Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407050 | XP_003600003.2 | 76.892 | 251 | 38 | 3 | 10 | 256 | 1 | 235 | 1.51e-133 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407050 | sp|Q9LT81|C3H39_ARATH | 37.193 | 285 | 110 | 10 | 32 | 252 | 97 | 376 | 3.26e-48 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407050 | G7J1X0 | 76.892 | 251 | 38 | 3 | 10 | 256 | 1 | 235 | 7.22e-134 | 387 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0407050 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407050 | MtrunA17_Chr3g0098251 | 78.307 | 189 | 28 | 2 | 10 | 194 | 1 | 180 | 3.78e-103 | 298 |
| Msa0407050 | MtrunA17_Chr8g0360671 | 76.056 | 142 | 12 | 3 | 60 | 194 | 40 | 166 | 4.35e-69 | 210 |
| Msa0407050 | MtrunA17_Chr4g0063401 | 56.098 | 205 | 60 | 5 | 16 | 191 | 44 | 247 | 2.42e-68 | 211 |
| Msa0407050 | MtrunA17_Chr4g0063361 | 50.237 | 211 | 87 | 5 | 5 | 198 | 39 | 248 | 1.28e-62 | 196 |
| Msa0407050 | MtrunA17_Chr4g0063391 | 46.698 | 212 | 86 | 5 | 1 | 190 | 1 | 207 | 3.87e-54 | 174 |
| Msa0407050 | MtrunA17_Chr4g0063371 | 40.741 | 243 | 89 | 6 | 8 | 248 | 41 | 230 | 1.80e-43 | 147 |
| Msa0407050 | MtrunA17_Chr8g0366501 | 27.526 | 287 | 130 | 6 | 38 | 249 | 91 | 374 | 4.68e-27 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407050 | AT3G19360.1 | 37.193 | 285 | 110 | 10 | 32 | 252 | 97 | 376 | 3.31e-49 | 166 |
| Msa0407050 | AT3G19360.2 | 37.193 | 285 | 110 | 10 | 32 | 252 | 97 | 376 | 3.31e-49 | 166 |
| Msa0407050 | AT1G32360.1 | 28.094 | 299 | 122 | 9 | 38 | 249 | 90 | 382 | 3.55e-24 | 100 |
Find 73 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGAATGGATGCAGTTTC+TGG | 0.186612 | 3_2:+44360552 | Msa0407050:CDS |
| ATTCTTGCCCTCTTGTTCTT+TGG | 0.226992 | 3_2:-44360340 | None:intergenic |
| TCCTCTGCACTTGGCTAGTT+GGG | 0.257821 | 3_2:-44362128 | None:intergenic |
| CGGAGATGGTTCTAATAGTT+TGG | 0.293400 | 3_2:+44360729 | Msa0407050:CDS |
| CTCCTCTGCACTTGGCTAGT+TGG | 0.309412 | 3_2:-44362129 | None:intergenic |
| ATAGACTTAGGGATGATTCT+TGG | 0.310304 | 3_2:+44360668 | Msa0407050:CDS |
| TTTGCCACACTTAGACTTGC+TGG | 0.314187 | 3_2:-44362002 | None:intergenic |
| AAACAGGGCGTTGTCCCTTT+GGG | 0.321190 | 3_2:+44360824 | Msa0407050:CDS |
| CTCGTATTTGTCATAAGTTC+AGG | 0.326388 | 3_2:+44360428 | Msa0407050:CDS |
| TTACAGTAAGTCTCCCTTGC+TGG | 0.338395 | 3_2:-44360775 | None:intergenic |
| TTAATACTATATATGTTGAT+TGG | 0.349170 | 3_2:+44362081 | Msa0407050:CDS |
| CAAACAGGGCGTTGTCCCTT+TGG | 0.358171 | 3_2:+44360823 | Msa0407050:CDS |
| TAAGGAAGCCACCGCCGAAT+TGG | 0.369861 | 3_2:+44360506 | Msa0407050:CDS |
| GGTAATGATAATACTGGTAT+TGG | 0.385978 | 3_2:+44360877 | Msa0407050:CDS |
| TGTCCCATGTGGAAGCAAAC+AGG | 0.413714 | 3_2:+44360808 | Msa0407050:CDS |
| TTTGGGGAGGACTGTCACTA+TGG | 0.414198 | 3_2:+44360841 | Msa0407050:CDS |
| CTAATAGTTTGGAAGGCAAC+AGG | 0.423700 | 3_2:+44360740 | Msa0407050:CDS |
| ATGATATCGCTGTGGTGGTC+TGG | 0.425060 | 3_2:-44360313 | None:intergenic |
| CCAGCTAGCACCTTCCAATT+CGG | 0.426960 | 3_2:-44360520 | None:intergenic |
| ATTTGTCATAAGTTCAGGTT+TGG | 0.439137 | 3_2:+44360433 | Msa0407050:CDS |
| TTTAATTTCCACCAAAGTAA+AGG | 0.443077 | 3_2:-44362050 | None:intergenic |
| TTGCCACACTTAGACTTGCT+GGG | 0.445723 | 3_2:-44362001 | None:intergenic |
| AATGGTGAGGAATGTCCTTA+TGG | 0.454214 | 3_2:+44360625 | Msa0407050:CDS |
| CACTATGGTCATGGAGAAGC+AGG | 0.459706 | 3_2:+44360856 | Msa0407050:CDS |
| ACTTAGACTTGCTGGGATGC+TGG | 0.460120 | 3_2:-44361994 | None:intergenic |
| AGACGAAGCCTTTACTTTGG+TGG | 0.462105 | 3_2:+44362042 | Msa0407050:CDS |
| CAGAAAATCATTCACAAGAT+GGG | 0.463529 | 3_2:+44360583 | Msa0407050:CDS |
| GGCTAGTTGGGCAGAATAAG+AGG | 0.466221 | 3_2:-44362116 | None:intergenic |
| GAAGCAGGTAATGATAATAC+TGG | 0.469875 | 3_2:+44360871 | Msa0407050:CDS |
| AGCACCTTCCAATTCGGCGG+TGG | 0.473982 | 3_2:-44360514 | None:intergenic |
| CTGGCTCTCGCAACGAGGAA+TGG | 0.475242 | 3_2:+44360539 | Msa0407050:CDS |
| TCAGAAAATCATTCACAAGA+TGG | 0.481007 | 3_2:+44360582 | Msa0407050:CDS |
