AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0399780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0399780 MtrunA17_Chr3g0087891 88.591 298 2 4 4 271 50 345 0.0 521
Msa0399780 MtrunA17_Chr3g0087881 52.151 186 60 5 89 248 125 307 4.68e-55 185
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0399780 AT3G08505.1 68.116 207 43 2 88 271 105 311 6.00e-101 299
Msa0399780 AT3G08505.2 68.116 207 43 2 88 271 105 311 6.00e-101 299
Msa0399780 AT3G08505.3 68.116 207 43 2 88 271 105 311 6.00e-101 299

Find 102 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGACATGGCGAAATTAT+TGG 0.152147 3_2:-23356525 None:intergenic
CTTCAGAAATTGGAGCTTAT+TGG 0.164790 3_2:-23364109 None:intergenic
GTTTATATGAATTTAAAATA+TGG 0.189355 3_2:+23364440 Msa0399780:three_prime_UTR
CCTGATGTCTTTGGCAATTA+TGG 0.200868 3_2:-23359834 None:intergenic
GAAGCACTTTGAGGAGGTTT+AGG 0.234779 3_2:+23356452 Msa0399780:five_prime_UTR
TTACTTGAGCTTTGCCTTGT+AGG 0.248432 3_2:-23358489 None:intergenic
GACAATGCTTGCATCCTTTC+CGG 0.265577 3_2:+23358132 Msa0399780:CDS
GCGTATCGTGTATTAGAAAT+TGG 0.271742 3_2:+23358327 Msa0399780:CDS
GGAATTTGTCAGGAGACTTT+TGG 0.272520 3_2:+23364404 Msa0399780:three_prime_UTR
TCTTGATTGAGAAAACAAAA+AGG 0.290311 3_2:-23356431 None:intergenic
AAGAAAGAAAGATTGGAAAT+TGG 0.291707 3_2:-23356271 None:intergenic
AACTACAGTGTACACCATTT+TGG 0.303484 3_2:+23364167 Msa0399780:three_prime_UTR
AGGTAGCTTTGCGTCATCTT+GGG 0.329256 3_2:+23359795 Msa0399780:CDS
TTGTCGTTCCAAGTGTTATT+TGG 0.331364 3_2:+23358429 Msa0399780:CDS
AAGCACTTTGAGGAGGTTTA+GGG 0.335451 3_2:+23356453 Msa0399780:five_prime_UTR
CGTAGTAGTAACCCAACATT+AGG 0.336048 3_2:+23358350 Msa0399780:CDS
TTGTGCAGATTCTTGATTCC+AGG 0.338822 3_2:-23357961 None:intergenic
GAGGTAGCTTTGCGTCATCT+TGG 0.340448 3_2:+23359794 Msa0399780:CDS
TTTATATGAATTTAAAATAT+GGG 0.355203 3_2:+23364441 Msa0399780:three_prime_UTR
GATCATGTTCCCAAGATTCT+TGG 0.355575 3_2:-23364351 None:intergenic
TAAAAGTGCAAATTGTAAAA+TGG 0.356358 3_2:+23364046 Msa0399780:CDS
AATATGTGTAAAAGTTAATT+AGG 0.361095 3_2:+23364246 Msa0399780:three_prime_UTR
ATTTGTTCATTTGCTGCTGC+TGG 0.363377 3_2:+23358047 Msa0399780:CDS
ATTTAAGCATCTTAATGAAA+TGG 0.363388 3_2:+23364464 Msa0399780:three_prime_UTR
CTCTCCCCATATGACCAAAA+TGG 0.365915 3_2:-23364181 None:intergenic
TGACATTGCACCAAGAATCT+TGG 0.377266 3_2:+23364341 Msa0399780:three_prime_UTR
ATATGTTCTTCTCTTTCTTC+AGG 0.386226 3_2:-23358155 None:intergenic
TTGATTCCAGGCTTGTTCAC+TGG 0.388041 3_2:-23357949 None:intergenic
GCAAATTGTAAAATGGTAGA+TGG 0.396681 3_2:+23364053 Msa0399780:CDS
CTCAATCAAGAAGCACTTTG+AGG 0.402669 3_2:+23356443 Msa0399780:five_prime_UTR
GGATGTTAATAGCACATTGC+GGG 0.414993 3_2:+23358376 Msa0399780:CDS
AGAGAGAAACCTGATGTCTT+TGG 0.415002 3_2:-23359843 None:intergenic
TGATTCCAGGCTTGTTCACT+GGG 0.416070 3_2:-23357948 None:intergenic
TTCTTCCCAGTGAACAAGCC+TGG 0.423135 3_2:+23357943 Msa0399780:CDS
ATGAGGAAAGAAAGAAAGAT+TGG 0.426366 3_2:-23356278 None:intergenic
GAAATGGTGGTGGTGAAGAT+AGG 0.431392 3_2:-23356330 None:intergenic
GTTTCAGAATCGGCTGTACT+TGG 0.435930 3_2:+23357846 Msa0399780:CDS
TCTGAAGCATACAAAATGAA+TGG 0.437778 3_2:+23364125 Msa0399780:three_prime_UTR
ACGGCAGCTGAGCGTAAGTT+TGG 0.437819 3_2:+23358275 Msa0399780:CDS
ATTATTTACAGGAATTTGTC+AGG 0.438068 3_2:+23364394 Msa0399780:three_prime_UTR
CTGCACAACTTGACTTCCTA+AGG 0.447330 3_2:+23357976 Msa0399780:CDS
TGAAACAAGGGGCTGGTGTT+CGG 0.458109 3_2:-23357829 None:intergenic
GACATTGCACCAAGAATCTT+GGG 0.462286 3_2:+23364342 Msa0399780:three_prime_UTR
TAACATCCATCCCTAATGTT+GGG 0.466091 3_2:-23358361 None:intergenic
CCAGCCCCTTGTTTCAGAAT+CGG 0.469602 3_2:+23357836 Msa0399780:CDS
CGTCATCTTGGGGCTGCAGA+TGG 0.471622 3_2:+23359806 Msa0399780:CDS
TGTTCGGTTATTGAAGAAGA+TGG 0.473750 3_2:-23357813 None:intergenic
GGAAGATGATGTTGTTCAAT+CGG 0.474976 3_2:+23357998 Msa0399780:CDS
CCATAATTGCCAAAGACATC+AGG 0.475198 3_2:+23359834 Msa0399780:CDS
AAAATGAATGGATTGATGAT+TGG 0.482043 3_2:+23364137 Msa0399780:three_prime_UTR
ACTTTGATCCTAACGCCTCT+TGG 0.485589 3_2:+23356482 Msa0399780:five_prime_UTR
GAACAACATCATCTTCCCTT+AGG 0.486955 3_2:-23357992 None:intergenic
TTAACATCCATCCCTAATGT+TGG 0.488690 3_2:-23358362 None:intergenic
TAAGATAGCTTGCGACAGAT+AGG 0.489220 3_2:-23358404 None:intergenic
CGGTACTAGCTGCTTCTACA+AGG 0.489509 3_2:+23359153 Msa0399780:intron
GCAGCAGCAAATGAACAAAT+CGG 0.492646 3_2:-23358044 None:intergenic
AATATTAACCAAGAGGCGTT+AGG 0.495686 3_2:-23356490 None:intergenic
TGAGACACAACACAGAGGTT+AGG 0.518491 3_2:-23356239 None:intergenic
TCTCTTTCTTCAGGCCGGAA+AGG 0.522386 3_2:-23358146 None:intergenic
CAACACCATTCGATGTAACT+CGG 0.526387 3_2:-23357881 None:intergenic
GTTCTTCTCTTTCTTCAGGC+CGG 0.528004 3_2:-23358151 None:intergenic
TACAGCCGATTCTGAAACAA+GGG 0.542302 3_2:-23357841 None:intergenic
GTAGTAGTAACCCAACATTA+GGG 0.548465 3_2:+23358351 Msa0399780:CDS
ACACAACACAGAGGTTAGGT+TGG 0.556767 3_2:-23356235 None:intergenic
GGTAGCTTTGCGTCATCTTG+GGG 0.557694 3_2:+23359796 Msa0399780:CDS
AAAAGTTAATTAGGTCAATG+AGG 0.559312 3_2:+23364255 Msa0399780:three_prime_UTR
TGTTCACTGGGAAGAACAAA+GGG 0.561359 3_2:-23357936 None:intergenic
CCGATTCTGAAACAAGGGGC+TGG 0.563910 3_2:-23357836 None:intergenic
ATATCGTGATGGCCGTCTTG+AGG 0.591471 3_2:+23359772 Msa0399780:CDS
CAAGCATTGTCTTCCACATG+AGG 0.592492 3_2:-23358120 None:intergenic
TTGTTCACTGGGAAGAACAA+AGG 0.593124 3_2:-23357937 None:intergenic
TAGTAACCCAACATTAGGGA+TGG 0.597655 3_2:+23358355 Msa0399780:CDS
AATACCCGAGTTACATCGAA+TGG 0.601234 3_2:+23357876 Msa0399780:CDS
TATTGAAGAAGATGGAGTAG+AGG 0.608961 3_2:-23357805 None:intergenic
AATCAAGAAGCACTTTGAGG+AGG 0.609077 3_2:+23356446 Msa0399780:five_prime_UTR
GTAGCATACCAAATAACACT+TGG 0.613633 3_2:-23358437 None:intergenic
AAGCATTGTCTTCCACATGA+GGG 0.614385 3_2:-23358119 None:intergenic
TCGTGATGGCCGTCTTGAGG+AGG 0.617371 3_2:+23359775 Msa0399780:CDS
CATAAATCTCCGTGTACATG+AGG 0.617746 3_2:-23358095 None:intergenic
AACACCATTCGATGTAACTC+GGG 0.620122 3_2:-23357880 None:intergenic
TAATAATAATATTAACCAAG+AGG 0.624849 3_2:-23356497 None:intergenic
AGCATTGTCTTCCACATGAG+GGG 0.631001 3_2:-23358118 None:intergenic
GGAAATCATTGATACCTACA+AGG 0.631452 3_2:+23358475 Msa0399780:CDS
ATAATTTCGCCATGTCAAAG+AGG 0.631521 3_2:+23356528 Msa0399780:exon
AACTTACGCTCAGCTGCCGT+AGG 0.632534 3_2:-23358272 None:intergenic
TGCACAACTTGACTTCCTAA+GGG 0.633433 3_2:+23357977 Msa0399780:CDS
GGAGATTTATGCCCCTCATG+TGG 0.636320 3_2:+23358107 Msa0399780:CDS
TGAGGACATTGTTCCCCTCG+TGG 0.637218 3_2:-23358077 None:intergenic
GTACAGCCGATTCTGAAACA+AGG 0.638170 3_2:-23357842 None:intergenic
