Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402540 | KEH33319.1 | 90.306 | 196 | 15 | 2 | 1 | 196 | 1 | 192 | 1.10e-124 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402540 | sp|Q9M9U9|RKD1_ARATH | 62.500 | 128 | 41 | 2 | 48 | 168 | 112 | 239 | 8.03e-50 | 165 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402540 | A0A072UU07 | 90.306 | 196 | 15 | 2 | 1 | 196 | 1 | 192 | 5.25e-125 | 360 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0402540 | TF | RWP-RK |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402540 | MtrunA17_Chr3g0092141 | 90.306 | 196 | 15 | 2 | 1 | 196 | 1 | 192 | 1.01e-128 | 360 |
| Msa0402540 | MtrunA17_Chr4g0060761 | 53.933 | 178 | 69 | 5 | 5 | 175 | 101 | 272 | 1.49e-54 | 174 |
| Msa0402540 | MtrunA17_Chr3g0127001 | 49.107 | 112 | 51 | 1 | 61 | 172 | 154 | 259 | 7.01e-31 | 113 |
| Msa0402540 | MtrunA17_Chr1g0182631 | 47.321 | 112 | 53 | 1 | 61 | 172 | 127 | 232 | 8.05e-29 | 107 |
| Msa0402540 | MtrunA17_Chr5g0406901 | 36.719 | 128 | 73 | 2 | 47 | 167 | 188 | 314 | 1.96e-22 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402540 | AT1G18790.1 | 62.500 | 128 | 41 | 2 | 48 | 168 | 112 | 239 | 8.17e-51 | 165 |
| Msa0402540 | AT1G74480.1 | 59.130 | 115 | 43 | 1 | 54 | 164 | 128 | 242 | 3.40e-43 | 146 |
| Msa0402540 | AT5G66990.1 | 50.746 | 134 | 59 | 2 | 42 | 170 | 142 | 273 | 8.21e-42 | 142 |
| Msa0402540 | AT5G53040.1 | 55.340 | 103 | 40 | 2 | 66 | 168 | 153 | 249 | 2.01e-31 | 115 |
| Msa0402540 | AT4G35590.2 | 37.313 | 134 | 72 | 2 | 61 | 187 | 192 | 320 | 1.99e-19 | 84.7 |
| Msa0402540 | AT4G35590.1 | 38.060 | 134 | 71 | 3 | 61 | 187 | 242 | 370 | 2.95e-19 | 84.7 |
Find 35 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTGTACATTCTTTATA+AGG | 0.172964 | 3_2:+30815117 | None:intergenic |
| AATTATTCAATGACAGACTA+TGG | 0.286299 | 3_2:-30815455 | None:intergenic |
| AACTTGATGAAAACACAAAA+AGG | 0.320323 | 3_2:-30814225 | Msa0402540:CDS |
| TCTCTAGCAGCTTGAGATAT+TGG | 0.323623 | 3_2:+30815230 | None:intergenic |
| AAGAAAAGGTGTAGGGATCT+TGG | 0.330015 | 3_2:-30815182 | Msa0402540:CDS |
| GCTCATGGTTATGAGGTTAA+TGG | 0.347444 | 3_2:-30814161 | Msa0402540:CDS |
| TACTTGTACATTCTTTATAA+GGG | 0.359802 | 3_2:+30815118 | None:intergenic |
| ACTTGATGCTGGAAATTATT+CGG | 0.365304 | 3_2:-30815393 | Msa0402540:CDS |
| TCAATGACAGACTATGGTTA+TGG | 0.408759 | 3_2:-30815449 | Msa0402540:CDS |
| GGCTTACACATTTGAAGAAA+AGG | 0.415724 | 3_2:-30815196 | Msa0402540:CDS |
| CATTCTTTATAAGGGTTTGA+AGG | 0.417292 | 3_2:+30815126 | None:intergenic |
| TATGAGGTTAATGGAACAAC+AGG | 0.443913 | 3_2:-30814152 | Msa0402540:CDS |