| CTCACGGGGTTGGTGAGATA+AGG | 0.482058 | 3_2:+44360488 | Msa0407050:CDS |
| CCGAATTGGAAGGTGCTAGC+TGG | 0.485538 | 3_2:+44360520 | Msa0407050:CDS |
| TAGGTACAATGTTCACCTTT+CGG | 0.492110 | 3_2:-44360463 | None:intergenic |
| AAACAACACTTATCACCATA+AGG | 0.495083 | 3_2:-44360640 | None:intergenic |
| TCTAAGTGTGGCAAAGGAAG+TGG | 0.499183 | 3_2:+44362010 | Msa0407050:CDS |
| CGCCCTGTTTGCTTCCACAT+GGG | 0.499410 | 3_2:-44360811 | None:intergenic |
| CTAAGACGAAGCCTTTACTT+TGG | 0.500430 | 3_2:+44362039 | Msa0407050:CDS |
| ACTTCCAATGTTTAATGCAC+AGG | 0.503756 | 3_2:-44360704 | None:intergenic |
| AACATTGTACCTATGCTCAC+GGG | 0.508915 | 3_2:+44360473 | Msa0407050:CDS |
| GATGGTTCTAATAGTTTGGA+AGG | 0.532918 | 3_2:+44360733 | Msa0407050:CDS |
| AACAGGGCGTTGTCCCTTTG+GGG | 0.544556 | 3_2:+44360825 | Msa0407050:CDS |
| TGTACCTATGCTCACGGGGT+TGG | 0.546278 | 3_2:+44360478 | Msa0407050:CDS |
| TAGTGACAGTCCTCCCCAAA+GGG | 0.553368 | 3_2:-44360838 | None:intergenic |
| GCATTAAACATTGGAAGTAT+CGG | 0.556102 | 3_2:+44360709 | Msa0407050:CDS |
| AGCAAGTCTAAGTGTGGCAA+AGG | 0.556244 | 3_2:+44362004 | Msa0407050:CDS |
| GAGGACTGTCACTATGGTCA+TGG | 0.559170 | 3_2:+44360847 | Msa0407050:CDS |
| AGGTTTGGTAATTGTCCGAA+AGG | 0.564006 | 3_2:+44360448 | Msa0407050:CDS |
| ACGCCCTGTTTGCTTCCACA+TGG | 0.564079 | 3_2:-44360812 | None:intergenic |
| AACATTGGAAGTATCGGAGA+TGG | 0.569972 | 3_2:+44360715 | Msa0407050:CDS |
| GAACATTGTACCTATGCTCA+CGG | 0.579167 | 3_2:+44360472 | Msa0407050:CDS |
| GGTCTGTGAACAAGCCAGCA+AGG | 0.586365 | 3_2:+44360761 | Msa0407050:CDS |
| GTCTGTGAACAAGCCAGCAA+GGG | 0.590502 | 3_2:+44360762 | Msa0407050:CDS |
| GAAGCCACCGCCGAATTGGA+AGG | 0.590951 | 3_2:+44360510 | Msa0407050:CDS |
| TCATGTTTCCAAAGAACAAG+AGG | 0.592600 | 3_2:+44360332 | Msa0407050:CDS |
| GTCCCATGTGGAAGCAAACA+GGG | 0.595288 | 3_2:+44360809 | Msa0407050:CDS |
| AGAAAATCATTCACAAGATG+GGG | 0.602501 | 3_2:+44360584 | Msa0407050:CDS |
| GAGGCCTGTGCATTAAACAT+TGG | 0.604839 | 3_2:+44360700 | Msa0407050:CDS |
| CTCACCAACCCCGTGAGCAT+AGG | 0.617079 | 3_2:-44360482 | None:intergenic |
| AGGGCGTTGTCCCTTTGGGG+AGG | 0.622418 | 3_2:+44360828 | Msa0407050:CDS |
| GCTAGCACCTTCCAATTCGG+CGG | 0.643744 | 3_2:-44360517 | None:intergenic |
| ATAGTGACAGTCCTCCCCAA+AGG | 0.646765 | 3_2:-44360839 | None:intergenic |
| CATGTTTCCAAAGAACAAGA+GGG | 0.650159 | 3_2:+44360333 | Msa0407050:CDS |
| CATCCCAGCAAGTCTAAGTG+TGG | 0.664369 | 3_2:+44361998 | Msa0407050:CDS |
| CAAGAAATACTACAATGGTG+AGG | 0.666991 | 3_2:+44360612 | Msa0407050:CDS |
| CTATGCAAGAAATACTACAA+TGG | 0.669884 | 3_2:+44360607 | Msa0407050:CDS |
| GAAACATGATATCGCTGTGG+TGG | 0.671066 | 3_2:-44360318 | None:intergenic |
| TGATTCTTGGAAATCAAGAG+AGG | 0.676002 | 3_2:+44360681 | Msa0407050:CDS |
| ACATTGTACCTATGCTCACG+GGG | 0.692970 | 3_2:+44360474 | Msa0407050:CDS |
| AGACTAAGCTGTGTCCCATG+TGG | 0.715051 | 3_2:+44360797 | Msa0407050:CDS |
| GCTAGCTGGCTCTCGCAACG+AGG | 0.720200 | 3_2:+44360534 | Msa0407050:CDS |
| TTGGAAACATGATATCGCTG+TGG | 0.734366 | 3_2:-44360321 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTACAAGA+CGG | + | chr3_2:44361873-44361892 | Msa0407050:intron | 10.0% |
| !! | AAAAAAAAAAAATTACAAGA+CGG | + | chr3_2:44361873-44361892 | Msa0407050:intron | 10.0% |
| !!! | ACAATATTTTATACTAGATA+GGG | + | chr3_2:44361535-44361554 | Msa0407050:intron | 15.0% |
| !! | TTAATACTATATATGTTGAT+TGG | + | chr3_2:44362081-44362100 | Msa0407050:CDS | 15.0% |
| !!! | ACAATATTTTATACTAGATA+GGG | + | chr3_2:44361535-44361554 | Msa0407050:intron | 15.0% |
| !! | TTAATACTATATATGTTGAT+TGG | + | chr3_2:44362081-44362100 | Msa0407050:CDS | 15.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | - | chr3_2:44361528-44361547 | None:intergenic | 20.0% |
| !!! | CACAATATTTTATACTAGAT+AGG | + | chr3_2:44361534-44361553 | Msa0407050:intron | 20.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | - | chr3_2:44361528-44361547 | None:intergenic | 20.0% |
| !!! | CACAATATTTTATACTAGAT+AGG | + | chr3_2:44361534-44361553 | Msa0407050:intron | 20.0% |