CTGCTGGAAACTGTCCACGA+GGG 0.638932 3_2:+23358063 Msa0399780:CDS
TGCTGGAAACTGTCCACGAG+GGG 0.639094 3_2:+23358064 Msa0399780:CDS
CTAATACACGATACGCAGAA+CGG 0.640856 3_2:-23358320 None:intergenic
TCTATCTTACCTCTTTGACA+TGG 0.648394 3_2:-23356537 None:intergenic
GAACAATGTCCTCATGTACA+CGG 0.651566 3_2:+23358086 Msa0399780:CDS
TTGCAGCATGCATATCGTGA+TGG 0.670081 3_2:+23359761 Msa0399780:intron
AAATAAGCAAAAGCATCTCG+AGG 0.674626 3_2:+23358190 Msa0399780:CDS
GCTGCTGGAAACTGTCCACG+AGG 0.694625 3_2:+23358062 Msa0399780:CDS
TGGATGTTAATAGCACATTG+CGG 0.695653 3_2:+23358375 Msa0399780:CDS
GCTTTGAAAGAACACGCTCG+AGG 0.700611 3_2:-23358250 None:intergenic
ACAGCCGATTCTGAAACAAG+GGG 0.720447 3_2:-23357840 None:intergenic
GCAAAGCTACCTCCTCAAGA+CGG 0.724386 3_2:-23359784 None:intergenic
TTGAATGAGACACAACACAG+AGG 0.766563 3_2:-23356244 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAATATTATTATG+AGG - chr3_2:23356298-23356317 None:intergenic 10.0%
!! CTATAATAAAAATAAAATTG+AGG - chr3_2:23356410-23356429 None:intergenic 10.0%
!!! TTCTTGATTATTTTTTTATA+TGG + chr3_2:23356600-23356619 Msa0399780:intron 10.0%
!!! TCTTGATTATTTTTTTATAT+GGG + chr3_2:23356601-23356620 Msa0399780:intron 10.0%
!!! TAAAAAAGTATTTATTTTGT+TGG - chr3_2:23362069-23362088 None:intergenic 10.0%
!!! GTTTATATGAATTTAAAATA+TGG + chr3_2:23364440-23364459 Msa0399780:three_prime_UTR 10.0%
!! TAATAATAATATTAACCAAG+AGG - chr3_2:23356500-23356519 None:intergenic 15.0%
!!! CTTGATTATTTTTTTATATG+GGG + chr3_2:23356602-23356621 Msa0399780:intron 15.0%
!!! TAGATTTTTTTTTGGATTAT+TGG + chr3_2:23356759-23356778 Msa0399780:intron 15.0%
!!! TTTTTTTTTTTTTGCAAGTT+TGG + chr3_2:23356985-23357004 Msa0399780:intron 15.0%
!! TTTATGTAATTTATTGTCTT+TGG + chr3_2:23357499-23357518 Msa0399780:intron 15.0%
!!! AATAAACTAAAAACAACTTT+TGG + chr3_2:23358926-23358945 Msa0399780:intron 15.0%
!!! TGCAAATTTTAAATATACTT+GGG - chr3_2:23359613-23359632 None:intergenic 15.0%
!!! TTGCAAATTTTAAATATACT+TGG - chr3_2:23359614-23359633 None:intergenic 15.0%
!! AAGTATAACATAAACTAATT+AGG - chr3_2:23359739-23359758 None:intergenic 15.0%
!!! TTTTTTTTTTTTTCTTTGAG+CGG - chr3_2:23360304-23360323 None:intergenic 15.0%
!! AAAGTTAAACTTAAATTGAT+AGG - chr3_2:23360884-23360903 None:intergenic 15.0%
!! TCAAAAAATAAAAGACTATT+TGG - chr3_2:23362139-23362158 None:intergenic 15.0%
!! AAATTAAAAAAAGACAACTA+TGG - chr3_2:23362236-23362255 None:intergenic 15.0%
!! AATATCAAAATATTAATGTC+TGG - chr3_2:23363056-23363075 None:intergenic 15.0%
!! AATAAATGAATAACTGTAAT+CGG - chr3_2:23363243-23363262 None:intergenic 15.0%
!!! TGAAAAAAGTATAAGAAAAT+TGG + chr3_2:23363830-23363849 Msa0399780:intron 15.0%
!! AATATGTGTAAAAGTTAATT+AGG + chr3_2:23364246-23364265 Msa0399780:three_prime_UTR 15.0%
!!! TGAATTTTGTTATTATTTAC+AGG + chr3_2:23364383-23364402 Msa0399780:three_prime_UTR 15.0%
!! AAAAGCAAAAGAAAAAGAAA+TGG - chr3_2:23356349-23356368 None:intergenic 20.0%
!!! ATTTTTTTTCTTCAATCATG+TGG + chr3_2:23356681-23356700 Msa0399780:intron 20.0%
!! TTGATTATAACTCAGAAATT+AGG + chr3_2:23356719-23356738 Msa0399780:intron 20.0%
!!! ATGCAAAGTAGATTTTTTTT+TGG + chr3_2:23356751-23356770 Msa0399780:intron 20.0%
!! AAGTTTGGTAAATAGTTATT+TGG + chr3_2:23357000-23357019 Msa0399780:intron 20.0%
!!! TTATAGCTTTTGAATTTTCA+CGG + chr3_2:23357173-23357192 Msa0399780:intron 20.0%
!!! AAAAGTCTCTAGAATAAAAA+GGG - chr3_2:23357311-23357330 None:intergenic 20.0%
!!! AAAAAGTCTCTAGAATAAAA+AGG - chr3_2:23357312-23357331 None:intergenic 20.0%
!!! TTTATTCTAGAGACTTTTTA+AGG + chr3_2:23357313-23357332 Msa0399780:intron 20.0%
!! ATATTAGATCATGAATCAAT+TGG - chr3_2:23358565-23358584 None:intergenic 20.0%
!!! ACTATTATGTTGCTTATATT+AGG - chr3_2:23358733-23358752 None:intergenic 20.0%
!!! TTAAGTTGTTTATCCAAATA+GGG - chr3_2:23358767-23358786 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG - chr3_2:23358768-23358787 None:intergenic 20.0%
!! TTATATCTGAGTTTATATAC+TGG - chr3_2:23359007-23359026 None:intergenic 20.0%
!!! TTTTGCTGAAATGTTTATTT+TGG + chr3_2:23359059-23359078 Msa0399780:intron 20.0%
!! TTTGGAAAGAAAAGTAAAAT+GGG - chr3_2:23359229-23359248 None:intergenic 20.0%
!!! TTTTGGAAAGAAAAGTAAAA+TGG - chr3_2:23359230-23359249 None:intergenic 20.0%
!!! CTATACGATAATTAAAGTTT+TGG - chr3_2:23359247-23359266 None:intergenic 20.0%
!!! AAACAATTGAAATTTGTTCA+CGG - chr3_2:23359349-23359368 None:intergenic 20.0%
!!! TTCATGATTTCTTTTGTATA+TGG + chr3_2:23360027-23360046 Msa0399780:intron 20.0%
!! CAATATAATTGAGTGAAATA+GGG - chr3_2:23360420-23360439 None:intergenic 20.0%
!! TCAATATAATTGAGTGAAAT+AGG - chr3_2:23360421-23360440 None:intergenic 20.0%
!!! CAATGAAGTTGATTATTTTT+CGG + chr3_2:23360764-23360783 Msa0399780:intron 20.0%
!!! GTTTAACTTTCTTGATTTTT+TGG + chr3_2:23360894-23360913 Msa0399780:intron 20.0%
!!! ACAGTCAACTAATATTTTTT+TGG - chr3_2:23361065-23361084 None:intergenic 20.0%
!! TTAGACATTATGGAATAAAT+GGG + chr3_2:23361283-23361302 Msa0399780:intron 20.0%
!! AAAAATAAAAGACTATTTGG+AGG - chr3_2:23362136-23362155 None:intergenic 20.0%
!! ATGATTTCTCAAAATGTAAT+TGG - chr3_2:23362719-23362738 None:intergenic 20.0%
!! ATAAATGAATAACTGTAATC+GGG - chr3_2:23363242-23363261 None:intergenic 20.0%
!! AATACACCAATACATATTAA+GGG - chr3_2:23363735-23363754 None:intergenic 20.0%
!! AAATACACCAATACATATTA+AGG - chr3_2:23363736-23363755 None:intergenic 20.0%
!! AAAGTATAAGAAAATTGGTA+AGG + chr3_2:23363835-23363854 Msa0399780:intron 20.0%
!!! TTTTGTTTAATCAGTTTCAA+AGG + chr3_2:23363984-23364003 Msa0399780:intron 20.0%
!!! TAAAAGTGCAAATTGTAAAA+TGG + chr3_2:23364046-23364065 Msa0399780:CDS 20.0%
!!! ATATATATGCTTTTGTACAA+TGG + chr3_2:23364078-23364097 Msa0399780:CDS 20.0%
!!! ACATTTACTTTTATGTATTG+TGG + chr3_2:23364215-23364234 Msa0399780:three_prime_UTR 20.0%
!!! GTAAACTTAATTTTTATGCT+TGG + chr3_2:23364318-23364337 Msa0399780:three_prime_UTR 20.0%
!! ATTTAAGCATCTTAATGAAA+TGG + chr3_2:23364464-23364483 Msa0399780:three_prime_UTR 20.0%
! AAGAAAGAAAGATTGGAAAT+TGG - chr3_2:23356274-23356293 None:intergenic 25.0%
!!! AAAAAAAACCTCACGTTTTT+TGG + chr3_2:23356381-23356400 Msa0399780:five_prime_UTR 25.0%
! CTTGATTGAGAAAACAAAAA+GGG - chr3_2:23356433-23356452 None:intergenic 25.0%
! TCTTGATTGAGAAAACAAAA+AGG - chr3_2:23356434-23356453 None:intergenic 25.0%
!!! ATTGGATAAGTTTTTGAAGT+TGG + chr3_2:23356777-23356796 Msa0399780:intron 25.0%
!! TTTGAAGTTGGAATTCTATT+AGG + chr3_2:23356789-23356808 Msa0399780:intron 25.0%
! AATTTGATATTTCTCCTATC+TGG + chr3_2:23356902-23356921 Msa0399780:intron 25.0%
! ATTTGATATTTCTCCTATCT+GGG + chr3_2:23356903-23356922 Msa0399780:intron 25.0%
! AGGAATTGAAAGTTGAAAAT+TGG + chr3_2:23356959-23356978 Msa0399780:intron 25.0%
