AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0408600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0408600 MtrunA17_Chr3g0099331 98.319 238 4 0 1 238 1 238 1.46e-179 494
Msa0408600 MtrunA17_Chr4g0057971 56.250 240 102 1 4 240 6 245 2.78e-100 293
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0408600 AT5G63280.1 55.020 249 98 3 26 260 23 271 2.45e-98 289
Msa0408600 AT5G40710.1 62.245 196 74 0 43 238 44 239 7.48e-94 277
Msa0408600 AT5G40710.2 64.706 153 54 0 43 195 44 196 2.73e-75 229

Find 83 sgRNAs with CRISPR-Local

Find 601 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACTCCAATTTACTTAATT+TGG 0.122652 3_2:-48522788 Msa0408600:intron
AATGTTATTGTTCAGAATTC+TGG 0.162180 3_2:-48523206 Msa0408600:intron
TCAACTTAGTAAACAAATTT+AGG 0.178442 3_2:+48514378 None:intergenic
AAGAACAATGAATAAGATTT+TGG 0.184207 3_2:-48524148 Msa0408600:exon
TTGCCACGTGTTAAAAGTTT+TGG 0.226819 3_2:+48524332 None:intergenic
TCATACCAAATTAAGTAAAT+TGG 0.245660 3_2:+48522783 None:intergenic
TGTGACCATGAAATTAATTC+TGG 0.266563 3_2:-48521785 Msa0408600:CDS
AACACGTGGCAAATTCTAAT+AGG 0.326262 3_2:-48524321 Msa0408600:five_prime_UTR
CCTGCAGCGAGCCGGCTTCA+TGG 0.327309 3_2:-48521594 Msa0408600:intron
GGAAATAACATGAACCTTTA+CGG 0.331555 3_2:-48514408 Msa0408600:three_prime_UTR
GTATTTCAGAGGATTGAAAA+AGG 0.338241 3_2:-48520013 Msa0408600:intron
GCTGCAGGACCCTCGTTAAC+TGG 0.349350 3_2:+48521609 None:intergenic
TTGACCCAGAATTAATTTCA+TGG 0.350995 3_2:+48521780 None:intergenic
TCGTGTTCTTGTTGCTTACA+AGG 0.355231 3_2:-48524107 Msa0408600:CDS
AGCCGAATTCATTGTATACT+TGG 0.373737 3_2:-48519738 Msa0408600:three_prime_UTR
ACAAAATCTAAGCCTGTGTT+TGG 0.380893 3_2:+48519591 None:intergenic
TCAAATTACCCTGCGCCCTC+TGG 0.382051 3_2:+48521424 None:intergenic
CTTCTTGCACAGACTCGGTT+TGG 0.408494 3_2:+48524271 None:intergenic
ACTGTGTCGTGGTTCCATTC+TGG 0.410661 3_2:-48524296 Msa0408600:five_prime_UTR
TTATTTCTTGCTGCAGCAGC+AGG 0.412858 3_2:+48521740 None:intergenic
CACCAAGTATACAATGAATT+CGG 0.423230 3_2:+48519736 None:intergenic
TCTCTATATATATCATTGTC+AGG 0.427562 3_2:+48522916 None:intergenic
ATCCACGGCCACACCACATT+GGG 0.429683 3_2:+48519677 None:intergenic
TGCTATTTGCAAGTGACAGT+TGG 0.459377 3_2:-48519821 Msa0408600:three_prime_UTR
ATTGTTCAGAATTCTGGATC+AGG 0.460914 3_2:-48523200 Msa0408600:intron
CCATGAAGCCGGCTCGCTGC+AGG 0.478890 3_2:+48521594 None:intergenic
GCAGTATTTGACGACATTTG+TGG 0.483411 3_2:-48522980 Msa0408600:intron
GAGAAAGAAGTAGAATAGCT+TGG 0.485109 3_2:-48523144 Msa0408600:CDS
TGTGATGCTCACACCTGCAC+TGG 0.492800 3_2:-48521464 Msa0408600:CDS
GTGACCATGAAATTAATTCT+GGG 0.499220 3_2:-48521784 Msa0408600:CDS
GTCCCAATGTGGTGTGGCCG+TGG 0.500354 3_2:-48519679 Msa0408600:three_prime_UTR
GCTCACACCTGCACTGGACG+TGG 0.502873 3_2:-48521458 Msa0408600:CDS
CGTGTTCTTGTTGCTTACAA+GGG 0.511007 3_2:-48524106 Msa0408600:CDS
AATCCACGGCCACACCACAT+TGG 0.511319 3_2:+48519676 None:intergenic
AGGCTTTCCACGTCCAGTGC+AGG 0.511555 3_2:+48521451 None:intergenic
ACAGGTTGAGAGCTTCTAAA+GGG 0.514372 3_2:+48519922 None:intergenic
CTCATATAGATATAAATGAA+TGG 0.514723 3_2:-48522876 Msa0408600:CDS
CAATGATATATATAGAGATC+AGG 0.516644 3_2:-48522911 Msa0408600:CDS
AGATGCTTCTTGCACAGACT+CGG 0.518860 3_2:+48524266 None:intergenic
TATTTGCAAGTGACAGTTGG+AGG 0.519396 3_2:-48519818 Msa0408600:three_prime_UTR
AACAGGTTGAGAGCTTCTAA+AGG 0.522436 3_2:+48519921 None:intergenic
TGTTTGGAACCACGTCGAAA+AGG 0.523202 3_2:+48519607 None:intergenic
ACCCTGCGCCCTCTGGAGAA+AGG 0.523388 3_2:+48521431 None:intergenic
AGCCTTTCTCCAGAGGGCGC+AGG 0.526816 3_2:-48521433 Msa0408600:CDS
ACGAGGGTCCTGCAGCGAGC+CGG 0.531828 3_2:-48521602 Msa0408600:CDS
TTCGACGTGGTTCCAAACAC+AGG 0.535727 3_2:-48519603 Msa0408600:three_prime_UTR
GAATGATCTAATGATTATGA+TGG 0.543085 3_2:+48519944 None:intergenic
ATAATATCTCAAGAAGGTGC+AGG 0.547108 3_2:-48522945 Msa0408600:CDS
TTATAGCTTTACAAAATCCA+CGG 0.558228 3_2:+48519662 None:intergenic
AAGTTGTGATGTAAACATAC+AGG 0.559796 3_2:+48514320 None:intergenic
CTGAGGCGTGTCTCACAAGC+CGG 0.560885 3_2:-48519979 Msa0408600:CDS