| !! | TTGTTTTCTTCATAGACTTA+GGG | + | chr3_2:44360657-44360676 | Msa0407050:CDS | 25.0% |
| ! | TACTTGCTTATAGTTAAAGT+TGG | + | chr3_2:44361132-44361151 | Msa0407050:intron | 25.0% |
| ! | TGAATGAACAAAATACCAAA+TGG | - | chr3_2:44361168-44361187 | None:intergenic | 25.0% |
| ! | TTATACTAGATAGGGTATAA+TGG | + | chr3_2:44361543-44361562 | Msa0407050:intron | 25.0% |
| !! | TTTAATTTCCACCAAAGTAA+AGG | - | chr3_2:44362053-44362072 | None:intergenic | 25.0% |
| !! | TTGTTTTCTTCATAGACTTA+GGG | + | chr3_2:44360657-44360676 | Msa0407050:CDS | 25.0% |
| ! | TACTTGCTTATAGTTAAAGT+TGG | + | chr3_2:44361132-44361151 | Msa0407050:intron | 25.0% |
| ! | TGAATGAACAAAATACCAAA+TGG | - | chr3_2:44361168-44361187 | None:intergenic | 25.0% |
| ! | TTATACTAGATAGGGTATAA+TGG | + | chr3_2:44361543-44361562 | Msa0407050:intron | 25.0% |
| !! | TTTAATTTCCACCAAAGTAA+AGG | - | chr3_2:44362053-44362072 | None:intergenic | 25.0% |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | + | chr3_2:44360433-44360452 | Msa0407050:CDS | 30.0% |
| TCAGAAAATCATTCACAAGA+TGG | + | chr3_2:44360582-44360601 | Msa0407050:CDS | 30.0% | |
| CAGAAAATCATTCACAAGAT+GGG | + | chr3_2:44360583-44360602 | Msa0407050:CDS | 30.0% | |
| AGAAAATCATTCACAAGATG+GGG | + | chr3_2:44360584-44360603 | Msa0407050:CDS | 30.0% | |
| CTATGCAAGAAATACTACAA+TGG | + | chr3_2:44360607-44360626 | Msa0407050:CDS | 30.0% | |
| AAACAACACTTATCACCATA+AGG | - | chr3_2:44360643-44360662 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCTTCATAGACTT+AGG | + | chr3_2:44360656-44360675 | Msa0407050:CDS | 30.0% |
| ! | GCATTAAACATTGGAAGTAT+CGG | + | chr3_2:44360709-44360728 | Msa0407050:CDS | 30.0% |
| GGTAATGATAATACTGGTAT+TGG | + | chr3_2:44360877-44360896 | Msa0407050:CDS | 30.0% | |
| ! | GTAATTCTACTGTTCTGTTT+TGG | + | chr3_2:44360911-44360930 | Msa0407050:intron | 30.0% |
| TTATAGTGTTTGATTGTGTG+TGG | + | chr3_2:44361014-44361033 | Msa0407050:intron | 30.0% | |
| ! | GTGTGTCATATTTTCATGTT+TGG | + | chr3_2:44361048-44361067 | Msa0407050:intron | 30.0% |
| AGGTAGCTGATCATATTAAA+TGG | + | chr3_2:44361097-44361116 | Msa0407050:intron | 30.0% | |
| TGAGTAATCATACATACAAG+TGG | - | chr3_2:44361222-44361241 | None:intergenic | 30.0% | |
| TATGTTTGACTGCAACATTA+CGG | - | chr3_2:44361721-44361740 | None:intergenic | 30.0% | |
| AACAGTTAGAAGAAGATACA+GGG | - | chr3_2:44361925-44361944 | None:intergenic | 30.0% | |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | + | chr3_2:44360433-44360452 | Msa0407050:CDS | 30.0% |
| TCAGAAAATCATTCACAAGA+TGG | + | chr3_2:44360582-44360601 | Msa0407050:CDS | 30.0% | |
| CAGAAAATCATTCACAAGAT+GGG | + | chr3_2:44360583-44360602 | Msa0407050:CDS | 30.0% | |
| AGAAAATCATTCACAAGATG+GGG | + | chr3_2:44360584-44360603 | Msa0407050:CDS | 30.0% | |
| CTATGCAAGAAATACTACAA+TGG | + | chr3_2:44360607-44360626 | Msa0407050:CDS | 30.0% | |
| AAACAACACTTATCACCATA+AGG | - | chr3_2:44360643-44360662 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCTTCATAGACTT+AGG | + | chr3_2:44360656-44360675 | Msa0407050:CDS | 30.0% |
| ! | GCATTAAACATTGGAAGTAT+CGG | + | chr3_2:44360709-44360728 | Msa0407050:CDS | 30.0% |
| GGTAATGATAATACTGGTAT+TGG | + | chr3_2:44360877-44360896 | Msa0407050:CDS | 30.0% | |
| ! | GTAATTCTACTGTTCTGTTT+TGG | + | chr3_2:44360911-44360930 | Msa0407050:intron | 30.0% |
| TTATAGTGTTTGATTGTGTG+TGG | + | chr3_2:44361014-44361033 | Msa0407050:intron | 30.0% | |
| ! | GTGTGTCATATTTTCATGTT+TGG | + | chr3_2:44361048-44361067 | Msa0407050:intron | 30.0% |
| AGGTAGCTGATCATATTAAA+TGG | + | chr3_2:44361097-44361116 | Msa0407050:intron | 30.0% | |
| TGAGTAATCATACATACAAG+TGG | - | chr3_2:44361222-44361241 | None:intergenic | 30.0% | |
| TATGTTTGACTGCAACATTA+CGG | - | chr3_2:44361721-44361740 | None:intergenic | 30.0% | |
| AACAGTTAGAAGAAGATACA+GGG | - | chr3_2:44361925-44361944 | None:intergenic | 30.0% | |
| TCATGTTTCCAAAGAACAAG+AGG | + | chr3_2:44360332-44360351 | Msa0407050:CDS | 35.0% | |
| CATGTTTCCAAAGAACAAGA+GGG | + | chr3_2:44360333-44360352 | Msa0407050:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | + | chr3_2:44360428-44360447 | Msa0407050:CDS | 35.0% | |