! ATGATATAGCTTATTGAAGT+AGG + chr3_2:23357026-23357045 Msa0399780:intron 25.0%
! TATGCATATGTTTATTTGAG+CGG + chr3_2:23357100-23357119 Msa0399780:intron 25.0%
! AATTCAAAAGCTATAAAGAG+TGG - chr3_2:23357169-23357188 None:intergenic 25.0%
!!! AAAGTCTCTAGAATAAAAAG+GGG - chr3_2:23357310-23357329 None:intergenic 25.0%
! GCATGATTAAAATGAATTCA+TGG - chr3_2:23357376-23357395 None:intergenic 25.0%
! ATAACTCGATAACCATAAAT+CGG - chr3_2:23357659-23357678 None:intergenic 25.0%
!! ATATGCACATTTTATCAGAA+AGG + chr3_2:23357723-23357742 Msa0399780:intron 25.0%
! AAGACATAAATAGATGATGT+GGG - chr3_2:23358526-23358545 None:intergenic 25.0%
!! ACATAAAACTATCTAAGGTT+TGG - chr3_2:23358591-23358610 None:intergenic 25.0%
!! AGTGTTTTCATAAGTTATCT+TGG + chr3_2:23358891-23358910 Msa0399780:intron 25.0%
! ATTTGTTCAATACCATTTGT+AGG + chr3_2:23359083-23359102 Msa0399780:intron 25.0%
! AATGTCATAAAGCATGAATT+GGG - chr3_2:23359280-23359299 None:intergenic 25.0%
! TAATGTCATAAAGCATGAAT+TGG - chr3_2:23359281-23359300 None:intergenic 25.0%
! AAACATCATAATTGAACGTT+AGG - chr3_2:23359659-23359678 None:intergenic 25.0%
! ATGTATTAAGTTAGCGAAAT+TGG - chr3_2:23359901-23359920 None:intergenic 25.0%
! AACTTAAATGCATATTAGCA+AGG - chr3_2:23359947-23359966 None:intergenic 25.0%
!!! CTAATATGCATTTAAGTTGA+AGG + chr3_2:23359949-23359968 Msa0399780:intron 25.0%
! AAGACATACATCATTTCTAA+CGG - chr3_2:23360109-23360128 None:intergenic 25.0%
! TTAAGCAACTTCAATTCTTA+TGG - chr3_2:23360335-23360354 None:intergenic 25.0%
! AGAATTGAAGTTGCTTAATT+TGG + chr3_2:23360337-23360356 Msa0399780:intron 25.0%
!! TTTCCCTAGTATATTGTTTT+AGG - chr3_2:23360542-23360561 None:intergenic 25.0%
! ACAATATACTAGGGAAATAA+AGG + chr3_2:23360545-23360564 Msa0399780:intron 25.0%
! ACTGTATTTATGTGCTATAT+TGG + chr3_2:23360946-23360965 Msa0399780:intron 25.0%
! ATTATCTATAAGAGAACAGA+TGG - chr3_2:23361151-23361170 None:intergenic 25.0%
! TATAGATAATCTTAGTGTCT+TGG + chr3_2:23361161-23361180 Msa0399780:intron 25.0%
! GTTAGACATTATGGAATAAA+TGG + chr3_2:23361282-23361301 Msa0399780:intron 25.0%
!! TCATTTTCAGCAATCTTTTA+TGG + chr3_2:23361680-23361699 Msa0399780:intron 25.0%
! AGTTTGGAAGTGAAATAATT+AGG - chr3_2:23362032-23362051 None:intergenic 25.0%
!!! ACAATTTTTTGATTCCCAAA+TGG + chr3_2:23362158-23362177 Msa0399780:intron 25.0%
! CAGAATACTTGCATAAAAAA+TGG + chr3_2:23362307-23362326 Msa0399780:intron 25.0%
! ACTTACCATAAAAATTGAAG+AGG - chr3_2:23362377-23362396 None:intergenic 25.0%
! ATATTCCAACAAAAAAGCTT+CGG - chr3_2:23362430-23362449 None:intergenic 25.0%
!!! TGTTGGAATATTAGTTTTGT+TGG + chr3_2:23362439-23362458 Msa0399780:intron 25.0%
! AGATTGTTTGTACTTTGTAA+TGG + chr3_2:23362787-23362806 Msa0399780:intron 25.0%
!! TACTTTGTAATGGAAAGATT+TGG + chr3_2:23362797-23362816 Msa0399780:intron 25.0%
!! ACTTTGTAATGGAAAGATTT+GGG + chr3_2:23362798-23362817 Msa0399780:intron 25.0%
! CTTAAAGATATGCTATCATT+GGG - chr3_2:23363492-23363511 None:intergenic 25.0%
! CAATGATAGCATATCTTTAA+GGG + chr3_2:23363491-23363510 Msa0399780:intron 25.0%
! ATAGTACCCTTAATATGTAT+TGG + chr3_2:23363726-23363745 Msa0399780:intron 25.0%
! ATGCAAGCAATATTAATTAG+AGG + chr3_2:23363800-23363819 Msa0399780:intron 25.0%
!! TTTGCACTTTTATTACATGA+TGG - chr3_2:23364038-23364057 None:intergenic 25.0%
!! ATTTTGTATGCTTCAGAAAT+TGG - chr3_2:23364122-23364141 None:intergenic 25.0%
!!! AAAATGAATGGATTGATGAT+TGG + chr3_2:23364137-23364156 Msa0399780:three_prime_UTR 25.0%
! AAAAGTTAATTAGGTCAATG+AGG + chr3_2:23364255-23364274 Msa0399780:three_prime_UTR 25.0%
! ATTATTTACAGGAATTTGTC+AGG + chr3_2:23364394-23364413 Msa0399780:three_prime_UTR 25.0%
ATGAGGAAAGAAAGAAAGAT+TGG - chr3_2:23356281-23356300 None:intergenic 30.0%
AAAAGAAAAAGAAATGGTGG+TGG - chr3_2:23356343-23356362 None:intergenic 30.0%
AGCAAAAGAAAAAGAAATGG+TGG - chr3_2:23356346-23356365 None:intergenic 30.0%
AAAGAAAAGAAAACCCAGAT+AGG - chr3_2:23356919-23356938 None:intergenic 30.0%
TTGATTAGAGCTCAGAAATT+AGG + chr3_2:23356939-23356958 Msa0399780:intron 30.0%
ATCGACATTAATCCTTATCA+CGG - chr3_2:23357339-23357358 None:intergenic 30.0%
! CATGGTTAGAAGGTTTTTAA+CGG + chr3_2:23357418-23357437 Msa0399780:intron 30.0%
!! TATTGTCTTTGGAATCTTTC+AGG + chr3_2:23357510-23357529 Msa0399780:intron 30.0%
!! ATTGTCTTTGGAATCTTTCA+GGG + chr3_2:23357511-23357530 Msa0399780:intron 30.0%
! ATTGTGAATTTTCTCATGAC+TGG + chr3_2:23357579-23357598 Msa0399780:intron 30.0%
TATCACCAACATTATTTGGA+GGG - chr3_2:23357610-23357629 None:intergenic 30.0%
GTTGTATCACCAACATTATT+TGG - chr3_2:23357614-23357633 None:intergenic 30.0%
AAGCACAAAAAATCAGAGAA+AGG - chr3_2:23357683-23357702 None:intergenic 30.0%
ATATGTTCTTCTCTTTCTTC+AGG - chr3_2:23358158-23358177 None:intergenic 30.0%
TGCTACAAGTGAAGAAAAAA+TGG + chr3_2:23358454-23358473 Msa0399780:CDS 30.0%
GAAGACATAAATAGATGATG+TGG - chr3_2:23358527-23358546 None:intergenic 30.0%
CACAGACATAAAACTATCTA+AGG - chr3_2:23358596-23358615 None:intergenic 30.0%
ATCCTGACTAAGTTGTTATA+AGG + chr3_2:23358626-23358645 Msa0399780:intron 30.0%
TCCTGACTAAGTTGTTATAA+GGG + chr3_2:23358627-23358646 Msa0399780:intron 30.0%
AAAGTAAAATGGGTCAAACA+GGG - chr3_2:23359219-23359238 None:intergenic 30.0%
AAAAGTAAAATGGGTCAAAC+AGG - chr3_2:23359220-23359239 None:intergenic 30.0%
CTTTGGTCTCTATATGAAAA+AGG - chr3_2:23359310-23359329 None:intergenic 30.0%
GCAAACTCAATTTAGTACTT+TGG - chr3_2:23359327-23359346 None:intergenic 30.0%
TAATGACTGCAACTTATTTC+TGG + chr3_2:23359393-23359412 Msa0399780:intron 30.0%
TCATAATTGAACGTTAGGTA+GGG - chr3_2:23359654-23359673 None:intergenic 30.0%
ATCATAATTGAACGTTAGGT+AGG - chr3_2:23359655-23359674 None:intergenic 30.0%
AAGTTAGCGAAATTGGAAAA+AGG - chr3_2:23359894-23359913 None:intergenic 30.0%
!! TATGCATTTAAGTTGAAGGT+CGG + chr3_2:23359953-23359972 Msa0399780:intron 30.0%
TGTGATGTAAGTTTCAAACT+TGG + chr3_2:23359987-23360006 Msa0399780:intron 30.0%
GTGATGTAAGTTTCAAACTT+GGG + chr3_2:23359988-23360007 Msa0399780:intron 30.0%
AGACATACATCATTTCTAAC+GGG - chr3_2:23360108-23360127 None:intergenic 30.0%
!! TTATTTCTCCACTTTTCAAG+TGG + chr3_2:23360148-23360167 Msa0399780:intron 30.0%
!!! TTTTTTTTCTTTGAGCGGTA+TGG - chr3_2:23360299-23360318 None:intergenic 30.0%
ATATTGATGAGTGCAACAAA+TGG + chr3_2:23360434-23360453 Msa0399780:intron 30.0%
!!! ACGAGTTGATTTTTATGATG+AGG + chr3_2:23360493-23360512 Msa0399780:intron 30.0%
AGAGCCTAAAACAATATACT+AGG + chr3_2:23360535-23360554 Msa0399780:intron 30.0%
GAGCCTAAAACAATATACTA+GGG + chr3_2:23360536-23360555 Msa0399780:intron 30.0%
AGAGTTGTAACACTACTTTA+TGG - chr3_2:23360573-23360592 None:intergenic 30.0%
TATACAACTTCACCCTAAAA+AGG + chr3_2:23360618-23360637 Msa0399780:intron 30.0%
