AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0408440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0408440 MtrunA17_Chr3g0099131 89.890 544 45 4 1 540 1 538 0.0 850
Msa0408440 MtrunA17_Chr3g0099141 87.692 130 10 1 1 130 1 124 1.70e-67 214
Msa0408440 MtrunA17_Chr3g0080861 62.264 159 50 2 4 160 1 151 6.09e-62 212
Msa0408440 MtrunA17_Chr8g0354661 81.739 115 21 0 46 160 37 151 1.61e-61 211
Msa0408440 MtrunA17_Chr2g0322521 80.357 112 22 0 46 157 29 140 2.59e-55 191
Msa0408440 MtrunA17_Chr1g0154031 70.435 115 34 0 46 160 76 190 6.18e-55 190
Msa0408440 MtrunA17_Chr5g0410961 61.404 114 44 0 36 149 2 115 2.96e-47 168
Msa0408440 MtrunA17_Chr1g0192411 61.667 120 46 0 38 157 4 123 5.97e-47 169
Msa0408440 MtrunA17_Chr2g0281071 66.346 104 35 0 46 149 13 116 2.62e-46 165
Msa0408440 MtrunA17_Chr1g0203411 55.814 129 52 1 46 169 12 140 5.00e-46 163
Msa0408440 MtrunA17_Chr5g0395281 61.261 111 43 0 42 152 8 118 1.03e-45 162
Msa0408440 MtrunA17_Chr4g0039971 58.974 117 48 0 36 152 3 119 1.38e-45 164
Msa0408440 MtrunA17_Chr4g0048511 62.727 110 40 1 46 154 13 122 2.36e-45 163
Msa0408440 MtrunA17_Chr2g0323411 61.404 114 43 1 42 154 8 121 3.36e-45 162
Msa0408440 MtrunA17_Chr7g0228231 57.798 109 46 0 45 153 13 121 5.68e-45 157
Msa0408440 MtrunA17_Chr1g0209661 52.586 116 55 0 37 152 18 133 2.34e-44 159
Msa0408440 MtrunA17_Chr1g0168661 57.377 122 52 0 30 151 5 126 4.73e-44 157
Msa0408440 MtrunA17_Chr1g0194301 57.658 111 47 0 42 152 29 139 6.89e-44 157
Msa0408440 MtrunA17_Chr1g0193371 62.617 107 40 0 46 152 12 118 8.39e-44 159
Msa0408440 MtrunA17_Chr3g0115821 57.265 117 50 0 36 152 2 118 9.40e-44 158
Msa0408440 MtrunA17_Chr1g0194291 54.701 117 53 0 36 152 11 127 3.00e-43 154
Msa0408440 MtrunA17_Chr6g0450101 57.944 107 45 0 46 152 14 120 4.82e-43 152
Msa0408440 MtrunA17_Chr1g0186061 52.941 136 53 2 16 151 1 125 4.96e-43 154
Msa0408440 MtrunA17_Chr5g0435101 57.407 108 46 0 42 149 7 114 5.82e-43 152
Msa0408440 MtrunA17_Chr1g0167661 47.222 144 70 1 42 185 8 145 2.27e-42 152
Msa0408440 MtrunA17_Chr8g0349261 57.798 109 45 1 42 149 9 117 3.61e-42 152
Msa0408440 MtrunA17_Chr1g0193801 61.682 107 41 0 46 152 12 118 7.06e-42 154
Msa0408440 MtrunA17_Chr2g0328771 58.491 106 44 0 46 151 20 125 7.10e-42 152
Msa0408440 MtrunA17_Chr4g0060721 59.259 108 44 0 42 149 9 116 7.26e-42 153
Msa0408440 MtrunA17_Chr7g0254411 58.333 108 45 0 42 149 8 115 9.48e-42 153
Msa0408440 MtrunA17_Chr6g0453211 62.136 103 39 0 42 144 8 110 1.24e-41 152
Msa0408440 MtrunA17_Chr2g0330041 44.324 185 89 5 36 217 2 175 1.31e-41 154
Msa0408440 MtrunA17_Chr4g0032401 59.434 106 43 0 46 151 17 122 1.38e-41 152
Msa0408440 MtrunA17_Chr3g0110351 54.701 117 53 0 36 152 2 118 1.46e-41 151
Msa0408440 MtrunA17_Chr5g0434571 54.701 117 53 0 36 152 38 154 1.86e-41 152
Msa0408440 MtrunA17_Chr4g0068061 57.407 108 46 0 42 149 8 115 2.10e-41 152
Msa0408440 MtrunA17_Chr7g0217221 55.856 111 49 0 42 152 8 118 2.13e-41 150
Msa0408440 MtrunA17_Chr1g0167691 56.481 108 47 0 42 149 8 115 3.28e-41 149
Msa0408440 MtrunA17_Chr7g0217741 55.263 114 51 0 36 149 2 115 3.45e-41 150
Msa0408440 MtrunA17_Chr7g0261281 53.175 126 55 1 36 161 2 123 3.69e-41 149
Msa0408440 MtrunA17_Chr7g0270891 58.879 107 44 0 46 152 12 118 4.14e-41 152
Msa0408440 MtrunA17_Chr4g0037141 57.018 114 49 0 36 149 2 115 4.24e-41 149
Msa0408440 MtrunA17_Chr3g0088461 55.963 109 48 0 43 151 19 127 4.83e-41 151
Msa0408440 MtrunA17_Chr8g0387421 53.846 117 54 0 36 152 2 118 5.93e-41 150
Msa0408440 MtrunA17_Chr1g0187761 55.856 111 49 0 42 152 8 118 7.59e-41 148
Msa0408440 MtrunA17_Chr6g0452271 40.556 180 91 3 42 220 8 172 8.12e-41 150
Msa0408440 MtrunA17_Chr4g0042671 55.833 120 52 1 36 154 2 121 8.13e-41 152
Msa0408440 MtrunA17_Chr7g0274581 53.153 111 52 0 42 152 8 118 1.02e-40 146
Msa0408440 MtrunA17_Chr6g0453471 56.140 114 50 0 36 149 2 115 1.37e-40 150
Msa0408440 MtrunA17_Chr3g0131121 52.113 142 57 2 36 172 2 137 1.47e-40 148
Msa0408440 MtrunA17_Chr8g0346561 52.756 127 58 2 43 167 9 135 1.47e-40 148
Msa0408440 MtrunA17_Chr1g0152011 58.716 109 44 1 42 149 8 116 3.40e-40 149
Msa0408440 MtrunA17_Chr4g0022931 56.075 107 47 0 43 149 10 116 5.02e-40 146
Msa0408440 MtrunA17_Chr7g0275911 53.271 107 50 0 43 149 9 115 5.96e-40 145
Msa0408440 MtrunA17_Chr3g0092401 54.054 111 51 0 42 152 9 119 7.27e-40 147
Msa0408440 MtrunA17_Chr8g0385321 56.557 122 43 2 48 169 14 125 9.80e-40 147
Msa0408440 MtrunA17_Chr4g0057031 55.556 108 48 0 42 149 8 115 9.83e-40 145
Msa0408440 MtrunA17_Chr5g0397231 55.963 109 48 0 36 144 2 110 1.12e-39 147
Msa0408440 MtrunA17_Chr3g0121241 54.206 107 49 0 43 149 39 145 1.12e-39 146
Msa0408440 MtrunA17_Chr3g0117091 56.364 110 47 1 46 154 12 121 1.19e-39 147
Msa0408440 MtrunA17_Chr4g0058631 46.939 147 68 3 46 182 12 158 1.25e-39 147
Msa0408440 MtrunA17_Chr1g0151941 44.928 138 71 2 36 168 2 139 1.25e-39 144
Msa0408440 MtrunA17_Chr1g0211161 55.455 110 48 1 46 154 13 122 1.93e-39 143
Msa0408440 MtrunA17_Chr4g0022901 55.140 107 48 0 43 149 10 116 2.27e-39 144
Msa0408440 MtrunA17_Chr2g0327351 60.577 104 40 1 42 144 8 111 2.43e-39 145
Msa0408440 MtrunA17_Chr7g0271241 63.265 98 36 0 46 143 12 109 3.79e-39 147
Msa0408440 MtrunA17_Chr8g0342541 53.509 114 53 0 36 149 2 115 4.14e-39 145
Msa0408440 MtrunA17_Chr1g0180391 55.462 119 51 1 44 160 17 135 4.18e-39 142
Msa0408440 MtrunA17_Chr5g0400821 56.881 109 46 1 42 149 8 116 4.43e-39 145
Msa0408440 MtrunA17_Chr2g0323351 57.944 107 45 0 42 148 8 114 4.51e-39 143
Msa0408440 MtrunA17_Chr4g0022911 54.717 106 48 0 44 149 11 116 6.13e-39 144
Msa0408440 MtrunA17_Chr2g0309911 54.545 110 49 1 46 154 11 120 7.69e-39 144
Msa0408440 MtrunA17_Chr2g0311221 55.856 111 49 0 34 144 2 112 7.89e-39 144
Msa0408440 MtrunA17_Chr7g0264641 53.913 115 52 1 36 149 2 116 8.08e-39 143
Msa0408440 MtrunA17_Chr4g0028311 55.046 109 48 1 42 149 8 116 8.11e-39 144
Msa0408440 MtrunA17_Chr4g0070611 52.586 116 55 0 36 151 2 117 8.86e-39 144
Msa0408440 MtrunA17_Chr8g0334881 52.632 114 53 1 39 151 3 116 1.05e-38 144
Msa0408440 MtrunA17_Chr8g0342521 43.275 171 81 3 36 201 2 161 1.12e-38 144
Msa0408440 MtrunA17_Chr3g0103281 55.556 108 48 0 42 149 8 115 1.35e-38 144
Msa0408440 MtrunA17_Chr5g0440781 46.622 148 73 3 47 193 13 155 1.48e-38 139
