Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407100 | XP_003600003.2 | 76.448 | 259 | 37 | 2 | 10 | 268 | 1 | 235 | 4.77e-139 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407100 | sp|Q9LT81|C3H39_ARATH | 37.370 | 289 | 120 | 9 | 32 | 264 | 93 | 376 | 2.89e-49 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407100 | G7J1X0 | 76.448 | 259 | 37 | 2 | 10 | 268 | 1 | 235 | 2.28e-139 | 401 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0407100 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407100 | MtrunA17_Chr3g0098251 | 76.214 | 206 | 38 | 2 | 10 | 215 | 1 | 195 | 2.26e-109 | 314 |
| Msa0407100 | MtrunA17_Chr4g0063401 | 57.561 | 205 | 61 | 6 | 16 | 195 | 44 | 247 | 5.95e-71 | 218 |
| Msa0407100 | MtrunA17_Chr8g0360671 | 76.056 | 142 | 12 | 3 | 64 | 198 | 40 | 166 | 3.70e-69 | 211 |
| Msa0407100 | MtrunA17_Chr4g0063361 | 50.476 | 210 | 92 | 4 | 5 | 202 | 39 | 248 | 3.11e-65 | 204 |
| Msa0407100 | MtrunA17_Chr4g0063391 | 48.585 | 212 | 86 | 5 | 1 | 194 | 1 | 207 | 1.94e-58 | 186 |
| Msa0407100 | MtrunA17_Chr4g0063371 | 40.071 | 282 | 95 | 8 | 1 | 260 | 1 | 230 | 5.12e-49 | 161 |
| Msa0407100 | MtrunA17_Chr8g0366501 | 27.740 | 292 | 141 | 5 | 37 | 261 | 86 | 374 | 3.69e-29 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0407100 | AT3G19360.1 | 37.370 | 289 | 120 | 9 | 32 | 264 | 93 | 376 | 2.93e-50 | 169 |
| Msa0407100 | AT3G19360.2 | 37.370 | 289 | 120 | 9 | 32 | 264 | 93 | 376 | 2.93e-50 | 169 |
| Msa0407100 | AT1G32360.1 | 27.632 | 304 | 135 | 7 | 37 | 261 | 85 | 382 | 4.61e-25 | 102 |
Find 81 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGAATGGATGCAGTTTC+TGG | 0.186612 | 3_2:-44483134 | Msa0407100:CDS |
| ATTCTTGCCCTCTTGTTCTT+TGG | 0.226992 | 3_2:+44483358 | None:intergenic |
| CGGAGATGGTTCTAATAGTT+TGG | 0.293400 | 3_2:-44482957 | Msa0407100:CDS |
| TCCTCTGCACTTGGCTAGTT+GGG | 0.297541 | 3_2:+44481557 | None:intergenic |
| ATAGACTTAGGGATGATTCT+TGG | 0.310304 | 3_2:-44483018 | Msa0407100:CDS |
| TTTGCCACACTTAGACTTGC+TGG | 0.314187 | 3_2:+44481683 | None:intergenic |
| AAACAGGGCGTTGTCCCTTT+GGG | 0.321190 | 3_2:-44482862 | Msa0407100:CDS |
| CTCGTATTTGTCATAAGTTC+AGG | 0.326388 | 3_2:-44483258 | Msa0407100:CDS |
| ACCAAATGTCTTGCTAGTTT+CGG | 0.331787 | 3_2:-44481729 | Msa0407100:CDS |
| TTACAGTAAGTGCCCCTTGC+TGG | 0.339223 | 3_2:+44482911 | None:intergenic |
| TTAATACTATATATGTTGAT+TGG | 0.349170 | 3_2:-44481604 | Msa0407100:CDS |
| CTCCTCTGCACTTGGCTAGT+TGG | 0.355356 | 3_2:+44481556 | None:intergenic |
| CAAACAGGGCGTTGTCCCTT+TGG | 0.358171 | 3_2:-44482863 | Msa0407100:CDS |
| TAAGGAAGCCACCGCCGAAT+TGG | 0.369861 | 3_2:-44483180 | Msa0407100:CDS |
| TTTGGGGAGTCCTGTCACTA+TGG | 0.373484 | 3_2:-44482845 | Msa0407100:CDS |
| GGTAATGATAATACTGGTAT+TGG | 0.385978 | 3_2:-44482809 | Msa0407100:CDS |
| TCGCCTGTTTCTTTGTTTGA+TGG | 0.390448 | 3_2:+44483295 | None:intergenic |
| AGACTTGCTGGGATGCTTGT+AGG | 0.406856 | 3_2:+44481695 | None:intergenic |
| TGTCCCATGTGGAAGCAAAC+AGG | 0.413714 | 3_2:-44482878 | Msa0407100:CDS |
| CTAATAGTTTGGAAGGCAAC+AGG | 0.423700 | 3_2:-44482946 | Msa0407100:CDS |
| ATGATATCGCTGTGGTGGTC+TGG | 0.425060 | 3_2:+44483385 | None:intergenic |
| CCAGCTAGCACCTTCCAATT+CGG | 0.426960 | 3_2:+44483166 | None:intergenic |
| ATTTGTCATAAGTTCAGGTT+TGG | 0.439137 | 3_2:-44483253 | Msa0407100:CDS |
| TTTAATTTCCACCAAAGTAA+AGG | 0.443077 | 3_2:+44481635 | None:intergenic |
| CTTCCATCAAACAAAGAAAC+AGG | 0.444809 | 3_2:-44483298 | Msa0407100:CDS |
| TTGCCACACTTAGACTTGCT+GGG | 0.445723 | 3_2:+44481684 | None:intergenic |
| GCCGAAACTAGCAAGACATT+TGG | 0.446313 | 3_2:+44481728 | None:intergenic |
| AATGGTGAGGAATGTCCTTA+TGG | 0.454214 | 3_2:-44483061 | Msa0407100:CDS |
| GTTTCTTTGTTTGATGGAAG+AGG | 0.456265 | 3_2:+44483301 | None:intergenic |
| CACTATGGTCATGGAGAAGC+AGG | 0.459706 | 3_2:-44482830 | Msa0407100:CDS |
| AGACGAAGCCTTTACTTTGG+TGG | 0.462105 | 3_2:-44481643 | Msa0407100:CDS |
| CAGAAAATCATTCACAAGAT+GGG | 0.463529 | 3_2:-44483103 | Msa0407100:CDS |
| GGCTAGTTGGGTAGAATAAG+AGG | 0.468838 | 3_2:+44481569 | None:intergenic |
| GAAGCAGGTAATGATAATAC+TGG | 0.469875 | 3_2:-44482815 | Msa0407100:CDS |
| AGCACCTTCCAATTCGGCGG+TGG | 0.473982 | 3_2:+44483172 | None:intergenic |