ATACAACTTCACCCTAAAAA+GGG + chr3_2:23360619-23360638 Msa0399780:intron 30.0%
! ACCTATCATTTCCCTTTTTA+GGG - chr3_2:23360633-23360652 None:intergenic 30.0%
TGAAAAATCCAAAGAAGTCT+TGG + chr3_2:23360683-23360702 Msa0399780:intron 30.0%
AACATTAACCAAGACTTCTT+TGG - chr3_2:23360694-23360713 None:intergenic 30.0%
GGAAATACATCACTTGATAA+CGG + chr3_2:23360741-23360760 Msa0399780:intron 30.0%
!! TATTTTTCGGTTGAAGAAGA+TGG + chr3_2:23360777-23360796 Msa0399780:intron 30.0%
GTATTTATGTGCTATATTGG+AGG + chr3_2:23360949-23360968 Msa0399780:intron 30.0%
AGATCATATGATCAGATAAC+GGG - chr3_2:23361243-23361262 None:intergenic 30.0%
GAGATCATATGATCAGATAA+CGG - chr3_2:23361244-23361263 None:intergenic 30.0%
TCTCTTACATCAAGTTCTTA+TGG + chr3_2:23361260-23361279 Msa0399780:intron 30.0%
GTTCTTATGGTTAGACATTA+TGG + chr3_2:23361273-23361292 Msa0399780:intron 30.0%
TTACATTATGCCTTAGAATC+TGG + chr3_2:23361306-23361325 Msa0399780:intron 30.0%
TACATTATGCCTTAGAATCT+GGG + chr3_2:23361307-23361326 Msa0399780:intron 30.0%
GTGTAGTGCATATAAAGTTA+GGG - chr3_2:23361381-23361400 None:intergenic 30.0%
AGTGTAGTGCATATAAAGTT+AGG - chr3_2:23361382-23361401 None:intergenic 30.0%
TAACTTTATATGCACTACAC+TGG + chr3_2:23361381-23361400 Msa0399780:intron 30.0%
CTAGTATGATATTGGACATT+CGG + chr3_2:23361623-23361642 Msa0399780:intron 30.0%
CAACATTCTTCATCTCATAA+AGG - chr3_2:23361706-23361725 None:intergenic 30.0%
CTTTATGAGATGAAGAATGT+TGG + chr3_2:23361704-23361723 Msa0399780:intron 30.0%
TTGTCAAATAATGGCTATAG+TGG - chr3_2:23361857-23361876 None:intergenic 30.0%
!! AACGAAGTGTTGTCAAATAA+TGG - chr3_2:23361866-23361885 None:intergenic 30.0%
ACAACACTAGGTTTAACATT+GGG + chr3_2:23361981-23362000 Msa0399780:intron 30.0%
! AAGCTCCTCTTCAATTTTTA+TGG + chr3_2:23362369-23362388 Msa0399780:intron 30.0%
AGAACATTGTGTAAAATGAG+TGG - chr3_2:23362503-23362522 None:intergenic 30.0%
CGATTATGTTTCAGAAAGTT+AGG + chr3_2:23362553-23362572 Msa0399780:intron 30.0%
AATCTTAAACCTTGGATCTT+AGG - chr3_2:23362772-23362791 None:intergenic 30.0%
GTACAAACAATCTTAAACCT+TGG - chr3_2:23362780-23362799 None:intergenic 30.0%
AATGGAAAGATTTGGGTAAA+AGG + chr3_2:23362805-23362824 Msa0399780:intron 30.0%
! AACCTTAGGTTTGATTTAGA+AGG + chr3_2:23362907-23362926 Msa0399780:intron 30.0%
TTCCTTCAGTGAAAAAACTA+GGG - chr3_2:23363001-23363020 None:intergenic 30.0%
ATCACCATAGAGAAGAAATT+TGG + chr3_2:23363096-23363115 Msa0399780:intron 30.0%
TCACCATAGAGAAGAAATTT+GGG + chr3_2:23363097-23363116 Msa0399780:intron 30.0%
TTTCCCAAATTTCTTCTCTA+TGG - chr3_2:23363103-23363122 None:intergenic 30.0%
AGTAAGAAAACTGTTTGCAA+GGG + chr3_2:23363146-23363165 Msa0399780:intron 30.0%
AGAGAATAATCTGTACACAA+TGG - chr3_2:23363414-23363433 None:intergenic 30.0%
CCTTAAAGATATGCTATCAT+TGG - chr3_2:23363493-23363512 None:intergenic 30.0%
CCAATGATAGCATATCTTTA+AGG + chr3_2:23363490-23363509 Msa0399780:intron 30.0%
GTCATTATACACATAGCAAA+AGG + chr3_2:23363583-23363602 Msa0399780:intron 30.0%
! CCAGATAGGTCAATTATTTT+CGG - chr3_2:23363649-23363668 None:intergenic 30.0%
AAATGCATAGTAGAATATGC+TGG + chr3_2:23363767-23363786 Msa0399780:intron 30.0%
ATAGTAGAATATGCTGGATT+GGG + chr3_2:23363773-23363792 Msa0399780:intron 30.0%
GCAAATTGTAAAATGGTAGA+TGG + chr3_2:23364053-23364072 Msa0399780:CDS 30.0%
! TCTGAAGCATACAAAATGAA+TGG + chr3_2:23364125-23364144 Msa0399780:three_prime_UTR 30.0%
!! AATATTAACCAAGAGGCGTT+AGG - chr3_2:23356493-23356512 None:intergenic 35.0%
CTTTGACATGGCGAAATTAT+TGG - chr3_2:23356528-23356547 None:intergenic 35.0%
ATAATTTCGCCATGTCAAAG+AGG + chr3_2:23356528-23356547 Msa0399780:exon 35.0%
TCTATCTTACCTCTTTGACA+TGG - chr3_2:23356540-23356559 None:intergenic 35.0%
ATTGAAGTAGGAACACAATC+AGG + chr3_2:23357038-23357057 Msa0399780:intron 35.0%
TTGAAGTAGGAACACAATCA+GGG + chr3_2:23357039-23357058 Msa0399780:intron 35.0%
! ACAATCAGGGTGTTAAATCT+TGG + chr3_2:23357052-23357071 Msa0399780:intron 35.0%
! ATGCTTTGTGTTTTCGTTTG+CGG + chr3_2:23357392-23357411 Msa0399780:intron 35.0%
ATCACCAACATTATTTGGAG+GGG - chr3_2:23357609-23357628 None:intergenic 35.0%
GTATCACCAACATTATTTGG+AGG - chr3_2:23357611-23357630 None:intergenic 35.0%
TGAAATGTACAGCATAGAAG+AGG - chr3_2:23357636-23357655 None:intergenic 35.0%
!! CTGTACATTTCACCGATTTA+TGG + chr3_2:23357644-23357663 Msa0399780:intron 35.0%
TATTGAAGAAGATGGAGTAG+AGG - chr3_2:23357808-23357827 None:intergenic 35.0%
TGTTCGGTTATTGAAGAAGA+TGG - chr3_2:23357816-23357835 None:intergenic 35.0%
GGAAGATGATGTTGTTCAAT+CGG + chr3_2:23357998-23358017 Msa0399780:CDS 35.0%
!! AAATAAGCAAAAGCATCTCG+AGG + chr3_2:23358190-23358209 Msa0399780:CDS 35.0%
GCGTATCGTGTATTAGAAAT+TGG + chr3_2:23358327-23358346 Msa0399780:CDS 35.0%
GTAGTAGTAACCCAACATTA+GGG + chr3_2:23358351-23358370 Msa0399780:CDS 35.0%
TAACATCCATCCCTAATGTT+GGG - chr3_2:23358364-23358383 None:intergenic 35.0%
TTAACATCCATCCCTAATGT+TGG - chr3_2:23358365-23358384 None:intergenic 35.0%
TGGATGTTAATAGCACATTG+CGG + chr3_2:23358375-23358394 Msa0399780:CDS 35.0%
! TTGTCGTTCCAAGTGTTATT+TGG + chr3_2:23358429-23358448 Msa0399780:CDS 35.0%
GTAGCATACCAAATAACACT+TGG - chr3_2:23358440-23358459 None:intergenic 35.0%
GGAAATCATTGATACCTACA+AGG + chr3_2:23358475-23358494 Msa0399780:CDS 35.0%
ACAACTTAGTCAGGATAGTA+TGG - chr3_2:23358622-23358641 None:intergenic 35.0%
CCTGACTAAGTTGTTATAAG+GGG + chr3_2:23358628-23358647 Msa0399780:intron 35.0%
!! TAGCATTGATATGCATGTGT+AGG + chr3_2:23358668-23358687 Msa0399780:intron 35.0%
!! AGCATTGATATGCATGTGTA+GGG + chr3_2:23358669-23358688 Msa0399780:intron 35.0%
GCAAAAAGCTAGACACATTA+GGG - chr3_2:23359045-23359064 None:intergenic 35.0%
AGCAAAAAGCTAGACACATT+AGG - chr3_2:23359046-23359065 None:intergenic 35.0%
GCAATCAATTGACCTACAAA+TGG - chr3_2:23359098-23359117 None:intergenic 35.0%
!!! GATTGCAAGCATTTTGACTT+TGG + chr3_2:23359112-23359131 Msa0399780:intron 35.0%
!!! AAGCATTTTGACTTTGGTGA+AGG + chr3_2:23359118-23359137 Msa0399780:intron 35.0%
GGTATAGCACTATAGTGTAA+GGG + chr3_2:23359537-23359556 Msa0399780:intron 35.0%
GGTACTAGTATTATCAATCG+CGG - chr3_2:23359592-23359611 None:intergenic 35.0%
CATAATTGAACGTTAGGTAG+GGG - chr3_2:23359653-23359672 None:intergenic 35.0%
! TAGGCTCTAGTTGTTCTTTA+AGG - chr3_2:23359720-23359739 None:intergenic 35.0%
TAAAGATGAGAACCAGGATA+AGG - chr3_2:23359870-23359889 None:intergenic 35.0%
AAAGGATAAAGATGAGAACC+AGG - chr3_2:23359876-23359895 None:intergenic 35.0%
ACTTAATACATGATGCCATC+AGG + chr3_2:23359910-23359929 Msa0399780:intron 35.0%
TTGTATCCAATGCTTCAACA+TGG + chr3_2:23360073-23360092 Msa0399780:intron 35.0%
! TATCTATGCCACTTGAAAAG+TGG - chr3_2:23360159-23360178 None:intergenic 35.0%