Msa0408440 MtrunA17_Chr5g0417821 59.091 110 44 1 46 154 7 116 1.66e-38 142
Msa0408440 MtrunA17_Chr4g0022891 56.604 106 46 0 42 147 8 113 1.97e-38 141
Msa0408440 MtrunA17_Chr5g0441141 46.622 148 73 3 47 193 13 155 4.56e-38 141
Msa0408440 MtrunA17_Chr5g0440761 46.622 148 73 3 47 193 13 155 5.72e-38 140
Msa0408440 MtrunA17_Chr7g0228891 52.727 110 52 0 42 151 8 117 5.73e-38 140
Msa0408440 MtrunA17_Chr4g0013361 48.855 131 53 2 46 175 10 127 9.44e-38 140
Msa0408440 MtrunA17_Chr2g0293911 55.856 111 49 0 42 152 20 130 1.37e-37 141
Msa0408440 MtrunA17_Chr3g0135311 42.690 171 82 4 42 196 8 178 1.47e-37 141
Msa0408440 MtrunA17_Chr4g0044421 56.863 102 44 0 48 149 14 115 3.10e-37 136
Msa0408440 MtrunA17_Chr2g0327821 40.789 152 86 2 43 191 3 153 3.30e-37 137
Msa0408440 MtrunA17_Chr4g0055981 47.059 136 65 1 40 175 49 177 4.10e-37 137
Msa0408440 MtrunA17_Chr4g0054391 58.252 103 42 1 42 143 8 110 4.37e-37 139
Msa0408440 MtrunA17_Chr8g0343831 56.604 106 45 1 48 152 10 115 4.60e-37 137
Msa0408440 MtrunA17_Chr4g0070641 45.390 141 73 1 46 186 12 148 5.08e-37 135
Msa0408440 MtrunA17_Chr4g0068921 49.206 126 64 0 27 152 5 130 1.56e-36 134
Msa0408440 MtrunA17_Chr4g0022881 53.271 107 50 0 42 148 8 114 3.22e-36 134
Msa0408440 MtrunA17_Chr1g0194951 54.206 107 49 0 43 149 9 115 5.64e-36 137
Msa0408440 MtrunA17_Chr5g0441131 51.282 117 56 1 44 159 7 123 6.19e-36 132
Msa0408440 MtrunA17_Chr1g0203441 52.679 112 53 0 47 158 14 125 1.05e-35 134
Msa0408440 MtrunA17_Chr8g0342481 50.435 115 56 1 36 149 2 116 1.57e-35 137
Msa0408440 MtrunA17_Chr4g0072751 56.731 104 44 1 42 144 8 111 2.74e-35 135
Msa0408440 MtrunA17_Chr6g0487491 45.669 127 60 2 36 153 2 128 2.00e-34 130
Msa0408440 MtrunA17_Chr4g0030881 48.673 113 51 1 47 152 8 120 3.04e-34 130
Msa0408440 MtrunA17_Chr7g0269831 57.407 108 46 0 42 149 8 115 9.57e-34 131
Msa0408440 MtrunA17_Chr6g0470971 50.926 108 53 0 43 150 11 118 1.34e-33 129
Msa0408440 MtrunA17_Chr7g0220341 38.509 161 88 4 46 204 25 176 2.32e-33 128
Msa0408440 MtrunA17_Chr5g0434831 50.000 104 52 0 46 149 7 110 1.71e-32 123
Msa0408440 MtrunA17_Chr8g0360111 52.475 101 48 0 46 146 25 125 2.52e-32 125
Msa0408440 MtrunA17_Chr7g0240821 41.135 141 75 2 50 190 5 137 2.87e-32 124
Msa0408440 MtrunA17_Chr5g0434931 47.619 105 55 0 46 150 35 139 3.26e-32 125
Msa0408440 MtrunA17_Chr7g0247131 66.216 74 25 0 78 151 10 83 3.93e-32 124
Msa0408440 MtrunA17_Chr5g0434841 50.000 104 52 0 46 149 20 123 1.28e-31 124
Msa0408440 MtrunA17_Chr4g0053431 53.922 102 46 1 48 149 5 105 3.52e-31 122
Msa0408440 MtrunA17_Chr4g0008551 50.435 115 51 2 48 162 38 146 3.85e-31 124
Msa0408440 MtrunA17_Chr5g0401731 51.402 107 51 1 43 149 10 115 4.34e-31 123
Msa0408440 MtrunA17_Chr5g0434911 47.619 105 55 0 46 150 21 125 5.10e-31 121
Msa0408440 MtrunA17_Chr6g0454921 49.533 107 53 1 43 149 10 115 3.02e-30 117
Msa0408440 MtrunA17_Chr3g0133601 50.943 106 51 1 48 153 37 141 3.34e-30 118
Msa0408440 MtrunA17_Chr7g0228991 47.115 104 55 0 46 149 29 132 4.17e-30 119
Msa0408440 MtrunA17_Chr5g0395221 57.500 80 34 0 43 122 9 88 3.06e-29 110
Msa0408440 MtrunA17_Chr5g0429661 51.429 105 49 2 46 150 120 222 3.19e-28 115
Msa0408440 MtrunA17_Chr6g0453751 53.922 102 34 3 35 127 13 110 6.48e-28 108
Msa0408440 MtrunA17_Chr2g0294811 54.321 81 37 0 42 122 8 88 1.35e-27 107
Msa0408440 MtrunA17_Chr4g0042611 52.874 87 41 0 36 122 2 88 1.94e-27 105
Msa0408440 MtrunA17_Chr3g0117511 45.763 118 59 3 43 157 178 293 2.45e-27 114
Msa0408440 MtrunA17_Chr5g0437321 49.091 110 54 2 38 146 8 116 5.93e-27 110
Msa0408440 MtrunA17_Chr2g0323321 49.438 89 45 0 42 130 7 95 1.08e-26 104
Msa0408440 MtrunA17_Chr1g0157731 45.192 104 56 1 46 149 89 191 5.59e-26 112
Msa0408440 MtrunA17_Chr7g0238631 47.115 104 54 1 46 149 111 213 6.46e-26 111
Msa0408440 MtrunA17_Chr3g0139671 38.406 138 69 3 46 172 83 215 7.23e-26 112
Msa0408440 MtrunA17_Chr4g0058991 46.667 105 54 2 46 150 207 309 9.02e-26 110
Msa0408440 MtrunA17_Chr5g0417621 41.667 120 69 1 33 152 119 237 1.55e-25 109
Msa0408440 MtrunA17_Chr7g0228531 47.706 109 54 3 43 151 215 320 1.56e-25 109
Msa0408440 MtrunA17_Chr8g0342531 52.439 82 39 0 42 123 8 89 1.66e-25 102
Msa0408440 MtrunA17_Chr4g0042501 39.437 142 80 2 48 184 105 245 2.35e-25 108
Msa0408440 MtrunA17_Chr8g0342511 50.000 86 43 0 36 121 2 87 2.60e-25 100
Msa0408440 MtrunA17_Chr5g0425591 53.571 84 38 1 45 127 8 91 9.51e-25 98.2
Msa0408440 MtrunA17_Chr6g0460661 42.735 117 64 2 40 154 6 121 2.58e-24 99.4
Msa0408440 MtrunA17_Chr6g0480581 41.441 111 64 1 48 158 4 113 4.46e-24 101
Msa0408440 MtrunA17_Chr7g0254261 44.545 110 60 1 48 157 89 197 2.83e-23 101
Msa0408440 MtrunA17_Chr8g0342461 51.948 77 36 1 48 123 14 90 3.79e-23 95.5
Msa0408440 MtrunA17_Chr8g0342471 51.282 78 37 1 48 124 14 91 9.87e-23 94.4
Msa0408440 MtrunA17_Chr7g0238651 44.231 104 56 2 51 152 10 113 1.70e-22 99.4
Msa0408440 MtrunA17_Chr3g0125801 42.609 115 65 1 38 152 6 119 3.96e-22 96.7
Msa0408440 MtrunA17_Chr7g0228481 46.078 102 53 2 43 144 215 314 6.03e-22 98.6
Msa0408440 MtrunA17_Chr5g0434901 55.882 68 30 0 80 147 7 74 6.08e-22 91.3
Msa0408440 MtrunA17_Chr7g0229101 55.714 70 31 0 78 147 4 73 6.28e-22 94.0
Msa0408440 MtrunA17_Chr6g0460671 42.056 107 61 1 48 154 99 204 9.55e-22 96.7
Msa0408440 MtrunA17_Chr5g0397841 44.444 99 54 1 45 143 107 204 1.00e-21 98.2
Msa0408440 MtrunA17_Chr7g0229131 53.521 71 33 0 78 148 4 74 3.64e-21 90.9
Msa0408440 MtrunA17_Chr7g0228401 48.837 86 43 1 59 144 290 374 3.88e-21 96.7
Msa0408440 MtrunA17_Chr3g0093811 50.667 75 37 0 78 152 14 88 8.03e-20 89.4
Msa0408440 MtrunA17_Chr5g0416341 40.594 101 59 1 51 151 29 128 1.65e-19 91.3
Msa0408440 MtrunA17_Chr1g0177901 47.126 87 45 1 58 144 4 89 1.82e-19 87.0
Msa0408440 MtrunA17_Chr1g0193901 58.333 84 33 2 46 127 11 94 7.52e-19 82.4
Msa0408440 MtrunA17_Chr1g0193891 58.333 84 33 2 46 127 11 94 7.52e-19 82.4
Msa0408440 MtrunA17_Chr1g0193871 58.333 84 33 2 46 127 11 94 7.52e-19 82.4
Msa0408440 MtrunA17_Chr1g0193881 58.333 84 33 2 46 127 11 94 7.52e-19 82.4
Msa0408440 MtrunA17_Chr7g0233061 40.594 101 57 2 44 144 176 273 9.03e-18 85.1
Msa0408440 MtrunA17_Chr8g0362231 35.294 119 72 2 40 154 10 127 1.51e-17 85.1
Msa0408440 MtrunA17_Chr3g0104491 51.923 52 24 1 99 150 17 67 9.48e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0408440 AT4G26930.1 36.939 490 192 16 33 516 6 384 1.75e-71 234
