG + chr3_2:11812457-11812476 Msa0395340:five_prime_UTR 20.0%
!!! AGATAGATTGTTCTTTTATT+GGG + chr3_2:11812458-11812477 Msa0395340:five_prime_UTR 20.0%
!!! GTTTTTATGAATTAATTAGG+TGG + chr3_2:11812842-11812861 Msa0395340:intron 20.0%
!!! ATTTATTTTACTTCCTGATT+TGG + chr3_2:11812982-11813001 Msa0395340:intron 20.0%
!! CAAAACTAAGATCTAAATAA+TGG + chr3_2:11813284-11813303 Msa0395340:intron 20.0%
!! AATGATCCTTTCTTTAAATT+TGG - chr3_2:11813693-11813712 None:intergenic 20.0%
!!! AACTTTAGAAGTAGTTATTA+AGG + chr3_2:11814147-11814166 Msa0395340:intron 20.0%
!! TCAAGAAAGAAAGAAAAAAA+TGG - chr3_2:11814808-11814827 None:intergenic 20.0%
!! ATATGATATGATATGATCTA+AGG - chr3_2:11814988-11815007 None:intergenic 20.0%
!! CTATTCCAAAATTTATAAGT+TGG + chr3_2:11815122-11815141 Msa0395340:intron 20.0%
!!! CTTTTCCAACTTATAAATTT+TGG - chr3_2:11815130-11815149 None:intergenic 20.0%
!! AATAGAAGCAAAAAATCATT+GGG - chr3_2:11815443-11815462 None:intergenic 20.0%
!! TAATAGAAGCAAAAAATCAT+TGG - chr3_2:11815444-11815463 None:intergenic 20.0%
!!! GAACAATTGTTATTTGAATT+TGG - chr3_2:11816276-11816295 None:intergenic 20.0%
!! AACTAAAAACAGAAACTAAA+GGG - chr3_2:11816695-11816714 None:intergenic 20.0%
!! AAACTAAAAACAGAAACTAA+AGG - chr3_2:11816696-11816715 None:intergenic 20.0%
!!! GAATAATTTGTATAATGACA+TGG + chr3_2:11817177-11817196 Msa0395340:three_prime_UTR 20.0%
! GAATGAGAAAGAAAAAATGA+AGG - chr3_2:11811983-11812002 None:intergenic 25.0%
! ATTTCATTCTTGCACTTAAA+TGG + chr3_2:11812207-11812226 Msa0395340:intron 25.0%
! TTTCATTCTTGCACTTAAAT+GGG + chr3_2:11812208-11812227 Msa0395340:intron 25.0%
!! ATTTTTGATGTAGGAATTTC+AGG + chr3_2:11812374-11812393 Msa0395340:intron 25.0%
!! TTTTTGATGTAGGAATTTCA+GGG + chr3_2:11812375-11812394 Msa0395340:intron 25.0%
!! GTAATGAATTTAAGATCCAA+AGG - chr3_2:11812498-11812517 None:intergenic 25.0%
! TTACTATCACTTTCTATTTC+AGG + chr3_2:11812514-11812533 Msa0395340:five_prime_UTR 25.0%
!! AATACTTGTTTAAAGCAACT+TGG - chr3_2:11812680-11812699 None:intergenic 25.0%
! TTTATTAAGTTCCTTTCCTT+TGG + chr3_2:11812712-11812731 Msa0395340:intron 25.0%
! AATAATTACTACCAAAGGAA+AGG - chr3_2:11812726-11812745 None:intergenic 25.0%
! ATTATTTATACATGTTGAGC+TGG + chr3_2:11812747-11812766 Msa0395340:intron 25.0%
! TGTTGTTGTAAACAAGTATT+AGG + chr3_2:11812924-11812943 Msa0395340:intron 25.0%
! AACAAGTATTAGGATGTATT+AGG + chr3_2:11812934-11812953 Msa0395340:intron 25.0%
!! GATGTATTAGGAATTTTTGT+TGG + chr3_2:11812946-11812965 Msa0395340:intron 25.0%
! AAACTGCAATAAATCTTAGT+TGG + chr3_2:11813028-11813047 Msa0395340:intron 25.0%
! ACATAACTCTTTCATCTTAA+AGG + chr3_2:11813148-11813167 Msa0395340:intron 25.0%
! AATAATGGCAGAGTAAATTT+AGG + chr3_2:11813299-11813318 Msa0395340:intron 25.0%
! TTAAGGCCAAATTTAAAGAA+AGG + chr3_2:11813684-11813703 Msa0395340:CDS 25.0%
! GACAAATTAAACAGAAAACA+GGG - chr3_2:11813953-11813972 None:intergenic 25.0%
! TGTAGATAAATGAATGAAAC+TGG + chr3_2:11814034-11814053 Msa0395340:intron 25.0%
! AAATCTACAAAGATGTTACA+AGG - chr3_2:11814373-11814392 None:intergenic 25.0%
! TACTGCAATTACAAAACATT+GGG - chr3_2:11814886-11814905 None:intergenic 25.0%
! TTACTGCAATTACAAAACAT+TGG - chr3_2:11814887-11814906 None:intergenic 25.0%
! ATGGAATTTAGACAGTAATA+GGG - chr3_2:11815094-11815113 None:intergenic 25.0%
! AATGGAATTTAGACAGTAAT+AGG - chr3_2:11815095-11815114 None:intergenic 25.0%
! ATTACTGTCTAAATTCCATT+AGG + chr3_2:11815095-11815114 Msa0395340:intron 25.0%
! TGGATTAAGGAATTAATATG+TGG - chr3_2:11815467-11815486 None:intergenic 25.0%
