Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0399770 | XP_003599125.1 | 97.930 | 483 | 7 | 2 | 1 | 482 | 1 | 481 | 0.0 | 982 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0399770 | sp|E0X9N4|C3H69_ARATH | 49.864 | 369 | 152 | 9 | 1 | 357 | 1 | 348 | 3.54e-109 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0399770 | G7IWL7 | 97.930 | 483 | 7 | 2 | 1 | 482 | 1 | 481 | 0.0 | 982 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0399770 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0399770 | MtrunA17_Chr3g0087881 | 91.511 | 483 | 10 | 2 | 1 | 482 | 1 | 453 | 0.0 | 907 |
| Msa0399770 | MtrunA17_Chr3g0087891 | 52.888 | 329 | 126 | 8 | 1 | 307 | 1 | 322 | 7.49e-107 | 322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0399770 | AT3G08505.1 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 5.40e-100 | 303 |
| Msa0399770 | AT3G08505.2 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 5.40e-100 | 303 |
| Msa0399770 | AT3G08505.3 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 5.40e-100 | 303 |
Find 118 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGAGGCCATGGTTTC+TGG | 0.092914 | 3_2:+23351531 | Msa0399770:CDS |
| CCTGCATCCTACTGATAAAA+AGG | 0.246259 | 3_2:+23347781 | Msa0399770:CDS |
| GTTTCTGGGATAGATGATTT+TGG | 0.250360 | 3_2:+23351546 | Msa0399770:CDS |
| CAGAAAGGGTCTTGTGCTTA+TGG | 0.259648 | 3_2:+23347437 | Msa0399770:CDS |
| GATTCGCTGGCTGGCGGTTC+AGG | 0.263297 | 3_2:+23351351 | Msa0399770:CDS |
| GTGCTAAAGTAGCATCAAAT+TGG | 0.277566 | 3_2:+23347549 | Msa0399770:CDS |
| TAAGCCAAAACTCCTTAAAA+TGG | 0.290440 | 3_2:-23351863 | None:intergenic |
| AGCATCATCTTCAGCATCTA+TGG | 0.292528 | 3_2:+23347496 | Msa0399770:CDS |
| TTTGAGGACTTGTGACAAAA+AGG | 0.300862 | 3_2:+23347817 | Msa0399770:CDS |
| GCTCTTGGGATGGATGCTTT+TGG | 0.301364 | 3_2:+23351456 | Msa0399770:CDS |
| TTGTCATTCCAAGTGGTATT+TGG | 0.301592 | 3_2:+23348080 | Msa0399770:CDS |
| AAGCCATCAGAATGTAAGTT+TGG | 0.301620 | 3_2:+23347917 | Msa0399770:CDS |
| TGGCGGTTCAGGTCCTTGTT+TGG | 0.314287 | 3_2:+23351362 | Msa0399770:CDS |
| GGCGGTTCAGGTCCTTGTTT+GGG | 0.319796 | 3_2:+23351363 | Msa0399770:CDS |
| GGAAATGGAAATTGTCCATT+TGG | 0.321258 | 3_2:+23348289 | Msa0399770:CDS |
| TCCTCATCGTCATCGTCATC+AGG | 0.328553 | 3_2:-23351480 | None:intergenic |
| AGGTGACACAACTTAGTTAA+AGG | 0.354092 | 3_2:-23351751 | None:intergenic |
| ATGCAAGAGGCCATGGCTCT+TGG | 0.356930 | 3_2:+23351441 | Msa0399770:CDS |
| TATGATAGTTTGCGGCAAAC+AGG | 0.366308 | 3_2:-23348055 | None:intergenic |
| CAGAAAGCGTGATCACATTC+TGG | 0.369919 | 3_2:-23347947 | None:intergenic |
| GAAATGGAAATTGTCCATTT+GGG | 0.373127 | 3_2:+23348290 | Msa0399770:CDS |
| GTTTGTCATGTATTCGCAAT+TGG | 0.373825 | 3_2:+23347969 | Msa0399770:CDS |
| CGATTTCCATTGCAGAGGTT+GGG | 0.374375 | 3_2:-23348003 | None:intergenic |
| CCCTTTACACCACGCTTGTC+AGG | 0.379427 | 3_2:-23347599 | None:intergenic |
| AAACTTACATTCTGATGGCT+TGG | 0.395562 | 3_2:-23347915 | None:intergenic |
| CCTGACAAGCGTGGTGTAAA+GGG | 0.396694 | 3_2:+23347599 | Msa0399770:CDS |
| TGCAAGAGGCCATGGTTTCT+GGG | 0.408782 | 3_2:+23351532 | Msa0399770:CDS |
| AACTTACATTCTGATGGCTT+GGG | 0.410250 | 3_2:-23347914 | None:intergenic |
| AGAAGAAGAAGAAAAGTTGA+AGG | 0.411725 | 3_2:-23346373 | None:intergenic |
| GTTTAAAACTAGAGCATCAT+AGG | 0.415844 | 3_2:-23351714 | None:intergenic |
| TGCAAGAGGCCATGGCTCTT+GGG | 0.417374 | 3_2:+23351442 | Msa0399770:CDS |
| AATGATGATGCATTCTCATA+TGG | 0.418914 | 3_2:+23351617 | Msa0399770:CDS |
| TCAATTCCATGAAAATCATC+AGG | 0.425647 | 3_2:-23351570 | None:intergenic |
| TGATGAATATTAGATTTACT+TGG | 0.430199 | 3_2:+23351689 | Msa0399770:exon |
| ACCTGACAAGCGTGGTGTAA+AGG | 0.433230 | 3_2:+23347598 | Msa0399770:CDS |
| TCTTATCAAAATCATTTGGC+AGG | 0.435477 | 3_2:+23351780 | Msa0399770:three_prime_UTR |
| GATAATGCCATCATCTCAAA+TGG | 0.443626 | 3_2:-23351327 | None:intergenic |
| AAAATCTCACCATGTCCAAC+AGG | 0.444234 | 3_2:+23346433 | Msa0399770:exon |
| AGCCATCAGAATGTAAGTTT+GGG | 0.447348 | 3_2:+23347918 | Msa0399770:CDS |
| CCGATTTCCATTGCAGAGGT+TGG | 0.450187 | 3_2:-23348004 | None:intergenic |
| GATTCAGACGATGAGGATGA+TGG | 0.450779 | 3_2:+23351393 | Msa0399770:CDS |
| CCAACCTCTGCAATGGAAAT+CGG | 0.452415 | 3_2:+23348004 | Msa0399770:CDS |
| TTTGCTCTTATTATCAGAAA+GGG | 0.457240 | 3_2:+23347423 | Msa0399770:CDS |
| ACATGTCATGCATATCGAAA+TGG | 0.462288 | 3_2:-23351221 | None:intergenic |
| TGCTGCTATGCAAGAGGCCA+TGG | 0.469668 | 3_2:+23351434 | Msa0399770:CDS |
| ATTTGCTCTTATTATCAGAA+AGG | 0.469932 | 3_2:+23347422 | Msa0399770:CDS |
| ATAATACCCTATGAAAAGAT+TGG | 0.470582 | 3_2:+23351941 | Msa0399770:three_prime_UTR |
| GGGTTTACAACGCAAGCATC+AGG | 0.478209 | 3_2:+23347619 | Msa0399770:CDS |
| GCATTATCAGATTCGCTGGC+TGG | 0.489570 | 3_2:+23351342 | Msa0399770:CDS |
| TGCTAAAGTAGCATCAAATT+GGG | 0.490703 | 3_2:+23347550 | Msa0399770:CDS |
| AATGGATCCATTTGAGATGA+TGG | 0.491467 | 3_2:+23351320 | Msa0399770:CDS |
| GATTTCCATTGCAGAGGTTG+GGG | 0.493235 | 3_2:-23348002 | None:intergenic |
| TAGAAACAGCTAGCCCCAAA+TGG | 0.494880 | 3_2:-23348304 | None:intergenic |
| GGCTGCTATGCAAGAGGCCA+TGG | 0.495488 | 3_2:+23351524 | Msa0399770:CDS |
| TGGTCTAGCACTACCAGTAC+TGG | 0.497170 | 3_2:-23347663 | None:intergenic |
| TGTCTCCATGTGTATGAGCC+AGG | 0.499940 | 3_2:-23351168 | None:intergenic |
| TACCCTATGAAAAGATTGGT+TGG | 0.507116 | 3_2:+23351945 | Msa0399770:three_prime_UTR |
| TCCTCATCGTCTGAATCAAA+AGG | 0.507460 | 3_2:-23351387 | None:intergenic |
| GAAGGAACCTTTGTAACCTT+CGG | 0.509713 | 3_2:-23347575 | None:intergenic |
| AGGGCAGGTTCTCACTGTAT+TGG | 0.515799 | 3_2:-23348035 | None:intergenic |
| GATGGCATTATCAGATTCGC+TGG | 0.519486 | 3_2:+23351338 | Msa0399770:CDS |
| TAGTTTGCGGCAAACAGGGC+AGG | 0.521329 | 3_2:-23348050 | None:intergenic |
| TGACAAAATATGATAGTTTG+CGG | 0.523339 | 3_2:-23348063 | None:intergenic |
| AGGAAAAGGAAAATCATTTG+AGG | 0.527601 | 3_2:+23347801 | Msa0399770:CDS |
| AAAATCTGAGTCCCTCATGA+TGG | 0.533480 | 3_2:-23351289 | None:intergenic |
| TGGGGCTAGCTGTTTCTACA+AGG | 0.535393 | 3_2:+23348309 | Msa0399770:CDS |