GCCTTTCTCCAGAGGGCGCA+GGG 0.563120 3_2:-48521432 Msa0408600:intron
TGGAAAACAACTATCAGCTA+TGG 0.566317 3_2:+48521629 None:intergenic
ATTTAGGAAATACACCGTAA+AGG 0.568478 3_2:+48514394 None:intergenic
CACATACATCTGCTAAGCAC+CGG 0.569311 3_2:+48521819 None:intergenic
GACTCGGTTTGGTACCAGAA+TGG 0.569936 3_2:+48524282 None:intergenic
TTGCAAGTGACAGTTGGAGG+AGG 0.570661 3_2:-48519815 Msa0408600:three_prime_UTR
AAAGTAACAGTGTATCTGAC+GGG 0.582718 3_2:-48519891 Msa0408600:three_prime_UTR
CTCTATATATATCATTGTCA+GGG 0.590660 3_2:+48522917 None:intergenic
TGTGCATGATATCGCTAACA+AGG 0.592089 3_2:-48514430 Msa0408600:three_prime_UTR
ATATTGAAATACCATGAAGC+CGG 0.593494 3_2:+48521583 None:intergenic
TTGCAGCATCTGAATCTACA+TGG 0.597085 3_2:+48523623 None:intergenic
CGGTGCTTAGCAGATGTATG+TGG 0.600256 3_2:-48521818 Msa0408600:CDS
ATGTAGATTCAGATGCTGCA+AGG 0.607887 3_2:-48523621 Msa0408600:intron
CGTGGAAAGCCTTTCTCCAG+AGG 0.614403 3_2:-48521440 Msa0408600:CDS
GAAAGTAACAGTGTATCTGA+CGG 0.622150 3_2:-48519892 Msa0408600:three_prime_UTR
AGCTTGGAAGATCGTTCAAG+AGG 0.626181 3_2:-48523128 Msa0408600:intron
TCTCACGTCCCAATGTGGTG+TGG 0.631638 3_2:-48519685 Msa0408600:three_prime_UTR
AAGAAATAAGCATATATGTG+AGG 0.634147 3_2:-48521726 Msa0408600:intron
ATGAAAATAGTCAACCAACA+TGG 0.635343 3_2:+48514458 None:intergenic
TCTAATAGGCCACTGTGTCG+TGG 0.642879 3_2:-48524307 Msa0408600:five_prime_UTR
GTGGAAAGCCTTTCTCCAGA+GGG 0.645090 3_2:-48521439 Msa0408600:CDS
GCTGAATCCAGAAAGAAAGC+CGG 0.646951 3_2:-48521838 Msa0408600:intron
GATATAAATGAATGGCAGTG+TGG 0.647971 3_2:-48522868 Msa0408600:CDS
AAAAGGAAAATCAAATGCTG+AGG 0.649523 3_2:-48519996 Msa0408600:CDS
TGACAGTTGGAGGAGGAAAG+CGG 0.652984 3_2:-48519808 Msa0408600:three_prime_UTR
ACATTTCTCACGTCCCAATG+TGG 0.654046 3_2:-48519690 Msa0408600:three_prime_UTR
ATACTTACATCATCAATGTG+TGG 0.660709 3_2:+48524072 None:intergenic
TGTGATGTAAACATACAGGT+AGG 0.665672 3_2:+48514324 None:intergenic
ACGCATGACTGAATCCATGT+TGG 0.677905 3_2:-48514472 Msa0408600:three_prime_UTR
GTGCATGATATCGCTAACAA+GGG 0.700299 3_2:-48514429 Msa0408600:three_prime_UTR
ATTCTGGATCAGGAGCAGAG+TGG 0.757422 3_2:-48523190 Msa0408600:CDS
AGAATGGAACCACGACACAG+TGG 0.758383 3_2:+48524298 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTGGAAATATTAATA+TGG - chr3_2:48516017-48516036 Msa0408600:intron 10.0%
!!! ATAATAATTTTAGAAAATAG+AGG + chr3_2:48516176-48516195 None:intergenic 10.0%
!!! CTATTTTCTAAAATTATTAT+TGG - chr3_2:48516176-48516195 Msa0408600:intron 10.0%
!!! AAAATTCTTTTAAAATTTCT+AGG + chr3_2:48516608-48516627 None:intergenic 10.0%
!!! GAAATTTTAAAAGAATTTTA+AGG - chr3_2:48516609-48516628 Msa0408600:intron 10.0%
!!! AGAAATTAGAATATAATTTT+AGG + chr3_2:48516962-48516981 None:intergenic 10.0%
!! AAAAAAAAAAAAAAGATTTC+TGG + chr3_2:48517507-48517526 Msa0408610:intron 10.0%
!! AGAAAAAATAAAATTACAAA+AGG - chr3_2:48517591-48517610 Msa0408600:intron 10.0%
!! GAAAAAATAAAATTACAAAA+GGG - chr3_2:48517592-48517611 Msa0408600:intron 10.0%
!! AAAAAATAAAATTACAAAAG+GGG - chr3_2:48517593-48517612 Msa0408600:intron 10.0%
!! TTTAATAATAACTATTGTAA+CGG - chr3_2:48518568-48518587 Msa0408600:intron 10.0%
!!! AAAGAAAAAATGATTTTTTT+TGG - chr3_2:48520698-48520717 Msa0408600:intron 10.0%
!!! ATTCAAAAAAAATATTTTAC+AGG - chr3_2:48521997-48522016 Msa0408600:intron 10.0%
!!! CAAAATTGATTTTTTTAATA+GGG + chr3_2:48522071-48522090 None:intergenic 10.0%
!!! TCAAAATTGATTTTTTTAAT+AGG + chr3_2:48522072-48522091 None:intergenic 10.0%
!! CAAAATACATTAATTTAATA+GGG + chr3_2:48522318-48522337 None:intergenic 10.0%
!! ATATTAAAAAAGAAAAAAAC+TGG - chr3_2:48522831-48522850 Msa0408600:CDS 10.0%
!!! TCTCATAAAATATATTTTAA+CGG - chr3_2:48523020-48523039 Msa0408600:intron 10.0%
!!! GTATTAATTGATTTTAATTT+TGG - chr3_2:48523821-48523840 Msa0408600:intron 10.0%
!!! TTTCAATCTTTTTTTGTTTT+TGG - chr3_2:48514409-48514428 Msa0408600:three_prime_UTR 15.0%
!!! AAAATATTTTTACCTTTTCT+TGG - chr3_2:48515346-48515365 Msa0408600:intron 15.0%
!! AAAAATATAATATCTCAAGA+AGG - chr3_2:48515675-48515694 Msa0408600:intron 15.0%