| CTGCTAGAGACCTTAATGTT+GGG | 0.489436 | 3_2:-30815217 | Msa0402540:CDS |
| GAAAGAAATGAAGAAGGTAG+AGG | 0.489935 | 3_2:-30814263 | Msa0402540:CDS |
| ATGAATGTGATGAGAAGATA+AGG | 0.493501 | 3_2:-30814306 | Msa0402540:CDS |
| GCTTAGACAAGCATGTTTCA+AGG | 0.494981 | 3_2:-30814203 | Msa0402540:CDS |
| ATTGCAGAAAGAAATGAAGA+AGG | 0.517898 | 3_2:-30814269 | Msa0402540:CDS |
| AGAGAAGGCTCATGGTTATG+AGG | 0.522137 | 3_2:-30814168 | Msa0402540:CDS |
| GCTGCTAGAGACCTTAATGT+TGG | 0.523622 | 3_2:-30815218 | Msa0402540:CDS |
| AATGTGTAAGCCCAACATTA+AGG | 0.530566 | 3_2:+30815207 | None:intergenic |
| ATGTGGAATGAACTTGATGC+TGG | 0.531093 | 3_2:-30815404 | Msa0402540:CDS |
| CACATTTGAAGAAAAGGTGT+AGG | 0.540159 | 3_2:-30815190 | Msa0402540:CDS |
| AGGCTCATTAATTTCCTATG+TGG | 0.543250 | 3_2:+30815146 | None:intergenic |
| GAATTCAAAGGTGGCCACAT+AGG | 0.544869 | 3_2:-30815160 | Msa0402540:CDS |
| TACTGGAGAAAATGTTGCAA+AGG | 0.556786 | 3_2:-30815342 | Msa0402540:CDS |
| AGGCTAATTACAAGAAGAGA+AGG | 0.568624 | 3_2:-30814183 | Msa0402540:CDS |
| TGTTGCAAAGGAAATTGTGA+AGG | 0.572064 | 3_2:-30815330 | Msa0402540:CDS |
| ACATTTGAAGAAAAGGTGTA+GGG | 0.575896 | 3_2:-30815189 | Msa0402540:CDS |
| TTATTGGTGGTGCAGGAGCA+AGG | 0.586089 | 3_2:-30814331 | Msa0402540:intron |
| TTACAAGAAGAGAAGGCTCA+TGG | 0.590126 | 3_2:-30814176 | Msa0402540:CDS |
| GTAGGGATCTTGGAATTCAA+AGG | 0.603743 | 3_2:-30815172 | Msa0402540:CDS |
| GTTGCAAAGGAAATTGTGAA+GGG | 0.628143 | 3_2:-30815329 | Msa0402540:CDS |
| GCATCAAGTTCATTCCACAT+TGG | 0.632758 | 3_2:+30815407 | None:intergenic |
| TGAGAAGATAAGGAATGCTG+TGG | 0.656309 | 3_2:-30814296 | Msa0402540:CDS |
| GGGATCTTGGAATTCAAAGG+TGG | 0.676630 | 3_2:-30815169 | Msa0402540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAACTCAAAAAATAT+GGG | + | chr3_2:30814439-30814458 | None:intergenic | 10.0% |
| !! | TATTAATAACTCAAAAAATA+TGG | + | chr3_2:30814440-30814459 | None:intergenic | 10.0% |
| !!! | ATATATTTTAGAAAAATATG+AGG | - | chr3_2:30814878-30814897 | Msa0402540:intron | 10.0% |
| !!! | TTTTATTTATTAATTATTGG+TGG | - | chr3_2:30815183-30815202 | Msa0402540:CDS | 10.0% |
| !! | ATTAATAACTCAAAAAATAT+GGG | + | chr3_2:30814439-30814458 | None:intergenic | 10.0% |
| !! | TATTAATAACTCAAAAAATA+TGG | + | chr3_2:30814440-30814459 | None:intergenic | 10.0% |
| !!! | ATATATTTTAGAAAAATATG+AGG | - | chr3_2:30814878-30814897 | Msa0402540:intron | 10.0% |
| !!! | TTTTATTTATTAATTATTGG+TGG | - | chr3_2:30815183-30815202 | Msa0402540:CDS | 10.0% |
| !!! | AAAAAGAAAATCATGATTTT+AGG | + | chr3_2:30814984-30815003 | None:intergenic | 15.0% |
| !!! | AAAAAGAAAATCATGATTTT+AGG | + | chr3_2:30814984-30815003 | None:intergenic | 15.0% |