| CTGGCTCTCGCAACGAGGAA+TGG | 0.475242 | 3_2:-44483147 | Msa0407100:CDS |
| TCAGAAAATCATTCACAAGA+TGG | 0.481007 | 3_2:-44483104 | Msa0407100:CDS |
| CTCACGGGGTTGGTGAGATA+AGG | 0.482058 | 3_2:-44483198 | Msa0407100:CDS |
| CCGAATTGGAAGGTGCTAGC+TGG | 0.485538 | 3_2:-44483166 | Msa0407100:CDS |
| TTTCTTTGTTTGATGGAAGA+GGG | 0.487321 | 3_2:+44483302 | None:intergenic |
| GATGCTTGTAGGTGCATCAT+TGG | 0.488672 | 3_2:+44481706 | None:intergenic |
| TAGGTACAATGTTCACCTTT+CGG | 0.492110 | 3_2:+44483223 | None:intergenic |
| AAACAACACTTATCACCATA+AGG | 0.495083 | 3_2:+44483046 | None:intergenic |
| TCTAAGTGTGGCAAAGGAAG+TGG | 0.499183 | 3_2:-44481675 | Msa0407100:CDS |
| CGCCCTGTTTGCTTCCACAT+GGG | 0.499410 | 3_2:+44482875 | None:intergenic |
| CTAAGACGAAGCCTTTACTT+TGG | 0.500430 | 3_2:-44481646 | Msa0407100:CDS |
| ACTTCCAATGTTTAATGCAC+AGG | 0.503756 | 3_2:+44482982 | None:intergenic |
| AACATTGTACCTATGCTCAC+GGG | 0.508915 | 3_2:-44483213 | Msa0407100:CDS |
| GTCTGTGAACAAGCCAGCAA+GGG | 0.530594 | 3_2:-44482924 | Msa0407100:CDS |
| GATGGTTCTAATAGTTTGGA+AGG | 0.532918 | 3_2:-44482953 | Msa0407100:CDS |
| GGTCTGTGAACAAGCCAGCA+AGG | 0.544982 | 3_2:-44482925 | Msa0407100:CDS |
| TGTACCTATGCTCACGGGGT+TGG | 0.546278 | 3_2:-44483208 | Msa0407100:CDS |
| GAGTCCTGTCACTATGGTCA+TGG | 0.547011 | 3_2:-44482839 | Msa0407100:CDS |
| GCATTAAACATTGGAAGTAT+CGG | 0.556102 | 3_2:-44482977 | Msa0407100:CDS |
| AGCAAGTCTAAGTGTGGCAA+AGG | 0.556244 | 3_2:-44481681 | Msa0407100:CDS |
| AACAGGGCGTTGTCCCTTTG+GGG | 0.558687 | 3_2:-44482861 | Msa0407100:CDS |
| AGGTTTGGTAATTGTCCGAA+AGG | 0.564006 | 3_2:-44483238 | Msa0407100:CDS |
| ACGCCCTGTTTGCTTCCACA+TGG | 0.564079 | 3_2:+44482874 | None:intergenic |
| AACATTGGAAGTATCGGAGA+TGG | 0.569972 | 3_2:-44482971 | Msa0407100:CDS |
| TTCTCCATGACCATAGTGAC+AGG | 0.577543 | 3_2:+44482835 | None:intergenic |
| TAGTGACAGGACTCCCCAAA+GGG | 0.578256 | 3_2:+44482848 | None:intergenic |
| GAACATTGTACCTATGCTCA+CGG | 0.579167 | 3_2:-44483214 | Msa0407100:CDS |
| GAAGCCACCGCCGAATTGGA+AGG | 0.590951 | 3_2:-44483176 | Msa0407100:CDS |
| TCATGTTTCCAAAGAACAAG+AGG | 0.592600 | 3_2:-44483366 | Msa0407100:CDS |
| GTCCCATGTGGAAGCAAACA+GGG | 0.595288 | 3_2:-44482877 | Msa0407100:CDS |
| AGAAAATCATTCACAAGATG+GGG | 0.602501 | 3_2:-44483102 | Msa0407100:CDS |
| GAGGCCTGTGCATTAAACAT+TGG | 0.604839 | 3_2:-44482986 | Msa0407100:CDS |
| CTCACCAACCCCGTGAGCAT+AGG | 0.617079 | 3_2:+44483204 | None:intergenic |
| GCTAGCACCTTCCAATTCGG+CGG | 0.643744 | 3_2:+44483169 | None:intergenic |
| CATGTTTCCAAAGAACAAGA+GGG | 0.650159 | 3_2:-44483365 | Msa0407100:CDS |
| TCTGTGAACAAGCCAGCAAG+GGG | 0.662860 | 3_2:-44482923 | Msa0407100:CDS |
| CATCCCAGCAAGTCTAAGTG+TGG | 0.664369 | 3_2:-44481687 | Msa0407100:CDS |
| ATAGTGACAGGACTCCCCAA+AGG | 0.664922 | 3_2:+44482847 | None:intergenic |
| CAAGAAATACTACAATGGTG+AGG | 0.666991 | 3_2:-44483074 | Msa0407100:CDS |
| CTATGCAAGAAATACTACAA+TGG | 0.669884 | 3_2:-44483079 | Msa0407100:CDS |
| GAAACATGATATCGCTGTGG+TGG | 0.671066 | 3_2:+44483380 | None:intergenic |
| TGATTCTTGGAAATCAAGAG+AGG | 0.676002 | 3_2:-44483005 | Msa0407100:CDS |
| ACATTGTACCTATGCTCACG+GGG | 0.692970 | 3_2:-44483212 | Msa0407100:CDS |
| AGACTAAGCTGTGTCCCATG+TGG | 0.715051 | 3_2:-44482889 | Msa0407100:CDS |
| GCTAGCTGGCTCTCGCAACG+AGG | 0.720200 | 3_2:-44483152 | Msa0407100:CDS |
| TTGGAAACATGATATCGCTG+TGG | 0.734366 | 3_2:+44483377 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAATATTTTATACTAGATA+GGG | - | chr3_2:44482814-44482833 | Msa0407100:CDS | 15.0% |
| !! | TTAATACTATATATGTTGAT+TGG | - | chr3_2:44483361-44483380 | Msa0407100:CDS | 15.0% |
| !!! | ACAATATTTTATACTAGATA+GGG | - | chr3_2:44482814-44482833 | Msa0407100:CDS | 15.0% |
| !! | TTAATACTATATATGTTGAT+TGG | - | chr3_2:44483361-44483380 | Msa0407100:CDS | 15.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | + | chr3_2:44482807-44482826 | None:intergenic | 20.0% |
| !!! | CACAATATTTTATACTAGAT+AGG | - | chr3_2:44482813-44482832 | Msa0407100:CDS | 20.0% |
| !! | TTATAACAATCAAATCTGTT+TGG | - | chr3_2:44483176-44483195 | Msa0407100:CDS | 20.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | + | chr3_2:44482807-44482826 | None:intergenic | 20.0% |