Msa0408440 AT2G32460.1 35.519 549 260 22 26 540 2 490 1.03e-68 229
Msa0408440 AT2G32460.2 35.917 529 249 21 46 540 6 478 2.54e-67 225
Msa0408440 AT5G06100.1 83.193 119 20 0 42 160 28 146 6.51e-65 218
Msa0408440 AT3G11440.2 78.400 125 27 0 36 160 31 155 1.63e-64 218
Msa0408440 AT5G06100.5 83.193 119 20 0 42 160 28 146 4.70e-64 218
Msa0408440 AT5G06100.2 83.193 119 20 0 42 160 28 146 4.70e-64 218
Msa0408440 AT5G06100.3 83.193 119 20 0 42 160 28 146 4.70e-64 218
Msa0408440 AT5G06100.4 83.193 119 20 0 42 160 28 146 4.70e-64 218
Msa0408440 AT3G11440.3 78.400 125 27 0 36 160 31 155 1.88e-63 217
Msa0408440 AT3G11440.4 78.400 125 27 0 36 160 31 155 1.88e-63 217
Msa0408440 AT3G11440.1 78.400 125 27 0 36 160 31 155 1.88e-63 217
Msa0408440 AT2G26960.1 70.866 127 33 1 38 160 8 134 7.31e-58 199
Msa0408440 AT4G28110.1 59.167 120 48 1 36 154 2 121 1.98e-45 161
Msa0408440 AT4G21440.1 61.818 110 41 1 46 154 12 121 3.82e-45 162
Msa0408440 AT1G22640.1 59.649 114 46 0 36 149 2 115 5.57e-45 159
Msa0408440 AT3G02940.2 58.974 117 48 0 36 152 2 118 6.24e-45 161
Msa0408440 AT5G16770.4 58.974 117 48 0 36 152 2 118 7.18e-45 161
Msa0408440 AT5G16770.3 58.974 117 48 0 36 152 2 118 7.18e-45 161
Msa0408440 AT4G05100.1 65.385 104 36 0 46 149 13 116 9.06e-45 161
Msa0408440 AT3G02940.1 58.974 117 48 0 36 152 2 118 9.80e-45 160
Msa0408440 AT3G02940.3 58.974 117 48 0 36 152 2 118 9.80e-45 160
Msa0408440 AT5G16770.1 58.974 117 48 0 36 152 2 118 1.22e-44 161
Msa0408440 AT5G16770.2 58.974 117 48 0 36 152 2 118 1.22e-44 161
Msa0408440 AT5G65230.1 58.974 117 48 0 36 152 2 118 2.08e-44 159
Msa0408440 AT5G26660.1 50.694 144 64 2 46 182 12 155 2.55e-44 160
Msa0408440 AT3G27810.1 56.364 110 48 0 43 152 17 126 2.57e-44 157
Msa0408440 AT5G10280.1 58.120 117 49 0 36 152 2 118 4.81e-44 159
Msa0408440 AT3G61250.1 51.095 137 58 1 42 169 8 144 7.69e-44 157
Msa0408440 AT1G35515.1 59.649 114 46 0 36 149 2 115 8.40e-44 155
Msa0408440 AT1G34670.1 58.974 117 48 0 36 152 2 118 6.69e-43 157
Msa0408440 AT1G57560.2 60.909 110 42 1 46 154 12 121 6.99e-43 154
Msa0408440 AT1G57560.1 60.909 110 42 1 46 154 12 121 8.04e-43 155
Msa0408440 AT5G14750.1 56.140 114 48 1 38 149 6 119 8.70e-43 152
Msa0408440 AT5G40350.1 56.604 106 46 0 43 148 14 119 8.71e-43 152
Msa0408440 AT5G60890.1 60.909 110 43 0 43 152 9 118 1.49e-42 154
Msa0408440 AT2G47190.1 41.530 183 79 4 42 200 16 194 1.64e-42 153
Msa0408440 AT3G24310.1 60.550 109 43 0 43 151 15 123 1.94e-42 153
Msa0408440 AT3G30210.1 60.952 105 41 0 47 151 28 132 1.96e-42 153
Msa0408440 AT1G09540.1 61.682 107 41 0 46 152 12 118 2.49e-42 155
Msa0408440 AT3G01530.1 54.545 110 50 0 42 151 21 130 3.08e-42 150
Msa0408440 AT4G38620.1 45.509 167 85 3 36 197 2 167 3.12e-42 153
Msa0408440 AT1G08810.1 59.259 108 44 0 42 149 8 115 3.18e-42 152
Msa0408440 AT5G07700.1 49.068 161 62 5 46 202 12 156 8.98e-42 153
Msa0408440 AT5G07700.2 49.068 161 62 5 46 202 12 156 8.98e-42 153
Msa0408440 AT1G66230.1 56.757 111 48 0 42 152 8 118 1.03e-41 151
Msa0408440 AT5G61420.2 60.000 110 43 1 46 154 12 121 1.13e-41 154
Msa0408440 AT3G28910.1 60.185 108 43 0 42 149 8 115 1.22e-41 152
Msa0408440 AT1G68320.1 53.636 110 51 0 43 152 16 125 1.24e-41 151
Msa0408440 AT4G09460.1 48.966 145 71 1 36 180 2 143 1.37e-41 149
Msa0408440 AT1G25340.1 51.754 114 55 0 39 152 11 124 1.40e-41 151
Msa0408440 AT1G63910.1 55.556 117 52 0 36 152 2 118 1.49e-41 153
Msa0408440 AT4G01680.3 60.377 106 42 0 46 151 12 117 1.51e-41 150
Msa0408440 AT4G22680.1 48.000 150 70 3 42 183 8 157 1.67e-41 150
Msa0408440 AT5G12870.1 57.944 107 45 0 46 152 18 124 2.05e-41 150
Msa0408440 AT3G27920.1 50.000 138 58 2 47 176 15 149 2.44e-41 149
Msa0408440 AT5G40330.1 53.982 113 52 0 41 153 7 119 3.32e-41 148
Msa0408440 AT4G13480.1 58.716 109 45 0 43 151 3 111 3.46e-41 149
Msa0408440 AT2G16720.1 57.018 114 49 0 36 149 2 115 3.52e-41 149
Msa0408440 AT5G15310.4 55.263 114 51 0 36 149 2 115 4.73e-41 148
Msa0408440 AT4G01680.1 60.377 106 42 0 46 151 12 117 4.87e-41 151
Msa0408440 AT3G47600.1 55.856 111 49 0 42 152 8 118 4.88e-41 151
Msa0408440 AT5G07690.1 61.165 103 40 0 46 148 12 114 5.29e-41 151
Msa0408440 AT1G18570.1 60.748 107 42 0 43 149 10 116 5.62e-41 151
Msa0408440 AT5G57620.1 41.799 189 98 3 42 229 8 185 5.92e-41 151
Msa0408440 AT5G54230.1 58.182 110 45 1 46 154 12 121 7.00e-41 150
Msa0408440 AT4G34990.1 60.185 108 42 1 48 154 14 121 7.49e-41 149
Msa0408440 AT3G01140.2 56.140 114 50 0 36 149 2 115 7.96e-41 150
Msa0408440 AT3G13890.2 52.632 114 54 0 36 149 2 115 9.92e-41 151
Msa0408440 AT1G74650.1 57.407 108 46 0 42 149 8 115 1.26e-40 150
Msa0408440 AT1G79180.1 47.183 142 71 1 34 175 2 139 1.34e-40 149
Msa0408440 AT1G16490.1 51.181 127 62 0 34 160 2 128 1.40e-40 148
Msa0408440 AT5G15310.1 55.263 114 51 0 36 149 2 115 1.58e-40 149
Msa0408440 AT5G15310.2 55.263 114 51 0 36 149 2 115 2.15e-40 149
Msa0408440 AT3G01140.1 57.407 108 46 0 42 149 51 158 2.18e-40 150
Msa0408440 AT1G06180.1 57.407 108 46 0 42 149 8 115 2.84e-40 146
Msa0408440 AT1G48000.1 55.340 103 46 0 46 148 32 134 3.05e-40 146
Msa0408440 AT5G62470.2 55.856 111 49 0 42 152 8 118 3.47e-40 149
Msa0408440 AT3G13540.1 52.212 113 53 1 43 154 20 132 3.59e-40 146
Msa0408440 AT2G31180.1 53.982 113 52 0 42 154 8 120 3.62e-40 146
Msa0408440 AT4G12350.1 56.481 108 47 0 42 149 8 115 1.40e-39 145
Msa0408440 AT1G56160.1 52.586 116 55 0 34 149 2 117 1.59e-39 146
Msa0408440 AT5G16600.1 55.856 111 49 0 42 152 8 118 1.92e-39 146
Msa0408440 AT5G59780.3 50.000 122 53 1 47 168 9 122 2.20e-39 144
Msa0408440 AT3G23250.1 54.630 108 49 0 42 149 8 115 2.27e-39 145
Msa0408440 AT5G62320.1 51.562 128 54 2 35 154 2 129 3.20e-39 144
Msa0408440 AT3G08500.1 54.867 113 51 0 39 151 23 135 4.10e-39 146
Msa0408440 AT4G37780.1 55.046 109 48 1 42 149 8 116 5.79e-39 144
Msa0408440 AT3G46130.1 49.180 122 54 1 47 168 10 123 5.90e-39 143
Msa0408440 AT5G52600.1 53.982 113 49 1 46 155 12 124 9.19e-39 141
Msa0408440 AT5G65790.1 57.798 109 45 1 42 149 8 116 1.10e-38 145
Msa0408440 AT1G74080.1 61.165 103 40 0 46 148 12 114 1.18e-38 144
Msa0408440 AT5G62470.1 55.856 111 48 1 42 152 8 117 1.23e-38 145
Msa0408440 AT5G23000.1 45.570 158 70 3 42 185 8 163 1.27e-38 144
