Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403180 | XP_039683937.1 | 49.495 | 198 | 63 | 6 | 365 | 542 | 976 | 1156 | 2.58e-40 | 169 |
| Msa0403180 | XP_039683937.1 | 69.635 | 438 | 58 | 4 | 2 | 364 | 422 | 859 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403180 | sp|Q9SZL8|FRS5_ARATH | 35.412 | 449 | 201 | 12 | 2 | 364 | 73 | 518 | 4.44e-77 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403180 | Q2HSZ7 | 49.495 | 198 | 63 | 6 | 365 | 542 | 906 | 1086 | 1.67e-40 | 168 |
| Msa0403180 | Q2HSZ7 | 69.635 | 438 | 58 | 4 | 2 | 364 | 352 | 789 | 0.0 | 628 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0403180 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403180 | MtrunA17_Chr2g0296781 | 69.444 | 432 | 57 | 4 | 8 | 364 | 3 | 434 | 0.0 | 613 |
| Msa0403180 | MtrunA17_Chr2g0296781 | 53.614 | 166 | 56 | 4 | 365 | 510 | 551 | 715 | 2.82e-40 | 155 |
| Msa0403180 | MtrunA17_Chr6g0477261 | 78.370 | 319 | 36 | 3 | 79 | 364 | 5 | 323 | 0.0 | 525 |
| Msa0403180 | MtrunA17_Chr6g0477261 | 51.220 | 205 | 69 | 6 | 365 | 539 | 440 | 643 | 1.80e-46 | 172 |
| Msa0403180 | MtrunA17_Chr1g0196541 | 58.796 | 432 | 103 | 4 | 8 | 364 | 3 | 434 | 6.84e-176 | 514 |
| Msa0403180 | MtrunA17_Chr1g0196541 | 45.860 | 157 | 65 | 4 | 354 | 496 | 540 | 690 | 3.06e-29 | 122 |
| Msa0403180 | MtrunA17_Chr5g0441581 | 47.100 | 431 | 160 | 5 | 2 | 364 | 32 | 462 | 1.80e-127 | 388 |
| Msa0403180 | MtrunA17_Chr5g0448761 | 36.947 | 452 | 194 | 12 | 2 | 364 | 60 | 509 | 4.59e-82 | 272 |
| Msa0403180 | MtrunA17_Chr1g0202341 | 35.491 | 448 | 199 | 10 | 2 | 364 | 51 | 493 | 2.06e-80 | 265 |
| Msa0403180 | MtrunA17_Chr2g0291581 | 35.446 | 426 | 208 | 9 | 2 | 361 | 71 | 495 | 6.64e-76 | 253 |
| Msa0403180 | MtrunA17_Chr3g0080351 | 34.633 | 436 | 212 | 10 | 2 | 367 | 76 | 508 | 3.06e-72 | 246 |
| Msa0403180 | MtrunA17_Chr1g0207551 | 33.636 | 440 | 214 | 8 | 2 | 363 | 34 | 473 | 4.01e-72 | 246 |
| Msa0403180 | MtrunA17_Chr2g0329031 | 34.732 | 429 | 205 | 10 | 8 | 363 | 20 | 446 | 1.43e-71 | 243 |
| Msa0403180 | MtrunA17_Chr2g0291591 | 33.333 | 441 | 213 | 10 | 2 | 364 | 64 | 501 | 6.06e-67 | 226 |
| Msa0403180 | MtrunA17_Chr5g0448511 | 37.943 | 282 | 140 | 4 | 117 | 364 | 1 | 281 | 3.71e-60 | 208 |
| Msa0403180 | MtrunA17_Chr5g0440451 | 41.481 | 270 | 122 | 6 | 129 | 364 | 221 | 488 | 8.85e-60 | 213 |
| Msa0403180 | MtrunA17_Chr3g0118611 | 41.852 | 270 | 121 | 6 | 129 | 364 | 118 | 385 | 1.33e-59 | 211 |
| Msa0403180 | MtrunA17_Chr2g0287651 | 31.761 | 318 | 185 | 5 | 73 | 361 | 198 | 512 | 2.94e-51 | 188 |
| Msa0403180 | MtrunA17_Chr8g0363841 | 35.689 | 283 | 149 | 3 | 99 | 348 | 161 | 443 | 1.57e-50 | 184 |
| Msa0403180 | MtrunA17_Chr2g0324011 | 27.918 | 437 | 227 | 9 | 2 | 354 | 10 | 442 | 2.99e-50 | 182 |
| Msa0403180 | MtrunA17_Chr1g0198761 | 35.738 | 305 | 154 | 9 | 81 | 347 | 183 | 483 | 2.36e-49 | 182 |
| Msa0403180 | MtrunA17_Chr1g0203051 | 33.225 | 307 | 174 | 6 | 84 | 361 | 210 | 514 | 1.33e-46 | 172 |
| Msa0403180 | MtrunA17_Chr2g0287061 | 32.542 | 421 | 205 | 11 | 2 | 363 | 183 | 583 | 2.30e-46 | 174 |
| Msa0403180 | MtrunA17_Chr3g0082121 | 29.759 | 457 | 239 | 15 | 1 | 379 | 42 | 494 | 1.63e-44 | 167 |
| Msa0403180 | MtrunA17_Chr5g0431001 | 34.932 | 292 | 144 | 8 | 81 | 332 | 197 | 482 | 1.69e-44 | 164 |
| Msa0403180 | MtrunA17_Chr6g0476441 | 44.292 | 219 | 71 | 5 | 365 | 533 | 56 | 273 | 8.52e-44 | 157 |
| Msa0403180 | MtrunA17_Chr2g0276841 | 26.039 | 457 | 225 | 15 | 1 | 356 | 69 | 513 | 2.29e-40 | 155 |
| Msa0403180 | MtrunA17_Chr6g0458391 | 24.764 | 424 | 256 | 8 | 1 | 361 | 224 | 647 | 7.07e-37 | 145 |
| Msa0403180 | MtrunA17_Chr1g0203721 | 26.577 | 444 | 223 | 13 | 4 | 354 | 65 | 498 | 5.58e-36 | 143 |
| Msa0403180 | MtrunA17_Chr2g0294841 | 25.694 | 432 | 230 | 12 | 1 | 342 | 44 | 474 | 4.84e-35 | 140 |
| Msa0403180 | MtrunA17_Chr1g0164591 | 33.948 | 271 | 134 | 7 | 87 | 314 | 40 | 308 | 5.06e-35 | 134 |
| Msa0403180 | MtrunA17_Chr2g0290391 | 24.374 | 439 | 230 | 15 | 2 | 342 | 51 | 485 | 2.23e-28 | 119 |