| !!! | CACAATATTTTATACTAGAT+AGG | - | chr3_2:44482813-44482832 | Msa0407100:CDS | 20.0% |
| !! | TTATAACAATCAAATCTGTT+TGG | - | chr3_2:44483176-44483195 | Msa0407100:CDS | 20.0% |
| !! | TTGTTTTCTTCATAGACTTA+GGG | - | chr3_2:44481936-44481955 | Msa0407100:intron | 25.0% |
| ! | TACTTGCTTATAGTTAAAGT+TGG | - | chr3_2:44482411-44482430 | Msa0407100:intron | 25.0% |
| ! | TGAATGAACAAAATACCAAA+TGG | + | chr3_2:44482447-44482466 | None:intergenic | 25.0% |
| ! | TTATACTAGATAGGGTATAA+TGG | - | chr3_2:44482822-44482841 | Msa0407100:CDS | 25.0% |
| !! | TTTAATTTCCACCAAAGTAA+AGG | + | chr3_2:44483333-44483352 | None:intergenic | 25.0% |
| !! | TTGTTTTCTTCATAGACTTA+GGG | - | chr3_2:44481936-44481955 | Msa0407100:intron | 25.0% |
| ! | TACTTGCTTATAGTTAAAGT+TGG | - | chr3_2:44482411-44482430 | Msa0407100:intron | 25.0% |
| ! | TGAATGAACAAAATACCAAA+TGG | + | chr3_2:44482447-44482466 | None:intergenic | 25.0% |
| ! | TTATACTAGATAGGGTATAA+TGG | - | chr3_2:44482822-44482841 | Msa0407100:CDS | 25.0% |
| !! | TTTAATTTCCACCAAAGTAA+AGG | + | chr3_2:44483333-44483352 | None:intergenic | 25.0% |
| ! | TTTCTTTGTTTGATGGAAGA+GGG | + | chr3_2:44481666-44481685 | None:intergenic | 30.0% |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | - | chr3_2:44481712-44481731 | Msa0407100:CDS | 30.0% |
| TCAGAAAATCATTCACAAGA+TGG | - | chr3_2:44481861-44481880 | Msa0407100:intron | 30.0% | |
| CAGAAAATCATTCACAAGAT+GGG | - | chr3_2:44481862-44481881 | Msa0407100:intron | 30.0% | |
| AGAAAATCATTCACAAGATG+GGG | - | chr3_2:44481863-44481882 | Msa0407100:intron | 30.0% | |
| CTATGCAAGAAATACTACAA+TGG | - | chr3_2:44481886-44481905 | Msa0407100:intron | 30.0% | |
| AAACAACACTTATCACCATA+AGG | + | chr3_2:44481922-44481941 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCTTCATAGACTT+AGG | - | chr3_2:44481935-44481954 | Msa0407100:intron | 30.0% |
| ! | GCATTAAACATTGGAAGTAT+CGG | - | chr3_2:44481988-44482007 | Msa0407100:intron | 30.0% |
| GGTAATGATAATACTGGTAT+TGG | - | chr3_2:44482156-44482175 | Msa0407100:intron | 30.0% | |
| ! | GTAATTCTACTGTTCTGTTT+TGG | - | chr3_2:44482190-44482209 | Msa0407100:intron | 30.0% |
| TTATAGTGTTTGATTGTGTG+TGG | - | chr3_2:44482293-44482312 | Msa0407100:intron | 30.0% | |
| ! | GTGTGTCATATTTTCATGTT+TGG | - | chr3_2:44482327-44482346 | Msa0407100:intron | 30.0% |
| AGGTAGCTGATCATATTAAA+TGG | - | chr3_2:44482376-44482395 | Msa0407100:intron | 30.0% | |
| TGAGTAATCATACATACAAG+TGG | + | chr3_2:44482501-44482520 | None:intergenic | 30.0% | |
| TAACAACAGTATGTAAACCT+CGG | + | chr3_2:44482717-44482736 | None:intergenic | 30.0% | |
| ! | TTTCTTTGTTTGATGGAAGA+GGG | + | chr3_2:44481666-44481685 | None:intergenic | 30.0% |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | - | chr3_2:44481712-44481731 | Msa0407100:CDS | 30.0% |
| TCAGAAAATCATTCACAAGA+TGG | - | chr3_2:44481861-44481880 | Msa0407100:intron | 30.0% | |
| CAGAAAATCATTCACAAGAT+GGG | - | chr3_2:44481862-44481881 | Msa0407100:intron | 30.0% | |
| AGAAAATCATTCACAAGATG+GGG | - | chr3_2:44481863-44481882 | Msa0407100:intron | 30.0% | |
| CTATGCAAGAAATACTACAA+TGG | - | chr3_2:44481886-44481905 | Msa0407100:intron | 30.0% | |
| AAACAACACTTATCACCATA+AGG | + | chr3_2:44481922-44481941 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCTTCATAGACTT+AGG | - | chr3_2:44481935-44481954 | Msa0407100:intron | 30.0% |
| ! | GCATTAAACATTGGAAGTAT+CGG | - | chr3_2:44481988-44482007 | Msa0407100:intron | 30.0% |
| GGTAATGATAATACTGGTAT+TGG | - | chr3_2:44482156-44482175 | Msa0407100:intron | 30.0% | |
| ! | GTAATTCTACTGTTCTGTTT+TGG | - | chr3_2:44482190-44482209 | Msa0407100:intron | 30.0% |
| TTATAGTGTTTGATTGTGTG+TGG | - | chr3_2:44482293-44482312 | Msa0407100:intron | 30.0% | |
| ! | GTGTGTCATATTTTCATGTT+TGG | - | chr3_2:44482327-44482346 | Msa0407100:intron | 30.0% |
| AGGTAGCTGATCATATTAAA+TGG | - | chr3_2:44482376-44482395 | Msa0407100:intron | 30.0% | |
| TGAGTAATCATACATACAAG+TGG | + | chr3_2:44482501-44482520 | None:intergenic | 30.0% | |
| TAACAACAGTATGTAAACCT+CGG | + | chr3_2:44482717-44482736 | None:intergenic | 30.0% | |
| TCATGTTTCCAAAGAACAAG+AGG | - | chr3_2:44481599-44481618 | Msa0407100:CDS | 35.0% | |