| TAGGTACAATGTTCACCTTT+CGG | - | chr3_2:44360466-44360485 | None:intergenic | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | + | chr3_2:44360612-44360631 | Msa0407050:CDS | 35.0% | |
| ATAGACTTAGGGATGATTCT+TGG | + | chr3_2:44360668-44360687 | Msa0407050:CDS | 35.0% | |
| TGATTCTTGGAAATCAAGAG+AGG | + | chr3_2:44360681-44360700 | Msa0407050:CDS | 35.0% | |
| ACTTCCAATGTTTAATGCAC+AGG | - | chr3_2:44360707-44360726 | None:intergenic | 35.0% | |
| !! | GATGGTTCTAATAGTTTGGA+AGG | + | chr3_2:44360733-44360752 | Msa0407050:CDS | 35.0% |
| GAAGCAGGTAATGATAATAC+TGG | + | chr3_2:44360871-44360890 | Msa0407050:CDS | 35.0% | |
| TATGATCAGCTACCTTAAGA+GGG | - | chr3_2:44361092-44361111 | None:intergenic | 35.0% | |
| ATATGATCAGCTACCTTAAG+AGG | - | chr3_2:44361093-44361112 | None:intergenic | 35.0% | |
| !! | GTTGGTTCTGAATAACCATT+TGG | + | chr3_2:44361150-44361169 | Msa0407050:intron | 35.0% |
| ATAATAGCCATTGTAGCCTA+TGG | - | chr3_2:44361315-44361334 | None:intergenic | 35.0% | |
| GCTACAATGGCTATTATATC+TGG | + | chr3_2:44361318-44361337 | Msa0407050:intron | 35.0% | |
| AAAAATCTGGCATACAAGCA+TGG | - | chr3_2:44361368-44361387 | None:intergenic | 35.0% | |
| ! | ATGCTTGTATGCCAGATTTT+TGG | + | chr3_2:44361367-44361386 | Msa0407050:intron | 35.0% |
| TGTTATCATAAGTGGAAGGA+AGG | - | chr3_2:44361406-44361425 | None:intergenic | 35.0% | |
| TGACAACAGTATGTAAACCT+CGG | - | chr3_2:44361438-44361457 | None:intergenic | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | - | chr3_2:44361607-44361626 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | - | chr3_2:44361617-44361636 | None:intergenic | 35.0% | |
| TGTCTGACTCATCAATAAGT+TGG | + | chr3_2:44361648-44361667 | Msa0407050:intron | 35.0% | |
| AACATTTGCAAACACGATTG+TGG | - | chr3_2:44361797-44361816 | None:intergenic | 35.0% | |
| GAACAGTTAGAAGAAGATAC+AGG | - | chr3_2:44361926-44361945 | None:intergenic | 35.0% | |
| ACCAAATGTCTTACCAGTTT+CGG | + | chr3_2:44361956-44361975 | Msa0407050:intron | 35.0% | |
| TCATGTTTCCAAAGAACAAG+AGG | + | chr3_2:44360332-44360351 | Msa0407050:CDS | 35.0% | |
| CATGTTTCCAAAGAACAAGA+GGG | + | chr3_2:44360333-44360352 | Msa0407050:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | + | chr3_2:44360428-44360447 | Msa0407050:CDS | 35.0% | |
| TAGGTACAATGTTCACCTTT+CGG | - | chr3_2:44360466-44360485 | None:intergenic | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | + | chr3_2:44360612-44360631 | Msa0407050:CDS | 35.0% | |
| ATAGACTTAGGGATGATTCT+TGG | + | chr3_2:44360668-44360687 | Msa0407050:CDS | 35.0% | |
| TGATTCTTGGAAATCAAGAG+AGG | + | chr3_2:44360681-44360700 | Msa0407050:CDS | 35.0% | |
| ACTTCCAATGTTTAATGCAC+AGG | - | chr3_2:44360707-44360726 | None:intergenic | 35.0% | |
| !! | GATGGTTCTAATAGTTTGGA+AGG | + | chr3_2:44360733-44360752 | Msa0407050:CDS | 35.0% |
| GAAGCAGGTAATGATAATAC+TGG | + | chr3_2:44360871-44360890 | Msa0407050:CDS | 35.0% | |
| TATGATCAGCTACCTTAAGA+GGG | - | chr3_2:44361092-44361111 | None:intergenic | 35.0% | |
| ATATGATCAGCTACCTTAAG+AGG | - | chr3_2:44361093-44361112 | None:intergenic | 35.0% | |
| !! | GTTGGTTCTGAATAACCATT+TGG | + | chr3_2:44361150-44361169 | Msa0407050:intron | 35.0% |
| ATAATAGCCATTGTAGCCTA+TGG | - | chr3_2:44361315-44361334 | None:intergenic | 35.0% | |
| GCTACAATGGCTATTATATC+TGG | + | chr3_2:44361318-44361337 | Msa0407050:intron | 35.0% | |
| AAAAATCTGGCATACAAGCA+TGG | - | chr3_2:44361368-44361387 | None:intergenic | 35.0% | |
| ! | ATGCTTGTATGCCAGATTTT+TGG | + | chr3_2:44361367-44361386 | Msa0407050:intron | 35.0% |
| TGTTATCATAAGTGGAAGGA+AGG | - | chr3_2:44361406-44361425 | None:intergenic | 35.0% | |
| TGACAACAGTATGTAAACCT+CGG | - | chr3_2:44361438-44361457 | None:intergenic | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | - | chr3_2:44361607-44361626 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | - | chr3_2:44361617-44361636 | None:intergenic | 35.0% | |