Msa0408440 AT3G49690.1 55.652 115 50 1 36 149 2 116 1.31e-38 144
Msa0408440 AT4G17785.2 55.455 110 49 0 43 152 10 119 1.33e-38 145
Msa0408440 AT4G17785.1 55.455 110 49 0 43 152 10 119 1.41e-38 145
Msa0408440 AT2G47460.1 54.630 108 49 0 42 149 8 115 1.59e-38 145
Msa0408440 AT5G35550.1 56.731 104 45 0 46 149 14 117 2.71e-38 141
Msa0408440 AT3G28470.1 56.311 103 45 0 42 144 8 110 4.70e-38 142
Msa0408440 AT5G56110.1 54.630 108 49 0 42 149 8 115 5.14e-38 142
Msa0408440 AT3G13890.1 48.780 123 54 1 36 149 2 124 7.73e-38 143
Msa0408440 AT4G01680.2 54.237 118 42 1 46 151 12 129 9.47e-38 142
Msa0408440 AT3G12720.1 53.636 110 50 1 46 154 22 131 9.61e-38 141
Msa0408440 AT5G14340.1 47.857 140 72 1 36 175 14 152 1.32e-37 140
Msa0408440 AT3G62610.1 53.704 108 50 0 42 149 8 115 1.48e-37 142
Msa0408440 AT1G25340.2 49.123 114 53 1 39 152 11 119 3.00e-37 139
Msa0408440 AT1G74430.1 46.970 132 66 2 42 172 8 136 4.40e-37 138
Msa0408440 AT1G25340.3 49.123 114 53 1 39 152 11 119 6.23e-37 139
Msa0408440 AT3G60460.1 54.206 107 48 1 46 151 11 117 1.02e-36 138
Msa0408440 AT2G36890.1 55.046 109 48 1 42 149 8 116 1.39e-36 138
Msa0408440 AT2G26950.1 54.867 113 51 0 48 160 18 130 1.40e-36 140
Msa0408440 AT2G36890.2 53.043 115 53 1 36 149 43 157 2.25e-36 138
Msa0408440 AT5G49330.1 49.167 120 61 0 42 161 8 127 2.78e-36 138
Msa0408440 AT3G06490.1 54.955 111 50 0 42 152 15 125 6.99e-36 137
Msa0408440 AT3G12820.1 52.778 108 51 0 42 149 10 117 7.08e-36 134
Msa0408440 AT1G79180.2 38.857 175 70 2 34 175 2 172 1.75e-35 135
Msa0408440 AT5G49620.1 53.153 111 52 0 42 152 22 132 5.52e-35 134
Msa0408440 AT1G18710.1 49.123 114 57 1 42 154 8 121 6.48e-35 132
Msa0408440 AT3G53200.1 51.852 108 52 0 43 150 6 113 2.74e-34 130
Msa0408440 AT1G66380.1 45.985 137 71 1 41 177 3 136 7.03e-34 125
Msa0408440 AT1G66370.1 50.962 104 51 0 46 149 8 111 2.17e-33 127
Msa0408440 AT5G26660.2 53.153 111 45 2 79 182 14 124 2.90e-33 129
Msa0408440 AT3G48920.1 50.980 102 50 0 47 148 19 120 1.87e-32 125
Msa0408440 AT1G56650.1 43.165 139 79 0 41 179 3 141 4.73e-32 124
Msa0408440 AT5G49620.2 47.200 125 52 1 42 152 22 146 1.48e-31 124
Msa0408440 AT5G52260.1 42.857 161 89 2 38 197 4 162 1.50e-31 123
Msa0408440 AT4G25560.1 49.515 103 52 0 47 149 11 113 1.64e-30 120
Msa0408440 AT3G50060.1 46.457 127 62 2 44 165 2 127 2.78e-30 120
Msa0408440 AT5G58850.1 47.287 129 62 3 45 169 102 228 3.94e-30 123
Msa0408440 AT5G11050.1 54.717 106 46 2 45 150 102 205 1.20e-29 121
Msa0408440 AT3G55730.1 45.985 137 69 3 48 184 56 187 3.04e-29 120
Msa0408440 AT3G46130.3 53.846 91 34 1 78 168 9 91 4.46e-29 115
Msa0408440 AT1G66390.1 43.704 135 74 1 41 175 3 135 5.50e-29 115
Msa0408440 AT5G59780.2 53.846 91 34 1 78 168 19 101 6.10e-29 114
Msa0408440 AT3G46130.4 53.846 91 34 1 78 168 19 101 8.38e-29 114
Msa0408440 AT3G27810.2 59.459 74 30 0 79 152 4 77 1.01e-28 112
Msa0408440 AT3G09230.1 47.899 119 60 2 31 149 39 155 1.02e-28 118
Msa0408440 AT4G37260.1 51.961 102 48 1 48 149 13 113 2.08e-28 115
Msa0408440 AT2G23290.1 49.533 107 53 1 43 149 8 113 5.57e-28 114
Msa0408440 AT5G67300.1 50.000 106 52 1 44 149 2 106 7.39e-28 114
Msa0408440 AT4G18770.1 49.074 108 53 2 43 150 212 317 9.27e-28 116
Msa0408440 AT5G40350.2 59.722 72 29 0 77 148 3 74 1.12e-27 109
Msa0408440 AT1G69560.1 43.860 114 63 1 39 152 98 210 7.78e-27 111
Msa0408440 AT1G69560.2 43.860 114 63 1 39 152 114 226 8.35e-27 112
Msa0408440 AT5G02320.1 46.154 104 55 1 46 149 125 227 1.59e-26 114
Msa0408440 AT5G02320.2 46.154 104 55 1 46 149 125 227 1.59e-26 114
Msa0408440 AT5G02320.3 46.154 104 55 1 46 149 65 167 1.93e-26 113
Msa0408440 AT2G39880.1 49.091 110 54 2 40 149 43 150 2.30e-26 110
Msa0408440 AT3G29020.1 47.619 105 54 1 48 152 65 168 2.34e-26 107
Msa0408440 AT3G12820.2 64.706 68 24 0 82 149 2 69 3.04e-26 106
Msa0408440 AT1G26780.1 41.600 125 72 1 46 170 96 219 3.33e-26 108
Msa0408440 AT3G29020.2 47.619 105 54 1 48 152 67 170 3.34e-26 109
Msa0408440 AT3G53200.2 62.500 72 27 0 79 150 9 80 3.93e-26 106
Msa0408440 AT1G26780.2 41.600 125 72 1 46 170 96 219 7.60e-26 109
Msa0408440 AT3G27785.1 45.370 108 57 2 43 150 184 289 8.05e-26 110
Msa0408440 AT5G35550.2 60.563 71 28 0 79 149 50 120 9.08e-26 107
Msa0408440 AT3G09370.2 45.714 105 56 1 45 149 132 235 1.00e-25 111
Msa0408440 AT3G09370.1 45.714 105 56 1 45 149 127 230 1.13e-25 110
Msa0408440 AT3G09370.3 45.714 105 56 1 45 149 140 243 1.41e-25 110
Msa0408440 AT4G32730.5 45.192 104 56 1 46 149 85 187 1.73e-25 111
Msa0408440 AT4G32730.4 45.192 104 56 1 46 149 85 187 1.73e-25 111
Msa0408440 AT4G32730.3 45.192 104 56 1 46 149 85 187 1.73e-25 111
Msa0408440 AT4G32730.2 45.192 104 56 1 46 149 85 187 1.73e-25 111
Msa0408440 AT3G47600.2 56.579 76 33 0 77 152 37 112 1.87e-25 107
Msa0408440 AT4G32730.1 45.192 104 56 1 46 149 85 187 1.99e-25 111
Msa0408440 AT5G11510.3 40.164 122 61 2 46 156 79 199 3.65e-25 110
Msa0408440 AT5G11510.1 40.164 122 61 2 46 156 79 199 3.65e-25 110
Msa0408440 AT5G11510.4 40.164 122 61 2 46 156 79 199 3.65e-25 110
Msa0408440 AT5G40360.1 44.660 103 56 1 46 148 156 257 3.76e-25 107
Msa0408440 AT5G11510.2 40.164 122 61 2 46 156 79 199 3.79e-25 110
Msa0408440 AT5G11510.5 40.164 122 61 2 46 156 79 199 4.09e-25 110
Msa0408440 AT5G14750.3 57.353 68 29 0 82 149 18 85 5.59e-25 102
Msa0408440 AT5G17800.1 46.667 105 55 1 48 152 93 196 1.57e-24 104
Msa0408440 AT1G66380.3 48.485 99 48 1 79 177 8 103 3.97e-23 94.7
Msa0408440 AT4G33450.1 42.593 108 61 1 47 154 18 124 6.31e-23 98.6
Msa0408440 AT2G25230.1 42.593 108 61 1 43 150 21 127 1.07e-22 97.4
Msa0408440 AT1G17950.1 44.340 106 56 2 48 152 5 108 2.31e-22 97.1
Msa0408440 AT1G73410.1 45.714 105 56 1 48 152 6 109 3.93e-22 95.9
Msa0408440 AT1G73410.2 45.714 105 56 1 48 152 6 109 8.98e-22 94.0
Msa0408440 AT4G00540.2 42.727 110 59 2 46 152 101 209 6.76e-21 95.5
Msa0408440 AT1G18960.1 41.176 102 57 2 48 149 10 108 1.06e-20 93.2
Msa0408440 AT4G00540.1 42.727 110 59 2 46 152 99 207 1.35e-20 95.1
Msa0408440 AT1G22640.3 64.912 57 20 0 93 149 2 58 3.77e-20 89.4
Msa0408440 AT2G37630.1 39.423 104 61 1 51 152 7 110 1.43e-19 90.9
Msa0408440 AT1G66380.2 48.193 83 43 0 41 123 3 85 1.50e-19 84.7
Msa0408440 AT1G14350.2 38.614 101 61 1 51 151 28 127 4.75e-19 90.1