| CATGTTTCCAAAGAACAAGA+GGG | - | chr3_2:44481600-44481619 | Msa0407100:CDS | 35.0% | |
| ! | GTTTCTTTGTTTGATGGAAG+AGG | + | chr3_2:44481667-44481686 | None:intergenic | 35.0% |
| CTTCCATCAAACAAAGAAAC+AGG | - | chr3_2:44481667-44481686 | Msa0407100:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | - | chr3_2:44481707-44481726 | Msa0407100:CDS | 35.0% | |
| TAGGTACAATGTTCACCTTT+CGG | + | chr3_2:44481745-44481764 | None:intergenic | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | - | chr3_2:44481891-44481910 | Msa0407100:intron | 35.0% | |
| ATAGACTTAGGGATGATTCT+TGG | - | chr3_2:44481947-44481966 | Msa0407100:intron | 35.0% | |
| TGATTCTTGGAAATCAAGAG+AGG | - | chr3_2:44481960-44481979 | Msa0407100:intron | 35.0% | |
| ACTTCCAATGTTTAATGCAC+AGG | + | chr3_2:44481986-44482005 | None:intergenic | 35.0% | |
| !! | GATGGTTCTAATAGTTTGGA+AGG | - | chr3_2:44482012-44482031 | Msa0407100:intron | 35.0% |
| GAAGCAGGTAATGATAATAC+TGG | - | chr3_2:44482150-44482169 | Msa0407100:intron | 35.0% | |
| TATGATCAGCTACCTTAAGA+GGG | + | chr3_2:44482371-44482390 | None:intergenic | 35.0% | |
| ATATGATCAGCTACCTTAAG+AGG | + | chr3_2:44482372-44482391 | None:intergenic | 35.0% | |
| !! | GTTGGTTCTGAATAACCATT+TGG | - | chr3_2:44482429-44482448 | Msa0407100:intron | 35.0% |
| ATAATAGCCATTGTAGCCTA+TGG | + | chr3_2:44482594-44482613 | None:intergenic | 35.0% | |
| AAAAATCTGGCATACAAGCA+TGG | + | chr3_2:44482647-44482666 | None:intergenic | 35.0% | |
| ! | ATGCTTGTATGCCAGATTTT+TGG | - | chr3_2:44482646-44482665 | Msa0407100:intron | 35.0% |
| TGTTATCATAAGTGGAAGGA+AGG | + | chr3_2:44482685-44482704 | None:intergenic | 35.0% | |
| TAGAGCAGTGTTATCATAAG+TGG | + | chr3_2:44482693-44482712 | None:intergenic | 35.0% | |
| CTGTTGTTAATTGTAGATCG+CGG | - | chr3_2:44482728-44482747 | Msa0407100:intron | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | + | chr3_2:44482886-44482905 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | + | chr3_2:44482896-44482915 | None:intergenic | 35.0% | |
| TGTCTGACTCATCAATAAGT+TGG | - | chr3_2:44482927-44482946 | Msa0407100:CDS | 35.0% | |
| TATGTTTGACTGCAACGTTA+CGG | + | chr3_2:44483000-44483019 | None:intergenic | 35.0% | |
| AAGAGTCAGAAGAAGATACA+AGG | + | chr3_2:44483205-44483224 | None:intergenic | 35.0% | |
| ! | ACCAAATGTCTTGCTAGTTT+CGG | - | chr3_2:44483236-44483255 | Msa0407100:CDS | 35.0% |
| TCATGTTTCCAAAGAACAAG+AGG | - | chr3_2:44481599-44481618 | Msa0407100:CDS | 35.0% | |
| CATGTTTCCAAAGAACAAGA+GGG | - | chr3_2:44481600-44481619 | Msa0407100:CDS | 35.0% | |
| ! | GTTTCTTTGTTTGATGGAAG+AGG | + | chr3_2:44481667-44481686 | None:intergenic | 35.0% |
| CTTCCATCAAACAAAGAAAC+AGG | - | chr3_2:44481667-44481686 | Msa0407100:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | - | chr3_2:44481707-44481726 | Msa0407100:CDS | 35.0% | |
| TAGGTACAATGTTCACCTTT+CGG | + | chr3_2:44481745-44481764 | None:intergenic | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | - | chr3_2:44481891-44481910 | Msa0407100:intron | 35.0% | |
| ATAGACTTAGGGATGATTCT+TGG | - | chr3_2:44481947-44481966 | Msa0407100:intron | 35.0% | |
| TGATTCTTGGAAATCAAGAG+AGG | - | chr3_2:44481960-44481979 | Msa0407100:intron | 35.0% | |
| ACTTCCAATGTTTAATGCAC+AGG | + | chr3_2:44481986-44482005 | None:intergenic | 35.0% | |
| !! | GATGGTTCTAATAGTTTGGA+AGG | - | chr3_2:44482012-44482031 | Msa0407100:intron | 35.0% |
| GAAGCAGGTAATGATAATAC+TGG | - | chr3_2:44482150-44482169 | Msa0407100:intron | 35.0% | |
| TATGATCAGCTACCTTAAGA+GGG | + | chr3_2:44482371-44482390 | None:intergenic | 35.0% | |
| ATATGATCAGCTACCTTAAG+AGG | + | chr3_2:44482372-44482391 | None:intergenic | 35.0% | |
| !! | GTTGGTTCTGAATAACCATT+TGG | - | chr3_2:44482429-44482448 | Msa0407100:intron | 35.0% |
| ATAATAGCCATTGTAGCCTA+TGG | + | chr3_2:44482594-44482613 | None:intergenic | 35.0% | |
| AAAAATCTGGCATACAAGCA+TGG | + | chr3_2:44482647-44482666 | None:intergenic | 35.0% | |
| ! | ATGCTTGTATGCCAGATTTT+TGG | - | chr3_2:44482646-44482665 | Msa0407100:intron | 35.0% |
| TGTTATCATAAGTGGAAGGA+AGG | + | chr3_2:44482685-44482704 | None:intergenic | 35.0% | |
| TAGAGCAGTGTTATCATAAG+TGG | + | chr3_2:44482693-44482712 | None:intergenic | 35.0% | |