| Msa0403180 | MtrunA17_Chr7g0258861 | 28.929 | 280 | 141 | 10 | 2 | 223 | 10 | 289 | 3.54e-26 | 108 |
| Msa0403180 | MtrunA17_Chr6g0476431 | 64.789 | 71 | 25 | 0 | 8 | 78 | 3 | 73 | 6.13e-26 | 101 |
| Msa0403180 | MtrunA17_Chr3g0077731 | 45.370 | 108 | 38 | 4 | 423 | 510 | 1 | 107 | 6.18e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403180 | AT4G38180.1 | 35.412 | 449 | 201 | 12 | 2 | 364 | 73 | 518 | 4.51e-78 | 261 |
| Msa0403180 | AT4G15090.1 | 33.787 | 441 | 211 | 11 | 2 | 361 | 51 | 491 | 4.07e-72 | 246 |
| Msa0403180 | AT4G15090.5 | 33.787 | 441 | 211 | 11 | 2 | 361 | 51 | 491 | 4.07e-72 | 246 |
| Msa0403180 | AT4G15090.3 | 33.787 | 441 | 211 | 11 | 2 | 361 | 51 | 491 | 4.07e-72 | 246 |
| Msa0403180 | AT4G15090.2 | 33.787 | 441 | 211 | 11 | 2 | 361 | 51 | 491 | 4.07e-72 | 246 |
| Msa0403180 | AT4G15090.4 | 33.787 | 441 | 211 | 11 | 2 | 361 | 51 | 491 | 4.07e-72 | 246 |
| Msa0403180 | AT1G76320.3 | 34.884 | 430 | 204 | 10 | 8 | 363 | 3 | 430 | 1.85e-67 | 231 |
| Msa0403180 | AT1G76320.2 | 34.884 | 430 | 204 | 10 | 8 | 363 | 3 | 430 | 3.92e-67 | 231 |
| Msa0403180 | AT1G76320.1 | 34.884 | 430 | 204 | 10 | 8 | 363 | 3 | 430 | 4.26e-67 | 231 |
| Msa0403180 | AT1G76320.4 | 34.884 | 430 | 204 | 10 | 8 | 363 | 3 | 430 | 4.26e-67 | 231 |
| Msa0403180 | AT1G52520.1 | 31.713 | 432 | 218 | 11 | 2 | 361 | 85 | 511 | 1.01e-64 | 224 |
| Msa0403180 | AT3G22170.2 | 31.542 | 428 | 222 | 11 | 2 | 358 | 70 | 497 | 3.98e-64 | 224 |
| Msa0403180 | AT3G22170.1 | 31.542 | 428 | 222 | 11 | 2 | 358 | 70 | 497 | 3.98e-64 | 224 |
| Msa0403180 | AT2G27110.2 | 32.235 | 425 | 216 | 10 | 2 | 364 | 49 | 463 | 1.72e-60 | 214 |
| Msa0403180 | AT2G27110.1 | 32.235 | 425 | 216 | 10 | 2 | 364 | 49 | 463 | 1.72e-60 | 214 |
| Msa0403180 | AT2G32250.5 | 34.343 | 396 | 216 | 9 | 5 | 359 | 41 | 433 | 2.36e-60 | 213 |
| Msa0403180 | AT2G32250.6 | 34.343 | 396 | 216 | 9 | 5 | 359 | 41 | 433 | 4.53e-60 | 213 |
| Msa0403180 | AT2G32250.1 | 34.343 | 396 | 216 | 9 | 5 | 359 | 41 | 433 | 4.53e-60 | 213 |
| Msa0403180 | AT2G32250.3 | 34.343 | 396 | 216 | 9 | 5 | 359 | 41 | 433 | 4.53e-60 | 213 |
| Msa0403180 | AT2G32250.2 | 34.343 | 396 | 216 | 9 | 5 | 359 | 41 | 433 | 4.80e-60 | 213 |
| Msa0403180 | AT2G32250.4 | 34.343 | 396 | 216 | 9 | 5 | 359 | 41 | 433 | 4.80e-60 | 213 |
| Msa0403180 | AT2G32250.8 | 34.351 | 393 | 214 | 9 | 8 | 359 | 3 | 392 | 7.53e-60 | 211 |
| Msa0403180 | AT2G32250.7 | 34.351 | 393 | 214 | 9 | 8 | 359 | 3 | 392 | 8.36e-60 | 211 |
| Msa0403180 | AT4G19990.3 | 34.889 | 407 | 198 | 12 | 5 | 348 | 24 | 426 | 5.07e-59 | 209 |
| Msa0403180 | AT4G19990.4 | 34.889 | 407 | 198 | 12 | 5 | 348 | 24 | 426 | 5.07e-59 | 209 |
| Msa0403180 | AT4G19990.5 | 34.889 | 407 | 198 | 12 | 5 | 348 | 24 | 426 | 6.24e-59 | 209 |
| Msa0403180 | AT4G19990.6 | 33.902 | 410 | 198 | 11 | 5 | 348 | 24 | 426 | 6.48e-59 | 209 |
| Msa0403180 | AT4G19990.2 | 33.902 | 410 | 198 | 11 | 5 | 348 | 24 | 426 | 6.48e-59 | 209 |
| Msa0403180 | AT4G19990.7 | 34.146 | 410 | 197 | 11 | 5 | 348 | 38 | 440 | 7.57e-59 | 209 |
| Msa0403180 | AT2G27110.3 | 36.190 | 315 | 157 | 5 | 84 | 364 | 14 | 318 | 9.26e-58 | 205 |
| Msa0403180 | AT1G80010.1 | 30.631 | 444 | 217 | 14 | 2 | 358 | 95 | 534 | 3.32e-57 | 204 |
| Msa0403180 | AT4G19990.1 | 37.828 | 267 | 131 | 3 | 117 | 348 | 103 | 369 | 7.73e-54 | 194 |
| Msa0403180 | AT4G38170.1 | 36.264 | 273 | 139 | 6 | 125 | 364 | 13 | 283 | 4.85e-51 | 183 |
| Msa0403180 | AT3G06250.2 | 30.123 | 405 | 233 | 11 | 2 | 363 | 190 | 587 | 8.45e-48 | 177 |
| Msa0403180 | AT3G06250.1 | 30.123 | 405 | 233 | 11 | 2 | 363 | 190 | 587 | 8.45e-48 | 177 |
| Msa0403180 | AT3G06250.3 | 30.123 | 405 | 233 | 11 | 2 | 363 | 190 | 587 | 8.45e-48 | 177 |
| Msa0403180 | AT5G18960.2 | 30.751 | 413 | 223 | 13 | 2 | 363 | 211 | 611 | 6.58e-47 | 175 |
| Msa0403180 | AT5G18960.1 | 30.751 | 413 | 223 | 13 | 2 | 363 | 211 | 611 | 6.58e-47 | 175 |