| CTGATGGCTTGGGTTTCGAA+AGG | 0.535450 | 3_2:-23347904 | None:intergenic |
| ATTCAGACGATGAGGATGAT+GGG | 0.536703 | 3_2:+23351394 | Msa0399770:CDS |
| GCGCGAGGCGTATGTTTGAA+AGG | 0.542739 | 3_2:+23347101 | Msa0399770:CDS |
| TTTGCTGCTGCCAACTGCCC+CGG | 0.543300 | 3_2:+23347707 | Msa0399770:CDS |
| TTCAGATTCTGCTGCGCCTG+TGG | 0.544702 | 3_2:+23347520 | Msa0399770:CDS |
| AACCCAAACTTACATTCTGA+TGG | 0.549424 | 3_2:-23347920 | None:intergenic |
| TTTCAGCATACAGTGAAGCC+TGG | 0.555178 | 3_2:+23351150 | Msa0399770:intron |
| ATGATAGTTTGCGGCAAACA+GGG | 0.556192 | 3_2:-23348054 | None:intergenic |
| GATATCAAAGCTGCATCCAT+AGG | 0.558891 | 3_2:-23351594 | None:intergenic |
| TCAAATTGCTGCTATGCAAG+AGG | 0.561508 | 3_2:+23351428 | Msa0399770:CDS |
| AGAACATCCACCGGGGCAGT+TGG | 0.563489 | 3_2:-23347717 | None:intergenic |
| TGGTATTTGGTTTACTACAA+AGG | 0.568402 | 3_2:+23348093 | Msa0399770:CDS |
| GATGCTACTAAACTTTAACT+AGG | 0.569840 | 3_2:-23351975 | None:intergenic |
| AGCATCAAATTGGGTTCCGA+AGG | 0.575611 | 3_2:+23347559 | Msa0399770:CDS |
| TGCGTTGAGGTGGTGGCCTG+CGG | 0.577755 | 3_2:-23351191 | None:intergenic |
| TAGTGCCCCAACCTCTGCAA+TGG | 0.580807 | 3_2:+23347997 | Msa0399770:CDS |
| TTTCGATATGCATGACATGT+TGG | 0.582133 | 3_2:+23351224 | Msa0399770:CDS |
| CCTCATCGTCATCGTCATCA+GGG | 0.582725 | 3_2:-23351479 | None:intergenic |
| TCGAATGGCTGCTATGCAAG+AGG | 0.583412 | 3_2:+23351518 | Msa0399770:CDS |
| AAGATGATGCTTGAGAAGCT+CGG | 0.587317 | 3_2:-23347484 | None:intergenic |
| AGAGGCCATGGCTCTTGGGA+TGG | 0.587677 | 3_2:+23351446 | Msa0399770:CDS |
| GGTCTTGTGCTTATGGTAGT+CGG | 0.588927 | 3_2:+23347444 | Msa0399770:CDS |
| TTGGGTTCCGAAGGTTACAA+AGG | 0.589756 | 3_2:+23347568 | Msa0399770:CDS |
| ACACCACGCTTGTCAGGTGA+AGG | 0.590498 | 3_2:-23347593 | None:intergenic |
| GGTGGATGTTCTCGTATTCA+CGG | 0.596225 | 3_2:+23347728 | Msa0399770:CDS |
| AGCATCCATCCCAAGAGCCA+TGG | 0.600499 | 3_2:-23351451 | None:intergenic |
| ATCATCTATCCCAGAAACCA+TGG | 0.600753 | 3_2:-23351541 | None:intergenic |
| TGAATACGAGAACATCCACC+GGG | 0.602886 | 3_2:-23347725 | None:intergenic |
| ACTTTAGCACTACGAGCCAC+AGG | 0.603612 | 3_2:-23347536 | None:intergenic |
| TTATCAGATTCGCTGGCTGG+CGG | 0.606192 | 3_2:+23351345 | Msa0399770:CDS |
| GCTGCTGCCAACTGCCCCGG+TGG | 0.606750 | 3_2:+23347710 | Msa0399770:CDS |
| TGAAGCCTGGCTCATACACA+TGG | 0.611090 | 3_2:+23351163 | Msa0399770:CDS |
| AAATGGAAATTGTCCATTTG+GGG | 0.614806 | 3_2:+23348291 | Msa0399770:CDS |
| GATGTCGGTGAATCCAGTAC+TGG | 0.616230 | 3_2:+23347650 | Msa0399770:CDS |
| ATAACTACAAGGCAAACTGC+AGG | 0.617185 | 3_2:+23348137 | Msa0399770:CDS |
| CATGACATGTTGGATGTGCT+CGG | 0.619477 | 3_2:+23351234 | Msa0399770:CDS |
| CATCAGGACTCTACCGATGT+CGG | 0.621122 | 3_2:+23347635 | Msa0399770:CDS |
| GTAGTAAACCAAATACCACT+TGG | 0.621876 | 3_2:-23348088 | None:intergenic |
| GGAAATTATTGATAACTACA+AGG | 0.622897 | 3_2:+23348126 | Msa0399770:CDS |
| GAATCAAAAGGACCCAAACA+AGG | 0.628395 | 3_2:-23351375 | None:intergenic |
| TAAGATTTACCTGTTGGACA+TGG | 0.635523 | 3_2:-23346442 | None:intergenic |
| GTGAATACGAGAACATCCAC+CGG | 0.635675 | 3_2:-23347726 | None:intergenic |
| AGTACTGGATTCACCGACAT+CGG | 0.635922 | 3_2:-23347648 | None:intergenic |
| GGTGAGGTTGATCTATCAAG+TGG | 0.638628 | 3_2:+23351255 | Msa0399770:CDS |
| ACTACCGATTTCCATTGCAG+AGG | 0.647818 | 3_2:-23348008 | None:intergenic |
| CATACACATGGAGACACCGC+AGG | 0.651112 | 3_2:+23351175 | Msa0399770:CDS |
| CAATTCCATGAAAATCATCA+GGG | 0.655793 | 3_2:-23351569 | None:intergenic |
| GTTCCTTCACCTGACAAGCG+TGG | 0.673427 | 3_2:+23347590 | Msa0399770:CDS |
| CCCTGATGACGATGACGATG+AGG | 0.676584 | 3_2:+23351479 | Msa0399770:CDS |
| CATGTTGGATGTGCTCGGTG+AGG | 0.698239 | 3_2:+23351239 | Msa0399770:CDS |
| AGAAGATGATGAAGAGTACG+AGG | 0.701267 | 3_2:+23351647 | Msa0399770:CDS |
| GAATACGAGAACATCCACCG+GGG | 0.861616 | 3_2:-23347724 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAATTTAATTAAA+AGG | + | chr3_2:23350925-23350944 | Msa0399770:intron | 0.0% |
| !! | TTATAAAAATTTAATTAAAA+GGG | + | chr3_2:23350926-23350945 | Msa0399770:intron | 0.0% |
| !!! | ATTTTTGAAATTCAATTTTT+AGG | + | chr3_2:23346808-23346827 | Msa0399770:intron | 10.0% |
| !!! | TTTTTGAAATTCAATTTTTA+GGG | + | chr3_2:23346809-23346828 | Msa0399770:intron | 10.0% |
| !! | AACAACATAAATAATCAAAT+GGG | - | chr3_2:23346580-23346599 | None:intergenic | 15.0% |
| !! | TAACAACATAAATAATCAAA+TGG | - | chr3_2:23346581-23346600 | None:intergenic | 15.0% |
| !!! | TTTAGGTTGATTTAATTTTA+GGG | + | chr3_2:23346760-23346779 | Msa0399770:intron | 15.0% |
| !! | TTAAATTTATGAATTGTTTC+AGG | + | chr3_2:23347063-23347082 | Msa0399770:intron | 15.0% |
| !! | TAAATTTATGAATTGTTTCA+GGG | + | chr3_2:23347064-23347083 | Msa0399770:intron | 15.0% |
| !!! | TCAAACATATTTTCAAAAAT+GGG | - | chr3_2:23349326-23349345 | None:intergenic | 15.0% |
| !!! | ATCAAACATATTTTCAAAAA+TGG | - | chr3_2:23349327-23349346 | None:intergenic | 15.0% |
| !!! | GTATTATTTTAATCTGAAAT+TGG | - | chr3_2:23350004-23350023 | None:intergenic | 15.0% |
| !! | ATTTCAGATTAAAATAATAC+TGG | + | chr3_2:23350004-23350023 | Msa0399770:intron | 15.0% |
| !!! | TTTTAGAAAAAAATTACCAA+GGG | - | chr3_2:23350900-23350919 | None:intergenic | 15.0% |
| !! | TCTCAAAAACTAATATAAAA+TGG | - | chr3_2:23351087-23351106 | None:intergenic | 15.0% |
| !!! | TTTTATATTAGTTTTTGAGA+TGG | + | chr3_2:23351087-23351106 | Msa0399770:intron | 15.0% |
| !!! | CTTTAGGTTGATTTAATTTT+AGG | + | chr3_2:23346759-23346778 | Msa0399770:intron | 20.0% |
| !!! | AGTAATTGAAGATTATTTCT+TGG | + | chr3_2:23346993-23347012 | Msa0399770:intron | 20.0% |
| !! | TGTATTTATATTGTTCTTAC+TGG | + | chr3_2:23347379-23347398 | Msa0399770:intron | 20.0% |
| !!! | TTACAAAACAAATTTTCATG+TGG | - | chr3_2:23347686-23347705 | None:intergenic | 20.0% |
| !! | ATCTGAAAGAGAAAAAAAAT+AGG | - | chr3_2:23348243-23348262 | None:intergenic | 20.0% |
| !! | AAATATAAAAGAAAGAGAGA+TGG | - | chr3_2:23348337-23348356 | None:intergenic | 20.0% |
| !!! | TCTTTCTTTTATATTTTCCT+TGG | + | chr3_2:23348341-23348360 | Msa0399770:intron | 20.0% |
| !! | TATTTCTTATTCTTAGAAGT+AGG | + | chr3_2:23348604-23348623 | Msa0399770:intron | 20.0% |