| CTGTTGTTAATTGTAGATCG+CGG | - | chr3_2:44482728-44482747 | Msa0407100:intron | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | + | chr3_2:44482886-44482905 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | + | chr3_2:44482896-44482915 | None:intergenic | 35.0% | |
| TGTCTGACTCATCAATAAGT+TGG | - | chr3_2:44482927-44482946 | Msa0407100:CDS | 35.0% | |
| TATGTTTGACTGCAACGTTA+CGG | + | chr3_2:44483000-44483019 | None:intergenic | 35.0% | |
| AAGAGTCAGAAGAAGATACA+AGG | + | chr3_2:44483205-44483224 | None:intergenic | 35.0% | |
| ! | ACCAAATGTCTTGCTAGTTT+CGG | - | chr3_2:44483236-44483255 | Msa0407100:CDS | 35.0% |
| TTGGAAACATGATATCGCTG+TGG | + | chr3_2:44481591-44481610 | None:intergenic | 40.0% | |
| ATTCTTGCCCTCTTGTTCTT+TGG | + | chr3_2:44481610-44481629 | None:intergenic | 40.0% | |
| ! | TCGCCTGTTTCTTTGTTTGA+TGG | + | chr3_2:44481673-44481692 | None:intergenic | 40.0% |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | - | chr3_2:44481727-44481746 | Msa0407100:CDS | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | - | chr3_2:44481751-44481770 | Msa0407100:intron | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | - | chr3_2:44481752-44481771 | Msa0407100:intron | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | - | chr3_2:44481904-44481923 | Msa0407100:intron | 40.0% | |
| !! | AACATTGGAAGTATCGGAGA+TGG | - | chr3_2:44481994-44482013 | Msa0407100:intron | 40.0% |
| !! | CGGAGATGGTTCTAATAGTT+TGG | - | chr3_2:44482008-44482027 | Msa0407100:intron | 40.0% |
| CTAATAGTTTGGAAGGCAAC+AGG | - | chr3_2:44482019-44482038 | Msa0407100:intron | 40.0% | |
| ACATAAACTTGCCCCTCTTA+AGG | - | chr3_2:44482356-44482375 | Msa0407100:intron | 40.0% | |
| ATGATCAGCTACCTTAAGAG+GGG | + | chr3_2:44482370-44482389 | None:intergenic | 40.0% | |
| GCAGTGTTATCATAAGTGGA+AGG | + | chr3_2:44482689-44482708 | None:intergenic | 40.0% | |
| GCAATAGAATTGTTGTGCAG+CGG | + | chr3_2:44482776-44482795 | None:intergenic | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | + | chr3_2:44482887-44482906 | None:intergenic | 40.0% | |
| ! | CTGACTCATCAATAAGTTGG+AGG | - | chr3_2:44482930-44482949 | Msa0407100:CDS | 40.0% |
| GAGGTACATTTCTCATTGCA+AGG | - | chr3_2:44482949-44482968 | Msa0407100:CDS | 40.0% | |
| TAATGCAACTGCAGTTGTGA+TGG | - | chr3_2:44483022-44483041 | Msa0407100:CDS | 40.0% | |
| !! | TAACGTTTTAGCCACAATCG+TGG | - | chr3_2:44483063-44483082 | Msa0407100:CDS | 40.0% |
| AACATTTGCAACCACGATTG+TGG | + | chr3_2:44483077-44483096 | None:intergenic | 40.0% | |
| CTAAGACGAAGCCTTTACTT+TGG | - | chr3_2:44483319-44483338 | Msa0407100:CDS | 40.0% | |
| TTGGAAACATGATATCGCTG+TGG | + | chr3_2:44481591-44481610 | None:intergenic | 40.0% | |
| ATTCTTGCCCTCTTGTTCTT+TGG | + | chr3_2:44481610-44481629 | None:intergenic | 40.0% | |
| ! | TCGCCTGTTTCTTTGTTTGA+TGG | + | chr3_2:44481673-44481692 | None:intergenic | 40.0% |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | - | chr3_2:44481727-44481746 | Msa0407100:CDS | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | - | chr3_2:44481751-44481770 | Msa0407100:intron | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | - | chr3_2:44481752-44481771 | Msa0407100:intron | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | - | chr3_2:44481904-44481923 | Msa0407100:intron | 40.0% | |
| !! | AACATTGGAAGTATCGGAGA+TGG | - | chr3_2:44481994-44482013 | Msa0407100:intron | 40.0% |
| !! | CGGAGATGGTTCTAATAGTT+TGG | - | chr3_2:44482008-44482027 | Msa0407100:intron | 40.0% |
| CTAATAGTTTGGAAGGCAAC+AGG | - | chr3_2:44482019-44482038 | Msa0407100:intron | 40.0% | |
| ACATAAACTTGCCCCTCTTA+AGG | - | chr3_2:44482356-44482375 | Msa0407100:intron | 40.0% | |
| ATGATCAGCTACCTTAAGAG+GGG | + | chr3_2:44482370-44482389 | None:intergenic | 40.0% | |
| GCAGTGTTATCATAAGTGGA+AGG | + | chr3_2:44482689-44482708 | None:intergenic | 40.0% | |
| GCAATAGAATTGTTGTGCAG+CGG | + | chr3_2:44482776-44482795 | None:intergenic | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | + | chr3_2:44482887-44482906 | None:intergenic | 40.0% | |
| ! | CTGACTCATCAATAAGTTGG+AGG | - | chr3_2:44482930-44482949 | Msa0407100:CDS | 40.0% |
| GAGGTACATTTCTCATTGCA+AGG | - | chr3_2:44482949-44482968 | Msa0407100:CDS | 40.0% | |