GCATAGATAAATTGCACCTT+GGG + chr3_2:23360170-23360189 Msa0399780:intron 35.0%
! TACAACTAAGCTATTTCCCA+AGG - chr3_2:23360189-23360208 None:intergenic 35.0%
TTGGGAAATAGCTTAGTTGT+AGG + chr3_2:23360188-23360207 Msa0399780:intron 35.0%
ATGATGAGGACACACTAAAT+TGG + chr3_2:23360507-23360526 Msa0399780:intron 35.0%
TGATGAGGACACACTAAATT+GGG + chr3_2:23360508-23360527 Msa0399780:intron 35.0%
ACCCTAAAAAGGGAAATGAT+AGG + chr3_2:23360629-23360648 Msa0399780:intron 35.0%
! CACCTATCATTTCCCTTTTT+AGG - chr3_2:23360634-23360653 None:intergenic 35.0%
CTAAAAAGGGAAATGATAGG+TGG + chr3_2:23360632-23360651 Msa0399780:intron 35.0%
!!! AGTACTGACGTCATTTTCAT+CGG - chr3_2:23360821-23360840 None:intergenic 35.0%
CAAGTGTTCTCAATGATAGA+TGG - chr3_2:23360990-23361009 None:intergenic 35.0%
ACTTGTTCGTAGCAAGAATA+AGG + chr3_2:23361005-23361024 Msa0399780:intron 35.0%
!! CGGTTTTGTAAGATTGAGTT+AGG - chr3_2:23361338-23361357 None:intergenic 35.0%
!! CTTACAAAACCGCTTTTGTA+AGG + chr3_2:23361346-23361365 Msa0399780:intron 35.0%
AACCAAATGCCGTAATTAGA+CGG + chr3_2:23361550-23361569 Msa0399780:intron 35.0%
! AAGGAAGCACATCATTTCTT+TGG + chr3_2:23361655-23361674 Msa0399780:intron 35.0%
! AGGAAGCACATCATTTCTTT+GGG + chr3_2:23361656-23361675 Msa0399780:intron 35.0%
ATGATCAAAGAAAGAGACCA+TGG + chr3_2:23361753-23361772 Msa0399780:intron 35.0%
ATAGCGTGTTGTGGAATAAT+AGG + chr3_2:23361890-23361909 Msa0399780:intron 35.0%
CATTTGCCAAATAGCAGATA+TGG - chr3_2:23361961-23361980 None:intergenic 35.0%
ATTTGGCAAATGACAACACT+AGG + chr3_2:23361969-23361988 Msa0399780:intron 35.0%
GACAACACTAGGTTTAACAT+TGG + chr3_2:23361980-23361999 Msa0399780:intron 35.0%
CAACACTAGGTTTAACATTG+GGG + chr3_2:23361982-23362001 Msa0399780:intron 35.0%
AAGTGAAGAAGCAACCATTT+GGG - chr3_2:23362175-23362194 None:intergenic 35.0%
AAAGTGAAGAAGCAACCATT+TGG - chr3_2:23362176-23362195 None:intergenic 35.0%
GGAAGCTATTAAGACAACTA+TGG - chr3_2:23362274-23362293 None:intergenic 35.0%
CTTCTTGTGAATTGACATCA+AGG - chr3_2:23362465-23362484 None:intergenic 35.0%
TCTCATATAAAGCTAGGTGA+GGG - chr3_2:23362597-23362616 None:intergenic 35.0%
ACGTACTCTCATATAAAGCT+AGG - chr3_2:23362603-23362622 None:intergenic 35.0%
! GACATGCTTTATTCATGTCA+TGG + chr3_2:23362623-23362642 Msa0399780:intron 35.0%
! AAAGGTAGAAAGTACATCCA+TGG + chr3_2:23362823-23362842 Msa0399780:intron 35.0%
! AAGGTAGAAAGTACATCCAT+GGG + chr3_2:23362824-23362843 Msa0399780:intron 35.0%
CTCATACTACAACTAACCTT+AGG + chr3_2:23362893-23362912 Msa0399780:intron 35.0%
CACCTTCTAAATCAAACCTA+AGG - chr3_2:23362912-23362931 None:intergenic 35.0%
GGGATTGTGAAGAGAAAAAT+AGG - chr3_2:23362935-23362954 None:intergenic 35.0%
CTTCCTTCAGTGAAAAAACT+AGG - chr3_2:23363002-23363021 None:intergenic 35.0%
GAACTTGATGAAATAGTCCT+TGG + chr3_2:23363025-23363044 Msa0399780:intron 35.0%
GAGTAAGAAAACTGTTTGCA+AGG + chr3_2:23363145-23363164 Msa0399780:intron 35.0%
CAAGGGAAATTGTCTATCAT+GGG + chr3_2:23363163-23363182 Msa0399780:intron 35.0%
GAAATTGTCTATCATGGGTT+TGG + chr3_2:23363168-23363187 Msa0399780:intron 35.0%
!! CGTAGTATTTGTGCTATTTG+AGG - chr3_2:23363297-23363316 None:intergenic 35.0%
AGTGTTAAGGCAAACCTTAA+GGG - chr3_2:23363352-23363371 None:intergenic 35.0%
CATAAAAGCTGTCAAACACA+TGG - chr3_2:23363385-23363404 None:intergenic 35.0%
! CATGTGTTTGACAGCTTTTA+TGG + chr3_2:23363383-23363402 Msa0399780:intron 35.0%
GCCAAAACAGTAAATGGAAA+GGG - chr3_2:23363451-23363470 None:intergenic 35.0%
AGCCAAAACAGTAAATGGAA+AGG - chr3_2:23363452-23363471 None:intergenic 35.0%
AGAAGAGCCAAAACAGTAAA+TGG - chr3_2:23363457-23363476 None:intergenic 35.0%
! GCATATCTTTAAGGGAGATA+TGG + chr3_2:23363499-23363518 Msa0399780:intron 35.0%
TTAGGACGACAAGTGAATAA+GGG - chr3_2:23363542-23363561 None:intergenic 35.0%
! TTTAGGACGACAAGTGAATA+AGG - chr3_2:23363543-23363562 None:intergenic 35.0%
! CTCTAGATTCCTTCTTGTTT+AGG - chr3_2:23363560-23363579 None:intergenic 35.0%
! GTCAATTATTTTCGGACTGA+GGG - chr3_2:23363641-23363660 None:intergenic 35.0%
CCGAAAATAATTGACCTATC+TGG + chr3_2:23363646-23363665 Msa0399780:intron 35.0%
TATGTGTGAAATGACCAGAT+AGG - chr3_2:23363663-23363682 None:intergenic 35.0%
CATAGTAGAATATGCTGGAT+TGG + chr3_2:23363772-23363791 Msa0399780:intron 35.0%
GAAAATTGGTAAGGTCAAGA+CGG + chr3_2:23363844-23363863 Msa0399780:intron 35.0%
! TTAGAGCATCTTAATCGCTA+GGG - chr3_2:23363884-23363903 None:intergenic 35.0%
! TTTAGAGCATCTTAATCGCT+AGG - chr3_2:23363885-23363904 None:intergenic 35.0%
CTTCAGAAATTGGAGCTTAT+TGG - chr3_2:23364112-23364131 None:intergenic 35.0%
! AACTACAGTGTACACCATTT+TGG + chr3_2:23364167-23364186 Msa0399780:three_prime_UTR 35.0%
!! TGTACACCATTTTGGTCATA+TGG + chr3_2:23364175-23364194 Msa0399780:three_prime_UTR 35.0%
!! GTACACCATTTTGGTCATAT+GGG + chr3_2:23364176-23364195 Msa0399780:three_prime_UTR 35.0%
!! TACACCATTTTGGTCATATG+GGG + chr3_2:23364177-23364196 Msa0399780:three_prime_UTR 35.0%
! GAATTTGTCAGGAGACTTTT+GGG + chr3_2:23364405-23364424 Msa0399780:three_prime_UTR 35.0%
! AATTTGTCAGGAGACTTTTG+GGG + chr3_2:23364406-23364425 Msa0399780:three_prime_UTR 35.0%
TTGAATGAGACACAACACAG+AGG - chr3_2:23356247-23356266 None:intergenic 40.0%
!! CTCAATCAAGAAGCACTTTG+AGG + chr3_2:23356443-23356462 Msa0399780:five_prime_UTR 40.0%
!! AATCAAGAAGCACTTTGAGG+AGG + chr3_2:23356446-23356465 Msa0399780:five_prime_UTR 40.0%
! AAGCACTTTGAGGAGGTTTA+GGG + chr3_2:23356453-23356472 Msa0399780:five_prime_UTR 40.0%
ATCTTGGAAATATCTCTCCC+CGG + chr3_2:23357068-23357087 Msa0399780:intron 40.0%
TTTGAGCGGTGAAAAACTTG+CGG + chr3_2:23357114-23357133 Msa0399780:intron 40.0%
GACATACATAGCGAGTGTTT+GGG - chr3_2:23357242-23357261 None:intergenic 40.0%
AGACATACATAGCGAGTGTT+TGG - chr3_2:23357243-23357262 None:intergenic 40.0%
! TCTAGAATAAAAAGGGGCAC+CGG - chr3_2:23357304-23357323 None:intergenic 40.0%
!!! GACTTTTTAAGGCCGTGATA+AGG + chr3_2:23357324-23357343 Msa0399780:intron 40.0%
! TGTTTTCGTTTGCGGAAACA+TGG + chr3_2:23357400-23357419 Msa0399780:intron 40.0%
TTTGCGGAAACATGGTTAGA+AGG + chr3_2:23357408-23357427 Msa0399780:intron 40.0%
ATAAGAACAGTCTGCACACA+AGG - chr3_2:23357480-23357499 None:intergenic 40.0%
CTGTGTAAGTTCTTTGCTCA+TGG + chr3_2:23357536-23357555 Msa0399780:intron 40.0%
AAAGCCCCTCCAAATAATGT+TGG + chr3_2:23357602-23357621 Msa0399780:intron 40.0%
!!! GTGCTTGTGTTGTTTTGTTG+TGG + chr3_2:23357697-23357716 Msa0399780:intron 40.0%
CAGAAAGGAGTTTGTGCTTA+TGG + chr3_2:23357738-23357757 Msa0399780:intron 40.0%
!! TACAGCCGATTCTGAAACAA+GGG - chr3_2:23357844-23357863 None:intergenic 40.0%
AATACCCGAGTTACATCGAA+TGG + chr3_2:23357876-23357895 Msa0399780:CDS 40.0%
AACACCATTCGATGTAACTC+GGG - chr3_2:23357883-23357902 None:intergenic 40.0%