!!! TAAAATTGTATTGATTCTAT+TGG + chr3_2:48515879-48515898 None:intergenic 15.0%
!!! ATTAATATGGTTATTTTATG+AGG - chr3_2:48516030-48516049 Msa0408600:intron 15.0%
!! TAAATATCATTGTTTAAACT+AGG - chr3_2:48516514-48516533 Msa0408600:intron 15.0%
!! CAATAGTTATTATTAAAGTA+TGG + chr3_2:48518565-48518584 Msa0408610:intron 15.0%
!! AAAAGATTAACTAATCAATT+TGG + chr3_2:48519183-48519202 None:intergenic 15.0%
!!! CTTGTATTATATTCATTTTT+TGG - chr3_2:48520069-48520088 Msa0408600:intron 15.0%
!! ACATAAATCATATATTACAT+TGG + chr3_2:48520376-48520395 None:intergenic 15.0%
!!! ATTTTAGTTCATGTAATAAA+GGG + chr3_2:48520408-48520427 None:intergenic 15.0%
!!! TTCATGTAATATATTTTGTT+TGG + chr3_2:48520586-48520605 None:intergenic 15.0%
!!! ACTTTAGAAATGAAAAATAT+AGG - chr3_2:48520837-48520856 Msa0408600:intron 15.0%
!!! ATTAACCCATTTTTAATATA+AGG + chr3_2:48521685-48521704 None:intergenic 15.0%
!!! ATGCAAAAAAAATATTTTAC+AGG + chr3_2:48521750-48521769 None:intergenic 15.0%
!!! AAAATTTGCTCAAATTAATA+GGG - chr3_2:48521856-48521875 Msa0408600:intron 15.0%
!! GCAAAATACATTAATTTAAT+AGG + chr3_2:48522319-48522338 None:intergenic 15.0%
!!! TGTCATATTCTATTATTTTA+AGG - chr3_2:48522390-48522409 Msa0408600:intron 15.0%
!! TAAATATAGTATAAGTATCT+AGG + chr3_2:48522595-48522614 None:intergenic 15.0%
!! TTGAGTAGAAAAAATAAATA+TGG + chr3_2:48522921-48522940 None:intergenic 15.0%
!!! ATATTTTGATTTGACAAAAT+AGG - chr3_2:48522997-48523016 Msa0408600:intron 15.0%
!!! TTCTTATTTTCTTTTTTGTA+TGG + chr3_2:48523479-48523498 None:intergenic 15.0%
!! GAATCTTAATTTATTAAACT+GGG + chr3_2:48523519-48523538 None:intergenic 15.0%
!! TGAATCTTAATTTATTAAAC+TGG + chr3_2:48523520-48523539 None:intergenic 15.0%
!!! ATCTTTTTTTGTTTTTGGTT+CGG - chr3_2:48514414-48514433 Msa0408600:three_prime_UTR 20.0%
!!! AAGAACAATGAATAAGATTT+TGG - chr3_2:48514478-48514497 Msa0408600:three_prime_UTR 20.0%
!!! AAATTTGCTGAATTTAATCA+TGG - chr3_2:48514667-48514686 Msa0408600:intron 20.0%
!!! AATTTGCTGAATTTAATCAT+GGG - chr3_2:48514668-48514687 Msa0408600:intron 20.0%
!!! ATTTTTCTACTTGAGAAAAA+TGG - chr3_2:48514784-48514803 Msa0408600:intron 20.0%
!!! TTTTTCTACTTGAGAAAAAT+GGG - chr3_2:48514785-48514804 Msa0408600:intron 20.0%
!! ACATATAACAATTGAAACAA+AGG + chr3_2:48514819-48514838 None:intergenic 20.0%
!!! TTATATGTAGATGTTTTCTT+TGG - chr3_2:48514831-48514850 Msa0408600:intron 20.0%
!! AGAAACGATAAATAACTTAT+TGG - chr3_2:48515141-48515160 Msa0408600:intron 20.0%
!! TCAATTTCTTTACTTATTAG+TGG + chr3_2:48515247-48515266 None:intergenic 20.0%
!! CTCATATAGATATAAATGAA+TGG - chr3_2:48515750-48515769 Msa0408600:intron 20.0%
!! TCATACCAAATTAAGTAAAT+TGG + chr3_2:48515846-48515865 None:intergenic 20.0%
!! ATTAACTATATCATGAATGA+TGG + chr3_2:48515988-48516007 None:intergenic 20.0%
!!! TTAAAATTTCTAGGTCAATA+GGG + chr3_2:48516599-48516618 None:intergenic 20.0%
!!! TTTAAAATTTCTAGGTCAAT+AGG + chr3_2:48516600-48516619 None:intergenic 20.0%
!! TTGCAGAATTTGTATATTTA+TGG - chr3_2:48517079-48517098 Msa0408600:intron 20.0%
!! TATTAAATGATGTCAAATAG+TGG - chr3_2:48517340-48517359 Msa0408600:intron 20.0%
!!! TTTCCAGAAATCTTTATTTT+TGG - chr3_2:48517839-48517858 Msa0408600:intron 20.0%
!!! ACTGTTTTTATAAGCTATAT+TGG + chr3_2:48518104-48518123 Msa0408610:intron 20.0%
!! TCTACATGTATTTATATCAA+AGG - chr3_2:48518510-48518529 Msa0408600:intron 20.0%
!! GAAAAAACTAATATCTAAAC+AGG + chr3_2:48518916-48518935 Msa0408610:CDS 20.0%
!! TCAATTTGGTAAACAAATTT+AGG + chr3_2:48519169-48519188 None:intergenic 20.0%
!! TATCGAATTTGAGAAAATTA+AGG + chr3_2:48519572-48519591 None:intergenic 20.0%
!!! TTAGTTCTTATATCTTGATA+TGG - chr3_2:48520094-48520113 Msa0408600:intron 20.0%
!! AGACTAAATATGAAAATTAC+TGG + chr3_2:48520122-48520141 None:intergenic 20.0%
!!! TTTTAGTTCATGTAATAAAG+GGG + chr3_2:48520407-48520426 None:intergenic 20.0%
!!! CATTTTAGTTCATGTAATAA+AGG + chr3_2:48520409-48520428 None:intergenic 20.0%
!! AGGTTTCTAACAAATTAATA+AGG - chr3_2:48520447-48520466 Msa0408600:intron 20.0%
!!! TAGAGATATCACAATATTTT+GGG + chr3_2:48520791-48520810 None:intergenic 20.0%