| TAATGCAACTGCAGTTGTGA+TGG | - | chr3_2:44483022-44483041 | Msa0407100:CDS | 40.0% | |
| !! | TAACGTTTTAGCCACAATCG+TGG | - | chr3_2:44483063-44483082 | Msa0407100:CDS | 40.0% |
| AACATTTGCAACCACGATTG+TGG | + | chr3_2:44483077-44483096 | None:intergenic | 40.0% | |
| CTAAGACGAAGCCTTTACTT+TGG | - | chr3_2:44483319-44483338 | Msa0407100:CDS | 40.0% | |
| GAAACATGATATCGCTGTGG+TGG | + | chr3_2:44481588-44481607 | None:intergenic | 45.0% | |
| ACATTGTACCTATGCTCACG+GGG | - | chr3_2:44481753-44481772 | Msa0407100:intron | 45.0% | |
| GAGGCCTGTGCATTAAACAT+TGG | - | chr3_2:44481979-44481998 | Msa0407100:intron | 45.0% | |
| TTCTCCATGACCATAGTGAC+AGG | + | chr3_2:44482133-44482152 | None:intergenic | 45.0% | |
| ATAGCCATTGTAGCCTATGG+CGG | + | chr3_2:44482591-44482610 | None:intergenic | 45.0% | |
| ! | ATCCAGCATGTTTCTGCCAT+AGG | - | chr3_2:44482614-44482633 | Msa0407100:intron | 45.0% |
| ATGGCAGCTAGCCAAAAATC+TGG | + | chr3_2:44482660-44482679 | None:intergenic | 45.0% | |
| CATAAGTGGAAGGAAGGCTA+TGG | + | chr3_2:44482679-44482698 | None:intergenic | 45.0% | |
| TGATAACACTGCTCTATCCG+AGG | - | chr3_2:44482697-44482716 | Msa0407100:intron | 45.0% | |
| GTTATCACACGAAAACGAGC+AGG | + | chr3_2:44483110-44483129 | None:intergenic | 45.0% | |
| GCCGAAACTAGCAAGACATT+TGG | + | chr3_2:44483240-44483259 | None:intergenic | 45.0% | |
| GATGCTTGTAGGTGCATCAT+TGG | + | chr3_2:44483262-44483281 | None:intergenic | 45.0% | |
| ! | TTGCCACACTTAGACTTGCT+GGG | + | chr3_2:44483284-44483303 | None:intergenic | 45.0% |
| TTTGCCACACTTAGACTTGC+TGG | + | chr3_2:44483285-44483304 | None:intergenic | 45.0% | |
| AGCAAGTCTAAGTGTGGCAA+AGG | - | chr3_2:44483284-44483303 | Msa0407100:CDS | 45.0% | |
| TCTAAGTGTGGCAAAGGAAG+TGG | - | chr3_2:44483290-44483309 | Msa0407100:CDS | 45.0% | |
| AGACGAAGCCTTTACTTTGG+TGG | - | chr3_2:44483322-44483341 | Msa0407100:CDS | 45.0% | |
| GAAACATGATATCGCTGTGG+TGG | + | chr3_2:44481588-44481607 | None:intergenic | 45.0% | |
| ACATTGTACCTATGCTCACG+GGG | - | chr3_2:44481753-44481772 | Msa0407100:intron | 45.0% | |
| GAGGCCTGTGCATTAAACAT+TGG | - | chr3_2:44481979-44481998 | Msa0407100:intron | 45.0% | |
| TTCTCCATGACCATAGTGAC+AGG | + | chr3_2:44482133-44482152 | None:intergenic | 45.0% | |
| ATAGCCATTGTAGCCTATGG+CGG | + | chr3_2:44482591-44482610 | None:intergenic | 45.0% | |
| ! | ATCCAGCATGTTTCTGCCAT+AGG | - | chr3_2:44482614-44482633 | Msa0407100:intron | 45.0% |
| ATGGCAGCTAGCCAAAAATC+TGG | + | chr3_2:44482660-44482679 | None:intergenic | 45.0% | |
| CATAAGTGGAAGGAAGGCTA+TGG | + | chr3_2:44482679-44482698 | None:intergenic | 45.0% | |
| TGATAACACTGCTCTATCCG+AGG | - | chr3_2:44482697-44482716 | Msa0407100:intron | 45.0% | |
| GTTATCACACGAAAACGAGC+AGG | + | chr3_2:44483110-44483129 | None:intergenic | 45.0% | |
| GCCGAAACTAGCAAGACATT+TGG | + | chr3_2:44483240-44483259 | None:intergenic | 45.0% | |
| GATGCTTGTAGGTGCATCAT+TGG | + | chr3_2:44483262-44483281 | None:intergenic | 45.0% | |
| ! | TTGCCACACTTAGACTTGCT+GGG | + | chr3_2:44483284-44483303 | None:intergenic | 45.0% |
| TTTGCCACACTTAGACTTGC+TGG | + | chr3_2:44483285-44483304 | None:intergenic | 45.0% | |
| AGCAAGTCTAAGTGTGGCAA+AGG | - | chr3_2:44483284-44483303 | Msa0407100:CDS | 45.0% | |
| TCTAAGTGTGGCAAAGGAAG+TGG | - | chr3_2:44483290-44483309 | Msa0407100:CDS | 45.0% | |
| AGACGAAGCCTTTACTTTGG+TGG | - | chr3_2:44483322-44483341 | Msa0407100:CDS | 45.0% | |
| ATGATATCGCTGTGGTGGTC+TGG | + | chr3_2:44481583-44481602 | None:intergenic | 50.0% | |
| CCAGCTAGCACCTTCCAATT+CGG | + | chr3_2:44481802-44481821 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | - | chr3_2:44481831-44481850 | Msa0407100:intron | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | - | chr3_2:44482041-44482060 | Msa0407100:intron | 50.0% | |
| TCTGTGAACAAGCCAGCAAG+GGG | - | chr3_2:44482042-44482061 | Msa0407100:intron | 50.0% | |
| TTACAGTAAGTGCCCCTTGC+TGG | + | chr3_2:44482057-44482076 | None:intergenic | 50.0% | |
| AGACTAAGCTGTGTCCCATG+TGG | - | chr3_2:44482076-44482095 | Msa0407100:intron | 50.0% | |
| TGTCCCATGTGGAAGCAAAC+AGG | - | chr3_2:44482087-44482106 | Msa0407100:intron | 50.0% | |
| GTCCCATGTGGAAGCAAACA+GGG | - | chr3_2:44482088-44482107 | Msa0407100:intron | 50.0% | |