| !! | TACTTGTACATTCTTTATAA+GGG | + | chr3_2:30814412-30814431 | None:intergenic | 20.0% |
| !! | TTACTTGTACATTCTTTATA+AGG | + | chr3_2:30814413-30814432 | None:intergenic | 20.0% |
| !! | TGTTAAAAGTTATAGCAAAA+AGG | - | chr3_2:30814840-30814859 | Msa0402540:intron | 20.0% |
| !!! | TAGGTTAATTTTCACTATAA+GGG | + | chr3_2:30814904-30814923 | None:intergenic | 20.0% |
| !!! | TTAGGTTAATTTTCACTATA+AGG | + | chr3_2:30814905-30814924 | None:intergenic | 20.0% |
| !!! | GGAATTGAAAAATCAATTTT+AGG | + | chr3_2:30814923-30814942 | None:intergenic | 20.0% |
| !!! | CTTTTTCTTACTAATTTTTG+TGG | - | chr3_2:30814998-30815017 | Msa0402540:intron | 20.0% |
| !! | TACTTGTACATTCTTTATAA+GGG | + | chr3_2:30814412-30814431 | None:intergenic | 20.0% |
| !! | TTACTTGTACATTCTTTATA+AGG | + | chr3_2:30814413-30814432 | None:intergenic | 20.0% |
| !! | TGTTAAAAGTTATAGCAAAA+AGG | - | chr3_2:30814840-30814859 | Msa0402540:intron | 20.0% |
| !!! | TAGGTTAATTTTCACTATAA+GGG | + | chr3_2:30814904-30814923 | None:intergenic | 20.0% |
| !!! | TTAGGTTAATTTTCACTATA+AGG | + | chr3_2:30814905-30814924 | None:intergenic | 20.0% |
| !!! | GGAATTGAAAAATCAATTTT+AGG | + | chr3_2:30814923-30814942 | None:intergenic | 20.0% |
| !!! | CTTTTTCTTACTAATTTTTG+TGG | - | chr3_2:30814998-30815017 | Msa0402540:intron | 20.0% |
| !!! | TGTAGTGAATTGTTTTAATG+TGG | - | chr3_2:30815044-30815063 | Msa0402540:intron | 25.0% |
| ! | AACTTGATGAAAACACAAAA+AGG | - | chr3_2:30815302-30815321 | Msa0402540:CDS | 25.0% |
| !!! | TGTAGTGAATTGTTTTAATG+TGG | - | chr3_2:30815044-30815063 | Msa0402540:intron | 25.0% |
| ! | AACTTGATGAAAACACAAAA+AGG | - | chr3_2:30815302-30815321 | Msa0402540:CDS | 25.0% |
| ! | TTATGGTGATGCTAAAAATG+TGG | - | chr3_2:30814095-30814114 | Msa0402540:CDS | 30.0% |
| ACTTGATGCTGGAAATTATT+CGG | - | chr3_2:30814134-30814153 | Msa0402540:CDS | 30.0% | |
| ! | TTTTCGATTAGCAACATTAC+TGG | - | chr3_2:30814168-30814187 | Msa0402540:CDS | 30.0% |
| ! | ACATTTGAAGAAAAGGTGTA+GGG | - | chr3_2:30814338-30814357 | Msa0402540:intron | 30.0% |
| CATTCTTTATAAGGGTTTGA+AGG | + | chr3_2:30814404-30814423 | None:intergenic | 30.0% | |
| !!! | CACAATGTGATTTTTTGGTT+TGG | + | chr3_2:30814528-30814547 | None:intergenic | 30.0% |
| !!! | CACTACACAATGTGATTTTT+TGG | + | chr3_2:30814533-30814552 | None:intergenic | 30.0% |
| AAAAATCACATTGTGTAGTG+AGG | - | chr3_2:30814533-30814552 | Msa0402540:intron | 30.0% | |
| ATGTTTGCGCAAGTAAATTA+TGG | + | chr3_2:30815094-30815113 | None:intergenic | 30.0% | |
| !! | TTATTAATTATTGGTGGTGC+AGG | - | chr3_2:30815189-30815208 | Msa0402540:CDS | 30.0% |