| !!! | CTTTAATTTAGAATATGGAT+TGG | + | chr3_2:23348648-23348667 | Msa0399770:intron | 20.0% |
| !!! | CAAGTTCTTTTACAAATTTT+AGG | - | chr3_2:23348820-23348839 | None:intergenic | 20.0% |
| !!! | AGTTTACATTTTTTTCTTAC+AGG | + | chr3_2:23348869-23348888 | Msa0399770:intron | 20.0% |
| !!! | GTTTACATTTTTTTCTTACA+GGG | + | chr3_2:23348870-23348889 | Msa0399770:intron | 20.0% |
| !!! | TTTACATTTTTTTCTTACAG+GGG | + | chr3_2:23348871-23348890 | Msa0399770:intron | 20.0% |
| !! | ATATAATACATATGTGTGTA+CGG | - | chr3_2:23348935-23348954 | None:intergenic | 20.0% |
| !! | TATTACTACTTGTCTTTAAT+TGG | + | chr3_2:23349055-23349074 | Msa0399770:intron | 20.0% |
| !! | AATCTCATCTAAAAAACTAA+AGG | + | chr3_2:23349728-23349747 | Msa0399770:intron | 20.0% |
| !!! | GATAATTTTGATTGTTTCTT+TGG | - | chr3_2:23349807-23349826 | None:intergenic | 20.0% |
| !! | ACAATCAAAATTATCTTCAA+AGG | + | chr3_2:23349812-23349831 | Msa0399770:intron | 20.0% |
| !! | TTACTAGCATAATACATTAT+TGG | + | chr3_2:23349950-23349969 | Msa0399770:intron | 20.0% |
| !!! | AGCACATATATTTTTTCAAA+GGG | + | chr3_2:23350294-23350313 | Msa0399770:intron | 20.0% |
| !!! | ATATTTCTAAACTATCTTGT+TGG | - | chr3_2:23350624-23350643 | None:intergenic | 20.0% |
| !!! | GTTTTAGAAAAAAATTACCA+AGG | - | chr3_2:23350901-23350920 | None:intergenic | 20.0% |
| !! | CCTAAAATACTAAGAAATAT+CGG | + | chr3_2:23350996-23351015 | Msa0399770:intron | 20.0% |
| !! | CTAAAATACTAAGAAATATC+GGG | + | chr3_2:23350997-23351016 | Msa0399770:intron | 20.0% |
| !! | GTAAATGTAAATATTGTCTT+TGG | + | chr3_2:23351049-23351068 | Msa0399770:intron | 20.0% |
| !! | TAATATAAAATGGATATGCA+AGG | - | chr3_2:23351077-23351096 | None:intergenic | 20.0% |
| !! | TGATGAATATTAGATTTACT+TGG | + | chr3_2:23351689-23351708 | Msa0399770:exon | 20.0% |
| !!! | CTTTTCTTATCAAAATCATT+TGG | + | chr3_2:23351776-23351795 | Msa0399770:three_prime_UTR | 20.0% |
| !!! | TGTTGTTGTTTTTGCAATTT+AGG | + | chr3_2:23346530-23346549 | Msa0399770:intron | 25.0% |
| !!! | TTGTTAATCTTGTTGTTTGA+TGG | + | chr3_2:23346595-23346614 | Msa0399770:intron | 25.0% |
| !!! | ATCAGTTCTTTTTTCTCTTT+AGG | + | chr3_2:23346743-23346762 | Msa0399770:intron | 25.0% |
| ! | ATACAAAGTAGAAAACACAT+TGG | - | chr3_2:23347364-23347383 | None:intergenic | 25.0% |
| ! | ATTTGCTCTTATTATCAGAA+AGG | + | chr3_2:23347422-23347441 | Msa0399770:CDS | 25.0% |
| ! | TTTGCTCTTATTATCAGAAA+GGG | + | chr3_2:23347423-23347442 | Msa0399770:CDS | 25.0% |
| ! | TGACAAAATATGATAGTTTG+CGG | - | chr3_2:23348066-23348085 | None:intergenic | 25.0% |
| !! | GGAAATTATTGATAACTACA+AGG | + | chr3_2:23348126-23348145 | Msa0399770:CDS | 25.0% |
| ! | AATTATTAAGCGTGAATGTT+TGG | + | chr3_2:23348198-23348217 | Msa0399770:intron | 25.0% |
| ! | AATTTATATGGCTATATGGA+TGG | - | chr3_2:23348479-23348498 | None:intergenic | 25.0% |
| ! | GGATAATTTATATGGCTATA+TGG | - | chr3_2:23348483-23348502 | None:intergenic | 25.0% |
| ! | ATTGGCATTTATTGAAAGAA+AGG | - | chr3_2:23348724-23348743 | None:intergenic | 25.0% |
| ! | CAAATTTCAACATTCTGTAT+TGG | - | chr3_2:23348742-23348761 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTCTCATGTAGT+AGG | + | chr3_2:23348988-23349007 | Msa0399770:intron | 25.0% |
| ! | GATCTATAGATCTAGTAAAA+TGG | - | chr3_2:23349130-23349149 | None:intergenic | 25.0% |
| ! | ATGCTGTGGAAATTAAATAT+GGG | - | chr3_2:23349158-23349177 | None:intergenic | 25.0% |
| !! | AGATTGAAGAAACTATTTCT+AGG | - | chr3_2:23349235-23349254 | None:intergenic | 25.0% |
| ! | AGAAATAGTTTCTTCAATCT+TGG | + | chr3_2:23349235-23349254 | Msa0399770:intron | 25.0% |
| ! | ACTAGTATTTAGTGGTTTAT+AGG | - | chr3_2:23349384-23349403 | None:intergenic | 25.0% |
| ! | ATTGATCAACTAGTATTTAG+TGG | - | chr3_2:23349392-23349411 | None:intergenic | 25.0% |
| ! | AAATACTAGTTGATCAATAG+AGG | + | chr3_2:23349394-23349413 | Msa0399770:intron | 25.0% |
| ! | AATACTAGTTGATCAATAGA+GGG | + | chr3_2:23349395-23349414 | Msa0399770:intron | 25.0% |
| ! | ATCACGAATATAAACCATAT+TGG | - | chr3_2:23349457-23349476 | None:intergenic | 25.0% |
| !! | TGATTTGGACATTGTAAATA+TGG | - | chr3_2:23349614-23349633 | None:intergenic | 25.0% |
| !! | TTGATTGTTTCTTTGGATTT+GGG | - | chr3_2:23349800-23349819 | None:intergenic | 25.0% |
| !! | TTTGATTGTTTCTTTGGATT+TGG | - | chr3_2:23349801-23349820 | None:intergenic | 25.0% |
| ! | TATTATGCTAGTAACCTATA+GGG | - | chr3_2:23349944-23349963 | None:intergenic | 25.0% |
| ! | ATACATTATTGGAATAATGC+TGG | + | chr3_2:23349961-23349980 | Msa0399770:intron | 25.0% |
| ! | ATTAAAATAATACTGGCAGT+GGG | + | chr3_2:23350011-23350030 | Msa0399770:intron | 25.0% |
| !!! | GAGCACATATATTTTTTCAA+AGG | + | chr3_2:23350293-23350312 | Msa0399770:intron | 25.0% |
| !! | TGTTTATTACGTAGTGTTTT+TGG | + | chr3_2:23350578-23350597 | Msa0399770:intron | 25.0% |
| !! | TACAAAGTTATGATTTTGTC+AGG | - | chr3_2:23350784-23350803 | None:intergenic | 25.0% |
| ! | TTAAAAGGGGAAAACAAATT+AGG | + | chr3_2:23350940-23350959 | Msa0399770:intron | 25.0% |
| !! | CCGATATTTCTTAGTATTTT+AGG | - | chr3_2:23350999-23351018 | None:intergenic | 25.0% |
| !! | AGAATTTTATTCCATCATGA+GGG | + | chr3_2:23351278-23351297 | Msa0399770:CDS | 25.0% |
| !!! | AGAGTTTAATGTTTTTCGAA+TGG | + | chr3_2:23351503-23351522 | Msa0399770:CDS | 25.0% |
| !!! | TGATTTTGATAAGAAAAGAG+AGG | - | chr3_2:23351774-23351793 | None:intergenic | 25.0% |
| !!! | ATCTTTTCATAGGGTATTAT+GGG | - | chr3_2:23351941-23351960 | None:intergenic | 25.0% |
| !!! | AATCTTTTCATAGGGTATTA+TGG | - | chr3_2:23351942-23351961 | None:intergenic | 25.0% |
| ! | ATAATACCCTATGAAAAGAT+TGG | + | chr3_2:23351941-23351960 | Msa0399770:three_prime_UTR | 25.0% |
| AGAAGAAGAAGAAAAGTTGA+AGG | - | chr3_2:23346376-23346395 | None:intergenic | 30.0% | |
| ATGTGAAAAACAAAAACGAG+AGG | - | chr3_2:23346404-23346423 | None:intergenic | 30.0% | |
| ! | TGCAATTTAGGTTTCAAAAG+AGG | + | chr3_2:23346542-23346561 | Msa0399770:intron | 30.0% |
| TCTGATGAGAAAAATCACAT+TGG | - | chr3_2:23347130-23347149 | None:intergenic | 30.0% | |
| ! | TGATTTTTCTCATCAGAGAA+AGG | + | chr3_2:23347133-23347152 | Msa0399770:CDS | 30.0% |