| TGTCTGACTCATCAATAAGT+TGG | + | chr3_2:44361648-44361667 | Msa0407050:intron | 35.0% | |
| AACATTTGCAAACACGATTG+TGG | - | chr3_2:44361797-44361816 | None:intergenic | 35.0% | |
| GAACAGTTAGAAGAAGATAC+AGG | - | chr3_2:44361926-44361945 | None:intergenic | 35.0% | |
| ACCAAATGTCTTACCAGTTT+CGG | + | chr3_2:44361956-44361975 | Msa0407050:intron | 35.0% | |
| TTGGAAACATGATATCGCTG+TGG | - | chr3_2:44360324-44360343 | None:intergenic | 40.0% | |
| ATTCTTGCCCTCTTGTTCTT+TGG | - | chr3_2:44360343-44360362 | None:intergenic | 40.0% | |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | + | chr3_2:44360448-44360467 | Msa0407050:CDS | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | + | chr3_2:44360472-44360491 | Msa0407050:CDS | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | + | chr3_2:44360473-44360492 | Msa0407050:CDS | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | + | chr3_2:44360625-44360644 | Msa0407050:CDS | 40.0% | |
| !! | AACATTGGAAGTATCGGAGA+TGG | + | chr3_2:44360715-44360734 | Msa0407050:CDS | 40.0% |
| !! | CGGAGATGGTTCTAATAGTT+TGG | + | chr3_2:44360729-44360748 | Msa0407050:CDS | 40.0% |
| CTAATAGTTTGGAAGGCAAC+AGG | + | chr3_2:44360740-44360759 | Msa0407050:CDS | 40.0% | |
| ACATAAACTTGCCCCTCTTA+AGG | + | chr3_2:44361077-44361096 | Msa0407050:intron | 40.0% | |
| ATGATCAGCTACCTTAAGAG+GGG | - | chr3_2:44361091-44361110 | None:intergenic | 40.0% | |
| GCAGTGTTATCATAAGTGGA+AGG | - | chr3_2:44361410-44361429 | None:intergenic | 40.0% | |
| CAGAGCAGTGTTATCATAAG+TGG | - | chr3_2:44361414-44361433 | None:intergenic | 40.0% | |
| CTGTTGTCAATTGTAGATCG+CGG | + | chr3_2:44361449-44361468 | Msa0407050:intron | 40.0% | |
| GCAATAGAATTGTTGTGCAG+CGG | - | chr3_2:44361497-44361516 | None:intergenic | 40.0% | |
| GAGAAACAGGGTGGAAAATA+TGG | - | chr3_2:44361595-44361614 | None:intergenic | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | - | chr3_2:44361608-44361627 | None:intergenic | 40.0% | |
| ! | CTGACTCATCAATAAGTTGG+AGG | + | chr3_2:44361651-44361670 | Msa0407050:intron | 40.0% |
| GAGGTACATTTCTCATTGCA+AGG | + | chr3_2:44361670-44361689 | Msa0407050:intron | 40.0% | |
| TAATGCAACTGCAGTTGTGA+TGG | + | chr3_2:44361743-44361762 | Msa0407050:intron | 40.0% | |
| CTAAGACGAAGCCTTTACTT+TGG | + | chr3_2:44362039-44362058 | Msa0407050:CDS | 40.0% | |
| TTGGAAACATGATATCGCTG+TGG | - | chr3_2:44360324-44360343 | None:intergenic | 40.0% | |
| ATTCTTGCCCTCTTGTTCTT+TGG | - | chr3_2:44360343-44360362 | None:intergenic | 40.0% | |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | + | chr3_2:44360448-44360467 | Msa0407050:CDS | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | + | chr3_2:44360472-44360491 | Msa0407050:CDS | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | + | chr3_2:44360473-44360492 | Msa0407050:CDS | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | + | chr3_2:44360625-44360644 | Msa0407050:CDS | 40.0% | |
| !! | AACATTGGAAGTATCGGAGA+TGG | + | chr3_2:44360715-44360734 | Msa0407050:CDS | 40.0% |
| !! | CGGAGATGGTTCTAATAGTT+TGG | + | chr3_2:44360729-44360748 | Msa0407050:CDS | 40.0% |
| CTAATAGTTTGGAAGGCAAC+AGG | + | chr3_2:44360740-44360759 | Msa0407050:CDS | 40.0% | |
| ACATAAACTTGCCCCTCTTA+AGG | + | chr3_2:44361077-44361096 | Msa0407050:intron | 40.0% | |
| ATGATCAGCTACCTTAAGAG+GGG | - | chr3_2:44361091-44361110 | None:intergenic | 40.0% | |
| GCAGTGTTATCATAAGTGGA+AGG | - | chr3_2:44361410-44361429 | None:intergenic | 40.0% | |
| CAGAGCAGTGTTATCATAAG+TGG | - | chr3_2:44361414-44361433 | None:intergenic | 40.0% | |
| CTGTTGTCAATTGTAGATCG+CGG | + | chr3_2:44361449-44361468 | Msa0407050:intron | 40.0% | |
| GCAATAGAATTGTTGTGCAG+CGG | - | chr3_2:44361497-44361516 | None:intergenic | 40.0% | |
| GAGAAACAGGGTGGAAAATA+TGG | - | chr3_2:44361595-44361614 | None:intergenic | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | - | chr3_2:44361608-44361627 | None:intergenic | 40.0% | |
| ! | CTGACTCATCAATAAGTTGG+AGG | + | chr3_2:44361651-44361670 | Msa0407050:intron | 40.0% |