! TGCAATATTTGACAATTTGA+AGG + chr3_2:11815729-11815748 Msa0395340:CDS 25.0%
! TGTCTTCTTCTGATAAATAA+TGG - chr3_2:11816250-11816269 None:intergenic 25.0%
! CAGGTTTAACTATTAGTATT+CGG - chr3_2:11816523-11816542 None:intergenic 25.0%
! ACTAAAAACAGAAACTAAAG+GGG - chr3_2:11816694-11816713 None:intergenic 25.0%
!! TTTTGCAAGGAATTACAAAA+TGG - chr3_2:11816735-11816754 None:intergenic 25.0%
! AAGAATAACATGAATGCATA+AGG - chr3_2:11817077-11817096 None:intergenic 25.0%
AAAGAGAGAAAATGGTACTT+AGG - chr3_2:11812018-11812037 None:intergenic 30.0%
CATATTGGATGAAACGAAAA+TGG - chr3_2:11812177-11812196 None:intergenic 30.0%
! ACTTGTTGAACTTTGAACAT+AGG + chr3_2:11812577-11812596 Msa0395340:intron 30.0%
!!! TTTTACTTCCTGATTTGGTA+AGG + chr3_2:11812987-11813006 Msa0395340:intron 30.0%
TAATTATGCCTTACCAAATC+AGG - chr3_2:11812998-11813017 None:intergenic 30.0%
!! CTTAGTTGGTTTCATTTTAG+TGG + chr3_2:11813042-11813061 Msa0395340:intron 30.0%
TTGATGAAATCCTGTAAATC+AGG - chr3_2:11813075-11813094 None:intergenic 30.0%
AACTCTTTCATCTTAAAGGA+TGG + chr3_2:11813152-11813171 Msa0395340:intron 30.0%
!! ATTTTGCTTGGCTTTTATTG+TGG + chr3_2:11813175-11813194 Msa0395340:intron 30.0%
!!! TTTAGATCTTAGTTTTGCGT+GGG - chr3_2:11813281-11813300 None:intergenic 30.0%
!!! ATTTAGATCTTAGTTTTGCG+TGG - chr3_2:11813282-11813301 None:intergenic 30.0%
GGACAAATTAAACAGAAAAC+AGG - chr3_2:11813954-11813973 None:intergenic 30.0%
!! CTTCTAAAGTTACACACATA+TGG - chr3_2:11814138-11814157 None:intergenic 30.0%
! TTGGAAACCTCCTTTTTATT+AGG - chr3_2:11814602-11814621 None:intergenic 30.0%
TCACATCATTCTTGAATTTG+TGG + chr3_2:11814632-11814651 Msa0395340:intron 30.0%
! ATCTTTTGGACTGAATGAAA+AGG - chr3_2:11814934-11814953 None:intergenic 30.0%
! ATAAGTTGGAAAAGCCTAAA+TGG + chr3_2:11815136-11815155 Msa0395340:intron 30.0%
TTTGAAAAACCAAAATGTCC+AGG - chr3_2:11815379-11815398 None:intergenic 30.0%
TAAAGAACTATTGGAATACC+CGG + chr3_2:11815548-11815567 Msa0395340:CDS 30.0%
!!! TGCATCTCATAGTTGTTTTT+CGG - chr3_2:11815706-11815725 None:intergenic 30.0%
TGACAATTTGAAGGAAAATC+AGG + chr3_2:11815738-11815757 Msa0395340:CDS 30.0%
GACAATTTGAAGGAAAATCA+GGG + chr3_2:11815739-11815758 Msa0395340:CDS 30.0%
ATGCTATTAGCAGAAATATC+AGG - chr3_2:11815796-11815815 None:intergenic 30.0%
! TTATCCATTTTACCATGTTC+AGG + chr3_2:11815909-11815928 Msa0395340:CDS 30.0%
TAATACATCGAGTTATGTGA+GGG - chr3_2:11815997-11816016 None:intergenic 30.0%
! ATTATTTGGTGAAGAACAAC+CGG - chr3_2:11816211-11816230 None:intergenic 30.0%
TGTTCTTCACCAAATAATAG+TGG + chr3_2:11816213-11816232 Msa0395340:CDS 30.0%
TTAACACCAATACAAACTCA+TGG + chr3_2:11816442-11816461 Msa0395340:CDS 30.0%
TAACACCAATACAAACTCAT+GGG + chr3_2:11816443-11816462 Msa0395340:CDS 30.0%
TTTATCCCATGAGTTTGTAT+TGG - chr3_2:11816451-11816470 None:intergenic 30.0%
ATTCGGTATACTGCATTAAA+AGG - chr3_2:11816506-11816525 None:intergenic 30.0%
! CGAATTTGAAAATGCTTTTC+AGG - chr3_2:11816542-11816561 None:intergenic 30.0%
AATATTTGTGAAGTCTTGCA+TGG - chr3_2:11816592-11816611 None:intergenic 30.0%
TGTTCAACATAGACAAAGAT+CGG - chr3_2:11816838-11816857 None:intergenic 30.0%
!!! CTTAGATAATGTGCTTTTTC+AGG + chr3_2:11817149-11817168 Msa0395340:three_prime_UTR 30.0%
!! ATGGAGATTTTGGTACCTAT+GGG - chr3_2:11811935-11811954 None:intergenic 35.0%
!! AATGGAGATTTTGGTACCTA+TGG - chr3_2:11811936-11811955 None:intergenic 35.0%
! TGGAAATGGAATGGAGATTT+TGG - chr3_2:11811945-11811964 None:intergenic 35.0%