| TGCTAAAGTAGCATCAAATT+GGG | + | chr3_2:23347550-23347569 | Msa0399770:CDS | 30.0% | |
| TCCTACTGATAAAAAGGAAA+AGG | + | chr3_2:23347787-23347806 | Msa0399770:CDS | 30.0% | |
| ! | TCCTTTTCCTTTTTATCAGT+AGG | - | chr3_2:23347791-23347810 | None:intergenic | 30.0% |
| AGGAAAAGGAAAATCATTTG+AGG | + | chr3_2:23347801-23347820 | Msa0399770:CDS | 30.0% | |
| ! | TCATATTTTGTCATTCCAAG+TGG | + | chr3_2:23348073-23348092 | Msa0399770:CDS | 30.0% |
| ! | TGGTATTTGGTTTACTACAA+AGG | + | chr3_2:23348093-23348112 | Msa0399770:CDS | 30.0% |
| TACTACAAAGGAAGAAAAAC+AGG | + | chr3_2:23348105-23348124 | Msa0399770:CDS | 30.0% | |
| !!! | GATTGTAAACATTTTGACTC+TGG | + | chr3_2:23348268-23348287 | Msa0399770:CDS | 30.0% |
| !!! | AAACATTTTGACTCTGGAAA+TGG | + | chr3_2:23348274-23348293 | Msa0399770:CDS | 30.0% |
| GAAATGGAAATTGTCCATTT+GGG | + | chr3_2:23348290-23348309 | Msa0399770:CDS | 30.0% | |
| AAATGGAAATTGTCCATTTG+GGG | + | chr3_2:23348291-23348310 | Msa0399770:CDS | 30.0% | |
| AGAACTAATCCAACAAAGAA+AGG | - | chr3_2:23348450-23348469 | None:intergenic | 30.0% | |
| AACAACATCTACAAGGATTT+GGG | - | chr3_2:23348512-23348531 | None:intergenic | 30.0% | |
| ATAAGTCAACAACATCTACA+AGG | - | chr3_2:23348519-23348538 | None:intergenic | 30.0% | |
| ! | TAGGTTTCTTTCCCTTTTAT+GGG | + | chr3_2:23348623-23348642 | Msa0399770:intron | 30.0% |
| AAATTAAAGCCCCCATAAAA+GGG | - | chr3_2:23348637-23348656 | None:intergenic | 30.0% | |
| TAAATTAAAGCCCCCATAAA+AGG | - | chr3_2:23348638-23348657 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCTTACAGGGGAT+GGG | + | chr3_2:23348876-23348895 | Msa0399770:intron | 30.0% |
| TGCTGTGGAAATTAAATATG+GGG | - | chr3_2:23349157-23349176 | None:intergenic | 30.0% | |
| GATGCTGTGGAAATTAAATA+TGG | - | chr3_2:23349159-23349178 | None:intergenic | 30.0% | |
| TTCAAAAGCTCAAACAGATT+GGG | - | chr3_2:23349210-23349229 | None:intergenic | 30.0% | |
| ATTCAAAAGCTCAAACAGAT+TGG | - | chr3_2:23349211-23349230 | None:intergenic | 30.0% | |
| ATAGTTTCTTCAATCTTGGT+TGG | + | chr3_2:23349239-23349258 | Msa0399770:intron | 30.0% | |
| TAGTGGTTTATAGGAGTAAT+GGG | - | chr3_2:23349375-23349394 | None:intergenic | 30.0% | |
| TTAGTGGTTTATAGGAGTAA+TGG | - | chr3_2:23349376-23349395 | None:intergenic | 30.0% | |
| TAGAGGGAAAATGAGTTTAA+AGG | + | chr3_2:23349411-23349430 | Msa0399770:intron | 30.0% | |
| TTACTACACATTGGAATACA+TGG | - | chr3_2:23349547-23349566 | None:intergenic | 30.0% | |
| TATTCCAATGTGTAGTAACT+AGG | + | chr3_2:23349549-23349568 | Msa0399770:intron | 30.0% | |
| ! | CTTAATCCTAATCACTGATT+TGG | - | chr3_2:23349629-23349648 | None:intergenic | 30.0% |
| CAAATCAGTGATTAGGATTA+AGG | + | chr3_2:23349627-23349646 | Msa0399770:intron | 30.0% | |
| ATGATAGAATGTTGTGTAAG+TGG | - | chr3_2:23349706-23349725 | None:intergenic | 30.0% | |
| ! | AGTCAGCCATAAAATTTTGT+AGG | + | chr3_2:23349882-23349901 | Msa0399770:intron | 30.0% |
| !! | ACAAATTTTGGGTGACTATA+GGG | - | chr3_2:23349913-23349932 | None:intergenic | 30.0% |
| !! | TACAAATTTTGGGTGACTAT+AGG | - | chr3_2:23349914-23349933 | None:intergenic | 30.0% |
| TATAGTCACCCAAAATTTGT+AGG | + | chr3_2:23349913-23349932 | Msa0399770:intron | 30.0% | |
| GTATTATGCTAGTAACCTAT+AGG | - | chr3_2:23349945-23349964 | None:intergenic | 30.0% | |
| GATTAAAATAATACTGGCAG+TGG | + | chr3_2:23350010-23350029 | Msa0399770:intron | 30.0% | |
| ATTACCGTTTAGTATTGTAG+TGG | + | chr3_2:23350065-23350084 | Msa0399770:intron | 30.0% | |
| CTAACCACTACAATACTAAA+CGG | - | chr3_2:23350072-23350091 | None:intergenic | 30.0% | |
| TTAGGTTATGGTAGTTTCTA+GGG | + | chr3_2:23350088-23350107 | Msa0399770:intron | 30.0% | |
| !!! | AAGGAGTTTTAAGAAGTTCA+AGG | - | chr3_2:23350120-23350139 | None:intergenic | 30.0% |
| !! | GCAATTTGTTAATCTGAATG+TGG | - | chr3_2:23350231-23350250 | None:intergenic | 30.0% |
| !!! | ATTTTTTCAAAGGGTGAGTA+TGG | + | chr3_2:23350303-23350322 | Msa0399770:intron | 30.0% |
| TGGAAACAAGTACTATCATA+TGG | + | chr3_2:23350323-23350342 | Msa0399770:intron | 30.0% | |
| AACAGAAAAAAGACCAAAGA+GGG | + | chr3_2:23350393-23350412 | Msa0399770:intron | 30.0% | |
| CACTACGTAATAAACACAAT+AGG | - | chr3_2:23350574-23350593 | None:intergenic | 30.0% | |
| ! | AAAGTTATGATTTTGTCAGG+TGG | - | chr3_2:23350781-23350800 | None:intergenic | 30.0% |
| ! | ACTTTTGAACATAGACACTA+AGG | - | chr3_2:23350966-23350985 | None:intergenic | 30.0% |
| ! | GAGAATTTTATTCCATCATG+AGG | + | chr3_2:23351277-23351296 | Msa0399770:CDS | 30.0% |
| CAATTCCATGAAAATCATCA+GGG | - | chr3_2:23351572-23351591 | None:intergenic | 30.0% | |
| TCAATTCCATGAAAATCATC+AGG | - | chr3_2:23351573-23351592 | None:intergenic | 30.0% | |
| ! | TTTTCATGGAATTGATCCTA+TGG | + | chr3_2:23351578-23351597 | Msa0399770:CDS | 30.0% |
| ! | AATGATGATGCATTCTCATA+TGG | + | chr3_2:23351617-23351636 | Msa0399770:CDS | 30.0% |
| ! | GTTTAAAACTAGAGCATCAT+AGG | - | chr3_2:23351717-23351736 | None:intergenic | 30.0% |
| TCTTATCAAAATCATTTGGC+AGG | + | chr3_2:23351780-23351799 | Msa0399770:three_prime_UTR | 30.0% | |
| !!! | AGATCATATGCCATTTTTGA+AGG | + | chr3_2:23351832-23351851 | Msa0399770:three_prime_UTR | 30.0% |
| TAAGCCAAAACTCCTTAAAA+TGG | - | chr3_2:23351866-23351885 | None:intergenic | 30.0% | |
| !!! | TTTTAAGGAGTTTTGGCTTA+AGG | + | chr3_2:23351866-23351885 | Msa0399770:three_prime_UTR | 30.0% |
| !!! | TTTAAGGAGTTTTGGCTTAA+GGG | + | chr3_2:23351867-23351886 | Msa0399770:three_prime_UTR | 30.0% |
| ! | AACCAACCAATCTTTTCATA+GGG | - | chr3_2:23351950-23351969 | None:intergenic | 30.0% |
| ! | AAACCAACCAATCTTTTCAT+AGG | - | chr3_2:23351951-23351970 | None:intergenic | 30.0% |
| GATGCTACTAAACTTTAACT+AGG | - | chr3_2:23351978-23351997 | None:intergenic | 30.0% | |
| !! | ACATGGTGAGATTTTAGGAA+CGG | - | chr3_2:23346428-23346447 | None:intergenic | 35.0% |
| TAAGATTTACCTGTTGGACA+TGG | - | chr3_2:23346445-23346464 | None:intergenic | 35.0% | |
| AGGTGTTAAGATTTACCTGT+TGG | - | chr3_2:23346451-23346470 | None:intergenic | 35.0% | |
| GAGAAACGATCGAAGAAAAA+AGG | - | chr3_2:23346471-23346490 | None:intergenic | 35.0% | |
| CATTGGTCAGTAACAGTAAA+TGG | - | chr3_2:23347192-23347211 | None:intergenic | 35.0% | |