Msa0408440 AT1G14350.1 38.614 101 61 1 51 151 28 127 4.75e-19 90.1
Msa0408440 AT5G40430.1 38.889 108 64 2 43 150 49 154 1.43e-18 85.9
Msa0408440 AT1G71030.2 50.769 65 32 0 85 149 5 69 2.23e-17 80.5
Msa0408440 AT1G71030.1 50.769 65 32 0 85 149 19 83 3.29e-17 80.5
Msa0408440 AT3G23250.2 56.140 57 25 0 93 149 2 58 5.12e-17 80.9
Msa0408440 AT2G02820.2 36.634 101 63 1 51 151 33 132 8.49e-17 83.6
Msa0408440 AT2G02820.1 36.634 101 63 1 51 151 33 132 1.02e-16 83.2
Msa0408440 AT5G39700.1 39.048 105 60 2 49 150 57 160 1.45e-16 78.6
Msa0408440 AT2G02820.3 36.634 101 63 1 51 151 33 132 1.62e-16 81.3
Msa0408440 AT5G14750.4 50.000 58 29 0 92 149 1 58 1.83e-16 77.0
Msa0408440 AT5G14750.2 50.000 58 29 0 92 149 1 58 1.83e-16 77.0
Msa0408440 AT5G59780.1 47.692 65 26 1 104 168 1 57 2.35e-15 74.7
Msa0408440 AT3G46130.2 47.692 65 26 1 104 168 1 57 3.51e-15 74.7
Msa0408440 AT4G25560.2 54.348 46 21 0 104 149 2 47 4.12e-12 66.2
Msa0408440 AT1G14350.3 41.935 62 36 0 90 151 23 84 4.06e-11 65.5
Msa0408440 AT1G14350.4 41.935 62 36 0 90 151 23 84 4.06e-11 65.5

Find 123 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGCACCTTTCTTCAAAT+TGG 0.138440 3_2:+48255496 None:intergenic
TCCCATTAAGCCACTATTAT+TGG 0.205676 3_2:+48254181 None:intergenic
AATGATGAAAATTTGTTCTT+TGG 0.219772 3_2:-48255752 Msa0408440:CDS
GTTTACTGGTCTTCTAATTC+AGG 0.224853 3_2:-48254029 Msa0408440:intron
GTTGAACTTCATGCTCAATT+TGG 0.225837 3_2:-48255449 Msa0408440:CDS
TCCCACTTAGCTCTGTTTAC+TGG 0.235607 3_2:-48254043 Msa0408440:CDS
GACCAATAATAGTGGCTTAA+TGG 0.251657 3_2:-48254183 Msa0408440:CDS
AACAATGAGTTTCTCTTCTT+CGG 0.266276 3_2:+48255469 None:intergenic
AAACTTGAGTTGTATTGAAT+TGG 0.271785 3_2:+48254374 None:intergenic
AACTTTGGTGTAATGTTGTT+AGG 0.282244 3_2:+48254761 None:intergenic
ATTTCATTGTCTGTTCTTCC+AGG 0.289461 3_2:+48254920 None:intergenic
GAAAGAGTTGCAGGCTTAGA+TGG 0.293315 3_2:-48255535 Msa0408440:CDS
TTATTGGTCTGAAAAGAATT+AGG 0.308097 3_2:+48254197 None:intergenic
CTGATGATAGTCTTGAATAT+TGG 0.309337 3_2:+48254258 None:intergenic
TGAGTTGGTGTTGGGGATAA+AGG 0.312397 3_2:+48254680 None:intergenic
GATGTTGTTGTTGTTGATAT+TGG 0.312682 3_2:+48254714 None:intergenic
GAAGGAAATGATATGTTTAA+TGG 0.312807 3_2:-48254086 Msa0408440:CDS
GTGATGGCAGATGAAAATTT+TGG 0.315140 3_2:-48253099 Msa0408440:CDS
AAGTCTGGTGCTTCTTCCTT+TGG 0.318064 3_2:+48253258 None:intergenic
ACAATGAGTTTCTCTTCTTC+GGG 0.324516 3_2:+48255470 None:intergenic
CAAAACATGGTGAAGGGAAT+TGG 0.328985 3_2:-48255595 Msa0408440:CDS
AATGCAGTTCAAAGAAATAC+TGG 0.338610 3_2:-48255572 Msa0408440:CDS
ATGCTCAATTTGGTAACAAA+TGG 0.347862 3_2:-48255439 Msa0408440:CDS
ACCAATAATAGTGGCTTAAT+GGG 0.351403 3_2:-48254182 Msa0408440:CDS
TGATGAGGCAAATTTGAAAA+AGG 0.354009 3_2:-48255663 Msa0408440:CDS
ATACTTTCATACTCCCTTGT+TGG 0.354742 3_2:-48254345 Msa0408440:CDS
ATCGTTGTGGAAAGAGTTGC+AGG 0.354962 3_2:-48255544 Msa0408440:CDS
TTCATAAATTTGCTTAAGTC+TGG 0.357603 3_2:+48253243 None:intergenic
ATAAGAGTGGTGCAGGTCTT+TGG 0.359392 3_2:+48254525 None:intergenic
AATGCACCTTTCTTCAAATT+GGG 0.376002 3_2:+48255497 None:intergenic
TGTTGGTGTGGTTGGTGTGT+TGG 0.377745 3_2:+48254820 None:intergenic
CCACAATGCAAATTCATGAT+TGG 0.391050 3_2:-48253182 Msa0408440:CDS
GTTGGTGTGGTTGGTGTGTT+GGG 0.396039 3_2:+48254821 None:intergenic
ATGGGCTCGAATGGCTGCTT+TGG 0.397279 3_2:-48255420 Msa0408440:intron
AAATTTGTTCTTTGGTATGA+TGG 0.397628 3_2:-48255744 Msa0408440:CDS
TTAAGACCCAATTTGAAGAA+AGG 0.412812 3_2:-48255503 Msa0408440:CDS
ATCATCAGAGCAAGATGTTA+AGG 0.429195 3_2:-48254243 Msa0408440:CDS
TCACAATGCGTCACACCAAC+AGG 0.430461 3_2:-48254791 Msa0408440:CDS
GTTGTCGTTGTTGTCTATGT+TGG 0.430476 3_2:+48254630 None:intergenic
GAGTTGGTGTTGGGGATAAA+GGG 0.432570 3_2:+48254681 None:intergenic
AACCTTAATTAACAGAGTTC+AGG 0.434354 3_2:+48252961 None:intergenic
AAAACAACGGTTGCTACACT+TGG 0.436046 3_2:-48252993 Msa0408440:CDS
AGTCTTGAATATTGGTTTGA+AGG 0.441169 3_2:+48254266 None:intergenic
AGTGGTGGTGGTGGTTATAG+TGG 0.441279 3_2:-48255692 Msa0408440:CDS
GAAGGTGTTGTTGGTGTGGT+TGG 0.443561 3_2:+48254812 None:intergenic
GTGGGAAATCATCTAGGCTT+TGG 0.444870 3_2:+48254060 None:intergenic
GTTGTTGTTGTTGATATTGG+TGG 0.445286 3_2:+48254717 None:intergenic
ACTTTGGTGTAATGTTGTTA+GGG 0.446781 3_2:+48254762 None:intergenic
AATGATGATGAGTTGGTGTT+GGG 0.450792 3_2:+48254672 None:intergenic
GGTGGCAGTAGTGGTGGTGG+TGG 0.455620 3_2:-48255701 Msa0408440:CDS
ACAATGAAATAAAGAACTAC+TGG 0.460692 3_2:-48254907 Msa0408440:CDS
TGAAGGTAGCTCCAACTTTG+TGG 0.461133 3_2:+48254283 None:intergenic
TTTACCTTTCTCCACAAAGT+TGG 0.469133 3_2:-48254294 Msa0408440:CDS
CTGGTCAAAATTCAAAGAAA+AGG 0.469573 3_2:-48254127 Msa0408440:CDS
TTGTTAGGGTTTGTTCCTGT+TGG 0.470794 3_2:+48254776 None:intergenic
TGCTCAATTTGGTAACAAAT+GGG 0.473153 3_2:-48255438 Msa0408440:CDS
GAGAGGTTAAAGAAGGATCA+TGG 0.479167 3_2:+48254417 None:intergenic
AGGGACTTGAAGACTAAAGT+TGG 0.480715 3_2:+48254466 None:intergenic
TGAATTTGCATTGTGGAAGA+AGG 0.481267 3_2:+48253189 None:intergenic
AGAGGAAACAATGAAGCTAT+AGG 0.481997 3_2:+48253063 None:intergenic
TTCTTTGGTATGATGGAAAG+AGG 0.483517 3_2:-48255737 Msa0408440:CDS
AGCTCCAACTTTGTGGAGAA+AGG 0.485731 3_2:+48254290 None:intergenic
GACGGTGAGGGTGGCAGTAG+TGG 0.497764 3_2:-48255710 Msa0408440:CDS
GGTGGTGGTTATAGTGGAGG+TGG 0.498780 3_2:-48255686 Msa0408440:CDS
CGATAACGTTTGAAGCGAAA+AGG 0.500211 3_2:+48254497 None:intergenic
GTCTTCTAGTGGTGTGGTGA+TGG 0.500273 3_2:-48253115 Msa0408440:CDS
ACGCATTGTGAAGGTGTTGT+TGG 0.504215 3_2:+48254803 None:intergenic
GTTGTTGTTGATATTGGTGG+TGG 0.508415 3_2:+48254720 None:intergenic
GAAAGAGGCGGTGACGGTGA+GGG 0.515225 3_2:-48255722 Msa0408440:CDS
GAGGGTGGCAGTAGTGGTGG+TGG 0.515604 3_2:-48255704 Msa0408440:CDS
GGTGTAGATAAGAGTGGTGC+AGG 0.516122 3_2:+48254518 None:intergenic
TGTTGGAGTGGTGAAGAGAG+AGG 0.520773 3_2:+48254647 None:intergenic
AGCTAAGTGGGAAATCATCT+AGG 0.525570 3_2:+48254054 None:intergenic
AGAGGCGGTGACGGTGAGGG+TGG 0.527233 3_2:-48255719 Msa0408440:CDS
GGGACTTGAAGACTAAAGTT+GGG 0.531842 3_2:+48254467 None:intergenic
AGAGGAGAATGATGATGAGT+TGG 0.534003 3_2:+48254665 None:intergenic
GGTGAGGGTGGCAGTAGTGG+TGG 0.539637 3_2:-48255707 Msa0408440:CDS
TGGTAACAAATGGGCTCGAA+TGG 0.542882 3_2:-48255429 Msa0408440:CDS
GTATCCTCTGCTGTTGTCCA+AGG 0.544371 3_2:+48255638 None:intergenic