AGAAAAAATGAAGGGAAGAG+AGG - chr3_2:11811974-11811993 None:intergenic 35.0%
AGTGAGAGAAAGAGAGAAAA+TGG - chr3_2:11812026-11812045 None:intergenic 35.0%
TTCAACTCCTTCACAAACTT+CGG + chr3_2:11812134-11812153 Msa0395340:five_prime_UTR 35.0%
! GAAACGAAAATGGTGGAAAA+TGG - chr3_2:11812167-11812186 None:intergenic 35.0%
ATTGGATGAAACGAAAATGG+TGG - chr3_2:11812174-11812193 None:intergenic 35.0%
GGAATTTCAGTTAACACCTT+TGG + chr3_2:11812479-11812498 Msa0395340:five_prime_UTR 35.0%
!! CTTAAAGGATGGATTTTGCT+TGG + chr3_2:11813163-11813182 Msa0395340:intron 35.0%
!!! TTAGATCTTAGTTTTGCGTG+GGG - chr3_2:11813280-11813299 None:intergenic 35.0%
AAAAAGTTGCCGTCTTAGAT+GGG + chr3_2:11813653-11813672 Msa0395340:CDS 35.0%
TTAGATGGGCAAATCACTTA+AGG + chr3_2:11813667-11813686 Msa0395340:CDS 35.0%
ACACGAAAACTAGAGATGTA+AGG - chr3_2:11813818-11813837 None:intergenic 35.0%
! TGCTATTTACCAATTGCCAT+AGG + chr3_2:11813881-11813900 Msa0395340:intron 35.0%
AAAATTACATCGACGGTCTA+TGG - chr3_2:11814083-11814102 None:intergenic 35.0%
TACGGTTTCATCTTAATAGC+TGG + chr3_2:11814252-11814271 Msa0395340:intron 35.0%
ACTGTCGAAGCCTAATAAAA+AGG + chr3_2:11814589-11814608 Msa0395340:intron 35.0%
GATATACACAGTTTGTCTGT+TGG - chr3_2:11814736-11814755 None:intergenic 35.0%
AAAACATTGGGTGATATGCA+AGG - chr3_2:11814874-11814893 None:intergenic 35.0%
AAAAGGTGAATGAGTTTAGC+AGG - chr3_2:11814917-11814936 None:intergenic 35.0%
! AGTACCTTTCTCGTCTTTTA+AGG + chr3_2:11815008-11815027 Msa0395340:intron 35.0%
ATGTCCTTAAAAGACGAGAA+AGG - chr3_2:11815015-11815034 None:intergenic 35.0%
!! TTTTAAGGACATGCTACTGT+CGG + chr3_2:11815023-11815042 Msa0395340:intron 35.0%
!!! TTTTGGAATAGAGCTCCTAA+TGG - chr3_2:11815113-11815132 None:intergenic 35.0%
TTGGAAAAGCCTAAATGGTA+AGG + chr3_2:11815141-11815160 Msa0395340:intron 35.0%
TGGAAAAGCCTAAATGGTAA+GGG + chr3_2:11815142-11815161 Msa0395340:intron 35.0%
CTTAACAACCCTTACCATTT+AGG - chr3_2:11815153-11815172 None:intergenic 35.0%
! GTGAGTTGAGTGAAAATATG+AGG + chr3_2:11815199-11815218 Msa0395340:intron 35.0%
ATGGTTGTCTTCTCGAAAAT+AGG + chr3_2:11815247-11815266 Msa0395340:intron 35.0%
GAGCTAAATCTGTGTGAAAA+AGG + chr3_2:11815292-11815311 Msa0395340:intron 35.0%
CTAAATCTGTGTGAAAAAGG+AGG + chr3_2:11815295-11815314 Msa0395340:intron 35.0%
! CAAAATGTCCAGGAGTATAT+AGG - chr3_2:11815369-11815388 None:intergenic 35.0%
! CTATATACTCCTGGACATTT+TGG + chr3_2:11815367-11815386 Msa0395340:intron 35.0%
TAAAGAACTATCCTCCATCA+AGG + chr3_2:11815399-11815418 Msa0395340:intron 35.0%
AAAGAACTATCCTCCATCAA+GGG + chr3_2:11815400-11815419 Msa0395340:intron 35.0%
!! TTCTTTTGCTTTTAGTTGCC+TGG + chr3_2:11815508-11815527 Msa0395340:intron 35.0%
ATTTCATTATCTGTACGACC+AGG - chr3_2:11815529-11815548 None:intergenic 35.0%
TTCGTTTGCGAACAATGAAA+GGG + chr3_2:11815617-11815636 Msa0395340:CDS 35.0%
ACAATGAAAGGGAGTAAACA+TGG + chr3_2:11815628-11815647 Msa0395340:CDS 35.0%
! GAATCAATGATGGTGATAGA+GGG + chr3_2:11815665-11815684 Msa0395340:CDS 35.0%
TTCTCGGGCAAAATTGTAAT+AGG - chr3_2:11815772-11815791 None:intergenic 35.0%
AGCAGAAATATCAGGATTCT+CGG - chr3_2:11815788-11815807 None:intergenic 35.0%
CCAAGAAAAGACATTGTTGA+TGG - chr3_2:11815862-11815881 None:intergenic 35.0%
! CCATCAACAATGTCTTTTCT+TGG + chr3_2:11815859-11815878 Msa0395340:CDS 35.0%
! ATGTCTTTTCTTGGTTCAAG+TGG + chr3_2:11815868-11815887 Msa0395340:CDS 35.0%
TGATCCTGAACATGGTAAAA+TGG - chr3_2:11815916-11815935 None:intergenic 35.0%
! GATAAGACTGCACAATCTTT+TGG + chr3_2:11815943-11815962 Msa0395340:CDS 35.0%