!!! TTGTTGTTTGCAAATAAATA+GGG - chr3_2:48521045-48521064 Msa0408600:intron 20.0%
!!! ACTTTTTGTATTCTTCTTAA+CGG + chr3_2:48521204-48521223 None:intergenic 20.0%
!!! AAGAATACAAAAAGTATAAG+TGG - chr3_2:48521209-48521228 Msa0408600:intron 20.0%
!!! TATTTTTCATATGGTCTTTA+AGG + chr3_2:48521240-48521259 None:intergenic 20.0%
!!! TCATGAAAGATTTTATTGTA+AGG + chr3_2:48521372-48521391 None:intergenic 20.0%
!! TACAATAAAATCTTTCATGA+AGG - chr3_2:48521372-48521391 Msa0408600:intron 20.0%
!! TTCATCAAAATGAATGTTTA+TGG + chr3_2:48521454-48521473 None:intergenic 20.0%
!!! ATTTTGATGAACAAAAAGTA+TGG - chr3_2:48521463-48521482 Msa0408600:CDS 20.0%
!!! TTTTGATGAACAAAAAGTAT+GGG - chr3_2:48521464-48521483 Msa0408600:CDS 20.0%
!! TACCAACCTTATATTAAAAA+TGG - chr3_2:48521676-48521695 Msa0408600:intron 20.0%
!! ACCAACCTTATATTAAAAAT+GGG - chr3_2:48521677-48521696 Msa0408600:intron 20.0%
!!! CAAAAAAAATATTTTACAGG+TGG + chr3_2:48522000-48522019 None:intergenic 20.0%
!!! AATTTGAAGATTTTTGGTTT+TGG - chr3_2:48521781-48521800 Msa0408600:CDS 20.0%
!!! CTATTAATTTGAGCAAATTT+TGG + chr3_2:48521857-48521876 None:intergenic 20.0%
!!! CAAAATTTGCTCAAATTAAT+AGG - chr3_2:48521855-48521874 Msa0408600:intron 20.0%
!!! AAATTTGCTCAAATTAATAG+GGG - chr3_2:48521857-48521876 Msa0408600:intron 20.0%
!! TTTGTAATTTGAGCAAATTT+CGG + chr3_2:48521888-48521907 None:intergenic 20.0%
!!! AAATTTGCTCAAATTACAAA+GGG - chr3_2:48521888-48521907 Msa0408600:intron 20.0%
!!! ATTTGAAGATTTTTTGGTTT+TGG + chr3_2:48521965-48521984 None:intergenic 20.0%
!!! CTTGTAATATAAGTCATTTT+CGG + chr3_2:48522030-48522049 None:intergenic 20.0%
!! GAAAATGACTTATATTACAA+GGG - chr3_2:48522029-48522048 Msa0408600:intron 20.0%
!! AAAATGACTTATATTACAAG+GGG - chr3_2:48522030-48522049 Msa0408600:intron 20.0%
!! AAATGTCATGTTTAATTCAT+GGG + chr3_2:48522134-48522153 None:intergenic 20.0%
!!! ATACTATTTTCAAGTTGTAT+TGG + chr3_2:48522209-48522228 None:intergenic 20.0%
!! AACAACAATGATTAATTCTT+GGG - chr3_2:48522463-48522482 Msa0408600:intron 20.0%
!! TGTACAAATATAAGAAAGAA+AGG + chr3_2:48522745-48522764 None:intergenic 20.0%
!!! TAATTGAGTCAACAATTTTT+TGG + chr3_2:48522806-48522825 None:intergenic 20.0%
!!! ATTGGTATGACTTTTTTTTA+TGG + chr3_2:48523097-48523116 None:intergenic 20.0%
!!! TCTAAAGCATAATTGTTATT+TGG - chr3_2:48523692-48523711 Msa0408600:intron 20.0%
!! ATTTCAAAATGATAAAGTTC+TGG - chr3_2:48523902-48523921 Msa0408600:intron 20.0%
!!! TTATAGCTTTACAAAATTCA+CGG + chr3_2:48524048-48524067 None:intergenic 20.0%
!! TCAACTTAGTAAACAAATTT+AGG + chr3_2:48524251-48524270 None:intergenic 20.0%
!!! CAATGAATAAGATTTTGGTT+TGG - chr3_2:48514483-48514502 Msa0408600:intron 25.0%
!!! GTAAATACCCATTTTTCTTT+AGG - chr3_2:48514640-48514659 Msa0408600:intron 25.0%
! TTTCTCACCTAAAGAAAAAT+GGG + chr3_2:48514650-48514669 None:intergenic 25.0%
! ATTTCTCACCTAAAGAAAAA+TGG + chr3_2:48514651-48514670 None:intergenic 25.0%
!!! TGTTTTGATTTGCATGAAAT+AGG - chr3_2:48514692-48514711 Msa0408600:intron 25.0%
! AAATAGGAGTTGAATTGAAT+TGG - chr3_2:48514708-48514727 Msa0408600:intron 25.0%
!!! ATGATCTGAATGTTTTTCAA+TGG - chr3_2:48514864-48514883 Msa0408600:intron 25.0%
! AGGAGAAAAATGCAAAAATT+TGG + chr3_2:48514933-48514952 None:intergenic 25.0%
! TGTAACAAAGAAACAATCAA+AGG + chr3_2:48514980-48514999 None:intergenic 25.0%
!! TTTGATTGTTTCTTTGTTAC+AGG - chr3_2:48514979-48514998 Msa0408600:intron 25.0%
!! TTGATTGTTTCTTTGTTACA+GGG - chr3_2:48514980-48514999 Msa0408600:intron 25.0%
!!! ATGTCTGATTCAAAGTATTT+TGG - chr3_2:48515041-48515060 Msa0408600:intron 25.0%
!! GACTTTAGTTTCATAGTAAA+AGG + chr3_2:48515193-48515212 None:intergenic 25.0%
! AATGTTATTGTTCAGAATTC+TGG - chr3_2:48515420-48515439 Msa0408600:intron 25.0%
! TGATCAACTTACATCAATAT+TGG - chr3_2:48515581-48515600 Msa0408600:intron 25.0%
! CTCTATATATATCATTGTCA+GGG + chr3_2:48515712-48515731 None:intergenic 25.0%
! TCTCTATATATATCATTGTC+AGG + chr3_2:48515713-48515732 None:intergenic 25.0%
! CAATGATATATATAGAGATC+AGG - chr3_2:48515715-48515734 Msa0408600:intron 25.0%
! ACACTCCAATTTACTTAATT+TGG - chr3_2:48515838-48515857 Msa0408600:intron 25.0%