| GAGGTACATTTCTCATTGCA+AGG | + | chr3_2:44361670-44361689 | Msa0407050:intron | 40.0% | |
| TAATGCAACTGCAGTTGTGA+TGG | + | chr3_2:44361743-44361762 | Msa0407050:intron | 40.0% | |
| CTAAGACGAAGCCTTTACTT+TGG | + | chr3_2:44362039-44362058 | Msa0407050:CDS | 40.0% | |
| GAAACATGATATCGCTGTGG+TGG | - | chr3_2:44360321-44360340 | None:intergenic | 45.0% | |
| ACATTGTACCTATGCTCACG+GGG | + | chr3_2:44360474-44360493 | Msa0407050:CDS | 45.0% | |
| GAGGCCTGTGCATTAAACAT+TGG | + | chr3_2:44360700-44360719 | Msa0407050:CDS | 45.0% | |
| TTACAGTAAGTCTCCCTTGC+TGG | - | chr3_2:44360778-44360797 | None:intergenic | 45.0% | |
| ATAGCCATTGTAGCCTATGG+CGG | - | chr3_2:44361312-44361331 | None:intergenic | 45.0% | |
| ! | ATCTGGCATGTTTCTGCCAT+AGG | + | chr3_2:44361335-44361354 | Msa0407050:intron | 45.0% |
| ATGGCAGCTAGCCAAAAATC+TGG | - | chr3_2:44361381-44361400 | None:intergenic | 45.0% | |
| CATAAGTGGAAGGAAGGCTA+TGG | - | chr3_2:44361400-44361419 | None:intergenic | 45.0% | |
| GTTATCACACGAAAACGAGC+AGG | - | chr3_2:44361830-44361849 | None:intergenic | 45.0% | |
| GCCGAAACTGGTAAGACATT+TGG | - | chr3_2:44361960-44361979 | None:intergenic | 45.0% | |
| GTTGCATCATTAGCCGAAAC+TGG | - | chr3_2:44361972-44361991 | None:intergenic | 45.0% | |
| ! | TTGCCACACTTAGACTTGCT+GGG | - | chr3_2:44362004-44362023 | None:intergenic | 45.0% |
| TTTGCCACACTTAGACTTGC+TGG | - | chr3_2:44362005-44362024 | None:intergenic | 45.0% | |
| AGCAAGTCTAAGTGTGGCAA+AGG | + | chr3_2:44362004-44362023 | Msa0407050:CDS | 45.0% | |
| TCTAAGTGTGGCAAAGGAAG+TGG | + | chr3_2:44362010-44362029 | Msa0407050:CDS | 45.0% | |
| AGACGAAGCCTTTACTTTGG+TGG | + | chr3_2:44362042-44362061 | Msa0407050:CDS | 45.0% | |
| GAAACATGATATCGCTGTGG+TGG | - | chr3_2:44360321-44360340 | None:intergenic | 45.0% | |
| ACATTGTACCTATGCTCACG+GGG | + | chr3_2:44360474-44360493 | Msa0407050:CDS | 45.0% | |
| GAGGCCTGTGCATTAAACAT+TGG | + | chr3_2:44360700-44360719 | Msa0407050:CDS | 45.0% | |
| TTACAGTAAGTCTCCCTTGC+TGG | - | chr3_2:44360778-44360797 | None:intergenic | 45.0% | |
| ATAGCCATTGTAGCCTATGG+CGG | - | chr3_2:44361312-44361331 | None:intergenic | 45.0% | |
| ! | ATCTGGCATGTTTCTGCCAT+AGG | + | chr3_2:44361335-44361354 | Msa0407050:intron | 45.0% |
| ATGGCAGCTAGCCAAAAATC+TGG | - | chr3_2:44361381-44361400 | None:intergenic | 45.0% | |
| CATAAGTGGAAGGAAGGCTA+TGG | - | chr3_2:44361400-44361419 | None:intergenic | 45.0% | |
| GTTATCACACGAAAACGAGC+AGG | - | chr3_2:44361830-44361849 | None:intergenic | 45.0% | |
| GCCGAAACTGGTAAGACATT+TGG | - | chr3_2:44361960-44361979 | None:intergenic | 45.0% | |
| GTTGCATCATTAGCCGAAAC+TGG | - | chr3_2:44361972-44361991 | None:intergenic | 45.0% | |
| ! | TTGCCACACTTAGACTTGCT+GGG | - | chr3_2:44362004-44362023 | None:intergenic | 45.0% |
| TTTGCCACACTTAGACTTGC+TGG | - | chr3_2:44362005-44362024 | None:intergenic | 45.0% | |
| AGCAAGTCTAAGTGTGGCAA+AGG | + | chr3_2:44362004-44362023 | Msa0407050:CDS | 45.0% | |
| TCTAAGTGTGGCAAAGGAAG+TGG | + | chr3_2:44362010-44362029 | Msa0407050:CDS | 45.0% | |
| AGACGAAGCCTTTACTTTGG+TGG | + | chr3_2:44362042-44362061 | Msa0407050:CDS | 45.0% | |
| ATGATATCGCTGTGGTGGTC+TGG | - | chr3_2:44360316-44360335 | None:intergenic | 50.0% | |
| CCAGCTAGCACCTTCCAATT+CGG | - | chr3_2:44360523-44360542 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | + | chr3_2:44360552-44360571 | Msa0407050:CDS | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | + | chr3_2:44360762-44360781 | Msa0407050:CDS | 50.0% | |
| AGACTAAGCTGTGTCCCATG+TGG | + | chr3_2:44360797-44360816 | Msa0407050:CDS | 50.0% | |
| TGTCCCATGTGGAAGCAAAC+AGG | + | chr3_2:44360808-44360827 | Msa0407050:CDS | 50.0% | |
| GTCCCATGTGGAAGCAAACA+GGG | + | chr3_2:44360809-44360828 | Msa0407050:CDS | 50.0% | |
| !! | AAACAGGGCGTTGTCCCTTT+GGG | + | chr3_2:44360824-44360843 | Msa0407050:CDS | 50.0% |
| TAGTGACAGTCCTCCCCAAA+GGG | - | chr3_2:44360841-44360860 | None:intergenic | 50.0% | |
| ATAGTGACAGTCCTCCCCAA+AGG | - | chr3_2:44360842-44360861 | None:intergenic | 50.0% | |