AATACATCGAGTTATGTGAG+GGG - chr3_2:11815996-11816015 None:intergenic 35.0%
GTAATACATCGAGTTATGTG+AGG - chr3_2:11815998-11816017 None:intergenic 35.0%
! AATTGCCATTTGATACGGAA+TGG - chr3_2:11816023-11816042 None:intergenic 35.0%
! AGAGGAATTGCCATTTGATA+CGG - chr3_2:11816028-11816047 None:intergenic 35.0%
TTTCTGGATATTGGAGTGAA+GGG - chr3_2:11816089-11816108 None:intergenic 35.0%
TGAACATGAATGAGACAGAA+TGG + chr3_2:11816355-11816374 Msa0395340:CDS 35.0%
GAACATGAATGAGACAGAAT+GGG + chr3_2:11816356-11816375 Msa0395340:CDS 35.0%
!! TTGTATTGGTGTTAACAGCA+TGG - chr3_2:11816437-11816456 None:intergenic 35.0%
CACACTTCAATATACACCTT+TGG + chr3_2:11816564-11816583 Msa0395340:intron 35.0%
! CTAACATCACAACTTTTGCA+AGG - chr3_2:11816748-11816767 None:intergenic 35.0%
GTGATGTTAGAAATTTCTGC+AGG + chr3_2:11816758-11816777 Msa0395340:intron 35.0%
!! AAGATCGGTTTTCACTGTTT+GGG - chr3_2:11816823-11816842 None:intergenic 35.0%
!! AAAGATCGGTTTTCACTGTT+TGG - chr3_2:11816824-11816843 None:intergenic 35.0%
TGTCTATGTTGAACATCACT+TGG + chr3_2:11816843-11816862 Msa0395340:CDS 35.0%
! ATGTCATGTTAGCTTCAGAT+TGG + chr3_2:11816870-11816889 Msa0395340:CDS 35.0%
CCACATGCTTATAATCTGTT+GGG - chr3_2:11816946-11816965 None:intergenic 35.0%
GGACTTATTCTTCAAGTACA+GGG + chr3_2:11816972-11816991 Msa0395340:CDS 35.0%
GACTTATTCTTCAAGTACAG+GGG + chr3_2:11816973-11816992 Msa0395340:CDS 35.0%
ACTTATTCTTCAAGTACAGG+GGG + chr3_2:11816974-11816993 Msa0395340:CDS 35.0%
AAAAATGAAGGGAAGAGAGG+AGG - chr3_2:11811971-11811990 None:intergenic 40.0%
! CGAAGAAAGAGCACAACATT+GGG - chr3_2:11812102-11812121 None:intergenic 40.0%
GTTTGTGAAGGAGTTGAAGA+AGG - chr3_2:11812132-11812151 None:intergenic 40.0%
CCTTATCTAGTAAGTCAGGT+CGG - chr3_2:11812806-11812825 None:intergenic 40.0%
! CAAGCCTTATCTAGTAAGTC+AGG - chr3_2:11812810-11812829 None:intergenic 40.0%
TGGTCTCTTTCCTGATTTAC+AGG + chr3_2:11813062-11813081 Msa0395340:intron 40.0%
!!! TAGATCTTAGTTTTGCGTGG+GGG - chr3_2:11813279-11813298 None:intergenic 40.0%
TGCTCTGCAATGATCAAACA+CGG + chr3_2:11813463-11813482 Msa0395340:CDS 40.0%
!! GTGGAGTTGTTCTGAAGAAA+GGG + chr3_2:11813526-11813545 Msa0395340:CDS 40.0%
! ATCTGCAGAAGACGCTATTT+TGG + chr3_2:11813557-11813576 Msa0395340:CDS 40.0%
!!! CTATTTTGGTTGACTACGTC+AGG + chr3_2:11813571-11813590 Msa0395340:CDS 40.0%
GAAAAAGTTGCCGTCTTAGA+TGG + chr3_2:11813652-11813671 Msa0395340:CDS 40.0%
! AGTGATTTGCCCATCTAAGA+CGG - chr3_2:11813665-11813684 None:intergenic 40.0%
AGGATCATTTACTGCTGATG+AGG + chr3_2:11813704-11813723 Msa0395340:CDS 40.0%
TGCTCAACTTCATTCCGAAA+TGG + chr3_2:11813737-11813756 Msa0395340:CDS 40.0%
GCTCAACTTCATTCCGAAAT+GGG + chr3_2:11813738-11813757 Msa0395340:CDS 40.0%
ATTCCGAAATGGGAAACAGA+TGG + chr3_2:11813748-11813767 Msa0395340:CDS 40.0%
TTCCGAAATGGGAAACAGAT+GGG + chr3_2:11813749-11813768 Msa0395340:CDS 40.0%
GCTCAGATATGAATGTCTTC+TGG - chr3_2:11814452-11814471 None:intergenic 40.0%
GTCGAAGCCTAATAAAAAGG+AGG + chr3_2:11814592-11814611 Msa0395340:intron 40.0%
AAAAGGAGGTTTCCAATGTC+AGG + chr3_2:11814606-11814625 Msa0395340:intron 40.0%
ATGATGTGATCACCTGACAT+TGG - chr3_2:11814621-11814640 None:intergenic 40.0%
TAATAGGGATTCTGCATGTG+GGG - chr3_2:11815079-11815098 None:intergenic 40.0%
GTAATAGGGATTCTGCATGT+GGG - chr3_2:11815080-11815099 None:intergenic 40.0%
AGTAATAGGGATTCTGCATG+TGG - chr3_2:11815081-11815100 None:intergenic 40.0%
AGATGCATCTCTCACTTTAG+AGG + chr3_2:11815270-11815289 Msa0395340:intron 40.0%
AACTGTGTCCTATATACTCC+TGG + chr3_2:11815358-11815377 Msa0395340:intron 40.0%