| TATCACTGATGTTGATGTGT+CGG | + | chr3_2:23347298-23347317 | Msa0399770:intron | 35.0% | |
| CAAAGTAGAAAACACATTGG+CGG | - | chr3_2:23347361-23347380 | None:intergenic | 35.0% | |
| GTGCTAAAGTAGCATCAAAT+TGG | + | chr3_2:23347549-23347568 | Msa0399770:CDS | 35.0% | |
| TTTGAGGACTTGTGACAAAA+AGG | + | chr3_2:23347817-23347836 | Msa0399770:CDS | 35.0% | |
| !! | CAAAAAGGAAAAGTACCTTC+TGG | + | chr3_2:23347832-23347851 | Msa0399770:CDS | 35.0% |
| AACTTACATTCTGATGGCTT+GGG | - | chr3_2:23347917-23347936 | None:intergenic | 35.0% | |
| AAACTTACATTCTGATGGCT+TGG | - | chr3_2:23347918-23347937 | None:intergenic | 35.0% | |
| AAGCCATCAGAATGTAAGTT+TGG | + | chr3_2:23347917-23347936 | Msa0399770:CDS | 35.0% | |
| AGCCATCAGAATGTAAGTTT+GGG | + | chr3_2:23347918-23347937 | Msa0399770:CDS | 35.0% | |
| AACCCAAACTTACATTCTGA+TGG | - | chr3_2:23347923-23347942 | None:intergenic | 35.0% | |
| GTTTGTCATGTATTCGCAAT+TGG | + | chr3_2:23347969-23347988 | Msa0399770:CDS | 35.0% | |
| TTGTCATTCCAAGTGGTATT+TGG | + | chr3_2:23348080-23348099 | Msa0399770:CDS | 35.0% | |
| GTAGTAAACCAAATACCACT+TGG | - | chr3_2:23348091-23348110 | None:intergenic | 35.0% | |
| ATTCTTGCAAGCATACACAA+CGG | - | chr3_2:23348181-23348200 | None:intergenic | 35.0% | |
| GGAAATGGAAATTGTCCATT+TGG | + | chr3_2:23348289-23348308 | Msa0399770:CDS | 35.0% | |
| ATGATAATCAAGCTTGACCA+AGG | - | chr3_2:23348361-23348380 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAAAGCA+TGG | - | chr3_2:23348440-23348459 | None:intergenic | 35.0% | |
| ! | CATGCTTTTCCTTTCTTTGT+TGG | + | chr3_2:23348438-23348457 | Msa0399770:intron | 35.0% |
| GGGAGAACGGATAATTTATA+TGG | - | chr3_2:23348491-23348510 | None:intergenic | 35.0% | |
| ACAACATCTACAAGGATTTG+GGG | - | chr3_2:23348511-23348530 | None:intergenic | 35.0% | |
| CAACAACATCTACAAGGATT+TGG | - | chr3_2:23348513-23348532 | None:intergenic | 35.0% | |
| GATTATTTAATCCAGATGCG+TGG | - | chr3_2:23348551-23348570 | None:intergenic | 35.0% | |
| ! | GTAGGTTTCTTTCCCTTTTA+TGG | + | chr3_2:23348622-23348641 | Msa0399770:intron | 35.0% |
| ! | AGGTTTCTTTCCCTTTTATG+GGG | + | chr3_2:23348624-23348643 | Msa0399770:intron | 35.0% |
| ! | GGGGGCTTTAATTTAGAATA+TGG | + | chr3_2:23348643-23348662 | Msa0399770:intron | 35.0% |
| GTGAATATCTTTCACCTCAT+AGG | + | chr3_2:23348764-23348783 | Msa0399770:intron | 35.0% | |
| !!! | CATTTTTTTCTTACAGGGGA+TGG | + | chr3_2:23348875-23348894 | Msa0399770:intron | 35.0% |
| ! | GTGAATGATTGTTGTTCAGT+TGG | - | chr3_2:23348913-23348932 | None:intergenic | 35.0% |
| TGAAACTACTTGGAAGATCT+TGG | - | chr3_2:23349092-23349111 | None:intergenic | 35.0% | |
| GTAAAATGGTGAATGTGACA+AGG | - | chr3_2:23349116-23349135 | None:intergenic | 35.0% | |
| AGATGAAATAAGAGATGCTG+TGG | - | chr3_2:23349172-23349191 | None:intergenic | 35.0% | |
| TTGCGTTAACACAACCAATA+TGG | + | chr3_2:23349440-23349459 | Msa0399770:intron | 35.0% | |
| GAAAGTAGGGAATGTAATTG+AGG | - | chr3_2:23349518-23349537 | None:intergenic | 35.0% | |
| TACATGGAGCATAGAAAGTA+GGG | - | chr3_2:23349531-23349550 | None:intergenic | 35.0% | |
| ATACATGGAGCATAGAAAGT+AGG | - | chr3_2:23349532-23349551 | None:intergenic | 35.0% | |
| TTCTCCTAGTTACTACACAT+TGG | - | chr3_2:23349556-23349575 | None:intergenic | 35.0% | |
| CAATGTCCAAATCAGTGATT+AGG | + | chr3_2:23349620-23349639 | Msa0399770:intron | 35.0% | |
| GAATGTTGTGTAAGTGGTAA+AGG | - | chr3_2:23349700-23349719 | None:intergenic | 35.0% | |
| ! | TTAAGCTTTTACCCACCATA+TGG | + | chr3_2:23349836-23349855 | Msa0399770:intron | 35.0% |
| ! | TAAGCTTTTACCCACCATAT+GGG | + | chr3_2:23349837-23349856 | Msa0399770:intron | 35.0% |
| !! | GTCTACTAGACTTGTTAATG+AGG | + | chr3_2:23349859-23349878 | Msa0399770:intron | 35.0% |
| ! | GCCATAAAATTTTGTAGGCA+TGG | + | chr3_2:23349887-23349906 | Msa0399770:intron | 35.0% |
| ! | GCCATGCCTACAAAATTTTA+TGG | - | chr3_2:23349891-23349910 | None:intergenic | 35.0% |
| TCACCCAAAATTTGTAGGTA+TGG | + | chr3_2:23349918-23349937 | Msa0399770:intron | 35.0% | |
| CGTTTAGTATTGTAGTGGTT+AGG | + | chr3_2:23350070-23350089 | Msa0399770:intron | 35.0% | |
| GTATTGTAGTGGTTAGGTTA+TGG | + | chr3_2:23350076-23350095 | Msa0399770:intron | 35.0% | |
| GTTAGGTTATGGTAGTTTCT+AGG | + | chr3_2:23350087-23350106 | Msa0399770:intron | 35.0% | |
| !!! | GACACTCTTGTTTTTCCATT+TGG | + | chr3_2:23350182-23350201 | Msa0399770:intron | 35.0% |
| GATGTATTCGTTTGACCAAA+TGG | - | chr3_2:23350200-23350219 | None:intergenic | 35.0% | |
| TGAAGTGAAGACAATAGGAA+GGG | - | chr3_2:23350366-23350385 | None:intergenic | 35.0% | |
| ATGAAGTGAAGACAATAGGA+AGG | - | chr3_2:23350367-23350386 | None:intergenic | 35.0% | |
| TGTCATGAAGTGAAGACAAT+AGG | - | chr3_2:23350371-23350390 | None:intergenic | 35.0% | |
| GAACAGAAAAAAGACCAAAG+AGG | + | chr3_2:23350392-23350411 | Msa0399770:intron | 35.0% | |
| ACAGAAAAAAGACCAAAGAG+GGG | + | chr3_2:23350394-23350413 | Msa0399770:intron | 35.0% | |
| ! | TTTTGTGATCCATGAGTTGT+TGG | + | chr3_2:23350438-23350457 | Msa0399770:intron | 35.0% |
| !!! | TACGTAGTGTTTTTGGTGAT+AGG | + | chr3_2:23350585-23350604 | Msa0399770:intron | 35.0% |
| !!! | ACGTAGTGTTTTTGGTGATA+GGG | + | chr3_2:23350586-23350605 | Msa0399770:intron | 35.0% |
| ACATGTCATGCATATCGAAA+TGG | - | chr3_2:23351224-23351243 | None:intergenic | 35.0% | |
| TTTCGATATGCATGACATGT+TGG | + | chr3_2:23351224-23351243 | Msa0399770:CDS | 35.0% | |
| !!! | AGGGACTCAGATTTTTTTGA+GGG | + | chr3_2:23351297-23351316 | Msa0399770:CDS | 35.0% |
| !!! | CTCAGATTTTTTTGAGGGAA+TGG | + | chr3_2:23351302-23351321 | Msa0399770:CDS | 35.0% |
| ! | AATGGATCCATTTGAGATGA+TGG | + | chr3_2:23351320-23351339 | Msa0399770:CDS | 35.0% |
| GATAATGCCATCATCTCAAA+TGG | - | chr3_2:23351330-23351349 | None:intergenic | 35.0% | |
| !!! | GTTTCTGGGATAGATGATTT+TGG | + | chr3_2:23351546-23351565 | Msa0399770:CDS | 35.0% |
| AGGTGACACAACTTAGTTAA+AGG | - | chr3_2:23351754-23351773 | None:intergenic | 35.0% | |
| !!! | AAGGTCATGTTGCCATTTTA+AGG | + | chr3_2:23351851-23351870 | Msa0399770:three_prime_UTR | 35.0% |
| !!! | GTTGCCATTTTAAGGAGTTT+TGG | + | chr3_2:23351859-23351878 | Msa0399770:three_prime_UTR | 35.0% |