! ACTAGTTATTTGATCAACAA+TGG + chr3_2:48515911-48515930 None:intergenic 25.0%
! TTGTTGATCAAATAACTAGT+TGG - chr3_2:48515911-48515930 Msa0408600:intron 25.0%
!!! AATCCAAACTGGTTTTTTTT+CGG + chr3_2:48515945-48515964 None:intergenic 25.0%
!! TTGGATTAGATTGAAGTAAT+CGG - chr3_2:48515958-48515977 Msa0408600:intron 25.0%
! ATGTTCTTAAATATTAGGCT+TGG + chr3_2:48516338-48516357 None:intergenic 25.0%
! CAAGCATGTTCTTAAATATT+AGG + chr3_2:48516343-48516362 None:intergenic 25.0%
! TTTAAGGGAAGTAAAATTTC+AGG + chr3_2:48516455-48516474 None:intergenic 25.0%
!! TTAAACTAGGCTAAGTTTTA+AGG - chr3_2:48516527-48516546 Msa0408600:intron 25.0%
!! TAAAATTTCTAGGTCAATAG+GGG + chr3_2:48516598-48516617 None:intergenic 25.0%
!! GTTAAACCTTCTGAAAATTT+CGG - chr3_2:48516706-48516725 Msa0408600:intron 25.0%
! AAGAAATAAGCATATATGTG+AGG - chr3_2:48516900-48516919 Msa0408600:intron 25.0%
! AGAATTCTGTCAAATTGTTA+AGG + chr3_2:48517128-48517147 Msa0408610:intron 25.0%
! TTGTTAAATAGATGCTATAG+TGG - chr3_2:48517260-48517279 Msa0408600:intron 25.0%
! TTGAACAAATCACTATTGTT+CGG - chr3_2:48517302-48517321 Msa0408600:intron 25.0%
! AAAATTACAAAAGGGGAAAT+CGG - chr3_2:48517600-48517619 Msa0408600:intron 25.0%
!!! TTTATGGGTGGTTTTTTAAA+GGG + chr3_2:48517656-48517675 Msa0408610:CDS 25.0%
! TCACCAAAAATAAAGATTTC+TGG + chr3_2:48517845-48517864 Msa0408610:intron 25.0%
!!! GAAATCTTTATTTTTGGTGA+AGG - chr3_2:48517845-48517864 Msa0408600:intron 25.0%
! TTGTGTAGATAATACTATGA+TGG - chr3_2:48517901-48517920 Msa0408600:intron 25.0%
! AGGATAAACTTGTAAAACAA+TGG - chr3_2:48517950-48517969 Msa0408600:intron 25.0%
! TGTAAAACAATGGACATATT+TGG - chr3_2:48517960-48517979 Msa0408600:intron 25.0%
! TTGGAGAACTTAATGAAAAT+AGG + chr3_2:48518085-48518104 Msa0408610:intron 25.0%
!!! ATCCGTTGATAATTGATATT+GGG + chr3_2:48518263-48518282 Msa0408610:intron 25.0%
!!! AATCCGTTGATAATTGATAT+TGG + chr3_2:48518264-48518283 Msa0408610:intron 25.0%
!!! GGAATTAAAAAAGTTTGTTG+TGG + chr3_2:48518292-48518311 Msa0408610:intron 25.0%
! TGAAATCAAGAGTCATTAAT+TGG - chr3_2:48518403-48518422 Msa0408600:intron 25.0%
!!! TTTTCACTTTTGTATTTCAG+AGG - chr3_2:48518602-48518621 Msa0408600:intron 25.0%
!!! GATTATGATGGCTTTTTTTT+CGG + chr3_2:48518673-48518692 Msa0408610:intron 25.0%
! GAATGATCTAATGATTATGA+TGG + chr3_2:48518685-48518704 Msa0408610:intron 25.0%
!! TTATAGCTTTACAAAATCCA+CGG + chr3_2:48518967-48518986 Msa0408610:CDS 25.0%
! TTCAAAACTTACTTCATTGA+AGG + chr3_2:48519250-48519269 None:intergenic 25.0%
! TTACATATTGAAGATATGTC+AGG + chr3_2:48519444-48519463 None:intergenic 25.0%
! TATGAACAAGAAAGATGTTA+AGG + chr3_2:48519755-48519774 None:intergenic 25.0%
! AATGGTTTCTCATTGAATAT+CGG - chr3_2:48520285-48520304 Msa0408600:intron 25.0%
!!! CTTATTTTTGTTTATGTCCT+TGG + chr3_2:48520543-48520562 None:intergenic 25.0%
! CAAGGACATAAACAAAAATA+AGG - chr3_2:48520541-48520560 Msa0408600:intron 25.0%
! ACATAAACAAAAATAAGGCA+TGG - chr3_2:48520546-48520565 Msa0408600:intron 25.0%
! TAACTTCCTATTGTGTAATA+TGG + chr3_2:48520664-48520683 None:intergenic 25.0%
!! GTAGAGATATCACAATATTT+TGG + chr3_2:48520792-48520811 None:intergenic 25.0%
! ATAATTCCTTAATTTCCTCT+AGG - chr3_2:48520912-48520931 Msa0408600:intron 25.0%
! CTATTTATTTGCAAACAACA+AGG + chr3_2:48521046-48521065 None:intergenic 25.0%
!!! CTTGTTGTTTGCAAATAAAT+AGG - chr3_2:48521044-48521063 Msa0408600:intron 25.0%
! ATGAACAAGATGAATTTCAT+TGG - chr3_2:48521304-48521323 Msa0408600:intron 25.0%
! TGAACAAGATGAATTTCATT+GGG - chr3_2:48521305-48521324 Msa0408600:intron 25.0%
!!! TTTTTAGCATCATACTGATA+TGG + chr3_2:48521580-48521599 None:intergenic 25.0%
!!! ACCCATTTTTAATATAAGGT+TGG + chr3_2:48521681-48521700 None:intergenic 25.0%
! CCAAAAATCTTCAAATTACA+AGG + chr3_2:48521778-48521797 None:intergenic 25.0%
!! CCTTGTAATTTGAAGATTTT+TGG - chr3_2:48521775-48521794 Msa0408600:CDS 25.0%
!! AATTTGCTCAAATTAATAGG+GGG - chr3_2:48521858-48521877 Msa0408600:intron 25.0%
!! GAAATTTGCTCAAATTACAA+AGG - chr3_2:48521887-48521906 Msa0408600:intron 25.0%