AAGAACTATCCTCCATCAAG+GGG + chr3_2:11815401-11815420 Msa0395340:intron 40.0%
ATTGTTCGCAAACGAACTTC+TGG - chr3_2:11815613-11815632 None:intergenic 40.0%
GTTCGTTTGCGAACAATGAA+AGG + chr3_2:11815616-11815635 Msa0395340:CDS 40.0%
! GGAATCAATGATGGTGATAG+AGG + chr3_2:11815664-11815683 Msa0395340:CDS 40.0%
GCAGAAATATCAGGATTCTC+GGG - chr3_2:11815787-11815806 None:intergenic 40.0%
!! AAAGACATTGTTGATGGCAC+AGG - chr3_2:11815856-11815875 None:intergenic 40.0%
CAAGTGGAACGAACAAGAAT+TGG + chr3_2:11815884-11815903 Msa0395340:CDS 40.0%
CAGAACTATGATCCTGAACA+TGG - chr3_2:11815924-11815943 None:intergenic 40.0%
! GTTTCTGGATATTGGAGTGA+AGG - chr3_2:11816090-11816109 None:intergenic 40.0%
TCACTCCAATATCCAGAAAC+CGG + chr3_2:11816090-11816109 Msa0395340:CDS 40.0%
ACATCAACAGACTCATTCAG+TGG - chr3_2:11816150-11816169 None:intergenic 40.0%
TCTACTACAACTCCTGTTGA+CGG + chr3_2:11816315-11816334 Msa0395340:CDS 40.0%
ATACCTGCTCAGAACTTTAG+TGG + chr3_2:11816474-11816493 Msa0395340:CDS 40.0%
!! TAACCACTAAAGTTCTGAGC+AGG - chr3_2:11816480-11816499 None:intergenic 40.0%
!! AGATCGGTTTTCACTGTTTG+GGG - chr3_2:11816822-11816841 None:intergenic 40.0%
! TCTGAAGCTAACATGACATC+TGG - chr3_2:11816869-11816888 None:intergenic 40.0%
CCCAACAGATTATAAGCATG+TGG + chr3_2:11816943-11816962 Msa0395340:CDS 40.0%
GCCACATGCTTATAATCTGT+TGG - chr3_2:11816947-11816966 None:intergenic 40.0%
ACAGATTATAAGCATGTGGC+TGG + chr3_2:11816947-11816966 Msa0395340:CDS 40.0%
ATTATAAGCATGTGGCTGGT+GGG + chr3_2:11816951-11816970 Msa0395340:CDS 40.0%
GGGACTTATTCTTCAAGTAC+AGG + chr3_2:11816971-11816990 Msa0395340:CDS 40.0%
TGACATGGCACTTGAAACTT+TGG + chr3_2:11817192-11817211 Msa0395340:three_prime_UTR 40.0%
! GCGAAGAAAGAGCACAACAT+TGG - chr3_2:11812103-11812122 None:intergenic 45.0%
TGTTGTGCTCTTTCTTCGCT+CGG + chr3_2:11812104-11812123 Msa0395340:five_prime_UTR 45.0%
ATCCAGACCGAAGTTTGTGA+AGG - chr3_2:11812144-11812163 None:intergenic 45.0%
CCGACCTGACTTACTAGATA+AGG + chr3_2:11812803-11812822 Msa0395340:intron 45.0%
GCAATGATCAAACACGGTCA+CGG + chr3_2:11813469-11813488 Msa0395340:CDS 45.0%
!! GGTAACGGAGGAAGTGTTAA+TGG + chr3_2:11813504-11813523 Msa0395340:CDS 45.0%
!! AACGGAGGAAGTGTTAATGG+TGG + chr3_2:11813507-11813526 Msa0395340:CDS 45.0%
!! GGTGGAGTTGTTCTGAAGAA+AGG + chr3_2:11813525-11813544 Msa0395340:CDS 45.0%
!! GAACGCTGTTCAGAAGCATT+CGG + chr3_2:11813614-11813633 Msa0395340:CDS 45.0%
!! AACGCTGTTCAGAAGCATTC+GGG + chr3_2:11813615-11813634 Msa0395340:CDS 45.0%
TGCCCATCTGTTTCCCATTT+CGG - chr3_2:11813754-11813773 None:intergenic 45.0%
CTGACATCACCTATGGCAAT+TGG - chr3_2:11813893-11813912 None:intergenic 45.0%
CACATCACTGACATCACCTA+TGG - chr3_2:11813900-11813919 None:intergenic 45.0%
AATAGGGATTCTGCATGTGG+GGG - chr3_2:11815078-11815097 None:intergenic 45.0%
AAAGGGAGTAAACATGGCCA+AGG + chr3_2:11815634-11815653 Msa0395340:CDS 45.0%
GATGGCACAGGATTGCAATA+TGG - chr3_2:11815844-11815863 None:intergenic 45.0%
TTGCATTCTCCTCTTGATCC+TGG + chr3_2:11815967-11815986 Msa0395340:CDS 45.0%
TACCGCCATTCCGTATCAAA+TGG + chr3_2:11816015-11816034 Msa0395340:CDS 45.0%
! TGCCATTTGATACGGAATGG+CGG - chr3_2:11816020-11816039 None:intergenic 45.0%
TACTTCTAAGCCGACATCCA+AGG + chr3_2:11816047-11816066 Msa0395340:CDS 45.0%
AACTTCACAGCCTTGGATGT+CGG - chr3_2:11816060-11816079 None:intergenic 45.0%
! CAAAGCCGGTTTCTGGATAT+TGG - chr3_2:11816098-11816117 None:intergenic 45.0%
! CAATATCCAGAAACCGGCTT+TGG + chr3_2:11816096-11816115 Msa0395340:CDS 45.0%