| !!! | TTGGCTTAAGGGTTTTGTTT+TGG | + | chr3_2:23351878-23351897 | Msa0399770:three_prime_UTR | 35.0% |
| !!! | GGGTTTTGTTTTGGATTTTG+TGG | + | chr3_2:23351887-23351906 | Msa0399770:three_prime_UTR | 35.0% |
| TACCCTATGAAAAGATTGGT+TGG | + | chr3_2:23351945-23351964 | Msa0399770:three_prime_UTR | 35.0% | |
| ! | GTTGGACATGGTGAGATTTT+AGG | - | chr3_2:23346433-23346452 | None:intergenic | 40.0% |
| AAAATCTCACCATGTCCAAC+AGG | + | chr3_2:23346433-23346452 | Msa0399770:exon | 40.0% | |
| GACCAATGTACTTTGTAGCA+CGG | + | chr3_2:23347204-23347223 | Msa0399770:intron | 40.0% | |
| ATCCGTGCTACAAAGTACAT+TGG | - | chr3_2:23347209-23347228 | None:intergenic | 40.0% | |
| AAGATGATGCTTGAGAAGCT+CGG | - | chr3_2:23347487-23347506 | None:intergenic | 40.0% | |
| AGCATCATCTTCAGCATCTA+TGG | + | chr3_2:23347496-23347515 | Msa0399770:CDS | 40.0% | |
| GAAGGAACCTTTGTAACCTT+CGG | - | chr3_2:23347578-23347597 | None:intergenic | 40.0% | |
| ! | CCTTTTTATCAGTAGGATGC+AGG | - | chr3_2:23347784-23347803 | None:intergenic | 40.0% |
| CCTGCATCCTACTGATAAAA+AGG | + | chr3_2:23347781-23347800 | Msa0399770:CDS | 40.0% | |
| ! | ATGATAGTTTGCGGCAAACA+GGG | - | chr3_2:23348057-23348076 | None:intergenic | 40.0% |
| ! | TATGATAGTTTGCGGCAAAC+AGG | - | chr3_2:23348058-23348077 | None:intergenic | 40.0% |
| ATAACTACAAGGCAAACTGC+AGG | + | chr3_2:23348137-23348156 | Msa0399770:CDS | 40.0% | |
| ! | GGTTTCTTTCCCTTTTATGG+GGG | + | chr3_2:23348625-23348644 | Msa0399770:intron | 40.0% |
| CTCTACATCATCTTCCTATG+AGG | - | chr3_2:23348781-23348800 | None:intergenic | 40.0% | |
| CTCATAGGAAGATGATGTAG+AGG | + | chr3_2:23348779-23348798 | Msa0399770:intron | 40.0% | |
| ! | GTAGTAGGCAAGTGGTATTT+TGG | + | chr3_2:23349003-23349022 | Msa0399770:intron | 40.0% |
| !! | GCAAGTGGTATTTTGGACTT+TGG | + | chr3_2:23349010-23349029 | Msa0399770:intron | 40.0% |
| GTGACAAGGATGAAACTACT+TGG | - | chr3_2:23349102-23349121 | None:intergenic | 40.0% | |
| ! | TGGTTTATAGGAGTAATGGG+CGG | - | chr3_2:23349372-23349391 | None:intergenic | 40.0% |
| CAATGCGTCATAACTCAAAG+AGG | - | chr3_2:23349757-23349776 | None:intergenic | 40.0% | |
| TGAGTTATGACGCATTGCAT+TGG | + | chr3_2:23349760-23349779 | Msa0399770:intron | 40.0% | |
| ACAAGTCTAGTAGACCCATA+TGG | - | chr3_2:23349854-23349873 | None:intergenic | 40.0% | |
| ! | GGGCCATACCTACAAATTTT+GGG | - | chr3_2:23349924-23349943 | None:intergenic | 40.0% |
| ! | AGGGCCATACCTACAAATTT+TGG | - | chr3_2:23349925-23349944 | None:intergenic | 40.0% |
| ATTTGTAGGTATGGCCCTAT+AGG | + | chr3_2:23349927-23349946 | Msa0399770:intron | 40.0% | |
| ACCAACTGAGCTACTTACTT+GGG | + | chr3_2:23350156-23350175 | Msa0399770:intron | 40.0% | |
| ! | ACACTTGTAGCTTTACACGT+TGG | - | chr3_2:23350260-23350279 | None:intergenic | 40.0% |
| AATAGGAAGGGTCTGGATAT+AGG | - | chr3_2:23350354-23350373 | None:intergenic | 40.0% | |
| !! | TAACACTGATTTCCCCTCTT+TGG | - | chr3_2:23350409-23350428 | None:intergenic | 40.0% |
| TTGGCTGAAAGTGATACTAG+AGG | + | chr3_2:23350461-23350480 | Msa0399770:intron | 40.0% | |
| ACTCATTCTCAGATCACTCA+TGG | - | chr3_2:23350506-23350525 | None:intergenic | 40.0% | |
| AAGCATCAACAACAGTGTAG+GGG | - | chr3_2:23350674-23350693 | None:intergenic | 40.0% | |
| CAAGCATCAACAACAGTGTA+GGG | - | chr3_2:23350675-23350694 | None:intergenic | 40.0% | |
| ACAAGCATCAACAACAGTGT+AGG | - | chr3_2:23350676-23350695 | None:intergenic | 40.0% | |
| ! | GTTATGATTTTGTCAGGTGG+AGG | - | chr3_2:23350778-23350797 | None:intergenic | 40.0% |
| !! | GTTTCGGGTGGACTAAATAA+TGG | - | chr3_2:23350838-23350857 | None:intergenic | 40.0% |
| TGTTTAACTGCCCTGTGTTT+CGG | - | chr3_2:23350854-23350873 | None:intergenic | 40.0% | |
| !! | AACACCTCATGGACTAGATA+AGG | + | chr3_2:23350870-23350889 | Msa0399770:intron | 40.0% |
| !!! | AAATGGTTTTGTCTGCGTTG+AGG | - | chr3_2:23351207-23351226 | None:intergenic | 40.0% |
| AAAATCTGAGTCCCTCATGA+TGG | - | chr3_2:23351292-23351311 | None:intergenic | 40.0% | |
| !!! | GAGGGACTCAGATTTTTTTG+AGG | + | chr3_2:23351296-23351315 | Msa0399770:CDS | 40.0% |
| GAATCAAAAGGACCCAAACA+AGG | - | chr3_2:23351378-23351397 | None:intergenic | 40.0% | |
| !! | TCCTTTTGATTCAGACGATG+AGG | + | chr3_2:23351386-23351405 | Msa0399770:CDS | 40.0% |
| TCCTCATCGTCTGAATCAAA+AGG | - | chr3_2:23351390-23351409 | None:intergenic | 40.0% | |
| ATTCAGACGATGAGGATGAT+GGG | + | chr3_2:23351394-23351413 | Msa0399770:CDS | 40.0% | |
| TCAAATTGCTGCTATGCAAG+AGG | + | chr3_2:23351428-23351447 | Msa0399770:CDS | 40.0% | |
| ATCATCTATCCCAGAAACCA+TGG | - | chr3_2:23351544-23351563 | None:intergenic | 40.0% | |
| ! | TTTGGCCCTGATGATTTTCA+TGG | + | chr3_2:23351564-23351583 | Msa0399770:CDS | 40.0% |
| GATATCAAAGCTGCATCCAT+AGG | - | chr3_2:23351597-23351616 | None:intergenic | 40.0% | |
| ! | AGAAGATGATGAAGAGTACG+AGG | + | chr3_2:23351647-23351666 | Msa0399770:CDS | 40.0% |
| GGCAACATGACCTTCAAAAA+TGG | - | chr3_2:23351845-23351864 | None:intergenic | 40.0% | |
| !! | GTTTGCAAGTTTTATGCGCG+AGG | + | chr3_2:23347086-23347105 | Msa0399770:CDS | 45.0% |
| GAGTCAATGTCGTGTTGTGT+CGG | - | chr3_2:23347243-23347262 | None:intergenic | 45.0% | |
| GTGAAACACTGACACCAGAT+AGG | - | chr3_2:23347339-23347358 | None:intergenic | 45.0% | |
| ! | CAGAAAGGGTCTTGTGCTTA+TGG | + | chr3_2:23347437-23347456 | Msa0399770:CDS | 45.0% |
| ! | GGTCTTGTGCTTATGGTAGT+CGG | + | chr3_2:23347444-23347463 | Msa0399770:CDS | 45.0% |
| AGCATCAAATTGGGTTCCGA+AGG | + | chr3_2:23347559-23347578 | Msa0399770:CDS | 45.0% | |
| TTGGGTTCCGAAGGTTACAA+AGG | + | chr3_2:23347568-23347587 | Msa0399770:CDS | 45.0% | |
| ! | AGTACTGGATTCACCGACAT+CGG | - | chr3_2:23347651-23347670 | None:intergenic | 45.0% |
| TGAATACGAGAACATCCACC+GGG | - | chr3_2:23347728-23347747 | None:intergenic | 45.0% | |
| GTGAATACGAGAACATCCAC+CGG | - | chr3_2:23347729-23347748 | None:intergenic | 45.0% | |
| GGTGGATGTTCTCGTATTCA+CGG | + | chr3_2:23347728-23347747 | Msa0399770:CDS | 45.0% | |
| !!! | CGCTGTTTTTCAAAGCCAGA+AGG | - | chr3_2:23347850-23347869 | None:intergenic | 45.0% |
| ! | CAGAAAGCGTGATCACATTC+TGG | - | chr3_2:23347950-23347969 | None:intergenic | 45.0% |