| TTTGGGGAGGACTGTCACTA+TGG | + | chr3_2:44360841-44360860 | Msa0407050:CDS | 50.0% | |
| GAGGACTGTCACTATGGTCA+TGG | + | chr3_2:44360847-44360866 | Msa0407050:CDS | 50.0% | |
| CACTATGGTCATGGAGAAGC+AGG | + | chr3_2:44360856-44360875 | Msa0407050:CDS | 50.0% | |
| TTGTCGCCATAACTGCACCA+AGG | + | chr3_2:44361266-44361285 | Msa0407050:intron | 50.0% | |
| ! | TCCATGCCTTGGTGCAGTTA+TGG | - | chr3_2:44361275-44361294 | None:intergenic | 50.0% |
| ATAACTGCACCAAGGCATGG+AGG | + | chr3_2:44361274-44361293 | Msa0407050:intron | 50.0% | |
| ! | TGGCATACAAGCATGGACTG+TGG | - | chr3_2:44361361-44361380 | None:intergenic | 50.0% |
| TGATAACACTGCTCTGTCCG+AGG | + | chr3_2:44361418-44361437 | Msa0407050:intron | 50.0% | |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | + | chr3_2:44361599-44361618 | Msa0407050:intron | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | - | chr3_2:44361604-44361623 | None:intergenic | 50.0% | |
| TGCAACTGCAGTTGTGATGG+CGG | + | chr3_2:44361746-44361765 | Msa0407050:intron | 50.0% | |
| !! | ACTTAGACTTGCTGGGATGC+TGG | - | chr3_2:44361997-44362016 | None:intergenic | 50.0% |
| CATCCCAGCAAGTCTAAGTG+TGG | + | chr3_2:44361998-44362017 | Msa0407050:CDS | 50.0% | |
| ATGATATCGCTGTGGTGGTC+TGG | - | chr3_2:44360316-44360335 | None:intergenic | 50.0% | |
| CCAGCTAGCACCTTCCAATT+CGG | - | chr3_2:44360523-44360542 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | + | chr3_2:44360552-44360571 | Msa0407050:CDS | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | + | chr3_2:44360762-44360781 | Msa0407050:CDS | 50.0% | |
| AGACTAAGCTGTGTCCCATG+TGG | + | chr3_2:44360797-44360816 | Msa0407050:CDS | 50.0% | |
| TGTCCCATGTGGAAGCAAAC+AGG | + | chr3_2:44360808-44360827 | Msa0407050:CDS | 50.0% | |
| GTCCCATGTGGAAGCAAACA+GGG | + | chr3_2:44360809-44360828 | Msa0407050:CDS | 50.0% | |
| !! | AAACAGGGCGTTGTCCCTTT+GGG | + | chr3_2:44360824-44360843 | Msa0407050:CDS | 50.0% |
| TAGTGACAGTCCTCCCCAAA+GGG | - | chr3_2:44360841-44360860 | None:intergenic | 50.0% | |
| ATAGTGACAGTCCTCCCCAA+AGG | - | chr3_2:44360842-44360861 | None:intergenic | 50.0% | |
| TTTGGGGAGGACTGTCACTA+TGG | + | chr3_2:44360841-44360860 | Msa0407050:CDS | 50.0% | |
| GAGGACTGTCACTATGGTCA+TGG | + | chr3_2:44360847-44360866 | Msa0407050:CDS | 50.0% | |
| CACTATGGTCATGGAGAAGC+AGG | + | chr3_2:44360856-44360875 | Msa0407050:CDS | 50.0% | |
| TTGTCGCCATAACTGCACCA+AGG | + | chr3_2:44361266-44361285 | Msa0407050:intron | 50.0% | |
| ! | TCCATGCCTTGGTGCAGTTA+TGG | - | chr3_2:44361275-44361294 | None:intergenic | 50.0% |
| ATAACTGCACCAAGGCATGG+AGG | + | chr3_2:44361274-44361293 | Msa0407050:intron | 50.0% | |
| ! | TGGCATACAAGCATGGACTG+TGG | - | chr3_2:44361361-44361380 | None:intergenic | 50.0% |
| TGATAACACTGCTCTGTCCG+AGG | + | chr3_2:44361418-44361437 | Msa0407050:intron | 50.0% | |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | + | chr3_2:44361599-44361618 | Msa0407050:intron | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | - | chr3_2:44361604-44361623 | None:intergenic | 50.0% | |
| TGCAACTGCAGTTGTGATGG+CGG | + | chr3_2:44361746-44361765 | Msa0407050:intron | 50.0% | |
| !! | ACTTAGACTTGCTGGGATGC+TGG | - | chr3_2:44361997-44362016 | None:intergenic | 50.0% |
| CATCCCAGCAAGTCTAAGTG+TGG | + | chr3_2:44361998-44362017 | Msa0407050:CDS | 50.0% | |
| TGTACCTATGCTCACGGGGT+TGG | + | chr3_2:44360478-44360497 | Msa0407050:CDS | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | + | chr3_2:44360488-44360507 | Msa0407050:CDS | 55.0% |
| TAAGGAAGCCACCGCCGAAT+TGG | + | chr3_2:44360506-44360525 | Msa0407050:CDS | 55.0% | |
| GCTAGCACCTTCCAATTCGG+CGG | - | chr3_2:44360520-44360539 | None:intergenic | 55.0% | |
| !! | CCGAATTGGAAGGTGCTAGC+TGG | + | chr3_2:44360520-44360539 | Msa0407050:CDS | 55.0% |
| GGTCTGTGAACAAGCCAGCA+AGG | + | chr3_2:44360761-44360780 | Msa0407050:CDS | 55.0% | |
| CGCCCTGTTTGCTTCCACAT+GGG | - | chr3_2:44360814-44360833 | None:intergenic | 55.0% | |
| ACGCCCTGTTTGCTTCCACA+TGG | - | chr3_2:44360815-44360834 | None:intergenic | 55.0% | |