AGACTCATTCAGTGGAGATG+GGG - chr3_2:11816142-11816161 None:intergenic 45.0%
CAGACTCATTCAGTGGAGAT+GGG - chr3_2:11816143-11816162 None:intergenic 45.0%
ACAGACTCATTCAGTGGAGA+TGG - chr3_2:11816144-11816163 None:intergenic 45.0%
! TCGAGCGTGCCACTATTATT+TGG - chr3_2:11816225-11816244 None:intergenic 45.0%
AAATAATAGTGGCACGCTCG+AGG + chr3_2:11816224-11816243 Msa0395340:CDS 45.0%
AGGATTGAGGTTGCACCAAA+GGG - chr3_2:11816405-11816424 None:intergenic 45.0%
ATGGCACTCATTCAGGATTG+AGG - chr3_2:11816418-11816437 None:intergenic 45.0%
TAACAGCATGGCACTCATTC+AGG - chr3_2:11816425-11816444 None:intergenic 45.0%
! CACTGTTTGGGGTAGAAACT+TGG - chr3_2:11816811-11816830 None:intergenic 45.0%
ATTGGCATGAGCAGTGCTAT+GGG + chr3_2:11816888-11816907 Msa0395340:CDS 45.0%
GATTATAAGCATGTGGCTGG+TGG + chr3_2:11816950-11816969 Msa0395340:CDS 45.0%
!!! TTTATTTAATTTTAGTTTTT+TGG + chr3_2:11812261-11812280 Msa0395340:intron 5.0%
!! ATAATTATGTTAATATATTT+CGG - chr3_2:11814527-11814546 None:intergenic 5.0%
!! AGGAGGTGGTGGAAATGGAA+TGG - chr3_2:11811954-11811973 None:intergenic 50.0%
!! AAGAGAGGAGGTGGTGGAAA+TGG - chr3_2:11811959-11811978 None:intergenic 50.0%
AATGAAGGGAAGAGAGGAGG+TGG - chr3_2:11811968-11811987 None:intergenic 50.0%
CTCCTTCACAAACTTCGGTC+TGG + chr3_2:11812139-11812158 Msa0395340:intron 50.0%
!! TTGTTCTGAAGAAAGGGCCG+TGG + chr3_2:11813532-11813551 Msa0395340:CDS 50.0%
GTTGACTACGTCAGGAAGCA+TGG + chr3_2:11813579-11813598 Msa0395340:CDS 50.0%
! TACGTCAGGAAGCATGGAGA+AGG + chr3_2:11813585-11813604 Msa0395340:CDS 50.0%
AAGGACATGCTACTGTCGGA+TGG + chr3_2:11815027-11815046 Msa0395340:intron 50.0%
AGGACATGCTACTGTCGGAT+GGG + chr3_2:11815028-11815047 Msa0395340:intron 50.0%
ATAGGGATTCTGCATGTGGG+GGG - chr3_2:11815077-11815096 None:intergenic 50.0%
ATTGGAATACCCGGACCAAG+AGG + chr3_2:11815557-11815576 Msa0395340:CDS 50.0%
! CGAACTTCTGGAGGATAGAG+TGG - chr3_2:11815601-11815620 None:intergenic 50.0%
GTTCGCAAACGAACTTCTGG+AGG - chr3_2:11815610-11815629 None:intergenic 50.0%
AGTAAACATGGCCAAGGCAC+TGG + chr3_2:11815640-11815659 Msa0395340:CDS 50.0%
!! CATTGATTCCACCAGTGCCT+TGG - chr3_2:11815654-11815673 None:intergenic 50.0%
!! GGCACTGGTGGAATCAATGA+TGG + chr3_2:11815655-11815674 Msa0395340:CDS 50.0%
GGCACAGGATTGCAATATGG+AGG - chr3_2:11815841-11815860 None:intergenic 50.0%
!! GGATGTCGGCTTAGAAGTAG+AGG - chr3_2:11816046-11816065 None:intergenic 50.0%
GACATCCAAGGCTGTGAAGT+TGG + chr3_2:11816059-11816078 Msa0395340:CDS 50.0%
! TATCCAGAAACCGGCTTTGG+TGG + chr3_2:11816099-11816118 Msa0395340:CDS 50.0%
GACTCATTCAGTGGAGATGG+GGG - chr3_2:11816141-11816160 None:intergenic 50.0%
AATCAGTCTCCTCTGCCACA+TGG + chr3_2:11816174-11816193 Msa0395340:CDS 50.0%
ACTACAACTCCTGTTGACGG+AGG + chr3_2:11816318-11816337 Msa0395340:CDS 50.0%
TTGCACCAAAGGGAGATGCA+GGG - chr3_2:11816395-11816414 None:intergenic 50.0%
CAGGATTGAGGTTGCACCAA+AGG - chr3_2:11816406-11816425 None:intergenic 50.0%
! GAAGTCTTGCATGGTGCCAA+AGG - chr3_2:11816583-11816602 None:intergenic 50.0%
GGGGTAGAAACTTGGTCAAC+AGG - chr3_2:11816803-11816822 None:intergenic 50.0%
GATTGGCATGAGCAGTGCTA+TGG + chr3_2:11816887-11816906 Msa0395340:CDS 50.0%
! TGTTGGGTTGTCACTAGCCT+CGG - chr3_2:11816930-11816949 None:intergenic 50.0%
!!! TTAGTTTTGCGTGGGGGACC+GGG - chr3_2:11813273-11813292 None:intergenic 55.0%
!!! CTTAGTTTTGCGTGGGGGAC+CGG - chr3_2:11813274-11813293 None:intergenic 55.0%
CAAACACGGTCACGGTCGAA+TGG + chr3_2:11813477-11813496 Msa0395340:CDS 55.0%