| ATGAATGTGATGAGAAGATA+AGG | - | chr3_2:30815221-30815240 | Msa0402540:CDS | 30.0% | |
| ATTGCAGAAAGAAATGAAGA+AGG | - | chr3_2:30815258-30815277 | Msa0402540:CDS | 30.0% | |
| !! | TTTTCATCAAGTTGCAAATC+TGG | + | chr3_2:30815295-30815314 | None:intergenic | 30.0% |
| ! | TTATGGTGATGCTAAAAATG+TGG | - | chr3_2:30814095-30814114 | Msa0402540:CDS | 30.0% |
| ACTTGATGCTGGAAATTATT+CGG | - | chr3_2:30814134-30814153 | Msa0402540:CDS | 30.0% | |
| ! | TTTTCGATTAGCAACATTAC+TGG | - | chr3_2:30814168-30814187 | Msa0402540:CDS | 30.0% |
| ! | ACATTTGAAGAAAAGGTGTA+GGG | - | chr3_2:30814338-30814357 | Msa0402540:intron | 30.0% |
| CATTCTTTATAAGGGTTTGA+AGG | + | chr3_2:30814404-30814423 | None:intergenic | 30.0% | |
| !!! | CACAATGTGATTTTTTGGTT+TGG | + | chr3_2:30814528-30814547 | None:intergenic | 30.0% |
| !!! | CACTACACAATGTGATTTTT+TGG | + | chr3_2:30814533-30814552 | None:intergenic | 30.0% |
| AAAAATCACATTGTGTAGTG+AGG | - | chr3_2:30814533-30814552 | Msa0402540:intron | 30.0% | |
| ATGTTTGCGCAAGTAAATTA+TGG | + | chr3_2:30815094-30815113 | None:intergenic | 30.0% | |
| !! | TTATTAATTATTGGTGGTGC+AGG | - | chr3_2:30815189-30815208 | Msa0402540:CDS | 30.0% |
| ATGAATGTGATGAGAAGATA+AGG | - | chr3_2:30815221-30815240 | Msa0402540:CDS | 30.0% | |
| ATTGCAGAAAGAAATGAAGA+AGG | - | chr3_2:30815258-30815277 | Msa0402540:CDS | 30.0% | |
| !! | TTTTCATCAAGTTGCAAATC+TGG | + | chr3_2:30815295-30815314 | None:intergenic | 30.0% |
| CTAAAAATGTGGTTCCAATG+TGG | - | chr3_2:30814106-30814125 | Msa0402540:CDS | 35.0% | |
| TACTGGAGAAAATGTTGCAA+AGG | - | chr3_2:30814185-30814204 | Msa0402540:CDS | 35.0% | |
| TGTTGCAAAGGAAATTGTGA+AGG | - | chr3_2:30814197-30814216 | Msa0402540:CDS | 35.0% | |
| GTTGCAAAGGAAATTGTGAA+GGG | - | chr3_2:30814198-30814217 | Msa0402540:CDS | 35.0% | |
| AATGTGTAAGCCCAACATTA+AGG | + | chr3_2:30814323-30814342 | None:intergenic | 35.0% | |
| GGCTTACACATTTGAAGAAA+AGG | - | chr3_2:30814331-30814350 | Msa0402540:intron | 35.0% | |
| ! | CACATTTGAAGAAAAGGTGT+AGG | - | chr3_2:30814337-30814356 | Msa0402540:intron | 35.0% |
| AGGCTCATTAATTTCCTATG+TGG | + | chr3_2:30814384-30814403 | None:intergenic | 35.0% | |
| CAAGTCGCAAAATTTAGAGA+TGG | + | chr3_2:30814944-30814963 | None:intergenic | 35.0% | |
| ! | CATCTCTAAATTTTGCGACT+TGG | - | chr3_2:30814942-30814961 | Msa0402540:intron | 35.0% |
| !!! | AAATTTTGCGACTTGGTAAG+CGG | - | chr3_2:30814949-30814968 | Msa0402540:intron | 35.0% |
| GAAAGAAATGAAGAAGGTAG+AGG | - | chr3_2:30815264-30815283 | Msa0402540:CDS | 35.0% | |
| AGGCTAATTACAAGAAGAGA+AGG | - | chr3_2:30815344-30815363 | Msa0402540:CDS | 35.0% | |
| TATGAGGTTAATGGAACAAC+AGG | - | chr3_2:30815375-30815394 | Msa0402540:CDS | 35.0% | |