| Msa0403180 | AT1G10240.2 | 26.247 | 461 | 223 | 17 | 1 | 356 | 47 | 495 | 9.26e-38 | 148 |
| Msa0403180 | AT1G10240.1 | 26.247 | 461 | 223 | 17 | 1 | 356 | 47 | 495 | 9.26e-38 | 148 |
| Msa0403180 | AT5G28530.3 | 26.457 | 446 | 220 | 14 | 2 | 346 | 55 | 493 | 2.22e-32 | 132 |
| Msa0403180 | AT5G28530.2 | 26.457 | 446 | 220 | 14 | 2 | 346 | 55 | 493 | 2.22e-32 | 132 |
| Msa0403180 | AT5G28530.1 | 26.471 | 442 | 217 | 14 | 2 | 342 | 55 | 489 | 2.52e-32 | 132 |
| Msa0403180 | AT5G28530.5 | 24.178 | 426 | 192 | 16 | 2 | 346 | 55 | 430 | 2.35e-17 | 85.9 |
| Msa0403180 | AT5G28530.4 | 23.460 | 422 | 192 | 15 | 2 | 342 | 55 | 426 | 4.02e-17 | 85.1 |
Find 80 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTTCTTCTATAATTTC+AGG | 0.175398 | 3_2:-32689821 | None:intergenic |
| CATATGTGAGAGACACATTT+TGG | 0.184902 | 3_2:+32689081 | Msa0403180:CDS |
| TCACTCATAAGTATTGAATT+TGG | 0.202186 | 3_2:-32690313 | None:intergenic |
| GTCGTTTAAGAAATGTATTT+TGG | 0.215986 | 3_2:+32688544 | Msa0403180:CDS |
| AAGGAAAACATGGCTGATTT+TGG | 0.228183 | 3_2:+32689230 | Msa0403180:CDS |
| CACCATCGATGGCGAGCTTT+TGG | 0.238537 | 3_2:-32688849 | None:intergenic |
| CCTTTACTTCGAGTCGGTAC+TGG | 0.285603 | 3_2:-32689878 | None:intergenic |
| CGTAGAAGCAACTTCGTAAA+AGG | 0.287052 | 3_2:-32689714 | None:intergenic |
| TATCAAAACCACATTTAATC+AGG | 0.290721 | 3_2:-32689643 | None:intergenic |
| TATGCCCGGTCTATAGGTTT+TGG | 0.300318 | 3_2:+32688009 | Msa0403180:CDS |
| TGATCAGTTATTATGGCATT+TGG | 0.323265 | 3_2:-32688789 | None:intergenic |
| AGGGCTGCATATGAATATTT+TGG | 0.330794 | 3_2:+32688582 | Msa0403180:CDS |
| AAGTGCGGAGACTGCGACTT+GGG | 0.331491 | 3_2:+32688430 | Msa0403180:CDS |
| CGCAGTGGAGGAAGGATATA+AGG | 0.337986 | 3_2:+32689609 | Msa0403180:intron |
| TTTGTGGCATATAATGAAAA+AGG | 0.344495 | 3_2:+32688872 | Msa0403180:CDS |
| AGTATGAACTCATTCTTTGA+TGG | 0.348820 | 3_2:+32689134 | Msa0403180:CDS |
| ATTGTCTTGATCAGTTATTA+TGG | 0.355900 | 3_2:-32688796 | None:intergenic |
| AAGAGTTATGCCCGGTCTAT+AGG | 0.361091 | 3_2:+32688003 | Msa0403180:CDS |
| ACTTATGAGTGAAGTATATC+AGG | 0.377433 | 3_2:+32690324 | Msa0403180:CDS |
| AAGGGCATCCTCCTTCAAAA+AGG | 0.389803 | 3_2:+32689897 | Msa0403180:CDS |
| CATCTTCTTCTATAATTTCA+GGG | 0.405722 | 3_2:-32689820 | None:intergenic |
| GAATATGACATTTGGTGAAA+AGG | 0.417591 | 3_2:+32688386 | Msa0403180:CDS |
| CATTTGGTGAAAAGGATTGT+AGG | 0.444493 | 3_2:+32688394 | Msa0403180:CDS |
| AAGTATTGAATTTGGATTGA+AGG | 0.452798 | 3_2:-32690305 | None:intergenic |
| CTCGCCATCGATGGTGTTTG+TGG | 0.452930 | 3_2:+32688856 | Msa0403180:CDS |
| ATTTGATGAAAGAAATCGTT+GGG | 0.454237 | 3_2:+32689052 | Msa0403180:CDS |
| CTTTACTTCGAGTCGGTACT+GGG | 0.454621 | 3_2:-32689877 | None:intergenic |
| CCATGGTCAATCTGTGTTGT+TGG | 0.460551 | 3_2:+32688683 | Msa0403180:CDS |
| CATGGTCAATCTGTGTTGTT+GGG | 0.466450 | 3_2:+32688684 | Msa0403180:CDS |
| ACTCCAACAAAAGGAGCAAA+TGG | 0.472118 | 3_2:-32688654 | None:intergenic |
| TTTGGGCAGATGCGAGATGT+AGG | 0.483477 | 3_2:+32688562 | Msa0403180:CDS |
| AGTATTGAATTTGGATTGAA+GGG | 0.484124 | 3_2:-32690304 | None:intergenic |
| TTGGCTGTTCACAACATGGT+TGG | 0.487761 | 3_2:+32688746 | Msa0403180:CDS |
| CCTGAAATTATAGAAGAAGA+TGG | 0.488011 | 3_2:+32689821 | Msa0403180:CDS |
| CTAAATATAGTTCCAACCTT+AGG | 0.488331 | 3_2:-32687952 | None:intergenic |
| CGGAGACTGCGACTTGGGGT+TGG | 0.494185 | 3_2:+32688435 | Msa0403180:CDS |
| GTTCAAGTAGTTGATAAAGT+TGG | 0.495312 | 3_2:+32690116 | Msa0403180:CDS |
| CAGTACCGACTCGAAGTAAA+GGG | 0.498689 | 3_2:+32689879 | Msa0403180:CDS |
| CTATAGTTGTTGAAGCGAAT+GGG | 0.503159 | 3_2:+32688358 | Msa0403180:CDS |
| CCAGTACCGACTCGAAGTAA+AGG | 0.505501 | 3_2:+32689878 | Msa0403180:CDS |
| TCTATAGTTGTTGAAGCGAA+TGG | 0.507984 | 3_2:+32688357 | Msa0403180:CDS |
| AATGTGTCTCTCACATATGC+AGG | 0.509862 | 3_2:-32689077 | None:intergenic |
| CATTCAATCTAGCCTTGCAC+TGG | 0.510411 | 3_2:-32688158 | None:intergenic |
| TGGTGATTTACTCCAACAAA+AGG | 0.525957 | 3_2:-32688663 | None:intergenic |
| TCAGGATAACGAATGGTTGA+AGG | 0.526171 | 3_2:+32689025 | Msa0403180:intron |