| GATTTCCATTGCAGAGGTTG+GGG | - | chr3_2:23348005-23348024 | None:intergenic | 45.0% | |
| CGATTTCCATTGCAGAGGTT+GGG | - | chr3_2:23348006-23348025 | None:intergenic | 45.0% | |
| CCAACCTCTGCAATGGAAAT+CGG | + | chr3_2:23348004-23348023 | Msa0399770:CDS | 45.0% | |
| !! | ACTACCGATTTCCATTGCAG+AGG | - | chr3_2:23348011-23348030 | None:intergenic | 45.0% |
| TAGAAACAGCTAGCCCCAAA+TGG | - | chr3_2:23348307-23348326 | None:intergenic | 45.0% | |
| CTACAAGGATTTGGGGAGAA+CGG | - | chr3_2:23348504-23348523 | None:intergenic | 45.0% | |
| GGACAAGTTGCTAAAGCTTG+TGG | - | chr3_2:23348703-23348722 | None:intergenic | 45.0% | |
| TGTCTCATGTAGTAGGCAAG+TGG | + | chr3_2:23348995-23349014 | Msa0399770:intron | 45.0% | |
| TTGGAAGATCTTGGAGACGA+TGG | - | chr3_2:23349083-23349102 | None:intergenic | 45.0% | |
| TGCAACATACACTAGCCAGT+AGG | - | chr3_2:23349267-23349286 | None:intergenic | 45.0% | |
| !! | TTATAGGAGTAATGGGCGGA+GGG | - | chr3_2:23349368-23349387 | None:intergenic | 45.0% |
| !! | TTTATAGGAGTAATGGGCGG+AGG | - | chr3_2:23349369-23349388 | None:intergenic | 45.0% |
| AGGACAATGCTAGCAACTAG+CGG | - | chr3_2:23349680-23349699 | None:intergenic | 45.0% | |
| GTCTAGTAGACCCATATGGT+GGG | - | chr3_2:23349850-23349869 | None:intergenic | 45.0% | |
| AGTCTAGTAGACCCATATGG+TGG | - | chr3_2:23349851-23349870 | None:intergenic | 45.0% | |
| TTGGAATAATGCTGGACTGC+TGG | + | chr3_2:23349969-23349988 | Msa0399770:intron | 45.0% | |
| !! | TAGCTCAGTTGGTGAGCTAA+GGG | - | chr3_2:23350149-23350168 | None:intergenic | 45.0% |
| CACCAACTGAGCTACTTACT+TGG | + | chr3_2:23350155-23350174 | Msa0399770:intron | 45.0% | |
| TCCCAAGTAAGTAGCTCAGT+TGG | - | chr3_2:23350160-23350179 | None:intergenic | 45.0% | |
| TGAAGACAATAGGAAGGGTC+TGG | - | chr3_2:23350361-23350380 | None:intergenic | 45.0% | |
| GTGATCCATGAGTTGTTGGT+TGG | + | chr3_2:23350442-23350461 | Msa0399770:intron | 45.0% | |
| TTCAGCCAACCAACAACTCA+TGG | - | chr3_2:23350450-23350469 | None:intergenic | 45.0% | |
| GATACTAGAGGCTAGAGCTA+TGG | + | chr3_2:23350473-23350492 | Msa0399770:intron | 45.0% | |
| !!! | AGTGTTTTTGGTGATAGGGC+AGG | + | chr3_2:23350590-23350609 | Msa0399770:intron | 45.0% |
| ATCAACAACAGTGTAGGGGA+GGG | - | chr3_2:23350670-23350689 | None:intergenic | 45.0% | |
| !! | TGGAAGGTGTCTGGAAACAA+GGG | - | chr3_2:23350746-23350765 | None:intergenic | 45.0% |
| !! | ATGGAAGGTGTCTGGAAACA+AGG | - | chr3_2:23350747-23350766 | None:intergenic | 45.0% |
| ! | ATGATTTTGTCAGGTGGAGG+TGG | - | chr3_2:23350775-23350794 | None:intergenic | 45.0% |
| ATTTAGTCCACCCGAAACAC+AGG | + | chr3_2:23350840-23350859 | Msa0399770:intron | 45.0% | |
| TTTAGTCCACCCGAAACACA+GGG | + | chr3_2:23350841-23350860 | Msa0399770:intron | 45.0% | |
| GTTTAACTGCCCTGTGTTTC+GGG | - | chr3_2:23350853-23350872 | None:intergenic | 45.0% | |
| TGCTCCTTATCTAGTCCATG+AGG | - | chr3_2:23350877-23350896 | None:intergenic | 45.0% | |
| TTTCAGCATACAGTGAAGCC+TGG | + | chr3_2:23351150-23351169 | Msa0399770:intron | 45.0% | |
| CATGACATGTTGGATGTGCT+CGG | + | chr3_2:23351234-23351253 | Msa0399770:CDS | 45.0% | |
| ! | GGTGAGGTTGATCTATCAAG+TGG | + | chr3_2:23351255-23351274 | Msa0399770:CDS | 45.0% |
| GATGGCATTATCAGATTCGC+TGG | + | chr3_2:23351338-23351357 | Msa0399770:CDS | 45.0% | |
| GATTCAGACGATGAGGATGA+TGG | + | chr3_2:23351393-23351412 | Msa0399770:CDS | 45.0% | |
| !! | TATAAAAATTTAATTAAAAG+GGG | + | chr3_2:23350927-23350946 | Msa0399770:intron | 5.0% |
| ! | CGTGTTGTGTCGGTGATTAG+AGG | - | chr3_2:23347233-23347252 | None:intergenic | 50.0% |
| GTCGTTGTCAGTGTCCTATC+TGG | + | chr3_2:23347322-23347341 | Msa0399770:intron | 50.0% | |
| ACTTTAGCACTACGAGCCAC+AGG | - | chr3_2:23347539-23347558 | None:intergenic | 50.0% | |
| ACCTGACAAGCGTGGTGTAA+AGG | + | chr3_2:23347598-23347617 | Msa0399770:CDS | 50.0% | |
| CCTGACAAGCGTGGTGTAAA+GGG | + | chr3_2:23347599-23347618 | Msa0399770:CDS | 50.0% | |
| GGGTTTACAACGCAAGCATC+AGG | + | chr3_2:23347619-23347638 | Msa0399770:CDS | 50.0% | |
| CATCAGGACTCTACCGATGT+CGG | + | chr3_2:23347635-23347654 | Msa0399770:CDS | 50.0% | |
| GATGTCGGTGAATCCAGTAC+TGG | + | chr3_2:23347650-23347669 | Msa0399770:CDS | 50.0% | |
| TGGTCTAGCACTACCAGTAC+TGG | - | chr3_2:23347666-23347685 | None:intergenic | 50.0% | |
| GAATACGAGAACATCCACCG+GGG | - | chr3_2:23347727-23347746 | None:intergenic | 50.0% | |
| ! | CTGATGGCTTGGGTTTCGAA+AGG | - | chr3_2:23347907-23347926 | None:intergenic | 50.0% |
| CCGATTTCCATTGCAGAGGT+TGG | - | chr3_2:23348007-23348026 | None:intergenic | 50.0% | |
| AGGGCAGGTTCTCACTGTAT+TGG | - | chr3_2:23348038-23348057 | None:intergenic | 50.0% | |
| !! | TGGGGCTAGCTGTTTCTACA+AGG | + | chr3_2:23348309-23348328 | Msa0399770:CDS | 50.0% |
| ! | CAATCTTGGTTGGTGCCTAC+TGG | + | chr3_2:23349249-23349268 | Msa0399770:intron | 50.0% |
| !! | TATAGGAGTAATGGGCGGAG+GGG | - | chr3_2:23349367-23349386 | None:intergenic | 50.0% |
| CAACTAGCGGCTCTGTATCA+GGG | - | chr3_2:23349667-23349686 | None:intergenic | 50.0% | |
| ! | ATGACGCATTGCATTGGCGA+TGG | + | chr3_2:23349766-23349785 | Msa0399770:intron | 50.0% |
| TAATGCTGGACTGCTGGTAG+TGG | + | chr3_2:23349975-23349994 | Msa0399770:intron | 50.0% | |
| ATACTGGCAGTGGGTAAGAG+TGG | + | chr3_2:23350020-23350039 | Msa0399770:intron | 50.0% | |
| CAGTGGGTAAGAGTGGAAGT+AGG | + | chr3_2:23350027-23350046 | Msa0399770:intron | 50.0% | |
| GGTGAGCTAAGGGACATCAA+AGG | - | chr3_2:23350139-23350158 | None:intergenic | 50.0% | |
| !! | GTAGCTCAGTTGGTGAGCTA+AGG | - | chr3_2:23350150-23350169 | None:intergenic | 50.0% |
| TGCTTGTTCAGCAGCTAGCT+AGG | + | chr3_2:23350539-23350558 | Msa0399770:intron | 50.0% | |
| TCAACAACAGTGTAGGGGAG+GGG | - | chr3_2:23350669-23350688 | None:intergenic | 50.0% | |
| CATCAACAACAGTGTAGGGG+AGG | - | chr3_2:23350671-23350690 | None:intergenic | 50.0% | |
| GTTTCGGTAGGCTAGGACAA+TGG | - | chr3_2:23350708-23350727 | None:intergenic | 50.0% | |
| TTCAAGGGTTTCGGTAGGCT+AGG | - | chr3_2:23350715-23350734 | None:intergenic | 50.0% | |
| CTGTGTTCAAGGGTTTCGGT+AGG | - | chr3_2:23350720-23350739 | None:intergenic | 50.0% | |