GAAGCACAAACACTAGCATC+TGG 0.546038 3_2:-48254146 Msa0408440:CDS
TGTATTGTGGCATAGTTACC+TGG 0.546199 3_2:-48254938 Msa0408440:intron
ACCAGTAAACAGAGCTAAGT+GGG 0.547962 3_2:+48254042 None:intergenic
CTTTGGAAAGTGAAAGAGAG+AGG 0.549012 3_2:+48254542 None:intergenic
AATACTGGTTTGAATCGTTG+TGG 0.549440 3_2:-48255557 Msa0408440:CDS
GAATGATGATGAGTTGGTGT+TGG 0.554156 3_2:+48254671 None:intergenic
AAAGAGTTGCAGGCTTAGAT+GGG 0.554365 3_2:-48255534 Msa0408440:CDS
AAAGTGAAAGAGAGAGGTGA+AGG 0.559723 3_2:+48254548 None:intergenic
AGTTACTTGAGCTTAAATGA+AGG 0.562252 3_2:-48254104 Msa0408440:CDS
ATGATGATGAGTTGGTGTTG+GGG 0.574579 3_2:+48254673 None:intergenic
TCTTGATGAGAGGTTAAAGA+AGG 0.579107 3_2:+48254410 None:intergenic
TCCTCGATCGGATTCCAACA+AGG 0.580343 3_2:+48254331 None:intergenic
TTGAAGACTAAAGTTGGGAC+TGG 0.580753 3_2:+48254472 None:intergenic
TTGTGAAGGTGTTGTTGGTG+TGG 0.581458 3_2:+48254808 None:intergenic
TATGTGACAAAACATGGTGA+AGG 0.582992 3_2:-48255602 Msa0408440:CDS
GACCAGTAAACAGAGCTAAG+TGG 0.584913 3_2:+48254041 None:intergenic
CCTAAAACTATCTTGATGAG+AGG 0.588658 3_2:+48254400 None:intergenic
CGTTCAGTCTTCTAGTGGTG+TGG 0.598598 3_2:-48253121 Msa0408440:CDS
GGTGGTGGTGGTTATAGTGG+AGG 0.600684 3_2:-48255689 Msa0408440:CDS
ATGTGACAAAACATGGTGAA+GGG 0.604926 3_2:-48255601 Msa0408440:CDS
CGTTGTTGTCTATGTTGGAG+TGG 0.609374 3_2:+48254635 None:intergenic
CCAATCATGAATTTGCATTG+TGG 0.609664 3_2:+48253182 None:intergenic
AAACAACGGTTGCTACACTT+GGG 0.612073 3_2:-48252992 Msa0408440:CDS
GTGTTGGGGATAAAGGGTGA+AGG 0.615146 3_2:+48254687 None:intergenic
TTATTTGTTGTGTTTGTGAG+AGG 0.615768 3_2:+48253045 None:intergenic
ATCAAACGTCGTCAAAGACA+AGG 0.623150 3_2:-48254875 Msa0408440:CDS
GTTGGTGTGACGCATTGTGA+AGG 0.629713 3_2:+48254794 None:intergenic
CGATGAAGAAACTCCTCGAT+CGG 0.633510 3_2:+48254319 None:intergenic
ACCAACGTTCAGTCTTCTAG+TGG 0.636993 3_2:-48253126 Msa0408440:CDS
GGAAAGAGGCGGTGACGGTG+AGG 0.637983 3_2:-48255723 Msa0408440:CDS
GAAGAAGATGACAATGGTGT+AGG 0.639677 3_2:+48254572 None:intergenic
ATGATGGAAAGAGGCGGTGA+CGG 0.639978 3_2:-48255728 Msa0408440:CDS
ATAGATTATGTGACAAAACA+TGG 0.644602 3_2:-48255608 Msa0408440:CDS
AATAATAATAATGAAAACAA+CGG 0.646534 3_2:-48253006 Msa0408440:CDS
CCTCGATCGGATTCCAACAA+GGG 0.648357 3_2:+48254332 None:intergenic
CCCTTGTTGGAATCCGATCG+AGG 0.653982 3_2:-48254332 Msa0408440:CDS
TCATGTTCGTCTGAATAGAG+AGG 0.657510 3_2:+48254848 None:intergenic
CGAAAAGGTGTAGATAAGAG+TGG 0.660896 3_2:+48254512 None:intergenic
TTATAGTGGAGGTGGTGATG+AGG 0.662069 3_2:-48255678 Msa0408440:CDS
GGGTCCTTGGACAACAGCAG+AGG 0.663164 3_2:-48255642 Msa0408440:CDS
TTTGGTATGATGGAAAGAGG+CGG 0.701621 3_2:-48255734 Msa0408440:CDS
ACCACTAGAAGACTGAACGT+TGG 0.706322 3_2:+48253125 None:intergenic
GAAGTCTCTATGAATGTGTG+AGG 0.713841 3_2:+48254596 None:intergenic
GAAGGTGAAGAAGATGACAA+TGG 0.715197 3_2:+48254566 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTATTACATTAAATC+TGG - chr3_2:48254849-48254868 Msa0408440:CDS 10.0%
!! AATAATAATAATGAAAACAA+CGG - chr3_2:48255748-48255767 Msa0408440:CDS 10.0%
!!! CGATCTTTAAAAATTTATTT+AGG - chr3_2:48253509-48253528 Msa0408440:intron 15.0%
!!! ATTTTGTTTGCATTTTTATT+TGG - chr3_2:48254806-48254825 Msa0408440:CDS 15.0%
!! CTATTTAATTACAATTAAGT+TGG - chr3_2:48255202-48255221 Msa0408440:intron 15.0%
!!! AATGATGAAAATTTGTTCTT+TGG - chr3_2:48253002-48253021 Msa0408440:CDS 20.0%
!!! TTACAACAACATTTTAGTTT+AGG + chr3_2:48253409-48253428 None:intergenic 20.0%
!! ATATTAATTGTTGTGTATTG+TGG - chr3_2:48253803-48253822 Msa0408440:intron 20.0%
!! ATATTCTATATTTGATATCC+GGG + chr3_2:48255043-48255062 None:intergenic 20.0%
!! CATATTCTATATTTGATATC+CGG + chr3_2:48255044-48255063 None:intergenic 20.0%
!! CCAAATGAAAAATCAATTTA+TGG + chr3_2:48255142-48255161 None:intergenic 20.0%
!!! CCATAAATTGATTTTTCATT+TGG - chr3_2:48255139-48255158 Msa0408440:intron 20.0%
!! TGTAAATGTTATTCTTAGAT+AGG - chr3_2:48255171-48255190 Msa0408440:intron 20.0%
!! GTAAATGTTATTCTTAGATA+GGG - chr3_2:48255172-48255191 Msa0408440:intron 20.0%
!! AAATTTGTTCTTTGGTATGA+TGG - chr3_2:48253010-48253029 Msa0408440:CDS 25.0%
! ATAGATTATGTGACAAAACA+TGG - chr3_2:48253146-48253165 Msa0408440:CDS 25.0%
!! TTTAGTTTAGGTTAGACTAA+AGG + chr3_2:48253397-48253416 None:intergenic 25.0%
! ATATTCATCATACTAAACCT+AGG - chr3_2:48253549-48253568 Msa0408440:intron 25.0%
! TATTCATCATACTAAACCTA+GGG - chr3_2:48253550-48253569 Msa0408440:intron 25.0%
! GAATGATTATTGATCGAAAT+TGG + chr3_2:48253672-48253691 None:intergenic 25.0%
! ACAATGAAATAAAGAACTAC+TGG - chr3_2:48253847-48253866 Msa0408440:intron 25.0%
! TGATTGAAAAACTCAAACTT+TGG + chr3_2:48254011-48254030 None:intergenic 25.0%
!! AAACTTGAGTTGTATTGAAT+TGG + chr3_2:48254383-48254402 None:intergenic 25.0%
!! TTATTGGTCTGAAAAGAATT+AGG + chr3_2:48254560-48254579 None:intergenic 25.0%
! GAAGGAAATGATATGTTTAA+TGG - chr3_2:48254668-48254687 Msa0408440:CDS 25.0%
!!! TAAATCTGGTTCTTTTTGTT+TGG - chr3_2:48254863-48254882 Msa0408440:CDS 25.0%
!! TGATATGAACTGACATTTTA+AGG - chr3_2:48254906-48254925 Msa0408440:CDS 25.0%
! TTCAAGTGTTAGTATTATGT+AGG + chr3_2:48255367-48255386 None:intergenic 25.0%
!! GATTTGATTGATTTATATGC+AGG - chr3_2:48255466-48255485 Msa0408440:CDS 25.0%
!! TTCATAAATTTGCTTAAGTC+TGG + chr3_2:48255514-48255533 None:intergenic 25.0%
TGATGAGGCAAATTTGAAAA+AGG - chr3_2:48253091-48253110 Msa0408440:CDS 30.0%
GATGAGGCAAATTTGAAAAA+GGG - chr3_2:48253092-48253111 Msa0408440:CDS 30.0%
AATGCAGTTCAAAGAAATAC+TGG - chr3_2:48253182-48253201 Msa0408440:CDS 30.0%
TTAAGACCCAATTTGAAGAA+AGG - chr3_2:48253251-48253270 Msa0408440:CDS 30.0%
AATGCACCTTTCTTCAAATT+GGG + chr3_2:48253260-48253279 None:intergenic 30.0%
AAATGCACCTTTCTTCAAAT+TGG + chr3_2:48253261-48253280 None:intergenic 30.0%
AACAATGAGTTTCTCTTCTT+CGG + chr3_2:48253288-48253307 None:intergenic 30.0%
! ATGCTCAATTTGGTAACAAA+TGG - chr3_2:48253315-48253334 Msa0408440:intron 30.0%
! TGCTCAATTTGGTAACAAAT+GGG - chr3_2:48253316-48253335 Msa0408440:intron 30.0%
GATTATTGATCGAAATTGGA+TGG + chr3_2:48253668-48253687 None:intergenic 30.0%
! ACTTTGGTGTAATGTTGTTA+GGG + chr3_2:48253995-48254014 None:intergenic 30.0%
! AACTTTGGTGTAATGTTGTT+AGG + chr3_2:48253996-48254015 None:intergenic 30.0%
! GATGTTGTTGTTGTTGATAT+TGG + chr3_2:48254043-48254062 None:intergenic 30.0%
!! AGTCTTGAATATTGGTTTGA+AGG + chr3_2:48254491-48254510 None:intergenic 30.0%