| !! | CAAACAGGGCGTTGTCCCTT+TGG | + | chr3_2:44360823-44360842 | Msa0407050:CDS | 55.0% |
| !! | AACAGGGCGTTGTCCCTTTG+GGG | + | chr3_2:44360825-44360844 | Msa0407050:CDS | 55.0% |
| GCCATAACTGCACCAAGGCA+TGG | + | chr3_2:44361271-44361290 | Msa0407050:intron | 55.0% | |
| GCACAACATCCTCCATGCCT+TGG | - | chr3_2:44361286-44361305 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | - | chr3_2:44361354-44361373 | None:intergenic | 55.0% |
| TGTACCTATGCTCACGGGGT+TGG | + | chr3_2:44360478-44360497 | Msa0407050:CDS | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | + | chr3_2:44360488-44360507 | Msa0407050:CDS | 55.0% |
| TAAGGAAGCCACCGCCGAAT+TGG | + | chr3_2:44360506-44360525 | Msa0407050:CDS | 55.0% | |
| GCTAGCACCTTCCAATTCGG+CGG | - | chr3_2:44360520-44360539 | None:intergenic | 55.0% | |
| !! | CCGAATTGGAAGGTGCTAGC+TGG | + | chr3_2:44360520-44360539 | Msa0407050:CDS | 55.0% |
| GGTCTGTGAACAAGCCAGCA+AGG | + | chr3_2:44360761-44360780 | Msa0407050:CDS | 55.0% | |
| CGCCCTGTTTGCTTCCACAT+GGG | - | chr3_2:44360814-44360833 | None:intergenic | 55.0% | |
| ACGCCCTGTTTGCTTCCACA+TGG | - | chr3_2:44360815-44360834 | None:intergenic | 55.0% | |
| !! | CAAACAGGGCGTTGTCCCTT+TGG | + | chr3_2:44360823-44360842 | Msa0407050:CDS | 55.0% |
| !! | AACAGGGCGTTGTCCCTTTG+GGG | + | chr3_2:44360825-44360844 | Msa0407050:CDS | 55.0% |
| GCCATAACTGCACCAAGGCA+TGG | + | chr3_2:44361271-44361290 | Msa0407050:intron | 55.0% | |
| GCACAACATCCTCCATGCCT+TGG | - | chr3_2:44361286-44361305 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | - | chr3_2:44361354-44361373 | None:intergenic | 55.0% |
| CTCACCAACCCCGTGAGCAT+AGG | - | chr3_2:44360485-44360504 | None:intergenic | 60.0% | |
| GAAGCCACCGCCGAATTGGA+AGG | + | chr3_2:44360510-44360529 | Msa0407050:CDS | 60.0% | |
| AGCACCTTCCAATTCGGCGG+TGG | - | chr3_2:44360517-44360536 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAACGAGGAA+TGG | + | chr3_2:44360539-44360558 | Msa0407050:CDS | 60.0% |
| GATGTTGTGCCAGCCGCCAT+AGG | + | chr3_2:44361296-44361315 | Msa0407050:intron | 60.0% | |
| CCATTGTAGCCTATGGCGGC+TGG | - | chr3_2:44361308-44361327 | None:intergenic | 60.0% | |
| CCAGCCGCCATAGGCTACAA+TGG | + | chr3_2:44361305-44361324 | Msa0407050:intron | 60.0% | |
| CTCACCAACCCCGTGAGCAT+AGG | - | chr3_2:44360485-44360504 | None:intergenic | 60.0% | |
| GAAGCCACCGCCGAATTGGA+AGG | + | chr3_2:44360510-44360529 | Msa0407050:CDS | 60.0% | |
| AGCACCTTCCAATTCGGCGG+TGG | - | chr3_2:44360517-44360536 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAACGAGGAA+TGG | + | chr3_2:44360539-44360558 | Msa0407050:CDS | 60.0% |
| GATGTTGTGCCAGCCGCCAT+AGG | + | chr3_2:44361296-44361315 | Msa0407050:intron | 60.0% | |
| CCATTGTAGCCTATGGCGGC+TGG | - | chr3_2:44361308-44361327 | None:intergenic | 60.0% | |
| CCAGCCGCCATAGGCTACAA+TGG | + | chr3_2:44361305-44361324 | Msa0407050:intron | 60.0% | |
| ! | GCTAGCTGGCTCTCGCAACG+AGG | + | chr3_2:44360534-44360553 | Msa0407050:CDS | 65.0% |
| !! | AGGGCGTTGTCCCTTTGGGG+AGG | + | chr3_2:44360828-44360847 | Msa0407050:CDS | 65.0% |
| ! | GCTAGCTGGCTCTCGCAACG+AGG | + | chr3_2:44360534-44360553 | Msa0407050:CDS | 65.0% |
| !! | AGGGCGTTGTCCCTTTGGGG+AGG | + | chr3_2:44360828-44360847 | Msa0407050:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 44360304 | 44362136 | 44360304 | ID=Msa0407050;Name=Msa0407050 |
| chr3_2 | mRNA | 44360304 | 44362136 | 44360304 | ID=Msa0407050-mRNA-1;Parent=Msa0407050;Name=Msa0407050-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|0|0|2|0|256 |
| chr3_2 | exon | 44360304 | 44360910 | 44360304 | ID=Msa0407050-mRNA-1:exon:8568;Parent=Msa0407050-mRNA-1 |
| chr3_2 | exon | 44361973 | 44362136 | 44361973 | ID=Msa0407050-mRNA-1:exon:8569;Parent=Msa0407050-mRNA-1 |
| chr3_2 | CDS | 44360304 | 44360910 | 44360304 | ID=Msa0407050-mRNA-1:cds;Parent=Msa0407050-mRNA-1 |
| chr3_2 | CDS | 44361973 | 44362136 | 44361973 | ID=Msa0407050-mRNA-1:cds;Parent=Msa0407050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