| GGGTATGAGAATATGACATT+TGG | 0.528947 | 3_2:+32688378 | Msa0403180:CDS |
| AAAGATGAAATGCCTAAGGT+TGG | 0.530444 | 3_2:+32687940 | None:intergenic |
| TTCCAAAAGCTCGCCATCGA+TGG | 0.531681 | 3_2:+32688847 | Msa0403180:CDS |
| TTGGGCAGATGCGAGATGTA+GGG | 0.538615 | 3_2:+32688563 | Msa0403180:CDS |
| TGTTGTGAACAGCCAAGTAA+AGG | 0.547394 | 3_2:-32688739 | None:intergenic |
| TAACTCCAAAACCTATAGAC+CGG | 0.548272 | 3_2:-32688014 | None:intergenic |
| AGGATACTAAGACCTTTACT+TGG | 0.548532 | 3_2:+32688727 | Msa0403180:CDS |
| CAGGATAACGAATGGTTGAA+GGG | 0.548682 | 3_2:+32689026 | Msa0403180:intron |
| ATCAAAACCACATTTAATCA+GGG | 0.552351 | 3_2:-32689642 | None:intergenic |
| TTACTTGGCTGTTCACAACA+TGG | 0.555090 | 3_2:+32688742 | Msa0403180:CDS |
| TTCAGGGCATGTTTCTTGAG+AGG | 0.556231 | 3_2:-32689804 | None:intergenic |
| ATTGAAAGATAAAGTTGAGA+AGG | 0.561801 | 3_2:+32689211 | Msa0403180:CDS |
| TTAGAACTCAATGATCAAGC+TGG | 0.567016 | 3_2:+32688309 | Msa0403180:CDS |
| AAAGTGCGGAGACTGCGACT+TGG | 0.575984 | 3_2:+32688429 | Msa0403180:CDS |
| TCGCTTCAACAACTATAGAT+CGG | 0.588019 | 3_2:-32688353 | None:intergenic |
| ACATGGTTGGAATGCATGCA+TGG | 0.592737 | 3_2:+32688759 | Msa0403180:CDS |
| TTGAACTTCAGGATAACGAA+TGG | 0.592982 | 3_2:+32689018 | Msa0403180:intron |
| TCATAAAGATGAAATGCCTA+AGG | 0.597014 | 3_2:+32687936 | None:intergenic |
| TATTTGATGAAAGAAATCGT+TGG | 0.605775 | 3_2:+32689051 | Msa0403180:CDS |
| AACTCCAAAACCTATAGACC+GGG | 0.618933 | 3_2:-32688013 | None:intergenic |
| AGGCATACCCTGATTAAATG+TGG | 0.622617 | 3_2:+32689635 | Msa0403180:CDS |
| AGTATTACAAGAGTTATGCC+CGG | 0.630025 | 3_2:+32687995 | Msa0403180:CDS |
| AGTGCGGAGACTGCGACTTG+GGG | 0.633117 | 3_2:+32688431 | Msa0403180:CDS |
| TAAAGTTGAGAAGGAAAACA+TGG | 0.634633 | 3_2:+32689220 | Msa0403180:CDS |
| GGATGCCCTTTACTTCGAGT+CGG | 0.634910 | 3_2:-32689884 | None:intergenic |
| TATGCCACAAACACCATCGA+TGG | 0.638359 | 3_2:-32688860 | None:intergenic |
| TTTACTCTAGCATGTAGTCG+TGG | 0.642195 | 3_2:+32688078 | Msa0403180:CDS |
| ACTTGGGGTTGGAGATGCTG+AGG | 0.644897 | 3_2:+32688446 | Msa0403180:CDS |
| GGAGGAAGGATATAAGGCGA+AGG | 0.647816 | 3_2:+32689615 | Msa0403180:CDS |
| AGGATAACGAATGGTTGAAG+GGG | 0.650586 | 3_2:+32689027 | Msa0403180:intron |
| TTTGTTGGAGTAAATCACCA+TGG | 0.661689 | 3_2:+32688666 | Msa0403180:CDS |
| CTTGCAATTTAGATGCACAC+AGG | 0.664144 | 3_2:-32690088 | None:intergenic |
| TTTAGGAGGAATGAACATGG+TGG | 0.670141 | 3_2:+32690265 | Msa0403180:CDS |
| CCAACAACACAGATTGACCA+TGG | 0.675112 | 3_2:-32688683 | None:intergenic |
| GGAACTATATAGATAAAGTG+CGG | 0.685509 | 3_2:+32688415 | Msa0403180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAAAAAAAACATAAG+AGG | - | chr3_2:32690506-32690525 | None:intergenic | 10.0% |
| !!! | TTTTAGAAGTAATAAGATTT+TGG | + | chr3_2:32688266-32688285 | Msa0403180:intron | 15.0% |
| !!! | TTTATTACATGTATGTTTTT+AGG | + | chr3_2:32690228-32690247 | Msa0403180:intron | 15.0% |
| !!! | TTATTACATGTATGTTTTTA+GGG | + | chr3_2:32690229-32690248 | Msa0403180:intron | 15.0% |
| !!! | TTCATATTTTGAATTATTAC+AGG | + | chr3_2:32690463-32690482 | Msa0403180:intron | 15.0% |
| !!! | TCGTTTAAGAAATGTATTTT+GGG | + | chr3_2:32688545-32688564 | Msa0403180:CDS | 20.0% |
| !!! | TGATTTTGGTTCATTTAATA+CGG | + | chr3_2:32689244-32689263 | Msa0403180:CDS | 20.0% |
| !!! | GTCTAATTTTCAATATTTGA+TGG | + | chr3_2:32690060-32690079 | Msa0403180:intron | 20.0% |
| !!! | TATTACATGTATGTTTTTAG+GGG | + | chr3_2:32690230-32690249 | Msa0403180:intron | 20.0% |
| !!! | TTAGTCTAAAGTTTAAGAAT+TGG | + | chr3_2:32690754-32690773 | Msa0403180:intron | 20.0% |
| ! | ACTAAACTTAGTAGCAAAAA+TGG | + | chr3_2:32688036-32688055 | Msa0403180:CDS | 25.0% |
| !!! | TAAAATAGCGTGTTTTGTTA+GGG | - | chr3_2:32688251-32688270 | None:intergenic | 25.0% |
| !! | GTCGTTTAAGAAATGTATTT+TGG | + | chr3_2:32688544-32688563 | Msa0403180:CDS | 25.0% |
| ! | ATTGTCTTGATCAGTTATTA+TGG | - | chr3_2:32688799-32688818 | None:intergenic | 25.0% |