CAACACCATTCGATGTAACT+CGG - chr3_2:23357884-23357903 None:intergenic 40.0%
TGTTCACTGGGAAGAACAAA+GGG - chr3_2:23357939-23357958 None:intergenic 40.0%
TTGTTCACTGGGAAGAACAA+AGG - chr3_2:23357940-23357959 None:intergenic 40.0%
TTGTGCAGATTCTTGATTCC+AGG - chr3_2:23357964-23357983 None:intergenic 40.0%
TGCACAACTTGACTTCCTAA+GGG + chr3_2:23357977-23357996 Msa0399780:CDS 40.0%
GAACAACATCATCTTCCCTT+AGG - chr3_2:23357995-23358014 None:intergenic 40.0%
GCAGCAGCAAATGAACAAAT+CGG - chr3_2:23358047-23358066 None:intergenic 40.0%
! ATTTGTTCATTTGCTGCTGC+TGG + chr3_2:23358047-23358066 Msa0399780:CDS 40.0%
GAACAATGTCCTCATGTACA+CGG + chr3_2:23358086-23358105 Msa0399780:CDS 40.0%
CATAAATCTCCGTGTACATG+AGG - chr3_2:23358098-23358117 None:intergenic 40.0%
! AAGCATTGTCTTCCACATGA+GGG - chr3_2:23358122-23358141 None:intergenic 40.0%
CTAATACACGATACGCAGAA+CGG - chr3_2:23358323-23358342 None:intergenic 40.0%
CGTAGTAGTAACCCAACATT+AGG + chr3_2:23358350-23358369 Msa0399780:CDS 40.0%
TAGTAACCCAACATTAGGGA+TGG + chr3_2:23358355-23358374 Msa0399780:CDS 40.0%
GGATGTTAATAGCACATTGC+GGG + chr3_2:23358376-23358395 Msa0399780:CDS 40.0%
! TAAGATAGCTTGCGACAGAT+AGG - chr3_2:23358407-23358426 None:intergenic 40.0%
TTACTTGAGCTTTGCCTTGT+AGG - chr3_2:23358492-23358511 None:intergenic 40.0%
CCCCTTATAACAACTTAGTC+AGG - chr3_2:23358631-23358650 None:intergenic 40.0%
! GCATTGATATGCATGTGTAG+GGG + chr3_2:23358670-23358689 Msa0399780:intron 40.0%
AAGCATGTGTGAGACTGTTT+GGG - chr3_2:23358981-23359000 None:intergenic 40.0%
TAAGCATGTGTGAGACTGTT+TGG - chr3_2:23358982-23359001 None:intergenic 40.0%
!! TAGACACATTAGGGCTAGTT+TGG - chr3_2:23359036-23359055 None:intergenic 40.0%
TAAAATGGGTCAAACAGGGA+GGG - chr3_2:23359215-23359234 None:intergenic 40.0%
! AAGTTGCAGTCATTAGCTTC+AGG - chr3_2:23359388-23359407 None:intergenic 40.0%
CGGTATAGCACTATAGTGTA+AGG + chr3_2:23359536-23359555 Msa0399780:intron 40.0%
CCTGATGTCTTTGGCAATTA+TGG - chr3_2:23359837-23359856 None:intergenic 40.0%
CCATAATTGCCAAAGACATC+AGG + chr3_2:23359834-23359853 Msa0399780:CDS 40.0%
AGAGAGAAACCTGATGTCTT+TGG - chr3_2:23359846-23359865 None:intergenic 40.0%
AATGCTTCAACATGGTGCTT+GGG + chr3_2:23360081-23360100 Msa0399780:intron 40.0%
GGCATAGATAAATTGCACCT+TGG + chr3_2:23360169-23360188 Msa0399780:intron 40.0%
!! ATGATAGGTGGTTGATGATG+AGG + chr3_2:23360644-23360663 Msa0399780:intron 40.0%
!! GGTTGATGATGAGGAATTTG+AGG + chr3_2:23360653-23360672 Msa0399780:intron 40.0%
GATGAGGAATTTGAGGAGAA+TGG + chr3_2:23360660-23360679 Msa0399780:intron 40.0%
TCCAAAGCAGAAGAAGTAGA+TGG + chr3_2:23360720-23360739 Msa0399780:intron 40.0%
TCCATCTACTTCTTCTGCTT+TGG - chr3_2:23360724-23360743 None:intergenic 40.0%
GTGTTCTCAATGATAGATGG+CGG - chr3_2:23360987-23361006 None:intergenic 40.0%
TTAGTTGACTGTAGCTGTGT+TGG + chr3_2:23361073-23361092 Msa0399780:intron 40.0%
CTATAAGAGAACAGATGGTG+AGG - chr3_2:23361146-23361165 None:intergenic 40.0%
TAACAAGGTCACCACTAACA+GGG - chr3_2:23361217-23361236 None:intergenic 40.0%
!! TCAGATAACGGGTTGTAACA+AGG - chr3_2:23361232-23361251 None:intergenic 40.0%
ACTACACTGGTCATATCTCT+AGG + chr3_2:23361394-23361413 Msa0399780:intron 40.0%
CATATCTCTAGGCAATGTGA+AGG + chr3_2:23361405-23361424 Msa0399780:intron 40.0%
ATCCGTCTAATTACGGCATT+TGG - chr3_2:23361555-23361574 None:intergenic 40.0%
AATGCCGTAATTAGACGGAT+AGG + chr3_2:23361555-23361574 Msa0399780:intron 40.0%
ATGCCGTAATTAGACGGATA+GGG + chr3_2:23361556-23361575 Msa0399780:intron 40.0%
AGGCGGAATTTCCAACATTA+TGG + chr3_2:23361593-23361612 Msa0399780:intron 40.0%
GGCGGAATTTCCAACATTAT+GGG + chr3_2:23361594-23361613 Msa0399780:intron 40.0%
GCGGAATTTCCAACATTATG+GGG + chr3_2:23361595-23361614 Msa0399780:intron 40.0%
CGGAATTTCCAACATTATGG+GGG + chr3_2:23361596-23361615 Msa0399780:intron 40.0%
TGATATTGGACATTCGGACT+AGG + chr3_2:23361629-23361648 Msa0399780:intron 40.0%
! GGAAGCACATCATTTCTTTG+GGG + chr3_2:23361657-23361676 Msa0399780:intron 40.0%
! TCACAACACTGATTAGACCA+TGG - chr3_2:23361773-23361792 None:intergenic 40.0%
! TCGTTCTAAATAGCGTGTTG+TGG + chr3_2:23361881-23361900 Msa0399780:intron 40.0%
TTGCCAAATAGCAGATATGG+CGG - chr3_2:23361958-23361977 None:intergenic 40.0%
GGATAGCAGCAATCTAAGTT+TGG - chr3_2:23362048-23362067 None:intergenic 40.0%
TCATATAAAGCTAGGTGAGG+GGG - chr3_2:23362595-23362614 None:intergenic 40.0%
CTCATATAAAGCTAGGTGAG+GGG - chr3_2:23362596-23362615 None:intergenic 40.0%
CTCTCATATAAAGCTAGGTG+AGG - chr3_2:23362598-23362617 None:intergenic 40.0%
TAAATACCGCCTAAGATCCA+AGG + chr3_2:23362760-23362779 Msa0399780:intron 40.0%
CTTAAACCTTGGATCTTAGG+CGG - chr3_2:23362769-23362788 None:intergenic 40.0%
! AGGTAGAAAGTACATCCATG+GGG + chr3_2:23362825-23362844 Msa0399780:intron 40.0%
!! ATGTTCTAAGAACTCCAGAG+AGG - chr3_2:23362869-23362888 None:intergenic 40.0%
TTCACAATCCCATTGTGATG+TGG + chr3_2:23362944-23362963 Msa0399780:intron 40.0%
TCACAACACCACATCACAAT+GGG - chr3_2:23362955-23362974 None:intergenic 40.0%
!!! TGCCCTAGTTTTTTCACTGA+AGG + chr3_2:23362996-23363015 Msa0399780:intron 40.0%
ATTAATGTCTGGCAATGCCA+AGG - chr3_2:23363045-23363064 None:intergenic 40.0%
GCAAGGGAAATTGTCTATCA+TGG + chr3_2:23363162-23363181 Msa0399780:intron 40.0%
! TTGTCTATCATGGGTTTGGT+CGG + chr3_2:23363172-23363191 Msa0399780:intron 40.0%
CAGTGTTAAGGCAAACCTTA+AGG - chr3_2:23363353-23363372 None:intergenic 40.0%
GTTTGCCTTAACACTGAACT+TGG + chr3_2:23363357-23363376 Msa0399780:intron 40.0%
! GCCCTTTCCATTTACTGTTT+TGG + chr3_2:23363447-23363466 Msa0399780:intron 40.0%
! TCTTTAAGGGAGATATGGTC+AGG + chr3_2:23363504-23363523 Msa0399780:intron 40.0%
ATATGGTCAGGTCATTCTTG+TGG + chr3_2:23363516-23363535 Msa0399780:intron 40.0%
ACTTGTCGTCCTAAACAAGA+AGG + chr3_2:23363548-23363567 Msa0399780:intron 40.0%
CTGAGGGAGTAATTCATAAC+AGG - chr3_2:23363625-23363644 None:intergenic 40.0%
! GGTCAATTATTTTCGGACTG+AGG - chr3_2:23363642-23363661 None:intergenic 40.0%
!! ATTTTGGTCATATGGGGAGA+GGG + chr3_2:23364183-23364202 Msa0399780:three_prime_UTR 40.0%
TGACATTGCACCAAGAATCT+TGG + chr3_2:23364341-23364360 Msa0399780:three_prime_UTR 40.0%
GACATTGCACCAAGAATCTT+GGG + chr3_2:23364342-23364361 Msa0399780:three_prime_UTR 40.0%
GATCATGTTCCCAAGATTCT+TGG - chr3_2:23364354-23364373 None:intergenic 40.0%
! GGAATTTGTCAGGAGACTTT+TGG + chr3_2:23364404-23364423 Msa0399780:three_prime_UTR 40.0%
ACACAACACAGAGGTTAGGT+TGG - chr3_2:23356238-23356257 None:intergenic 45.0%
TGAGACACAACACAGAGGTT+AGG - chr3_2:23356242-23356261 None:intergenic 45.0%
!! GAAATGGTGGTGGTGAAGAT+AGG - chr3_2:23356333-23356352 None:intergenic 45.0%
TGAGGTAGCCAAAAAACGTG+AGG - chr3_2:23356392-23356411 None:intergenic 45.0%