! CTGATGATAGTCTTGAATAT+TGG + chr3_2:48254499-48254518 None:intergenic 30.0%
! TCTTTTCAGACCAATAATAG+TGG - chr3_2:48254563-48254582 Msa0408440:CDS 30.0%
ACCAATAATAGTGGCTTAAT+GGG - chr3_2:48254572-48254591 Msa0408440:CDS 30.0%
! CTTAATGGGAGATCTTTTAA+TGG - chr3_2:48254586-48254605 Msa0408440:CDS 30.0%
CTGGTCAAAATTCAAAGAAA+AGG - chr3_2:48254627-48254646 Msa0408440:CDS 30.0%
AGTTACTTGAGCTTAAATGA+AGG - chr3_2:48254650-48254669 Msa0408440:CDS 30.0%
!! ATGAACTGACATTTTAAGGA+TGG - chr3_2:48254910-48254929 Msa0408440:CDS 30.0%
!! TAATCAGCAACTTATTTTCC+CGG - chr3_2:48255022-48255041 Msa0408440:intron 30.0%
AAGTCATTGTAGTTACTACA+TGG - chr3_2:48255341-48255360 Msa0408440:intron 30.0%
ATCTAGCTAGTATCATTGAT+TGG - chr3_2:48255444-48255463 Msa0408440:CDS 30.0%
!! TTATTTGTTGTGTTTGTGAG+AGG + chr3_2:48255712-48255731 None:intergenic 30.0%
! TTCTTTGGTATGATGGAAAG+AGG - chr3_2:48253017-48253036 Msa0408440:CDS 35.0%
CAAATTTGAAAAAGGGTCCT+TGG - chr3_2:48253099-48253118 Msa0408440:CDS 35.0%
TATGTGACAAAACATGGTGA+AGG - chr3_2:48253152-48253171 Msa0408440:CDS 35.0%
ATGTGACAAAACATGGTGAA+GGG - chr3_2:48253153-48253172 Msa0408440:CDS 35.0%
!! AATACTGGTTTGAATCGTTG+TGG - chr3_2:48253197-48253216 Msa0408440:CDS 35.0%
ACAATGAGTTTCTCTTCTTC+GGG + chr3_2:48253287-48253306 None:intergenic 35.0%
GTTGAACTTCATGCTCAATT+TGG - chr3_2:48253305-48253324 Msa0408440:intron 35.0%
! GTGATCAAGATGCACATTTT+TGG + chr3_2:48253722-48253741 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+AGG + chr3_2:48253837-48253856 None:intergenic 35.0%
! GTTGTTGTTGTTGATATTGG+TGG + chr3_2:48254040-48254059 None:intergenic 35.0%
!! AATGATGATGAGTTGGTGTT+GGG + chr3_2:48254085-48254104 None:intergenic 35.0%
! TGAAGCGCAATTTTGTGTTA+CGG + chr3_2:48254315-48254334 None:intergenic 35.0%
TCTTGATGAGAGGTTAAAGA+AGG + chr3_2:48254347-48254366 None:intergenic 35.0%
CCTAAAACTATCTTGATGAG+AGG + chr3_2:48254357-48254376 None:intergenic 35.0%
! CCTCTCATCAAGATAGTTTT+AGG - chr3_2:48254354-48254373 Msa0408440:CDS 35.0%
ATACTTTCATACTCCCTTGT+TGG - chr3_2:48254409-48254428 Msa0408440:CDS 35.0%
TTTACCTTTCTCCACAAAGT+TGG - chr3_2:48254460-48254479 Msa0408440:CDS 35.0%
ATCATCAGAGCAAGATGTTA+AGG - chr3_2:48254511-48254530 Msa0408440:CDS 35.0%
GACCAATAATAGTGGCTTAA+TGG - chr3_2:48254571-48254590 Msa0408440:CDS 35.0%
TCCCATTAAGCCACTATTAT+TGG + chr3_2:48254576-48254595 None:intergenic 35.0%
!! GTTTACTGGTCTTCTAATTC+AGG - chr3_2:48254725-48254744 Msa0408440:CDS 35.0%
TATATGTGTCAGTATCATGC+CGG + chr3_2:48255416-48255435 None:intergenic 35.0%
ATATGCAGGACAAAAACCAA+AGG - chr3_2:48255480-48255499 Msa0408440:CDS 35.0%
TGAATTTGCATTGTGGAAGA+AGG + chr3_2:48255568-48255587 None:intergenic 35.0%
CCAATCATGAATTTGCATTG+TGG + chr3_2:48255575-48255594 None:intergenic 35.0%
CCACAATGCAAATTCATGAT+TGG - chr3_2:48255572-48255591 Msa0408440:CDS 35.0%
! GTGATGGCAGATGAAAATTT+TGG - chr3_2:48255655-48255674 Msa0408440:CDS 35.0%
AGAGGAAACAATGAAGCTAT+AGG + chr3_2:48255694-48255713 None:intergenic 35.0%
! TTTGGTATGATGGAAAGAGG+CGG - chr3_2:48253020-48253039 Msa0408440:CDS 40.0%
CAAAACATGGTGAAGGGAAT+TGG - chr3_2:48253159-48253178 Msa0408440:CDS 40.0%
AAAGAGTTGCAGGCTTAGAT+GGG - chr3_2:48253220-48253239 Msa0408440:CDS 40.0%
TGTATTGTGGCATAGTTACC+TGG - chr3_2:48253816-48253835 Msa0408440:intron 40.0%
ATCAAACGTCGTCAAAGACA+AGG - chr3_2:48253879-48253898 Msa0408440:intron 40.0%
TCATGTTCGTCTGAATAGAG+AGG + chr3_2:48253909-48253928 None:intergenic 40.0%
! TTGTTAGGGTTTGTTCCTGT+TGG + chr3_2:48253981-48254000 None:intergenic 40.0%
! GTTGTTGTTGATATTGGTGG+TGG + chr3_2:48254037-48254056 None:intergenic 40.0%
!! ATGATGATGAGTTGGTGTTG+GGG + chr3_2:48254084-48254103 None:intergenic 40.0%
!! GAATGATGATGAGTTGGTGT+TGG + chr3_2:48254086-48254105 None:intergenic 40.0%
! AGAGGAGAATGATGATGAGT+TGG + chr3_2:48254092-48254111 None:intergenic 40.0%
GTTGTCGTTGTTGTCTATGT+TGG + chr3_2:48254127-48254146 None:intergenic 40.0%
GAAGTCTCTATGAATGTGTG+AGG + chr3_2:48254161-48254180 None:intergenic 40.0%
GAAGAAGATGACAATGGTGT+AGG + chr3_2:48254185-48254204 None:intergenic 40.0%
GAAGGTGAAGAAGATGACAA+TGG + chr3_2:48254191-48254210 None:intergenic 40.0%
AAAGTGAAAGAGAGAGGTGA+AGG + chr3_2:48254209-48254228 None:intergenic 40.0%
! CTTTGGAAAGTGAAAGAGAG+AGG + chr3_2:48254215-48254234 None:intergenic 40.0%
! CGAAAAGGTGTAGATAAGAG+TGG + chr3_2:48254245-48254264 None:intergenic 40.0%
! CGATAACGTTTGAAGCGAAA+AGG + chr3_2:48254260-48254279 None:intergenic 40.0%
TTGAAGACTAAAGTTGGGAC+TGG + chr3_2:48254285-48254304 None:intergenic 40.0%
GGGACTTGAAGACTAAAGTT+GGG + chr3_2:48254290-48254309 None:intergenic 40.0%
AGGGACTTGAAGACTAAAGT+TGG + chr3_2:48254291-48254310 None:intergenic 40.0%
! CGCAATTTTGTGTTACGGAA+GGG + chr3_2:48254310-48254329 None:intergenic 40.0%
GAGAGGTTAAAGAAGGATCA+TGG + chr3_2:48254340-48254359 None:intergenic 40.0%
AGCTAAGTGGGAAATCATCT+AGG + chr3_2:48254703-48254722 None:intergenic 40.0%
ACCAGTAAACAGAGCTAAGT+GGG + chr3_2:48254715-48254734 None:intergenic 40.0%
AAAACAACGGTTGCTACACT+TGG - chr3_2:48255761-48255780 Msa0408440:CDS 40.0%
AAACAACGGTTGCTACACTT+GGG - chr3_2:48255762-48255781 Msa0408440:CDS 40.0%
! TTATAGTGGAGGTGGTGATG+AGG - chr3_2:48253076-48253095 Msa0408440:CDS 45.0%
ATCGTTGTGGAAAGAGTTGC+AGG - chr3_2:48253210-48253229 Msa0408440:CDS 45.0%
GAAAGAGTTGCAGGCTTAGA+TGG - chr3_2:48253219-48253238 Msa0408440:CDS 45.0%
! TGGTAACAAATGGGCTCGAA+TGG - chr3_2:48253325-48253344 Msa0408440:intron 45.0%
CATACTAAACCTAGGGACCA+AGG - chr3_2:48253557-48253576 Msa0408440:intron 45.0%
ATTGTGACTGCATGCAACCT+TGG + chr3_2:48253577-48253596 None:intergenic 45.0%
AGGTTGCATGCAGTCACAAT+TGG - chr3_2:48253577-48253596 Msa0408440:intron 45.0%
!! TTGTGAAGGTGTTGTTGGTG+TGG + chr3_2:48253949-48253968 None:intergenic 45.0%
!! ACGCATTGTGAAGGTGTTGT+TGG + chr3_2:48253954-48253973 None:intergenic 45.0%
!! GAGTTGGTGTTGGGGATAAA+GGG + chr3_2:48254076-48254095 None:intergenic 45.0%
!! TGAGTTGGTGTTGGGGATAA+AGG + chr3_2:48254077-48254096 None:intergenic 45.0%
CGTTGTTGTCTATGTTGGAG+TGG + chr3_2:48254122-48254141 None:intergenic 45.0%
ATAAGAGTGGTGCAGGTCTT+TGG + chr3_2:48254232-48254251 None:intergenic 45.0%
! GCGCAATTTTGTGTTACGGA+AGG + chr3_2:48254311-48254330 None:intergenic 45.0%
CGATGAAGAAACTCCTCGAT+CGG + chr3_2:48254438-48254457 None:intergenic 45.0%