| ! | TTTGTGGCATATAATGAAAA+AGG | + | chr3_2:32688872-32688891 | Msa0403180:CDS | 25.0% |
| ! | TTTGAGTAAAAGTGATTTCA+TGG | + | chr3_2:32688968-32688987 | Msa0403180:intron | 25.0% |
| ! | TATTTGATGAAAGAAATCGT+TGG | + | chr3_2:32689051-32689070 | Msa0403180:CDS | 25.0% |
| ! | ATTTGATGAAAGAAATCGTT+GGG | + | chr3_2:32689052-32689071 | Msa0403180:CDS | 25.0% |
| ! | ATTGAAAGATAAAGTTGAGA+AGG | + | chr3_2:32689211-32689230 | Msa0403180:CDS | 25.0% |
| !! | AAATTCTTGGAATTTTGCAT+TGG | - | chr3_2:32689324-32689343 | None:intergenic | 25.0% |
| ! | AAAATTCCAAGAATTTCAAG+TGG | + | chr3_2:32689328-32689347 | Msa0403180:intron | 25.0% |
| ! | AATTAAAGACATAGTGTTTG+AGG | + | chr3_2:32689448-32689467 | Msa0403180:intron | 25.0% |
| !! | TGTTGTTTGTTTCAATTCAA+AGG | + | chr3_2:32689509-32689528 | Msa0403180:intron | 25.0% |
| ! | ATCAAAACCACATTTAATCA+GGG | - | chr3_2:32689645-32689664 | None:intergenic | 25.0% |
| ! | TATCAAAACCACATTTAATC+AGG | - | chr3_2:32689646-32689665 | None:intergenic | 25.0% |
| !!! | TGTGGTTTTGATAATTTAGT+TGG | + | chr3_2:32689653-32689672 | Msa0403180:CDS | 25.0% |
| ! | CATCTTCTTCTATAATTTCA+GGG | - | chr3_2:32689823-32689842 | None:intergenic | 25.0% |
| !!! | AATTTTCAATATTTGATGGC+AGG | + | chr3_2:32690064-32690083 | Msa0403180:intron | 25.0% |
| !!! | ATTACATGTATGTTTTTAGG+GGG | + | chr3_2:32690231-32690250 | Msa0403180:intron | 25.0% |
| !! | AGTATTGAATTTGGATTGAA+GGG | - | chr3_2:32690307-32690326 | None:intergenic | 25.0% |
| !!! | AAGTATTGAATTTGGATTGA+AGG | - | chr3_2:32690308-32690327 | None:intergenic | 25.0% |
| !!! | TCACTCATAAGTATTGAATT+TGG | - | chr3_2:32690316-32690335 | None:intergenic | 25.0% |
| !! | AAGTATGTTTCCTGTTATTT+AGG | + | chr3_2:32690406-32690425 | Msa0403180:intron | 25.0% |
| ! | TAAAATGGAACCTAAATAAC+AGG | - | chr3_2:32690419-32690438 | None:intergenic | 25.0% |
| !!! | ACTCTGTCATTTTTTTTTGA+AGG | + | chr3_2:32690548-32690567 | Msa0403180:intron | 25.0% |
| CTAAATATAGTTCCAACCTT+AGG | - | chr3_2:32687955-32687974 | None:intergenic | 30.0% | |
| !! | TTGCACTGGATTTTTGTTAT+AGG | - | chr3_2:32688147-32688166 | None:intergenic | 30.0% |
| TATAACAAAAATCCAGTGCA+AGG | + | chr3_2:32688146-32688165 | Msa0403180:CDS | 30.0% | |
| AATGCGTGTATTTCTTTAGA+CGG | + | chr3_2:32688177-32688196 | Msa0403180:intron | 30.0% | |
| !! | CTAAAATAGCGTGTTTTGTT+AGG | - | chr3_2:32688252-32688271 | None:intergenic | 30.0% |
| ! | GAATATGACATTTGGTGAAA+AGG | + | chr3_2:32688386-32688405 | Msa0403180:CDS | 30.0% |
| GGAACTATATAGATAAAGTG+CGG | + | chr3_2:32688415-32688434 | Msa0403180:CDS | 30.0% | |
| TGATCAGTTATTATGGCATT+TGG | - | chr3_2:32688792-32688811 | None:intergenic | 30.0% | |
| AAAGTGATTTCATGGAAAAG+TGG | + | chr3_2:32688976-32688995 | Msa0403180:intron | 30.0% | |
| AAGTGATTTCATGGAAAAGT+GGG | + | chr3_2:32688977-32688996 | Msa0403180:intron | 30.0% | |
| ! | GATTGAAGATTTTGAACTTC+AGG | + | chr3_2:32689007-32689026 | Msa0403180:intron | 30.0% |
| ! | ATATGTGAGAGACACATTTT+GGG | + | chr3_2:32689082-32689101 | Msa0403180:CDS | 30.0% |
| AGTATGAACTCATTCTTTGA+TGG | + | chr3_2:32689134-32689153 | Msa0403180:CDS | 30.0% | |
| TAAAGTTGAGAAGGAAAACA+TGG | + | chr3_2:32689220-32689239 | Msa0403180:CDS | 30.0% | |
| !! | ATAGCTTGTGTAAGTCATTT+TGG | + | chr3_2:32689269-32689288 | Msa0403180:intron | 30.0% |
| CCATCTTCTTCTATAATTTC+AGG | - | chr3_2:32689824-32689843 | None:intergenic | 30.0% | |
| CCTGAAATTATAGAAGAAGA+TGG | + | chr3_2:32689821-32689840 | Msa0403180:CDS | 30.0% | |
| ! | CACAATTTGATCAACTTTTG+AGG | - | chr3_2:32689927-32689946 | None:intergenic | 30.0% |
| TGAATAAACTTGCGAAAAAG+AGG | + | chr3_2:32689945-32689964 | Msa0403180:CDS | 30.0% | |
| !!! | ACTTACTTGGCTTCTTTTTT+TGG | - | chr3_2:32689972-32689991 | None:intergenic | 30.0% |
| AAAAAAAGAAGCCAAGTAAG+TGG | + | chr3_2:32689971-32689990 | Msa0403180:intron | 30.0% | |
| ! | TTTGATGATTTCCACTTACT+TGG | - | chr3_2:32689985-32690004 | None:intergenic | 30.0% |
| AAATCATCAAAGTCAACAAG+AGG | + | chr3_2:32689994-32690013 | Msa0403180:intron | 30.0% | |