!! AATTTGCTCAAATTACAAAG+GGG - chr3_2:48521889-48521908 Msa0408600:intron 25.0%
!! CTAAATTTGCTCAAATTACA+GGG - chr3_2:48521918-48521937 Msa0408600:intron 25.0%
!! TAAATTTGCTCAAATTACAG+GGG - chr3_2:48521919-48521938 Msa0408600:intron 25.0%
!!! CTTGTGATTTGAAGATTTTT+TGG + chr3_2:48521971-48521990 None:intergenic 25.0%
! CAAAAAATCTTCAAATCACA+AGG - chr3_2:48521969-48521988 Msa0408600:intron 25.0%
! CGAAAATGACTTATATTACA+AGG - chr3_2:48522028-48522047 Msa0408600:intron 25.0%
! AAATGACTTATATTACAAGG+GGG - chr3_2:48522031-48522050 Msa0408600:intron 25.0%
! CAAATGTCATGTTTAATTCA+TGG + chr3_2:48522135-48522154 None:intergenic 25.0%
! CATGAATTAAACATGACATT+TGG - chr3_2:48522133-48522152 Msa0408600:intron 25.0%
! GTTTCTCATTTAATTCAAAG+AGG + chr3_2:48522440-48522459 None:intergenic 25.0%
! CAACAACAATGATTAATTCT+TGG - chr3_2:48522462-48522481 Msa0408600:intron 25.0%
! CACTAGTTAAGGAAAAAAAA+AGG - chr3_2:48522511-48522530 Msa0408600:intron 25.0%
!! AAAAGAAAAAAACTGGTTCA+AGG - chr3_2:48522838-48522857 Msa0408600:CDS 25.0%
! ATGGTTATATATTCTAGTGA+TGG + chr3_2:48522902-48522921 None:intergenic 25.0%
!! GATTTTTCTCTTGAAAAGAT+AGG - chr3_2:48522953-48522972 Msa0408600:CDS 25.0%
!!! TATTTTAACGGAAATTTGTG+TGG - chr3_2:48523032-48523051 Msa0408600:intron 25.0%
!! AAAACTAGCTCTCAATATAT+TGG + chr3_2:48523115-48523134 None:intergenic 25.0%
!!! AATATATTGAGAGCTAGTTT+TGG - chr3_2:48523114-48523133 Msa0408600:intron 25.0%
! CATTGCAAGATGAATTAATT+TGG - chr3_2:48523199-48523218 Msa0408600:intron 25.0%
! AGCAATAATTGTTTGGTATT+TGG + chr3_2:48523353-48523372 None:intergenic 25.0%
! AAATACCAAACAATTATTGC+TGG - chr3_2:48523352-48523371 Msa0408600:intron 25.0%
! ATTAGACATGATTTCCAAAT+TGG + chr3_2:48523937-48523956 None:intergenic 25.0%
!! ATTATTTGCTAACTGTATGT+TGG - chr3_2:48523955-48523974 Msa0408600:intron 25.0%
!!! TTTTGTTTTTGGTTCGGAAA+TGG - chr3_2:48514420-48514439 Msa0408600:three_prime_UTR 30.0%
ATACTTACATCATCAATGTG+TGG + chr3_2:48514557-48514576 None:intergenic 30.0%
! TTTTTACAGTCGCGAAAATT+AGG + chr3_2:48514953-48514972 None:intergenic 30.0%
! GTTTCTCCATTGATGATAAT+AGG + chr3_2:48515127-48515146 None:intergenic 30.0%
GTAATTGAATGTAGCTACAT+AGG - chr3_2:48515269-48515288 Msa0408600:intron 30.0%
CAAGCATATAAACCAAGAAA+AGG + chr3_2:48515361-48515380 None:intergenic 30.0%
!! CATTTGAGTCGTTTTATTGT+TGG + chr3_2:48515537-48515556 None:intergenic 30.0%
TTGATCAAATAACTAGTTGG+TGG - chr3_2:48515914-48515933 Msa0408600:intron 30.0%
AAACCGAAAAAAAACCAGTT+TGG - chr3_2:48515939-48515958 Msa0408600:intron 30.0%
TACTTCAATCTAATCCAAAC+TGG + chr3_2:48515956-48515975 None:intergenic 30.0%
ATTAGATTGAAGTAATCGGA+TGG - chr3_2:48515962-48515981 Msa0408600:intron 30.0%
!! TGGTTATTTTATGAGGAACT+TGG - chr3_2:48516037-48516056 Msa0408600:intron 30.0%
TTAATTACAAGTGTCAGTGT+CGG + chr3_2:48516144-48516163 None:intergenic 30.0%
! ATTGTTTTCATGTTTTGTCC+AGG + chr3_2:48516374-48516393 None:intergenic 30.0%
! TACTAACTCACAACTTGTTT+CGG + chr3_2:48516401-48516420 None:intergenic 30.0%
GGAAGTAAAATTTCAGGATT+TGG + chr3_2:48516449-48516468 None:intergenic 30.0%
GATGATGCTAAATATGAAAG+TGG + chr3_2:48516484-48516503 None:intergenic 30.0%
AAACTACAGCAATCAAACAA+AGG + chr3_2:48516568-48516587 None:intergenic 30.0%
!! TTTTAAGGATAAACACCTGT+TGG - chr3_2:48516624-48516643 Msa0408600:intron 30.0%
TGTGACCATGAAATTAATTC+TGG - chr3_2:48516841-48516860 Msa0408600:intron 30.0%
GTGACCATGAAATTAATTCT+GGG - chr3_2:48516842-48516861 Msa0408600:intron 30.0%
TTGACCCAGAATTAATTTCA+TGG + chr3_2:48516849-48516868 None:intergenic 30.0%
ATATTGAAATACCATGAAGC+CGG + chr3_2:48517046-48517065 None:intergenic 30.0%
ACAAGATAACATGTAGAGTT+TGG + chr3_2:48517474-48517493 Msa0408610:intron 30.0%
!!! TTATGGGTGGTTTTTTAAAG+GGG + chr3_2:48517655-48517674 Msa0408610:CDS 30.0%
!!! GTTTATGGGTGGTTTTTTAA+AGG + chr3_2:48517657-48517676 Msa0408610:CDS 30.0%
TTGGGTATGATACTGTTTAT+GGG + chr3_2:48517671-48517690 Msa0408610:CDS 30.0%
TTTGGGTATGATACTGTTTA+TGG + chr3_2:48517672-48517691 Msa0408610:CDS 30.0%
TAAACAGTATCATACCCAAA+AGG - chr3_2:48517672-48517691 Msa0408600:intron 30.0%