| CTAAAAATGTGGTTCCAATG+TGG | - | chr3_2:30814106-30814125 | Msa0402540:CDS | 35.0% | |
| TACTGGAGAAAATGTTGCAA+AGG | - | chr3_2:30814185-30814204 | Msa0402540:CDS | 35.0% | |
| TGTTGCAAAGGAAATTGTGA+AGG | - | chr3_2:30814197-30814216 | Msa0402540:CDS | 35.0% | |
| GTTGCAAAGGAAATTGTGAA+GGG | - | chr3_2:30814198-30814217 | Msa0402540:CDS | 35.0% | |
| AATGTGTAAGCCCAACATTA+AGG | + | chr3_2:30814323-30814342 | None:intergenic | 35.0% | |
| GGCTTACACATTTGAAGAAA+AGG | - | chr3_2:30814331-30814350 | Msa0402540:intron | 35.0% | |
| ! | CACATTTGAAGAAAAGGTGT+AGG | - | chr3_2:30814337-30814356 | Msa0402540:intron | 35.0% |
| AGGCTCATTAATTTCCTATG+TGG | + | chr3_2:30814384-30814403 | None:intergenic | 35.0% | |
| CAAGTCGCAAAATTTAGAGA+TGG | + | chr3_2:30814944-30814963 | None:intergenic | 35.0% | |
| ! | CATCTCTAAATTTTGCGACT+TGG | - | chr3_2:30814942-30814961 | Msa0402540:intron | 35.0% |
| !!! | AAATTTTGCGACTTGGTAAG+CGG | - | chr3_2:30814949-30814968 | Msa0402540:intron | 35.0% |
| GAAAGAAATGAAGAAGGTAG+AGG | - | chr3_2:30815264-30815283 | Msa0402540:CDS | 35.0% | |
| AGGCTAATTACAAGAAGAGA+AGG | - | chr3_2:30815344-30815363 | Msa0402540:CDS | 35.0% | |
| TATGAGGTTAATGGAACAAC+AGG | - | chr3_2:30815375-30815394 | Msa0402540:CDS | 35.0% | |
| GCATCAAGTTCATTCCACAT+TGG | + | chr3_2:30814123-30814142 | None:intergenic | 40.0% | |
| ATGTGGAATGAACTTGATGC+TGG | - | chr3_2:30814123-30814142 | Msa0402540:CDS | 40.0% | |
| TCTCTAGCAGCTTGAGATAT+TGG | + | chr3_2:30814300-30814319 | None:intergenic | 40.0% | |
| CTGCTAGAGACCTTAATGTT+GGG | - | chr3_2:30814310-30814329 | Msa0402540:CDS | 40.0% | |
| ! | AAGAAAAGGTGTAGGGATCT+TGG | - | chr3_2:30814345-30814364 | Msa0402540:intron | 40.0% |
| GTAGGGATCTTGGAATTCAA+AGG | - | chr3_2:30814355-30814374 | Msa0402540:intron | 40.0% | |
| ATTGTGTAGTGAGGAGATCT+AGG | - | chr3_2:30814542-30814561 | Msa0402540:intron | 40.0% | |
| TTGTGTAGTGAGGAGATCTA+GGG | - | chr3_2:30814543-30814562 | Msa0402540:intron | 40.0% | |
| TGAGAAGATAAGGAATGCTG+TGG | - | chr3_2:30815231-30815250 | Msa0402540:CDS | 40.0% | |
| GCTTAGACAAGCATGTTTCA+AGG | - | chr3_2:30815324-30815343 | Msa0402540:CDS | 40.0% | |
| TTACAAGAAGAGAAGGCTCA+TGG | - | chr3_2:30815351-30815370 | Msa0402540:CDS | 40.0% | |
| GCTCATGGTTATGAGGTTAA+TGG | - | chr3_2:30815366-30815385 | Msa0402540:CDS | 40.0% | |
| GCATCAAGTTCATTCCACAT+TGG | + | chr3_2:30814123-30814142 | None:intergenic | 40.0% | |
| ATGTGGAATGAACTTGATGC+TGG | - | chr3_2:30814123-30814142 | Msa0402540:CDS | 40.0% | |
| TCTCTAGCAGCTTGAGATAT+TGG | + | chr3_2:30814300-30814319 | None:intergenic | 40.0% | |