| !! | GTTCAAGTAGTTGATAAAGT+TGG | + | chr3_2:32690116-32690135 | Msa0403180:CDS | 30.0% |
| !!! | TTACATGTATGTTTTTAGGG+GGG | + | chr3_2:32690232-32690251 | Msa0403180:intron | 30.0% |
| ACTTATGAGTGAAGTATATC+AGG | + | chr3_2:32690324-32690343 | Msa0403180:CDS | 30.0% | |
| TTCCTGGAACATTATTATTG+TGG | + | chr3_2:32690375-32690394 | Msa0403180:intron | 30.0% | |
| ATCCACAATAATAATGTTCC+AGG | - | chr3_2:32690380-32690399 | None:intergenic | 30.0% | |
| TTCATGACTTGAGGATAAAA+TGG | - | chr3_2:32690434-32690453 | None:intergenic | 30.0% | |
| TAAAGACATGTAGTGATGAT+TGG | + | chr3_2:32690621-32690640 | Msa0403180:intron | 30.0% | |
| CTAAAGTTTAAGAATTGGAG+TGG | + | chr3_2:32690759-32690778 | Msa0403180:intron | 30.0% | |
| GTGAGTTTATATTCATGCTT+CGG | + | chr3_2:32690786-32690805 | Msa0403180:intron | 30.0% | |
| AGTATTACAAGAGTTATGCC+CGG | + | chr3_2:32687995-32688014 | Msa0403180:CDS | 35.0% | |
| TAACTCCAAAACCTATAGAC+CGG | - | chr3_2:32688017-32688036 | None:intergenic | 35.0% | |
| AGTAGCAAAAATGGAGATGA+TGG | + | chr3_2:32688045-32688064 | Msa0403180:CDS | 35.0% | |
| ATTGCTCTTGAGCATAATCA+TGG | + | chr3_2:32688219-32688238 | Msa0403180:intron | 35.0% | |
| ! | TTTTGGATCCTCGTTTGAAA+AGG | + | chr3_2:32688283-32688302 | Msa0403180:intron | 35.0% |
| TTAGAACTCAATGATCAAGC+TGG | + | chr3_2:32688309-32688328 | Msa0403180:CDS | 35.0% | |
| TCGCTTCAACAACTATAGAT+CGG | - | chr3_2:32688356-32688375 | None:intergenic | 35.0% | |
| TCTATAGTTGTTGAAGCGAA+TGG | + | chr3_2:32688357-32688376 | Msa0403180:CDS | 35.0% | |
| CTATAGTTGTTGAAGCGAAT+GGG | + | chr3_2:32688358-32688377 | Msa0403180:CDS | 35.0% | |
| GGGTATGAGAATATGACATT+TGG | + | chr3_2:32688378-32688397 | Msa0403180:CDS | 35.0% | |
| ! | CATTTGGTGAAAAGGATTGT+AGG | + | chr3_2:32688394-32688413 | Msa0403180:CDS | 35.0% |
| ! | AGGGCTGCATATGAATATTT+TGG | + | chr3_2:32688582-32688601 | Msa0403180:CDS | 35.0% |
| TGGTGATTTACTCCAACAAA+AGG | - | chr3_2:32688666-32688685 | None:intergenic | 35.0% | |
| TTTGTTGGAGTAAATCACCA+TGG | + | chr3_2:32688666-32688685 | Msa0403180:CDS | 35.0% | |
| AGGATACTAAGACCTTTACT+TGG | + | chr3_2:32688727-32688746 | Msa0403180:CDS | 35.0% | |
| TGCCATGAAAAATGCAATTG+CGG | + | chr3_2:32688818-32688837 | Msa0403180:CDS | 35.0% | |
| ! | ATCCGCAATTGCATTTTTCA+TGG | - | chr3_2:32688823-32688842 | None:intergenic | 35.0% |
| AAAAAGGTTCCAGAAAAGCT+AGG | + | chr3_2:32688888-32688907 | Msa0403180:CDS | 35.0% | |
| TTGAACTTCAGGATAACGAA+TGG | + | chr3_2:32689018-32689037 | Msa0403180:intron | 35.0% | |
| ! | CATATGTGAGAGACACATTT+TGG | + | chr3_2:32689081-32689100 | Msa0403180:CDS | 35.0% |
| !! | AAGGAAAACATGGCTGATTT+TGG | + | chr3_2:32689230-32689249 | Msa0403180:CDS | 35.0% |
| ! | ATTCCAAGAATTTCAAGTGG+AGG | + | chr3_2:32689331-32689350 | Msa0403180:intron | 35.0% |
| TCATGCTTGCTTTGATAGAT+TGG | + | chr3_2:32689373-32689392 | Msa0403180:intron | 35.0% | |
| CTCAAAGTCTTTCTCATTGA+AGG | - | chr3_2:32689477-32689496 | None:intergenic | 35.0% | |
| TGCGAGAAAATATAAGAGGA+CGG | - | chr3_2:32689593-32689612 | None:intergenic | 35.0% | |
| ! | CTTTTACGAAGTTGCTTCTA+CGG | + | chr3_2:32689715-32689734 | Msa0403180:CDS | 35.0% |
| ! | TTTGAGGACTTCCTTTTTGA+AGG | - | chr3_2:32689911-32689930 | None:intergenic | 35.0% |
| !!! | AGTTTTAGGAGGAATGAACA+TGG | + | chr3_2:32690262-32690281 | Msa0403180:CDS | 35.0% |
| TATCCTCAAGTCATGAATCA+TGG | + | chr3_2:32690437-32690456 | Msa0403180:intron | 35.0% | |
| ! | TCAATGCTATTTAGAAGCAG+AGG | + | chr3_2:32690649-32690668 | Msa0403180:intron | 35.0% |
| TCATAGCAATCCTATGCTAA+AGG | - | chr3_2:32690699-32690718 | None:intergenic | 35.0% | |
| AACTCCAAAACCTATAGACC+GGG | - | chr3_2:32688016-32688035 | None:intergenic | 40.0% | |
| TTTACTCTAGCATGTAGTCG+TGG | + | chr3_2:32688078-32688097 | Msa0403180:CDS | 40.0% | |
| ! | TCTAACCTCCTTTTCAAACG+AGG | - | chr3_2:32688294-32688313 | None:intergenic | 40.0% |
| !! | ATGCCATTTGCTCCTTTTGT+TGG | + | chr3_2:32688651-32688670 | Msa0403180:CDS | 40.0% |