! GTTTTACAAGTTTATCCTTC+AGG + chr3_2:48517948-48517967 Msa0408610:intron 30.0%
ATAAGTTTCCTGAGACTATT+TGG - chr3_2:48518011-48518030 Msa0408600:intron 30.0%
TAAGTTTCCTGAGACTATTT+GGG - chr3_2:48518012-48518031 Msa0408600:intron 30.0%
AATAAGTTGTTTATCCACAC+AGG - chr3_2:48518237-48518256 Msa0408600:intron 30.0%
TCGATAGGATGTTATACTTA+GGG - chr3_2:48518322-48518341 Msa0408600:intron 30.0%
CAACAACATCACAAGAAAAA+TGG + chr3_2:48518477-48518496 Msa0408610:intron 30.0%
! CATTTTTCTTGTGATGTTGT+TGG - chr3_2:48518475-48518494 Msa0408600:intron 30.0%
AAGTATGGTTATTACAGAGA+AGG + chr3_2:48518550-48518569 Msa0408610:intron 30.0%
TACAAAAGTGAAAACCTTGT+TGG + chr3_2:48518596-48518615 Msa0408610:intron 30.0%
GTATTTCAGAGGATTGAAAA+AGG - chr3_2:48518613-48518632 Msa0408600:intron 30.0%
AAAAGGAAAATCAAATGCTG+AGG - chr3_2:48518630-48518649 Msa0408600:intron 30.0%
!! CTGTTACTTTCTGAAAAAAC+AGG + chr3_2:48518725-48518744 Msa0408610:CDS 30.0%
! TAGCAGAAAAAAGTGTAAAC+TGG + chr3_2:48518790-48518809 Msa0408610:CDS 30.0%
!!! GATAGACATGATTTTCAAGT+TGG + chr3_2:48518852-48518871 Msa0408610:CDS 30.0%
CACCAAGTATACAATGAATT+CGG + chr3_2:48518893-48518912 Msa0408610:CDS 30.0%
ATTTAGGAGATACACCATAA+AGG + chr3_2:48519153-48519172 None:intergenic 30.0%
TAACCTCTATACTAAAGCAT+CGG + chr3_2:48519469-48519488 None:intergenic 30.0%
AAAACCAGTGCAAAAGTAAT+TGG + chr3_2:48519505-48519524 None:intergenic 30.0%
ATTTGAGAAAATTAAGGCAC+AGG + chr3_2:48519566-48519585 None:intergenic 30.0%
ACAAGAAAGATGTTAAGGTA+TGG + chr3_2:48519750-48519769 None:intergenic 30.0%
AAAATTAGATTCAACATGCC+TGG + chr3_2:48519778-48519797 None:intergenic 30.0%
CAATAAGGGAAAAATTCCAT+GGG + chr3_2:48519827-48519846 None:intergenic 30.0%
ACAATAAGGGAAAAATTCCA+TGG + chr3_2:48519828-48519847 None:intergenic 30.0%
GAATATGGTGAACACAATAA+GGG + chr3_2:48519841-48519860 None:intergenic 30.0%
! ACAACACTCAACTTTTGTAA+GGG - chr3_2:48520229-48520248 Msa0408600:intron 30.0%
TGTATGACATGAAAACACAA+TGG - chr3_2:48520267-48520286 Msa0408600:intron 30.0%
! AATGAAAAAAGTGCATTCCA+AGG - chr3_2:48520523-48520542 Msa0408600:intron 30.0%
TAGAGACCATATTACACAAT+AGG - chr3_2:48520655-48520674 Msa0408600:intron 30.0%
ATTACACAATAGGAAGTTAC+AGG - chr3_2:48520665-48520684 Msa0408600:intron 30.0%
TTACACAATAGGAAGTTACA+GGG - chr3_2:48520666-48520685 Msa0408600:intron 30.0%
!!! ATCACAATATTTTGGGATTG+AGG + chr3_2:48520784-48520803 None:intergenic 30.0%
ATAGGTAAGCCTTAAATGAA+CGG - chr3_2:48520855-48520874 Msa0408600:intron 30.0%
AATTATTCCCCGTTCATTTA+AGG + chr3_2:48520867-48520886 None:intergenic 30.0%
! ATCTTCTTTGAAAAAGAGAC+TGG + chr3_2:48521173-48521192 None:intergenic 30.0%
AGACCATATGAAAAATAGTG+AGG - chr3_2:48521243-48521262 Msa0408600:intron 30.0%
GACCATATGAAAAATAGTGA+GGG - chr3_2:48521244-48521263 Msa0408600:intron 30.0%
ACCATATGAAAAATAGTGAG+GGG - chr3_2:48521245-48521264 Msa0408600:intron 30.0%
ATTCATCTTGTTCATGACTT+GGG + chr3_2:48521299-48521318 None:intergenic 30.0%
AATTCATCTTGTTCATGACT+TGG + chr3_2:48521300-48521319 None:intergenic 30.0%
AAGATGAATTTCATTGGGAA+GGG - chr3_2:48521310-48521329 Msa0408600:intron 30.0%
CTCTATATTTGTAGAAGCTT+GGG + chr3_2:48521336-48521355 None:intergenic 30.0%
ACTCTATATTTGTAGAAGCT+TGG + chr3_2:48521337-48521356 None:intergenic 30.0%
AATACCTATTGAATAACCAC+TGG - chr3_2:48521414-48521433 Msa0408600:intron 30.0%
TAGGGATATTCATAGTTTGA+GGG + chr3_2:48521523-48521542 None:intergenic 30.0%
TTAGGGATATTCATAGTTTG+AGG + chr3_2:48521524-48521543 None:intergenic 30.0%
CAAGGTTATTAATCAGGTTA+GGG + chr3_2:48521541-48521560 None:intergenic 30.0%
!! AGGTTGGTAATAATACAACT+TGG + chr3_2:48521665-48521684 None:intergenic 30.0%
TGTACAGTCAAAATTCATGA+AGG + chr3_2:48521808-48521827 None:intergenic 30.0%
ACTGTACAAAATCGAAGATA+TGG - chr3_2:48521820-48521839 Msa0408600:CDS 30.0%
ATTTGCTCAAATTACAAAGG+GGG - chr3_2:48521890-48521909 Msa0408600:intron 30.0%
CCTGTAATTTGAGCAAATTT+AGG + chr3_2:48521920-48521939 None:intergenic 30.0%
! CCTAAATTTGCTCAAATTAC+AGG - chr3_2:48521917-48521936 Msa0408600:intron 30.0%