| GTGGCTGTGTTCAAGGGTTT+CGG | - | chr3_2:23350724-23350743 | None:intergenic | 50.0% | |
| ACAAGGGTGGCTGTGTTCAA+GGG | - | chr3_2:23350730-23350749 | None:intergenic | 50.0% | |
| AACAAGGGTGGCTGTGTTCA+AGG | - | chr3_2:23350731-23350750 | None:intergenic | 50.0% | |
| ! | AAGGTGTCTGGAAACAAGGG+TGG | - | chr3_2:23350743-23350762 | None:intergenic | 50.0% |
| ! | ATTTTGTCAGGTGGAGGTGG+TGG | - | chr3_2:23350772-23350791 | None:intergenic | 50.0% |
| !! | CGGGTGGACTAAATAATGGC+AGG | - | chr3_2:23350834-23350853 | None:intergenic | 50.0% |
| CAGGGCAGTTAAACACCTCA+TGG | + | chr3_2:23350859-23350878 | Msa0399770:intron | 50.0% | |
| !! | GACTAGATAAGGAGCACCCT+TGG | + | chr3_2:23350881-23350900 | Msa0399770:intron | 50.0% |
| TGAAGCCTGGCTCATACACA+TGG | + | chr3_2:23351163-23351182 | Msa0399770:CDS | 50.0% | |
| TGTCTCCATGTGTATGAGCC+AGG | - | chr3_2:23351171-23351190 | None:intergenic | 50.0% | |
| ! | TTTTGTCTGCGTTGAGGTGG+TGG | - | chr3_2:23351201-23351220 | None:intergenic | 50.0% |
| !!! | TGGTTTTGTCTGCGTTGAGG+TGG | - | chr3_2:23351204-23351223 | None:intergenic | 50.0% |
| GCATTATCAGATTCGCTGGC+TGG | + | chr3_2:23351342-23351361 | Msa0399770:CDS | 50.0% | |
| ! | GCTCTTGGGATGGATGCTTT+TGG | + | chr3_2:23351456-23351475 | Msa0399770:CDS | 50.0% |
| CCTCATCGTCATCGTCATCA+GGG | - | chr3_2:23351482-23351501 | None:intergenic | 50.0% | |
| TCCTCATCGTCATCGTCATC+AGG | - | chr3_2:23351483-23351502 | None:intergenic | 50.0% | |
| TCGAATGGCTGCTATGCAAG+AGG | + | chr3_2:23351518-23351537 | Msa0399770:CDS | 50.0% | |
| ATGCAAGAGGCCATGGTTTC+TGG | + | chr3_2:23351531-23351550 | Msa0399770:CDS | 50.0% | |
| TGCAAGAGGCCATGGTTTCT+GGG | + | chr3_2:23351532-23351551 | Msa0399770:CDS | 50.0% | |
| GCGCGAGGCGTATGTTTGAA+AGG | + | chr3_2:23347101-23347120 | Msa0399770:CDS | 55.0% | |
| TTCAGATTCTGCTGCGCCTG+TGG | + | chr3_2:23347520-23347539 | Msa0399770:CDS | 55.0% | |
| GTTCCTTCACCTGACAAGCG+TGG | + | chr3_2:23347590-23347609 | Msa0399770:CDS | 55.0% | |
| ACACCACGCTTGTCAGGTGA+AGG | - | chr3_2:23347596-23347615 | None:intergenic | 55.0% | |
| CCCTTTACACCACGCTTGTC+AGG | - | chr3_2:23347602-23347621 | None:intergenic | 55.0% | |
| TAGTGCCCCAACCTCTGCAA+TGG | + | chr3_2:23347997-23348016 | Msa0399770:CDS | 55.0% | |
| ! | TAGTTTGCGGCAAACAGGGC+AGG | - | chr3_2:23348053-23348072 | None:intergenic | 55.0% |
| GCAACTAGCGGCTCTGTATC+AGG | - | chr3_2:23349668-23349687 | None:intergenic | 55.0% | |
| TCGGTAGGCTAGGACAATGG+TGG | - | chr3_2:23350705-23350724 | None:intergenic | 55.0% | |
| !! | TGGTGGTGATGGAAGGTGTC+TGG | - | chr3_2:23350755-23350774 | None:intergenic | 55.0% |
| TAACTGCCCTGTGTTTCGGG+TGG | - | chr3_2:23350850-23350869 | None:intergenic | 55.0% | |
| CATACACATGGAGACACCGC+AGG | + | chr3_2:23351175-23351194 | Msa0399770:CDS | 55.0% | |
| ! | CATGTTGGATGTGCTCGGTG+AGG | + | chr3_2:23351239-23351258 | Msa0399770:CDS | 55.0% |
| TGCTGCTATGCAAGAGGCCA+TGG | + | chr3_2:23351434-23351453 | Msa0399770:CDS | 55.0% | |
| ATGCAAGAGGCCATGGCTCT+TGG | + | chr3_2:23351441-23351460 | Msa0399770:CDS | 55.0% | |
| TGCAAGAGGCCATGGCTCTT+GGG | + | chr3_2:23351442-23351461 | Msa0399770:CDS | 55.0% | |
| AGCATCCATCCCAAGAGCCA+TGG | - | chr3_2:23351454-23351473 | None:intergenic | 55.0% | |
| ! | CCCTGATGACGATGACGATG+AGG | + | chr3_2:23351479-23351498 | Msa0399770:CDS | 55.0% |
| TTTGCTGCTGCCAACTGCCC+CGG | + | chr3_2:23347707-23347726 | Msa0399770:CDS | 60.0% | |
| AGAACATCCACCGGGGCAGT+TGG | - | chr3_2:23347720-23347739 | None:intergenic | 60.0% | |
| ATGCGCGCTAACCACGCATC+TGG | + | chr3_2:23348537-23348556 | Msa0399770:intron | 60.0% | |
| !! | AGTAATGGGCGGAGGGGTGA+TGG | - | chr3_2:23349361-23349380 | None:intergenic | 60.0% |
| GGGGAGGGGCAAACAAGGTT+GGG | - | chr3_2:23350655-23350674 | None:intergenic | 60.0% | |
| AGGGGAGGGGCAAACAAGGT+TGG | - | chr3_2:23350656-23350675 | None:intergenic | 60.0% | |
| GTGTAGGGGAGGGGCAAACA+AGG | - | chr3_2:23350660-23350679 | None:intergenic | 60.0% | |
| !! | GTGGAGGTGGTGGTGATGGA+AGG | - | chr3_2:23350762-23350781 | None:intergenic | 60.0% |
| ! | TCAGGTGGAGGTGGTGGTGA+TGG | - | chr3_2:23350766-23350785 | None:intergenic | 60.0% |
| AGAGGCCATGGCTCTTGGGA+TGG | + | chr3_2:23351446-23351465 | Msa0399770:CDS | 60.0% | |
| GGCTGCTATGCAAGAGGCCA+TGG | + | chr3_2:23351524-23351543 | Msa0399770:CDS | 60.0% | |
| ! | TGCGTTGAGGTGGTGGCCTG+CGG | - | chr3_2:23351194-23351213 | None:intergenic | 65.0% |
| GCTGCTGCCAACTGCCCCGG+TGG | + | chr3_2:23347710-23347729 | Msa0399770:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 23346368 | 23352045 | 23346368 | ID=Msa0399770;Name=Msa0399770 |
| chr3_2 | mRNA | 23346368 | 23352045 | 23346368 | ID=Msa0399770-mRNA-1;Parent=Msa0399770;Name=Msa0399770-mRNA-1;_AED=0.27;_eAED=0.27;_QI=76|1|1|1|0.5|0.6|5|344|482 |
| chr3_2 | exon | 23346368 | 23346454 | 23346368 | ID=Msa0399770-mRNA-1:exon:4952;Parent=Msa0399770-mRNA-1 |
| chr3_2 | exon | 23347085 | 23347169 | 23347085 | ID=Msa0399770-mRNA-1:exon:4953;Parent=Msa0399770-mRNA-1 |
| chr3_2 | exon | 23347422 | 23348158 | 23347422 | ID=Msa0399770-mRNA-1:exon:4954;Parent=Msa0399770-mRNA-1 |
| chr3_2 | exon | 23348261 | 23348330 | 23348261 | ID=Msa0399770-mRNA-1:exon:4955;Parent=Msa0399770-mRNA-1 |
| chr3_2 | exon | 23351156 | 23352045 | 23351156 | ID=Msa0399770-mRNA-1:exon:4956;Parent=Msa0399770-mRNA-1 |
| chr3_2 | five_prime_UTR | 23346368 | 23346443 | 23346368 | ID=Msa0399770-mRNA-1:five_prime_utr;Parent=Msa0399770-mRNA-1 |
| chr3_2 | CDS | 23346444 | 23346454 | 23346444 | ID=Msa0399770-mRNA-1:cds;Parent=Msa0399770-mRNA-1 |
| chr3_2 | CDS | 23347085 | 23347169 | 23347085 | ID=Msa0399770-mRNA-1:cds;Parent=Msa0399770-mRNA-1 |
| chr3_2 | CDS | 23347422 | 23348158 | 23347422 | ID=Msa0399770-mRNA-1:cds;Parent=Msa0399770-mRNA-1 |
| chr3_2 | CDS | 23348261 | 23348330 | 23348261 | ID=Msa0399770-mRNA-1:cds;Parent=Msa0399770-mRNA-1 |
| chr3_2 | CDS | 23351156 | 23351701 | 23351156 | ID=Msa0399770-mRNA-1:cds;Parent=Msa0399770-mRNA-1 |
| chr3_2 | three_prime_UTR | 23351702 | 23352045 | 23351702 | ID=Msa0399770-mRNA-1:three_prime_utr;Parent=Msa0399770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