| ACTCCAACAAAAGGAGCAAA+TGG | - | chr3_2:32688657-32688676 | None:intergenic | 40.0% | |
| ! | CATGGTCAATCTGTGTTGTT+GGG | + | chr3_2:32688684-32688703 | Msa0403180:CDS | 40.0% |
| TGTTGTGAACAGCCAAGTAA+AGG | - | chr3_2:32688742-32688761 | None:intergenic | 40.0% | |
| TTACTTGGCTGTTCACAACA+TGG | + | chr3_2:32688742-32688761 | Msa0403180:CDS | 40.0% | |
| TCAGGATAACGAATGGTTGA+AGG | + | chr3_2:32689025-32689044 | Msa0403180:intron | 40.0% | |
| CAGGATAACGAATGGTTGAA+GGG | + | chr3_2:32689026-32689045 | Msa0403180:intron | 40.0% | |
| AGGATAACGAATGGTTGAAG+GGG | + | chr3_2:32689027-32689046 | Msa0403180:intron | 40.0% | |
| AATGTGTCTCTCACATATGC+AGG | - | chr3_2:32689080-32689099 | None:intergenic | 40.0% | |
| !! | TGGTGAATGCTTTCTGGAAT+TGG | - | chr3_2:32689304-32689323 | None:intergenic | 40.0% |
| ! | TTGCATTGGTGAATGCTTTC+TGG | - | chr3_2:32689310-32689329 | None:intergenic | 40.0% |
| CAACCTCCACTTGAAATTCT+TGG | - | chr3_2:32689337-32689356 | None:intergenic | 40.0% | |
| GCTTGCTTTGATAGATTGGA+AGG | + | chr3_2:32689377-32689396 | Msa0403180:intron | 40.0% | |
| ! | CTGTTAGCTTAAGCACACAA+AGG | - | chr3_2:32689553-32689572 | None:intergenic | 40.0% |
| CTTTGTGTGCTTAAGCTAAC+AGG | + | chr3_2:32689551-32689570 | Msa0403180:intron | 40.0% | |
| CCACTGCGAGAAAATATAAG+AGG | - | chr3_2:32689597-32689616 | None:intergenic | 40.0% | |
| ! | CCTCTTATATTTTCTCGCAG+TGG | + | chr3_2:32689594-32689613 | Msa0403180:intron | 40.0% |
| ! | CTTATATTTTCTCGCAGTGG+AGG | + | chr3_2:32689597-32689616 | Msa0403180:intron | 40.0% |
| AGGCATACCCTGATTAAATG+TGG | + | chr3_2:32689635-32689654 | Msa0403180:CDS | 40.0% | |
| CGTAGAAGCAACTTCGTAAA+AGG | - | chr3_2:32689717-32689736 | None:intergenic | 40.0% | |
| CTTGCAATTTAGATGCACAC+AGG | - | chr3_2:32690091-32690110 | None:intergenic | 40.0% | |
| TTTAGGAGGAATGAACATGG+TGG | + | chr3_2:32690265-32690284 | Msa0403180:CDS | 40.0% | |
| ACACCATGATTCATGACTTG+AGG | - | chr3_2:32690443-32690462 | None:intergenic | 40.0% | |
| ATTCACTCTGCCTTTAGCAT+AGG | + | chr3_2:32690686-32690705 | Msa0403180:intron | 40.0% | |
| AAGAGTTATGCCCGGTCTAT+AGG | + | chr3_2:32688003-32688022 | Msa0403180:CDS | 45.0% | |
| ! | TATGCCCGGTCTATAGGTTT+TGG | + | chr3_2:32688009-32688028 | Msa0403180:CDS | 45.0% |
| !! | CATTCAATCTAGCCTTGCAC+TGG | - | chr3_2:32688161-32688180 | None:intergenic | 45.0% |
| TGGATCCTCGTTTGAAAAGG+AGG | + | chr3_2:32688286-32688305 | Msa0403180:intron | 45.0% | |
| CCAACAACACAGATTGACCA+TGG | - | chr3_2:32688686-32688705 | None:intergenic | 45.0% | |
| CCATGGTCAATCTGTGTTGT+TGG | + | chr3_2:32688683-32688702 | Msa0403180:CDS | 45.0% | |
| ATGTGCTTTACTGTCAAGCG+AGG | + | chr3_2:32688707-32688726 | Msa0403180:intron | 45.0% | |
| TTGGCTGTTCACAACATGGT+TGG | + | chr3_2:32688746-32688765 | Msa0403180:CDS | 45.0% | |
| ACATGGTTGGAATGCATGCA+TGG | + | chr3_2:32688759-32688778 | Msa0403180:CDS | 45.0% | |
| TATGCCACAAACACCATCGA+TGG | - | chr3_2:32688863-32688882 | None:intergenic | 45.0% | |
| !! | GAGTGTCTACCTAGCTTTTC+TGG | - | chr3_2:32688900-32688919 | None:intergenic | 45.0% |
| ! | TGTGAGAGACACATTTTGGG+CGG | + | chr3_2:32689085-32689104 | Msa0403180:CDS | 45.0% |
| ! | TATTTTCTCGCAGTGGAGGA+AGG | + | chr3_2:32689601-32689620 | Msa0403180:intron | 45.0% |
| TTCAGGGCATGTTTCTTGAG+AGG | - | chr3_2:32689807-32689826 | None:intergenic | 45.0% | |
| CTTTACTTCGAGTCGGTACT+GGG | - | chr3_2:32689880-32689899 | None:intergenic | 45.0% | |
| !! | CAGTACCGACTCGAAGTAAA+GGG | + | chr3_2:32689879-32689898 | Msa0403180:CDS | 45.0% |
| !! | AAGGGCATCCTCCTTCAAAA+AGG | + | chr3_2:32689897-32689916 | Msa0403180:CDS | 45.0% |
| !! | GAGGACTTCCTTTTTGAAGG+AGG | - | chr3_2:32689908-32689927 | None:intergenic | 45.0% |
| !!! | AGGGGGGACACATTAGTTTT+AGG | + | chr3_2:32690248-32690267 | Msa0403180:intron | 45.0% |
| !!! | GGGGACACATTAGTTTTAGG+AGG | + | chr3_2:32690251-32690270 | Msa0403180:CDS | 45.0% |
| ! | TCCAGTGCTCTTTAGTTTCC+TGG | + | chr3_2:32690359-32690378 | Msa0403180:intron | 45.0% |