| CTGCTAGAGACCTTAATGTT+GGG | - | chr3_2:30814310-30814329 | Msa0402540:CDS | 40.0% | |
| ! | AAGAAAAGGTGTAGGGATCT+TGG | - | chr3_2:30814345-30814364 | Msa0402540:intron | 40.0% |
| GTAGGGATCTTGGAATTCAA+AGG | - | chr3_2:30814355-30814374 | Msa0402540:intron | 40.0% | |
| ATTGTGTAGTGAGGAGATCT+AGG | - | chr3_2:30814542-30814561 | Msa0402540:intron | 40.0% | |
| TTGTGTAGTGAGGAGATCTA+GGG | - | chr3_2:30814543-30814562 | Msa0402540:intron | 40.0% | |
| TGAGAAGATAAGGAATGCTG+TGG | - | chr3_2:30815231-30815250 | Msa0402540:CDS | 40.0% | |
| GCTTAGACAAGCATGTTTCA+AGG | - | chr3_2:30815324-30815343 | Msa0402540:CDS | 40.0% | |
| TTACAAGAAGAGAAGGCTCA+TGG | - | chr3_2:30815351-30815370 | Msa0402540:CDS | 40.0% | |
| GCTCATGGTTATGAGGTTAA+TGG | - | chr3_2:30815366-30815385 | Msa0402540:CDS | 40.0% | |
| GCTGCTAGAGACCTTAATGT+TGG | - | chr3_2:30814309-30814328 | Msa0402540:CDS | 45.0% | |
| GGGATCTTGGAATTCAAAGG+TGG | - | chr3_2:30814358-30814377 | Msa0402540:intron | 45.0% | |
| GAATTCAAAGGTGGCCACAT+AGG | - | chr3_2:30814367-30814386 | Msa0402540:intron | 45.0% | |
| AGAGAAGGCTCATGGTTATG+AGG | - | chr3_2:30815359-30815378 | Msa0402540:CDS | 45.0% | |
| GCTGCTAGAGACCTTAATGT+TGG | - | chr3_2:30814309-30814328 | Msa0402540:CDS | 45.0% | |
| GGGATCTTGGAATTCAAAGG+TGG | - | chr3_2:30814358-30814377 | Msa0402540:intron | 45.0% | |
| GAATTCAAAGGTGGCCACAT+AGG | - | chr3_2:30814367-30814386 | Msa0402540:intron | 45.0% | |
| AGAGAAGGCTCATGGTTATG+AGG | - | chr3_2:30815359-30815378 | Msa0402540:CDS | 45.0% | |
| !!! | ACATTTTATTTATTAATTAT+TGG | - | chr3_2:30815180-30815199 | Msa0402540:CDS | 5.0% |
| !!! | ACATTTTATTTATTAATTAT+TGG | - | chr3_2:30815180-30815199 | Msa0402540:CDS | 5.0% |
| !! | TTATTGGTGGTGCAGGAGCA+AGG | - | chr3_2:30815196-30815215 | Msa0402540:CDS | 50.0% |
| !! | TTATTGGTGGTGCAGGAGCA+AGG | - | chr3_2:30815196-30815215 | Msa0402540:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 30814081 | 30815468 | 30814081 | ID=Msa0402540;Name=Msa0402540 |
| chr3_2 | mRNA | 30814081 | 30815468 | 30814081 | ID=Msa0402540-mRNA-1;Parent=Msa0402540;Name=Msa0402540-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|201 |
| chr3_2 | exon | 30815121 | 30815468 | 30815121 | ID=Msa0402540-mRNA-1:exon:6164;Parent=Msa0402540-mRNA-1 |
| chr3_2 | exon | 30814081 | 30814338 | 30814081 | ID=Msa0402540-mRNA-1:exon:6163;Parent=Msa0402540-mRNA-1 |
| chr3_2 | CDS | 30815121 | 30815468 | 30815121 | ID=Msa0402540-mRNA-1:cds;Parent=Msa0402540-mRNA-1 |
| chr3_2 | CDS | 30814081 | 30814338 | 30814081 | ID=Msa0402540-mRNA-1:cds;Parent=Msa0402540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