AGCTCCAACTTTGTGGAGAA+AGG + chr3_2:48254467-48254486 None:intergenic 45.0%
TGAAGGTAGCTCCAACTTTG+TGG + chr3_2:48254474-48254493 None:intergenic 45.0%
GAAGCACAAACACTAGCATC+TGG - chr3_2:48254608-48254627 Msa0408440:CDS 45.0%
GTGGGAAATCATCTAGGCTT+TGG + chr3_2:48254697-48254716 None:intergenic 45.0%
!! TCCCACTTAGCTCTGTTTAC+TGG - chr3_2:48254711-48254730 Msa0408440:CDS 45.0%
GACCAGTAAACAGAGCTAAG+TGG + chr3_2:48254716-48254735 None:intergenic 45.0%
AAGTCTGGTGCTTCTTCCTT+TGG + chr3_2:48255499-48255518 None:intergenic 45.0%
ACCAACGTTCAGTCTTCTAG+TGG - chr3_2:48255628-48255647 Msa0408440:CDS 45.0%
ACCACTAGAAGACTGAACGT+TGG + chr3_2:48255632-48255651 None:intergenic 45.0%
!! TAAAAATACATTAATTTATA+AGG - chr3_2:48255296-48255315 Msa0408440:intron 5.0%
! ATGATGGAAAGAGGCGGTGA+CGG - chr3_2:48253026-48253045 Msa0408440:CDS 50.0%
!! AGTGGTGGTGGTGGTTATAG+TGG - chr3_2:48253062-48253081 Msa0408440:CDS 50.0%
GTATCCTCTGCTGTTGTCCA+AGG + chr3_2:48253119-48253138 None:intergenic 50.0%
! GTTGGTGTGGTTGGTGTGTT+GGG + chr3_2:48253936-48253955 None:intergenic 50.0%
! TGTTGGTGTGGTTGGTGTGT+TGG + chr3_2:48253937-48253956 None:intergenic 50.0%
!! GAAGGTGTTGTTGGTGTGGT+TGG + chr3_2:48253945-48253964 None:intergenic 50.0%
GTTGGTGTGACGCATTGTGA+AGG + chr3_2:48253963-48253982 None:intergenic 50.0%
TCACAATGCGTCACACCAAC+AGG - chr3_2:48253963-48253982 Msa0408440:intron 50.0%
GTGTTGGGGATAAAGGGTGA+AGG + chr3_2:48254070-48254089 None:intergenic 50.0%
TGTTGGAGTGGTGAAGAGAG+AGG + chr3_2:48254110-48254129 None:intergenic 50.0%
GGTGTAGATAAGAGTGGTGC+AGG + chr3_2:48254239-48254258 None:intergenic 50.0%
CCTCGATCGGATTCCAACAA+GGG + chr3_2:48254425-48254444 None:intergenic 50.0%
TCCTCGATCGGATTCCAACA+AGG + chr3_2:48254426-48254445 None:intergenic 50.0%
ACATGTTCGATGTCCCACAC+CGG - chr3_2:48255394-48255413 Msa0408440:intron 50.0%
TGTCAGTATCATGCCGGTGT+GGG + chr3_2:48255410-48255429 None:intergenic 50.0%
CGTTCAGTCTTCTAGTGGTG+TGG - chr3_2:48255633-48255652 Msa0408440:CDS 50.0%
GTCTTCTAGTGGTGTGGTGA+TGG - chr3_2:48255639-48255658 Msa0408440:CDS 50.0%
!! GGTGGTGGTGGTTATAGTGG+AGG - chr3_2:48253065-48253084 Msa0408440:CDS 55.0%
! GGTGGTGGTTATAGTGGAGG+TGG - chr3_2:48253068-48253087 Msa0408440:CDS 55.0%
ATGGGCTCGAATGGCTGCTT+TGG - chr3_2:48253334-48253353 Msa0408440:intron 55.0%
TGCATGCAACCTTGGTCCCT+AGG + chr3_2:48253569-48253588 None:intergenic 55.0%
CCCTTGTTGGAATCCGATCG+AGG - chr3_2:48254422-48254441 Msa0408440:CDS 55.0%
GTGTCAGTATCATGCCGGTG+TGG + chr3_2:48255411-48255430 None:intergenic 55.0%
! GAAAGAGGCGGTGACGGTGA+GGG - chr3_2:48253032-48253051 Msa0408440:CDS 60.0%
GGGTCCTTGGACAACAGCAG+AGG - chr3_2:48253112-48253131 Msa0408440:CDS 60.0%
! GGAAAGAGGCGGTGACGGTG+AGG - chr3_2:48253031-48253050 Msa0408440:CDS 65.0%
GACGGTGAGGGTGGCAGTAG+TGG - chr3_2:48253044-48253063 Msa0408440:CDS 65.0%
GGTGAGGGTGGCAGTAGTGG+TGG - chr3_2:48253047-48253066 Msa0408440:CDS 65.0%
GAGGGTGGCAGTAGTGGTGG+TGG - chr3_2:48253050-48253069 Msa0408440:CDS 65.0%
!! GGTGGCAGTAGTGGTGGTGG+TGG - chr3_2:48253053-48253072 Msa0408440:CDS 65.0%
! AGAGGCGGTGACGGTGAGGG+TGG - chr3_2:48253035-48253054 Msa0408440:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 48252969 48255807 48252969 ID=Msa0408440;Name=Msa0408440
chr3_2 mRNA 48252969 48255807 48252969 ID=Msa0408440-mRNA-1;Parent=Msa0408440;Name=Msa0408440-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|3|0|540
chr3_2 exon 48255421 48255807 48255421 ID=Msa0408440-mRNA-1:exon:9365;Parent=Msa0408440-mRNA-1
chr3_2 exon 48254030 48254945 48254030 ID=Msa0408440-mRNA-1:exon:9364;Parent=Msa0408440-mRNA-1
chr3_2 exon 48252969 48253288 48252969 ID=Msa0408440-mRNA-1:exon:9363;Parent=Msa0408440-mRNA-1
chr3_2 CDS 48255421 48255807 48255421 ID=Msa0408440-mRNA-1:cds;Parent=Msa0408440-mRNA-1
chr3_2 CDS 48254030 48254945 48254030 ID=Msa0408440-mRNA-1:cds;Parent=Msa0408440-mRNA-1
chr3_2 CDS 48252969 48253288 48252969 ID=Msa0408440-mRNA-1:cds;Parent=Msa0408440-mRNA-1
Gene Sequence

>Msa0408440

ATGGAACACATGACAAATATTGTTGATGCAGTAAATGATGAAAATTTGTTCTTTGGTATGATGGAAAGAGGCGGTGACGGTGAGGGTGGCAGTAGTGGTGGTGGTGGTTATAGTGGAGGTGGTGATGAGGCAAATTTGAAAAAGGGTCCTTGGACAACAGCAGAGGATACAATTTTGATAGATTATGTGACAAAACATGGTGAAGGGAATTGGAATGCAGTTCAAAGAAATACTGGTTTGAATCGTTGTGGAAAGAGTTGCAGGCTTAGATGGGCTAATCATTTAAGACCCAATTTGAAGAAAGGTGCATTTTCTCCCGAAGAAGAGAAACTCATTGTTGAACTTCATGCTCAATTTGGTAACAAATGGGCTCGAATGGCTGCTTTGTTACCTGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACAAGAATCAAACGTCGTCAAAGACAAGGTCTTCCTCTCTATTCAGACGAACATGATCGTCCCAACACACCAACCACACCAACAACACCTTCACAATGCGTCACACCAACAGGAACAAACCCTAACAACATTACACCAAAGTTTGAGTTTTTCAATCAAAACCACCACCAATATCAACAACAACAACATCAACACCTTCACCCTTTATCCCCAACACCAACTCATCATCATTCTCCTCTCTCTTCACCACTCCAACATAGACAACAACGACAACATTCTTATTCTCCTCACACATTCATAGAGACTTCACCTACACCATTGTCATCTTCTTCACCTTCACCTCTCTCTTTCACTTTCCAAAGACCTGCACCACTCTTATCTACACCTTTTCGCTTCAAACGTTATCGTTCCAGTCCCAACTTTAGTCTTCAAGTCCCTTCCGTAACACAAAATTGCGCTTCACTCCATGATCCTTCTTTAACCTCTCATCAAGATAGTTTTAGGTTTCCAATTCAATACAACTCAAGTTTTTCTCAATACTTTCATACTCCCTTGTTGGAATCCGATCGAGGAGTTTCTTCATCGTCTTTACCTTTCTCCACAAAGTTGGAGCTACCTTCAAACCAATATTCAAGACTATCATCAGAGCAAGATGTTAAGGTTAACAATATTGAGTTCAATGATCCTAATTCTTTTCAGACCAATAATAGTGGCTTAATGGGAGATCTTTTAATGGAAGCACAAACACTAGCATCTGGTCAAAATTCAAAGAAAAGGAGTTACTTGAGCTTAAATGAAGGAAATGATATGTTTAATGGTTGCCAAAGCCTAGATGATTTCCCACTTAGCTCTGTTTACTGGTCTTCTAATTCAGGACAAAAACCAAAGGAAGAAGCACCAGACTTAAGCAAATTTATGAATGATGACATCTCAACAATGTTAACTGTGACGCCTTCTTCCACAATGCAAATTCATGATTGGAATAATAAGAACAATAGCAATGCATCAGAAGTAACCAACGTTCAGTCTTCTAGTGGTGTGGTGATGGCAGATGAAAATTTTGGACTTGATATCAAGCCTATAGCTTCATTGTTTCCTCTCACAAACACAACAAATAATAGTAATGATGATAATAATAATAATAATGAAAACAACGGTTGCTACACTTGGGACAATTTACCTGAACTCTGTTAA
Protein sequence

>Msa0408440

MEHMTNIVDAVNDENLFFGMMERGGDGEGGSSGGGGYSGGGDEANLKKGPWTTAEDTILIDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHLRPNLKKGAFSPEEEKLIVELHAQFGNKWARMAALLPGRTDNEIKNYWNTRIKRRQRQGLPLYSDEHDRPNTPTTPTTPSQCVTPTGTNPNNITPKFEFFNQNHHQYQQQQHQHLHPLSPTPTHHHSPLSSPLQHRQQRQHSYSPHTFIETSPTPLSSSSPSPLSFTFQRPAPLLSTPFRFKRYRSSPNFSLQVPSVTQNCASLHDPSLTSHQDSFRFPIQYNSSFSQYFHTPLLESDRGVSSSSLPFSTKLELPSNQYSRLSSEQDVKVNNIEFNDPNSFQTNNSGLMGDLLMEAQTLASGQNSKKRSYLSLNEGNDMFNGCQSLDDFPLSSVYWSSNSGQKPKEEAPDLSKFMNDDISTMLTVTPSSTMQIHDWNNKNNSNASEVTNVQSSSGVVMADENFGLDIKPIASLFPLTNTTNNSNDDNNNNNENNGCYTWDNLPELC*