! GAAGCACTTTGAGGAGGTTT+AGG + chr3_2:23356452-23356471 Msa0399780:five_prime_UTR 45.0%
ACTTTGATCCTAACGCCTCT+TGG + chr3_2:23356482-23356501 Msa0399780:five_prime_UTR 45.0%
TCTTGGAAATATCTCTCCCC+GGG + chr3_2:23357069-23357088 Msa0399780:intron 45.0%
! AATGCTGCTTGAATGCACGT+TGG + chr3_2:23357199-23357218 Msa0399780:intron 45.0%
ATAGCGAGTGTTTGGGAAAG+CGG - chr3_2:23357235-23357254 None:intergenic 45.0%
!! ACAGCCGATTCTGAAACAAG+GGG - chr3_2:23357843-23357862 None:intergenic 45.0%
!! GTACAGCCGATTCTGAAACA+AGG - chr3_2:23357845-23357864 None:intergenic 45.0%
GTTTCAGAATCGGCTGTACT+TGG + chr3_2:23357846-23357865 Msa0399780:CDS 45.0%
! TGATTCCAGGCTTGTTCACT+GGG - chr3_2:23357951-23357970 None:intergenic 45.0%
! TTGATTCCAGGCTTGTTCAC+TGG - chr3_2:23357952-23357971 None:intergenic 45.0%
CTGCACAACTTGACTTCCTA+AGG + chr3_2:23357976-23357995 Msa0399780:CDS 45.0%
GAACAAATCGGAAGCTCAGA+AGG - chr3_2:23358035-23358054 None:intergenic 45.0%
AGCATTGTCTTCCACATGAG+GGG - chr3_2:23358121-23358140 None:intergenic 45.0%
! CAAGCATTGTCTTCCACATG+AGG - chr3_2:23358123-23358142 None:intergenic 45.0%
GACAATGCTTGCATCCTTTC+CGG + chr3_2:23358132-23358151 Msa0399780:CDS 45.0%
GTTCTTCTCTTTCTTCAGGC+CGG - chr3_2:23358154-23358173 None:intergenic 45.0%
GCGTGTTCTTTCAAAGCCTA+CGG + chr3_2:23358256-23358275 Msa0399780:intron 45.0%
AGACTGTTTGGGAGAGCTTA+AGG - chr3_2:23358970-23358989 None:intergenic 45.0%
!! ACATTAGGGCTAGTTTGGAC+AGG - chr3_2:23359031-23359050 None:intergenic 45.0%
! AGAAGCAGCTAGTACCGAAA+GGG - chr3_2:23359150-23359169 None:intergenic 45.0%
! TAGAAGCAGCTAGTACCGAA+AGG - chr3_2:23359151-23359170 None:intergenic 45.0%
GTAAAATGGGTCAAACAGGG+AGG - chr3_2:23359216-23359235 None:intergenic 45.0%
GAGACTATAGCCTATAGCAG+CGG + chr3_2:23359516-23359535 Msa0399780:intron 45.0%
TAGTGCTATACCGCTGCTAT+AGG - chr3_2:23359529-23359548 None:intergenic 45.0%
TTGCAGCATGCATATCGTGA+TGG + chr3_2:23359761-23359780 Msa0399780:intron 45.0%
! AGGTAGCTTTGCGTCATCTT+GGG + chr3_2:23359795-23359814 Msa0399780:CDS 45.0%
GGTTTCTCTCTACCTTATCC+TGG + chr3_2:23359855-23359874 Msa0399780:intron 45.0%
! ACATGATGCCATCAGGTTGT+CGG + chr3_2:23359917-23359936 Msa0399780:intron 45.0%
AAGGAAATCCGACAACCTGA+TGG - chr3_2:23359928-23359947 None:intergenic 45.0%
CAAGCACCATGTTGAAGCAT+TGG - chr3_2:23360082-23360101 None:intergenic 45.0%
CAATGCTTCAACATGGTGCT+TGG + chr3_2:23360080-23360099 Msa0399780:intron 45.0%
TGAGTGCAACAAATGGCTAG+TGG + chr3_2:23360441-23360460 Msa0399780:intron 45.0%
GAGTGCAACAAATGGCTAGT+GGG + chr3_2:23360442-23360461 Msa0399780:intron 45.0%
AAATGGCTAGTGGGAGAGAA+TGG + chr3_2:23360451-23360470 Msa0399780:intron 45.0%
GTGCTATATTGGAGGACTTG+TGG + chr3_2:23360957-23360976 Msa0399780:intron 45.0%
GTAACAAGGTCACCACTAAC+AGG - chr3_2:23361218-23361237 None:intergenic 45.0%
TATGCCTTAGAATCTGGGTC+TGG + chr3_2:23361312-23361331 Msa0399780:intron 45.0%
!! AAAACCGCTTTTGTAAGGCG+AGG + chr3_2:23361351-23361370 Msa0399780:intron 45.0%
!! AAACCGCTTTTGTAAGGCGA+GGG + chr3_2:23361352-23361371 Msa0399780:intron 45.0%
! TCTAGGCAATGTGAAGGTGT+TGG + chr3_2:23361411-23361430 Msa0399780:intron 45.0%
TGCCGTAATTAGACGGATAG+GGG + chr3_2:23361557-23361576 Msa0399780:intron 45.0%
CTCCCCTATCCGTCTAATTA+CGG - chr3_2:23361562-23361581 None:intergenic 45.0%
TGGAAATTCCGCCTTTGTTG+CGG - chr3_2:23361587-23361606 None:intergenic 45.0%
GGGGTTCGCTAGTATGATAT+TGG + chr3_2:23361615-23361634 Msa0399780:intron 45.0%
! GCTAAGGCGCTATAGATTAG+CGG - chr3_2:23361934-23361953 None:intergenic 45.0%
GTATTCTGCAGAGACAACAC+AGG - chr3_2:23362295-23362314 None:intergenic 45.0%
! CAACAAAAAAGCTTCGGTGC+TGG - chr3_2:23362424-23362443 None:intergenic 45.0%
!!! CAGCACCGAAGCTTTTTTGT+TGG + chr3_2:23362422-23362441 Msa0399780:intron 45.0%
TGTATGAACAGCTTCCTCTC+TGG + chr3_2:23362852-23362871 Msa0399780:intron 45.0%
GTCACAACACCACATCACAA+TGG - chr3_2:23362956-23362975 None:intergenic 45.0%
! TGTCTATCATGGGTTTGGTC+GGG + chr3_2:23363173-23363192 Msa0399780:intron 45.0%
GATTTGATGGAGAAACTCGC+TGG + chr3_2:23363195-23363214 Msa0399780:intron 45.0%
TGGCTCCAAGTTCAGTGTTA+AGG - chr3_2:23363365-23363384 None:intergenic 45.0%
!! ATGGAAAGGGCATTGCACAA+AGG - chr3_2:23363438-23363457 None:intergenic 45.0%
!! GCACAGTACAGCTTTTTCTC+TGG - chr3_2:23364012-23364031 None:intergenic 45.0%
CTCTCCCCATATGACCAAAA+TGG - chr3_2:23364184-23364203 None:intergenic 45.0%
!! CATTTTGGTCATATGGGGAG+AGG + chr3_2:23364182-23364201 Msa0399780:three_prime_UTR 45.0%
! TTTTGGTCATATGGGGAGAG+GGG + chr3_2:23364184-23364203 Msa0399780:three_prime_UTR 45.0%
!!! TTTATATGAATTTAAAATAT+GGG + chr3_2:23364441-23364460 Msa0399780:three_prime_UTR 5.0%
CTTGGAAATATCTCTCCCCG+GGG + chr3_2:23357070-23357089 Msa0399780:intron 50.0%
TTGGAAATATCTCTCCCCGG+GGG + chr3_2:23357071-23357090 Msa0399780:intron 50.0%
! ATATGCATAGCCTTACCCCC+GGG - chr3_2:23357089-23357108 None:intergenic 50.0%
! CATATGCATAGCCTTACCCC+CGG - chr3_2:23357090-23357109 None:intergenic 50.0%
CGGTGAAAAACTTGCGGTGA+TGG + chr3_2:23357120-23357139 Msa0399780:intron 50.0%
!! GAATAAAAAGGGGCACCGGA+TGG - chr3_2:23357300-23357319 None:intergenic 50.0%
CTCATGGAGCGTGTCTGAAA+GGG + chr3_2:23357552-23357571 Msa0399780:intron 50.0%
TCATGGAGCGTGTCTGAAAG+GGG + chr3_2:23357553-23357572 Msa0399780:intron 50.0%
! TGAAACAAGGGGCTGGTGTT+CGG - chr3_2:23357832-23357851 None:intergenic 50.0%
! CCAGCCCCTTGTTTCAGAAT+CGG + chr3_2:23357836-23357855 Msa0399780:CDS 50.0%
TTCTTCCCAGTGAACAAGCC+TGG + chr3_2:23357943-23357962 Msa0399780:CDS 50.0%
GGAGATTTATGCCCCTCATG+TGG + chr3_2:23358107-23358126 Msa0399780:CDS 50.0%
TCTCTTTCTTCAGGCCGGAA+AGG - chr3_2:23358149-23358168 None:intergenic 50.0%
!! GCTTTGAAAGAACACGCTCG+AGG - chr3_2:23358253-23358272 None:intergenic 50.0%
GTTCAGAGTGACGCCCTATT+TGG + chr3_2:23358751-23358770 Msa0399780:intron 50.0%
GGTGAAGGAAACTGCCCTTT+CGG + chr3_2:23359133-23359152 Msa0399780:intron 50.0%
CGGTACTAGCTGCTTCTACA+AGG + chr3_2:23359153-23359172 Msa0399780:intron 50.0%
ATATCGTGATGGCCGTCTTG+AGG + chr3_2:23359772-23359791 Msa0399780:CDS 50.0%
GCAAAGCTACCTCCTCAAGA+CGG - chr3_2:23359787-23359806 None:intergenic 50.0%
! GAGGTAGCTTTGCGTCATCT+TGG + chr3_2:23359794-23359813 Msa0399780:CDS 50.0%
! GGTAGCTTTGCGTCATCTTG+GGG + chr3_2:23359796-23359815 Msa0399780:CDS 50.0%
TAGGCCAGACCCAGATTCTA+AGG - chr3_2:23361319-23361338 None:intergenic 50.0%
AAGCCCTCGCCTTACAAAAG+CGG - chr3_2:23361358-23361377 None:intergenic 50.0%
!! AGGCAATGTGAAGGTGTTGG+AGG + chr3_2:23361414-23361433 Msa0399780:intron 50.0%
CGTAATTAGACGGATAGGGG+AGG + chr3_2:23361560-23361579 Msa0399780:intron 50.0%
CTAGCGAACCCCCATAATGT+TGG - chr3_2:23361607-23361626 None:intergenic 50.0%