CGGTCGAATGGTGAGGGTAA+CGG + chr3_2:11813489-11813508 Msa0395340:CDS 55.0%
! TCGAATGGTGAGGGTAACGG+AGG + chr3_2:11813492-11813511 Msa0395340:CDS 55.0%
GCGTCTTCTGCAGATGTCCA+CGG - chr3_2:11813552-11813571 None:intergenic 55.0%
! GGAAGCATGGAGAAGGCAAC+TGG + chr3_2:11813592-11813611 Msa0395340:CDS 55.0%
CATTCGGGCTTGTCTCGTTG+TGG + chr3_2:11813630-11813649 Msa0395340:CDS 55.0%
GGGAAACAGATGGGCACGTA+TGG + chr3_2:11813758-11813777 Msa0395340:CDS 55.0%
GGACATGCTACTGTCGGATG+GGG + chr3_2:11815029-11815048 Msa0395340:intron 55.0%
!! AAACATGGCCAAGGCACTGG+TGG + chr3_2:11815643-11815662 Msa0395340:CDS 55.0%
GAGTTATGTGAGGGGAGACC+AGG - chr3_2:11815988-11816007 None:intergenic 55.0%
GAGCTCCAACTTCACAGCCT+TGG - chr3_2:11816067-11816086 None:intergenic 55.0%
! AGAAACCGGCTTTGGTGGCT+GGG + chr3_2:11816104-11816123 Msa0395340:CDS 55.0%
GAACTCTCACCTCCGTCAAC+AGG - chr3_2:11816330-11816349 None:intergenic 55.0%
ACTGACCCTGCATCTCCCTT+TGG + chr3_2:11816387-11816406 Msa0395340:CDS 55.0%
GTTGCACCAAAGGGAGATGC+AGG - chr3_2:11816396-11816415 None:intergenic 55.0%
GCACGAGAAGAACATGACCG+AGG + chr3_2:11816910-11816929 Msa0395340:CDS 55.0%
! AGGGGGTCGCTTTATGCACA+TGG + chr3_2:11816991-11817010 Msa0395340:CDS 55.0%
GAAGGGAAGAGAGGAGGTGG+TGG - chr3_2:11811965-11811984 None:intergenic 60.0%
TGTCGTGACGCGACATGTCC+CGG + chr3_2:11813252-11813271 Msa0395340:intron 60.0%
ACGGTCACGGTCGAATGGTG+AGG + chr3_2:11813482-11813501 Msa0395340:CDS 60.0%
CGGTCACGGTCGAATGGTGA+GGG + chr3_2:11813483-11813502 Msa0395340:CDS 60.0%
GATCAAATCCCCCGTGGCTG+TGG - chr3_2:11815055-11815074 None:intergenic 60.0%
GAGGGGAGACCAGGATCAAG+AGG - chr3_2:11815979-11815998 None:intergenic 60.0%
! CAGCCACCAAAGCCGGTTTC+TGG - chr3_2:11816105-11816124 None:intergenic 60.0%
! CAGAAACCGGCTTTGGTGGC+TGG + chr3_2:11816103-11816122 Msa0395340:CDS 60.0%
! GAAACCGGCTTTGGTGGCTG+GGG + chr3_2:11816105-11816124 Msa0395340:CDS 60.0%
! AAACCGGCTTTGGTGGCTGG+GGG + chr3_2:11816106-11816125 Msa0395340:CDS 60.0%
TCTTGCGCACCATGTGGCAG+AGG - chr3_2:11816186-11816205 None:intergenic 60.0%
CCACATGGTGCGCAAGAGTC+CGG + chr3_2:11816189-11816208 Msa0395340:CDS 60.0%
TGGGGGGATCAAATCCCCCG+TGG - chr3_2:11815061-11815080 None:intergenic 65.0%
CCGATGACGCCTCTTGGTCC+GGG - chr3_2:11815569-11815588 None:intergenic 65.0%
!! CCCGGACCAAGAGGCGTCAT+CGG + chr3_2:11815566-11815585 Msa0395340:CDS 65.0%
CCCGATGACGCCTCTTGGTC+CGG - chr3_2:11815570-11815589 None:intergenic 65.0%
!! CCGGACCAAGAGGCGTCATC+GGG + chr3_2:11815567-11815586 Msa0395340:CDS 65.0%
!! ACCAAGAGGCGTCATCGGGC+TGG + chr3_2:11815571-11815590 Msa0395340:CDS 65.0%
! AACCGGCTTTGGTGGCTGGG+GGG + chr3_2:11816107-11816126 Msa0395340:CDS 65.0%
CCGGACTCTTGCGCACCATG+TGG - chr3_2:11816192-11816211 None:intergenic 65.0%
GTCGGATGGGGCCACAGCCA+CGG + chr3_2:11815041-11815060 Msa0395340:intron 70.0%
TCGGATGGGGCCACAGCCAC+GGG + chr3_2:11815042-11815061 Msa0395340:intron 70.0%
GCCAGCCCGATGACGCCTCT+TGG - chr3_2:11815575-11815594 None:intergenic 70.0%
! ACCGGCTTTGGTGGCTGGGG+GGG + chr3_2:11816108-11816127 Msa0395340:CDS 70.0%
ACCCCCCCAGCCACCAAAGC+CGG - chr3_2:11816112-11816131 None:intergenic 70.0%
CGGATGGGGCCACAGCCACG+GGG + chr3_2:11815043-11815062 Msa0395340:intron 75.0%
GGATGGGGCCACAGCCACGG+GGG + chr3_2:11815044-11815063 Msa0395340:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 11811925 11817233 11811925 ID=Msa0395340;Name=Msa0395340
chr3_2 mRNA 11811925 11817233 11811925 ID=Msa0395340-mRNA-1;Parent=Msa0395340;Name=Msa0395340-mRNA-1;_AED=0.23;_eAED=0.23;_QI=397|1|1|1|0.5|0.4|5|215|523