| !! | AAACAGGGCGTTGTCCCTTT+GGG | - | chr3_2:44482103-44482122 | Msa0407100:intron | 50.0% |
| TAGTGACAGGACTCCCCAAA+GGG | + | chr3_2:44482120-44482139 | None:intergenic | 50.0% | |
| ATAGTGACAGGACTCCCCAA+AGG | + | chr3_2:44482121-44482140 | None:intergenic | 50.0% | |
| TTTGGGGAGTCCTGTCACTA+TGG | - | chr3_2:44482120-44482139 | Msa0407100:intron | 50.0% | |
| GAGTCCTGTCACTATGGTCA+TGG | - | chr3_2:44482126-44482145 | Msa0407100:intron | 50.0% | |
| CACTATGGTCATGGAGAAGC+AGG | - | chr3_2:44482135-44482154 | Msa0407100:intron | 50.0% | |
| TTGTCGCCATAACTGCACCA+AGG | - | chr3_2:44482545-44482564 | Msa0407100:intron | 50.0% | |
| ! | TCCATGCCTTGGTGCAGTTA+TGG | + | chr3_2:44482554-44482573 | None:intergenic | 50.0% |
| ATAACTGCACCAAGGCATGG+AGG | - | chr3_2:44482553-44482572 | Msa0407100:intron | 50.0% | |
| ! | TGGCATACAAGCATGGACTG+TGG | + | chr3_2:44482640-44482659 | None:intergenic | 50.0% |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | - | chr3_2:44482878-44482897 | Msa0407100:CDS | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | + | chr3_2:44482883-44482902 | None:intergenic | 50.0% | |
| TGCAACTGCAGTTGTGATGG+CGG | - | chr3_2:44483025-44483044 | Msa0407100:CDS | 50.0% | |
| !! | AGACTTGCTGGGATGCTTGT+AGG | + | chr3_2:44483273-44483292 | None:intergenic | 50.0% |
| CATCCCAGCAAGTCTAAGTG+TGG | - | chr3_2:44483278-44483297 | Msa0407100:CDS | 50.0% | |
| ATGATATCGCTGTGGTGGTC+TGG | + | chr3_2:44481583-44481602 | None:intergenic | 50.0% | |
| CCAGCTAGCACCTTCCAATT+CGG | + | chr3_2:44481802-44481821 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | - | chr3_2:44481831-44481850 | Msa0407100:intron | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | - | chr3_2:44482041-44482060 | Msa0407100:intron | 50.0% | |
| TCTGTGAACAAGCCAGCAAG+GGG | - | chr3_2:44482042-44482061 | Msa0407100:intron | 50.0% | |
| TTACAGTAAGTGCCCCTTGC+TGG | + | chr3_2:44482057-44482076 | None:intergenic | 50.0% | |
| AGACTAAGCTGTGTCCCATG+TGG | - | chr3_2:44482076-44482095 | Msa0407100:intron | 50.0% | |
| TGTCCCATGTGGAAGCAAAC+AGG | - | chr3_2:44482087-44482106 | Msa0407100:intron | 50.0% | |
| GTCCCATGTGGAAGCAAACA+GGG | - | chr3_2:44482088-44482107 | Msa0407100:intron | 50.0% | |
| !! | AAACAGGGCGTTGTCCCTTT+GGG | - | chr3_2:44482103-44482122 | Msa0407100:intron | 50.0% |
| TAGTGACAGGACTCCCCAAA+GGG | + | chr3_2:44482120-44482139 | None:intergenic | 50.0% | |
| ATAGTGACAGGACTCCCCAA+AGG | + | chr3_2:44482121-44482140 | None:intergenic | 50.0% | |
| TTTGGGGAGTCCTGTCACTA+TGG | - | chr3_2:44482120-44482139 | Msa0407100:intron | 50.0% | |
| GAGTCCTGTCACTATGGTCA+TGG | - | chr3_2:44482126-44482145 | Msa0407100:intron | 50.0% | |
| CACTATGGTCATGGAGAAGC+AGG | - | chr3_2:44482135-44482154 | Msa0407100:intron | 50.0% | |
| TTGTCGCCATAACTGCACCA+AGG | - | chr3_2:44482545-44482564 | Msa0407100:intron | 50.0% | |
| ! | TCCATGCCTTGGTGCAGTTA+TGG | + | chr3_2:44482554-44482573 | None:intergenic | 50.0% |
| ATAACTGCACCAAGGCATGG+AGG | - | chr3_2:44482553-44482572 | Msa0407100:intron | 50.0% | |
| ! | TGGCATACAAGCATGGACTG+TGG | + | chr3_2:44482640-44482659 | None:intergenic | 50.0% |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | - | chr3_2:44482878-44482897 | Msa0407100:CDS | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | + | chr3_2:44482883-44482902 | None:intergenic | 50.0% | |
| TGCAACTGCAGTTGTGATGG+CGG | - | chr3_2:44483025-44483044 | Msa0407100:CDS | 50.0% | |
| !! | AGACTTGCTGGGATGCTTGT+AGG | + | chr3_2:44483273-44483292 | None:intergenic | 50.0% |
| CATCCCAGCAAGTCTAAGTG+TGG | - | chr3_2:44483278-44483297 | Msa0407100:CDS | 50.0% | |
| TGTACCTATGCTCACGGGGT+TGG | - | chr3_2:44481757-44481776 | Msa0407100:intron | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | - | chr3_2:44481767-44481786 | Msa0407100:intron | 55.0% |
| TAAGGAAGCCACCGCCGAAT+TGG | - | chr3_2:44481785-44481804 | Msa0407100:intron | 55.0% | |
| GCTAGCACCTTCCAATTCGG+CGG | + | chr3_2:44481799-44481818 | None:intergenic | 55.0% | |
| !! | CCGAATTGGAAGGTGCTAGC+TGG | - | chr3_2:44481799-44481818 | Msa0407100:intron | 55.0% |
| GGTCTGTGAACAAGCCAGCA+AGG | - | chr3_2:44482040-44482059 | Msa0407100:intron | 55.0% | |