| ! | TCCAGGAAACTAAAGAGCAC+TGG | - | chr3_2:32690363-32690382 | None:intergenic | 45.0% |
| !! | CGTGTTGTTGATGATGACGA+TGG | - | chr3_2:32690594-32690613 | None:intergenic | 45.0% |
| TTTGGGCAGATGCGAGATGT+AGG | + | chr3_2:32688562-32688581 | Msa0403180:CDS | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | + | chr3_2:32688563-32688582 | Msa0403180:CDS | 50.0% | |
| TTCCAAAAGCTCGCCATCGA+TGG | + | chr3_2:32688847-32688866 | Msa0403180:CDS | 50.0% | |
| ! | GTGAGAGACACATTTTGGGC+GGG | + | chr3_2:32689086-32689105 | Msa0403180:CDS | 50.0% |
| CGCAGTGGAGGAAGGATATA+AGG | + | chr3_2:32689609-32689628 | Msa0403180:intron | 50.0% | |
| GGAGGAAGGATATAAGGCGA+AGG | + | chr3_2:32689615-32689634 | Msa0403180:CDS | 50.0% | |
| CCTTTACTTCGAGTCGGTAC+TGG | - | chr3_2:32689881-32689900 | None:intergenic | 50.0% | |
| !! | CCAGTACCGACTCGAAGTAA+AGG | + | chr3_2:32689878-32689897 | Msa0403180:CDS | 50.0% |
| GGATGCCCTTTACTTCGAGT+CGG | - | chr3_2:32689887-32689906 | None:intergenic | 50.0% | |
| AAAGTGCGGAGACTGCGACT+TGG | + | chr3_2:32688429-32688448 | Msa0403180:CDS | 55.0% | |
| AAGTGCGGAGACTGCGACTT+GGG | + | chr3_2:32688430-32688449 | Msa0403180:CDS | 55.0% | |
| ACTTGGGGTTGGAGATGCTG+AGG | + | chr3_2:32688446-32688465 | Msa0403180:CDS | 55.0% | |
| ! | CACCATCGATGGCGAGCTTT+TGG | - | chr3_2:32688852-32688871 | None:intergenic | 55.0% |
| CTCGCCATCGATGGTGTTTG+TGG | + | chr3_2:32688856-32688875 | Msa0403180:CDS | 55.0% | |
| AGTGCGGAGACTGCGACTTG+GGG | + | chr3_2:32688431-32688450 | Msa0403180:CDS | 60.0% | |
| ! | CGGAGACTGCGACTTGGGGT+TGG | + | chr3_2:32688435-32688454 | Msa0403180:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 32687949 | 32690891 | 32687949 | ID=Msa0403180;Name=Msa0403180 |
| chr3_2 | mRNA | 32687949 | 32690891 | 32687949 | ID=Msa0403180-mRNA-1;Parent=Msa0403180;Name=Msa0403180-mRNA-1;_AED=0.28;_eAED=0.38;_QI=0|0.11|0|0.8|0.22|0.2|10|0|545 |
| chr3_2 | exon | 32687949 | 32688181 | 32687949 | ID=Msa0403180-mRNA-1:exon:6468;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32688308 | 32688507 | 32688308 | ID=Msa0403180-mRNA-1:exon:6469;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32688529 | 32688718 | 32688529 | ID=Msa0403180-mRNA-1:exon:6470;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32688725 | 32688956 | 32688725 | ID=Msa0403180-mRNA-1:exon:6471;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32689029 | 32689265 | 32689029 | ID=Msa0403180-mRNA-1:exon:6472;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32689614 | 32689842 | 32689614 | ID=Msa0403180-mRNA-1:exon:6473;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32689849 | 32689985 | 32689849 | ID=Msa0403180-mRNA-1:exon:6474;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32690086 | 32690157 | 32690086 | ID=Msa0403180-mRNA-1:exon:6475;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32690250 | 32690345 | 32690250 | ID=Msa0403180-mRNA-1:exon:6476;Parent=Msa0403180-mRNA-1 |
| chr3_2 | exon | 32690883 | 32690891 | 32690883 | ID=Msa0403180-mRNA-1:exon:6477;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32687949 | 32688181 | 32687949 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32688308 | 32688507 | 32688308 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32688529 | 32688718 | 32688529 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32688725 | 32688956 | 32688725 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32689029 | 32689265 | 32689029 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32689614 | 32689842 | 32689614 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32689849 | 32689985 | 32689849 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32690086 | 32690157 | 32690086 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32690250 | 32690345 | 32690250 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| chr3_2 | CDS | 32690883 | 32690891 | 32690883 | ID=Msa0403180-mRNA-1:cds;Parent=Msa0403180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