chr3_2 exon 11811925 11812155 11811925 ID=Msa0395340-mRNA-1:exon:2783;Parent=Msa0395340-mRNA-1
chr3_2 exon 11812387 11812535 11812387 ID=Msa0395340-mRNA-1:exon:2784;Parent=Msa0395340-mRNA-1
chr3_2 exon 11813412 11813788 11813412 ID=Msa0395340-mRNA-1:exon:2785;Parent=Msa0395340-mRNA-1
chr3_2 exon 11815523 11816495 11815523 ID=Msa0395340-mRNA-1:exon:2786;Parent=Msa0395340-mRNA-1
chr3_2 exon 11816780 11817233 11816780 ID=Msa0395340-mRNA-1:exon:2787;Parent=Msa0395340-mRNA-1
chr3_2 five_prime_UTR 11811925 11812155 11811925 ID=Msa0395340-mRNA-1:five_prime_utr;Parent=Msa0395340-mRNA-1
chr3_2 five_prime_UTR 11812387 11812535 11812387 ID=Msa0395340-mRNA-1:five_prime_utr;Parent=Msa0395340-mRNA-1
chr3_2 five_prime_UTR 11813412 11813428 11813412 ID=Msa0395340-mRNA-1:five_prime_utr;Parent=Msa0395340-mRNA-1
chr3_2 CDS 11813429 11813788 11813429 ID=Msa0395340-mRNA-1:cds;Parent=Msa0395340-mRNA-1
chr3_2 CDS 11815523 11816495 11815523 ID=Msa0395340-mRNA-1:cds;Parent=Msa0395340-mRNA-1
chr3_2 CDS 11816780 11817018 11816780 ID=Msa0395340-mRNA-1:cds;Parent=Msa0395340-mRNA-1
chr3_2 three_prime_UTR 11817019 11817233 11817019 ID=Msa0395340-mRNA-1:three_prime_utr;Parent=Msa0395340-mRNA-1
Gene Sequence

>Msa0395340

ATGAGTCGAGTGAAAAATGAGATTGAAGATGATATGCTCTGCAATGATCAAACACGGTCACGGTCGAATGGTGAGGGTAACGGAGGAAGTGTTAATGGTGGAGTTGTTCTGAAGAAAGGGCCGTGGACATCTGCAGAAGACGCTATTTTGGTTGACTACGTCAGGAAGCATGGAGAAGGCAACTGGAACGCTGTTCAGAAGCATTCGGGCTTGTCTCGTTGTGGAAAAAGTTGCCGTCTTAGATGGGCAAATCACTTAAGGCCAAATTTAAAGAAAGGATCATTTACTGCTGATGAGGAGCATTTAATTGCTCAACTTCATTCCGAAATGGGAAACAGATGGGCACGTATGGCTGCGCACTTGCCTGGTCGTACAGATAATGAAATAAAGAACTATTGGAATACCCGGACCAAGAGGCGTCATCGGGCTGGCTTGCCACTCTATCCTCCAGAAGTTCGTTTGCGAACAATGAAAGGGAGTAAACATGGCCAAGGCACTGGTGGAATCAATGATGGTGATAGAGGGCATCATGATTTCTTGCCGAAAAACAACTATGAGATGCATGATGCAATATTTGACAATTTGAAGGAAAATCAGGGAATCTTGCCTATTACAATTTTGCCCGAGAATCCTGATATTTCTGCTAATAGCATTATGCGAAACAGTCTTGATTCTCCTCCATATTGCAATCCTGTGCCATCAACAATGTCTTTTCTTGGTTCAAGTGGAACGAACAAGAATTGGTTTTATCCATTTTACCATGTTCAGGATCATAGTTCTGATAAGACTGCACAATCTTTTGGATTGCATTCTCCTCTTGATCCTGGTCTCCCCTCACATAACTCGATGTATTACCGCCATTCCGTATCAAATGGCAATTCCTCTACTTCTAAGCCGACATCCAAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAAACCGGCTTTGGTGGCTGGGGGGGTAACTTTCCCCCATCTCCACTGAATGAGTCTGTTGATGTATTCAATCAGTCTCCTCTGCCACATGGTGCGCAAGAGTCCGGTTGTTCTTCACCAAATAATAGTGGCACGCTCGAGGCCATTATTTATCAGAAGAAGACACTTCCAAATTCAAATAACAATTGTTCTGACAAGAGTTCACATTCATCTACTACAACTCCTGTTGACGGAGGTGAGAGTTCTGCTTTGAACATGAATGAGACAGAATGGGATGACTACACTGACCCTGCATCTCCCTTTGGTGCAACCTCAATCCTGAATGAGTGCCATGCTGTTAACACCAATACAAACTCATGGGATAAATTGATACCTGCTCAGAACTTTAGTGGCAGCAATGTTAAATATGAGCCTGTTGACCAAGTTTCTACCCCAAACAGTGAAAACCGATCTTTGTCTATGTTGAACATCACTTGGCCAGATGTCATGTTAGCTTCAGATTGGCATGAGCAGTGCTATGGGCACGAGAAGAACATGACCGAGGCTAGTGACAACCCAACAGATTATAAGCATGTGGCTGGTGGGACTTATTCTTCAAGTACAGGGGGTCGCTTTATGCACATGGCATGA
Protein sequence

>Msa0395340

MSRVKNEIEDDMLCNDQTRSRSNGEGNGGSVNGGVVLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGSFTADEEHLIAQLHSEMGNRWARMAAHLPGRTDNEIKNYWNTRTKRRHRAGLPLYPPEVRLRTMKGSKHGQGTGGINDGDRGHHDFLPKNNYEMHDAIFDNLKENQGILPITILPENPDISANSIMRNSLDSPPYCNPVPSTMSFLGSSGTNKNWFYPFYHVQDHSSDKTAQSFGLHSPLDPGLPSHNSMYYRHSVSNGNSSTSKPTSKAVKLELPSLQYPETGFGGWGGNFPPSPLNESVDVFNQSPLPHGAQESGCSSPNNSGTLEAIIYQKKTLPNSNNNCSDKSSHSSTTTPVDGGESSALNMNETEWDDYTDPASPFGATSILNECHAVNTNTNSWDKLIPAQNFSGSNVKYEPVDQVSTPNSENRSLSMLNITWPDVMLASDWHEQCYGHEKNMTEASDNPTDYKHVAGGTYSSSTGGRFMHMA*