| CGCCCTGTTTGCTTCCACAT+GGG | + | chr3_2:44482093-44482112 | None:intergenic | 55.0% | |
| ACGCCCTGTTTGCTTCCACA+TGG | + | chr3_2:44482094-44482113 | None:intergenic | 55.0% | |
| !! | CAAACAGGGCGTTGTCCCTT+TGG | - | chr3_2:44482102-44482121 | Msa0407100:intron | 55.0% |
| !! | AACAGGGCGTTGTCCCTTTG+GGG | - | chr3_2:44482104-44482123 | Msa0407100:intron | 55.0% |
| GCCATAACTGCACCAAGGCA+TGG | - | chr3_2:44482550-44482569 | Msa0407100:intron | 55.0% | |
| GCACAACATCCTCCATGCCT+TGG | + | chr3_2:44482565-44482584 | None:intergenic | 55.0% | |
| GGCCTATGGCAGAAACATGC+TGG | + | chr3_2:44482619-44482638 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | + | chr3_2:44482633-44482652 | None:intergenic | 55.0% |
| TGTACCTATGCTCACGGGGT+TGG | - | chr3_2:44481757-44481776 | Msa0407100:intron | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | - | chr3_2:44481767-44481786 | Msa0407100:intron | 55.0% |
| TAAGGAAGCCACCGCCGAAT+TGG | - | chr3_2:44481785-44481804 | Msa0407100:intron | 55.0% | |
| GCTAGCACCTTCCAATTCGG+CGG | + | chr3_2:44481799-44481818 | None:intergenic | 55.0% | |
| !! | CCGAATTGGAAGGTGCTAGC+TGG | - | chr3_2:44481799-44481818 | Msa0407100:intron | 55.0% |
| GGTCTGTGAACAAGCCAGCA+AGG | - | chr3_2:44482040-44482059 | Msa0407100:intron | 55.0% | |
| CGCCCTGTTTGCTTCCACAT+GGG | + | chr3_2:44482093-44482112 | None:intergenic | 55.0% | |
| ACGCCCTGTTTGCTTCCACA+TGG | + | chr3_2:44482094-44482113 | None:intergenic | 55.0% | |
| !! | CAAACAGGGCGTTGTCCCTT+TGG | - | chr3_2:44482102-44482121 | Msa0407100:intron | 55.0% |
| !! | AACAGGGCGTTGTCCCTTTG+GGG | - | chr3_2:44482104-44482123 | Msa0407100:intron | 55.0% |
| GCCATAACTGCACCAAGGCA+TGG | - | chr3_2:44482550-44482569 | Msa0407100:intron | 55.0% | |
| GCACAACATCCTCCATGCCT+TGG | + | chr3_2:44482565-44482584 | None:intergenic | 55.0% | |
| GGCCTATGGCAGAAACATGC+TGG | + | chr3_2:44482619-44482638 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | + | chr3_2:44482633-44482652 | None:intergenic | 55.0% |
| CTCACCAACCCCGTGAGCAT+AGG | + | chr3_2:44481764-44481783 | None:intergenic | 60.0% | |
| GAAGCCACCGCCGAATTGGA+AGG | - | chr3_2:44481789-44481808 | Msa0407100:intron | 60.0% | |
| AGCACCTTCCAATTCGGCGG+TGG | + | chr3_2:44481796-44481815 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAACGAGGAA+TGG | - | chr3_2:44481818-44481837 | Msa0407100:intron | 60.0% |
| GATGTTGTGCCAGCCGCCAT+AGG | - | chr3_2:44482575-44482594 | Msa0407100:intron | 60.0% | |
| CCATTGTAGCCTATGGCGGC+TGG | + | chr3_2:44482587-44482606 | None:intergenic | 60.0% | |
| CCAGCCGCCATAGGCTACAA+TGG | - | chr3_2:44482584-44482603 | Msa0407100:intron | 60.0% | |
| CTCACCAACCCCGTGAGCAT+AGG | + | chr3_2:44481764-44481783 | None:intergenic | 60.0% | |
| GAAGCCACCGCCGAATTGGA+AGG | - | chr3_2:44481789-44481808 | Msa0407100:intron | 60.0% | |
| AGCACCTTCCAATTCGGCGG+TGG | + | chr3_2:44481796-44481815 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAACGAGGAA+TGG | - | chr3_2:44481818-44481837 | Msa0407100:intron | 60.0% |
| GATGTTGTGCCAGCCGCCAT+AGG | - | chr3_2:44482575-44482594 | Msa0407100:intron | 60.0% | |
| CCATTGTAGCCTATGGCGGC+TGG | + | chr3_2:44482587-44482606 | None:intergenic | 60.0% | |
| CCAGCCGCCATAGGCTACAA+TGG | - | chr3_2:44482584-44482603 | Msa0407100:intron | 60.0% | |
| ! | GCTAGCTGGCTCTCGCAACG+AGG | - | chr3_2:44481813-44481832 | Msa0407100:intron | 65.0% |
| ! | GCTAGCTGGCTCTCGCAACG+AGG | - | chr3_2:44481813-44481832 | Msa0407100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 44481571 | 44483416 | 44481571 | ID=Msa0407100;Name=Msa0407100 |
| chr3_2 | mRNA | 44481571 | 44483416 | 44481571 | ID=Msa0407100-mRNA-1;Parent=Msa0407100;Name=Msa0407100-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|0|0|2|0|268 |
| chr3_2 | exon | 44482798 | 44483416 | 44482798 | ID=Msa0407100-mRNA-1:exon:8583;Parent=Msa0407100-mRNA-1 |
| chr3_2 | exon | 44481571 | 44481758 | 44481571 | ID=Msa0407100-mRNA-1:exon:8582;Parent=Msa0407100-mRNA-1 |
| chr3_2 | CDS | 44482798 | 44483416 | 44482798 | ID=Msa0407100-mRNA-1:cds;Parent=Msa0407100-mRNA-1 |
| chr3_2 | CDS | 44481571 | 44481758 | 44481571 | ID=Msa0407100-mRNA-1:cds;Parent=Msa0407100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