! GGACATTCGGACTAGGTAGA+AGG + chr3_2:23361636-23361655 Msa0399780:intron 50.0%
! GCTATAGCTTTACAGCGCAG+TGG - chr3_2:23361833-23361852 None:intergenic 50.0%
!! GAGGGGGTATTGATAAGACG+CGG - chr3_2:23362579-23362598 None:intergenic 50.0%
CTGTTCATACAGCAACCCCA+TGG - chr3_2:23362843-23362862 None:intergenic 50.0%
! TGGGTTTGGTCGGGATTTGA+TGG + chr3_2:23363182-23363201 Msa0399780:intron 50.0%
TTGATGGAGAAACTCGCTGG+TGG + chr3_2:23363198-23363217 Msa0399780:intron 50.0%
TGCGGATGAAAGAGCCCTTA+AGG + chr3_2:23363335-23363354 Msa0399780:intron 50.0%
GAGCATCTTAATCGCTAGGG+AGG - chr3_2:23363881-23363900 None:intergenic 50.0%
AATATCTCTCCCCGGGGGTA+AGG + chr3_2:23357076-23357095 Msa0399780:intron 55.0%
! TATGCATAGCCTTACCCCCG+GGG - chr3_2:23357088-23357107 None:intergenic 55.0%
TATCCTCCCCAGATTCCACC+TGG + chr3_2:23357262-23357281 Msa0399780:intron 55.0%
GCTCATGGAGCGTGTCTGAA+AGG + chr3_2:23357551-23357570 Msa0399780:intron 55.0%
GTGCTTATGGTAGTCGCTGC+AGG + chr3_2:23357751-23357770 Msa0399780:intron 55.0%
!! CCGATTCTGAAACAAGGGGC+TGG - chr3_2:23357839-23357858 None:intergenic 55.0%
CTGCTGGAAACTGTCCACGA+GGG + chr3_2:23358063-23358082 Msa0399780:CDS 55.0%
TGCTGGAAACTGTCCACGAG+GGG + chr3_2:23358064-23358083 Msa0399780:CDS 55.0%
TGAGGACATTGTTCCCCTCG+TGG - chr3_2:23358080-23358099 None:intergenic 55.0%
AACTTACGCTCAGCTGCCGT+AGG - chr3_2:23358275-23358294 None:intergenic 55.0%
ACGGCAGCTGAGCGTAAGTT+TGG + chr3_2:23358275-23358294 Msa0399780:CDS 55.0%
ATGGGTCAAACAGGGAGGGA+GGG - chr3_2:23359211-23359230 None:intergenic 55.0%
AATGGGTCAAACAGGGAGGG+AGG - chr3_2:23359212-23359231 None:intergenic 55.0%
ATAGGGGAGGACCGCAACAA+AGG + chr3_2:23361573-23361592 Msa0399780:intron 55.0%
TAGCAGATATGGCGGCGCTA+AGG - chr3_2:23361950-23361969 None:intergenic 55.0%
GCGCCGCCATATCTGCTATT+TGG + chr3_2:23361952-23361971 Msa0399780:intron 55.0%
!! CGGTGCTGGTGCATCTTGTT+TGG - chr3_2:23362410-23362429 None:intergenic 55.0%
ATGGAGAAACTCGCTGGTGG+TGG + chr3_2:23363201-23363220 Msa0399780:intron 55.0%
GGGCTCTTTCATCCGCACAA+GGG - chr3_2:23363332-23363351 None:intergenic 55.0%
AGGGCTCTTTCATCCGCACA+AGG - chr3_2:23363333-23363352 None:intergenic 55.0%
CTCCCCAGATTCCACCTGGT+GGG + chr3_2:23357266-23357285 Msa0399780:intron 60.0%
CTCCCACCAGGTGGAATCTG+GGG - chr3_2:23357271-23357290 None:intergenic 60.0%
GCTCCCACCAGGTGGAATCT+GGG - chr3_2:23357272-23357291 None:intergenic 60.0%
GCTGCTGGAAACTGTCCACG+AGG + chr3_2:23358062-23358081 Msa0399780:CDS 60.0%
GCATGTGTAGGGGCTGCAGA+TGG + chr3_2:23358680-23358699 Msa0399780:intron 60.0%
TCGTGATGGCCGTCTTGAGG+AGG + chr3_2:23359775-23359794 Msa0399780:CDS 60.0%
CGTCATCTTGGGGCTGCAGA+TGG + chr3_2:23359806-23359825 Msa0399780:CDS 60.0%
AAACCATGCGCGCCCTTGTG+CGG + chr3_2:23363317-23363336 Msa0399780:intron 60.0%
CCACCAGGTGGAATCTGGGG+AGG - chr3_2:23357268-23357287 None:intergenic 65.0%
CCTCCCCAGATTCCACCTGG+TGG + chr3_2:23357265-23357284 Msa0399780:intron 65.0%
GGCTCCCACCAGGTGGAATC+TGG - chr3_2:23357273-23357292 None:intergenic 65.0%
TGGTGGGAGCCTCGTCCATC+CGG + chr3_2:23357282-23357301 Msa0399780:intron 65.0%
!! AAAGGGGCACCGGATGGACG+AGG - chr3_2:23357294-23357313 None:intergenic 65.0%
GGGGAGGACCGCAACAAAGG+CGG + chr3_2:23361576-23361595 Msa0399780:intron 65.0%
TGGACGAGGCTCCCACCAGG+TGG - chr3_2:23357280-23357299 None:intergenic 70.0%
GGATGGACGAGGCTCCCACC+AGG - chr3_2:23357283-23357302 None:intergenic 70.0%
! CATCCGCACAAGGGCGCGCA+TGG - chr3_2:23363323-23363342 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 23356204 23364493 23356204 ID=Msa0399780;Name=Msa0399780
chr3_2 mRNA 23356204 23364493 23356204 ID=Msa0399780-mRNA-1;Parent=Msa0399780;Name=Msa0399780-mRNA-1;_AED=0.30;_eAED=0.30;_QI=335|0.16|0.42|1|0.16|0.28|7|378|310
chr3_2 exon 23356204 23356549 23356204 ID=Msa0399780-mRNA-1:exon:4957;Parent=Msa0399780-mRNA-1
chr3_2 exon 23357773 23358019 23357773 ID=Msa0399780-mRNA-1:exon:4958;Parent=Msa0399780-mRNA-1
chr3_2 exon 23358041 23358259 23358041 ID=Msa0399780-mRNA-1:exon:4959;Parent=Msa0399780-mRNA-1
chr3_2 exon 23358272 23358507 23358272 ID=Msa0399780-mRNA-1:exon:4960;Parent=Msa0399780-mRNA-1
chr3_2 exon 23359162 23359174 23359162 ID=Msa0399780-mRNA-1:exon:4961;Parent=Msa0399780-mRNA-1
chr3_2 exon 23359767 23359855 23359767 ID=Msa0399780-mRNA-1:exon:4962;Parent=Msa0399780-mRNA-1
chr3_2 exon 23363998 23364493 23363998 ID=Msa0399780-mRNA-1:exon:4963;Parent=Msa0399780-mRNA-1
chr3_2 five_prime_UTR 23356204 23356538 23356204 ID=Msa0399780-mRNA-1:five_prime_utr;Parent=Msa0399780-mRNA-1
chr3_2 CDS 23356539 23356549 23356539 ID=Msa0399780-mRNA-1:cds;Parent=Msa0399780-mRNA-1
chr3_2 CDS 23357773 23358019 23357773 ID=Msa0399780-mRNA-1:cds;Parent=Msa0399780-mRNA-1
chr3_2 CDS 23358041 23358259 23358041 ID=Msa0399780-mRNA-1:cds;Parent=Msa0399780-mRNA-1
chr3_2 CDS 23358272 23358507 23358272 ID=Msa0399780-mRNA-1:cds;Parent=Msa0399780-mRNA-1
chr3_2 CDS 23359162 23359174 23359162 ID=Msa0399780-mRNA-1:cds;Parent=Msa0399780-mRNA-1
chr3_2 CDS 23359767 23359855 23359767 ID=Msa0399780-mRNA-1:cds;Parent=Msa0399780-mRNA-1
chr3_2 CDS 23363998 23364115 23363998 ID=Msa0399780-mRNA-1:cds;Parent=Msa0399780-mRNA-1
chr3_2 three_prime_UTR 23364116 23364493 23364116 ID=Msa0399780-mRNA-1:three_prime_utr;Parent=Msa0399780-mRNA-1
Gene Sequence

>Msa0399780

ATGTCAAAGAGGTATGATCATGTCAAAGCTTCTCGAGCACAGTCCTCTACTCCATCTTCTTCAATAACCGAACACCAGCCCCTTGTTTCAGAATCGGCTGTACTTGGTAATACTAATACCCGAGTTACATCGAATGGTGTTGCTACAGCTGCAGAATTTTCTCTTTTCAGCACTCCCTTTGTTCTTCCCAGTGAACAAGCCTGGAATCAAGAATCTGCACAACTTGACTTCCTAAGGGAAGATGATGTTGTTCAATCGCTTCCGATTTGTTCATTTGCTGCTGCTGGAAACTGTCCACGAGGGGAACAATGTCCTCATGTACACGGAGATTTATGCCCCTCATGTGGAAGACAATGCTTGCATCCTTTCCGGCCTGAAGAAAGAGAAGAACATATGATGAGTTGCAAAAATAAGCAAAAGCATCTCGAGGCATTGAAAAGAAGTCAAGAAATTGAATGCAGTGTTTGCCTCGAGCGTCCTACGGCAGCTGAGCGTAAGTTTGGTCTGCTATCTGAATGTGATCATCCGTTCTGCGTATCGTGTATTAGAAATTGGCGTAGTAGTAACCCAACATTAGGGATGGATGTTAATAGCACATTGCGGGCTTGTCCTATCTGTCGCAAGCTATCTTACTTTGTCGTTCCAAGTGTTATTTGGTATGCTACAAGTGAAGAAAAAATGGAAATCATTGATACCTACAAGGCAAAGCTCAACTGCTTCTACAAGCATGCATATCGTGATGGCCGTCTTGAGGAGGTAGCTTTGCGTCATCTTGGGGCTGCAGATGGCGACACCATAATTGCCAAAGACATCAGTTTCAAAGGTACCAGAGAAAAAGCTGTACTGTGCATTCCATCATGTAATAAAAGTGCAAATTGTAAAATGGTAGATGGACATATATATGCTTTTGTACAATGGAATAAATTCCAATAA
Protein sequence

>Msa0399780

MSKRYDHVKASRAQSSTPSSSITEHQPLVSESAVLGNTNTRVTSNGVATAAEFSLFSTPFVLPSEQAWNQESAQLDFLREDDVVQSLPICSFAAAGNCPRGEQCPHVHGDLCPSCGRQCLHPFRPEEREEHMMSCKNKQKHLEALKRSQEIECSVCLERPTAAERKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWYATSEEKMEIIDTYKAKLNCFYKHAYRDGRLEEVALRHLGAADGDTIIAKDISFKGTREKAVLCIPSCNKSANCKMVDGHIYAFVQWNKFQ*