AAATCTTCAAATCACAAGGA+TGG - chr3_2:48521973-48521992 Msa0408600:intron 30.0%
!!! CTATTTTCAAGTTGTATTGG+TGG + chr3_2:48522206-48522225 None:intergenic 30.0%
! TTTAGTTTCCTTAACTATCC+TGG - chr3_2:48522611-48522630 Msa0408600:intron 30.0%
AAAATGTTAACTAGTGTTCC+AGG + chr3_2:48522632-48522651 None:intergenic 30.0%
ATCGAGCTATCAAAGAATTA+AGG + chr3_2:48522655-48522674 None:intergenic 30.0%
! TTAATTCTTTGATAGCTCGA+TGG - chr3_2:48522654-48522673 Msa0408600:intron 30.0%
ATTGACCAGCAATAATTGTT+TGG + chr3_2:48523360-48523379 None:intergenic 30.0%
TTATGGATGTGTTAATCGAT+TGG + chr3_2:48523445-48523464 None:intergenic 30.0%
GTATGGTTATCACATGTTTA+TGG + chr3_2:48523462-48523481 None:intergenic 30.0%
GTAATTCAACGTCTAGATTT+GGG + chr3_2:48523575-48523594 None:intergenic 30.0%
CGTTGAATTACCTAATTCAA+TGG - chr3_2:48523584-48523603 Msa0408600:intron 30.0%
!! GAAAATTGACCTTTTAGAAG+TGG + chr3_2:48523636-48523655 None:intergenic 30.0%
AATGAACTTGTGACTATTGA+CGG + chr3_2:48523660-48523679 None:intergenic 30.0%
!! TGATAAAGTTCTGGAGTAAT+TGG - chr3_2:48523911-48523930 Msa0408600:intron 30.0%
ACAAAATCTAAGCATGTGTT+TGG + chr3_2:48524120-48524139 None:intergenic 30.0%
! CTTAGATTTTGTGAACACAA+GGG - chr3_2:48519046-48519065 Msa0408600:intron 30.0%
ATGAAAATAGTCAACCAACA+TGG + chr3_2:48524171-48524190 None:intergenic 30.0%
GGAAATAACATGAACCTTTA+CGG - chr3_2:48524218-48524237 Msa0408600:five_prime_UTR 30.0%
ATTTAGGAAATACACCGTAA+AGG + chr3_2:48524235-48524254 None:intergenic 30.0%
AAGTTGTGATGTAAACATAC+AGG + chr3_2:48524309-48524328 None:intergenic 30.0%
AACACGTGGCAAATTCTAAT+AGG - chr3_2:48514305-48514324 Msa0408600:three_prime_UTR 35.0%
ATTGGAGTTGTGTAATGACT+TGG - chr3_2:48514726-48514745 Msa0408600:intron 35.0%
GAGTTCACTACTTAATGTCT+TGG - chr3_2:48515097-48515116 Msa0408600:intron 35.0%
GGTGATCCTATTATCATCAA+TGG - chr3_2:48515118-48515137 Msa0408600:intron 35.0%
! CTTTTCTTGCTTGTCTGAAT+TGG - chr3_2:48515383-48515402 Msa0408600:intron 35.0%
ATTGTTCAGAATTCTGGATC+AGG - chr3_2:48515426-48515445 Msa0408600:intron 35.0%
GAGAAAGAAGTAGAATAGCT+TGG - chr3_2:48515482-48515501 Msa0408600:intron 35.0%
! ATAATATCTCAAGAAGGTGC+AGG - chr3_2:48515681-48515700 Msa0408600:intron 35.0%
GATATAAATGAATGGCAGTG+TGG - chr3_2:48515758-48515777 Msa0408600:intron 35.0%
! TCTAAGCTGATAGTGTATGA+AGG - chr3_2:48516077-48516096 Msa0408600:intron 35.0%
!! TCAACAATGAAGCATTGACA+CGG + chr3_2:48516236-48516255 None:intergenic 35.0%
!! GTTGATAGTTGATAGCTGAT+AGG - chr3_2:48516251-48516270 Msa0408600:intron 35.0%
TGCTAACTATTTCCTTGAGA+AGG - chr3_2:48516280-48516299 Msa0408600:intron 35.0%
!! TGAAAGTGGTGTTGCTTTAA+GGG + chr3_2:48516470-48516489 None:intergenic 35.0%
!! ATGAAAGTGGTGTTGCTTTA+AGG + chr3_2:48516471-48516490 None:intergenic 35.0%
! AAGCTACCGAAATTTTCAGA+AGG + chr3_2:48516715-48516734 None:intergenic 35.0%
CTCTGCTCAATTTATCGTAA+TGG - chr3_2:48516736-48516755 Msa0408600:intron 35.0%
TGGAAAACAACTATCAGCTA+TGG + chr3_2:48517000-48517019 None:intergenic 35.0%
!! TAGTTGTTTTCCAGTTAACG+AGG - chr3_2:48517007-48517026 Msa0408600:intron 35.0%
!! AGTTGTTTTCCAGTTAACGA+GGG - chr3_2:48517008-48517027 Msa0408600:intron 35.0%
TTGTTCGGTAATATGCTCTT+TGG - chr3_2:48517317-48517336 Msa0408600:intron 35.0%
AACCTAATTATCTCTCCTGA+AGG - chr3_2:48517930-48517949 Msa0408600:intron 35.0%
ATCCTTCAGGAGAGATAATT+AGG + chr3_2:48517935-48517954 Msa0408610:intron 35.0%
GGCCCAATATCAATTATCAA+CGG - chr3_2:48518258-48518277 Msa0408600:intron 35.0%
ATTCCAGTGATTTAGTCGAT+AGG - chr3_2:48518307-48518326 Msa0408600:intron 35.0%
GTCGATAGGATGTTATACTT+AGG - chr3_2:48518321-48518340 Msa0408600:intron 35.0%
GGATACAATTCCTGTGAAAT+TGG - chr3_2:48518343-48518362 Msa0408600:intron 35.0%
CAACATCACAAGAAAAATGG+AGG + chr3_2:48518474-48518493 Msa0408610:intron 35.0%
GAAAGTAACAGTGTATCTGA+CGG - chr3_2:48518734-48518753 Msa0408600:intron 35.0%
AAAGTAACAGTGTATCTGAC+GGG - chr3_2:48518735-48518754 Msa0408600:intron 35.0%
!!! TGATTTTCAAGTTGGCTATG+TGG + chr3_2:48518844-48518863 Msa0408610:CDS 35.0%
AGCCGAATTCATTGTATACT+TGG - chr3_2:48518888-48518907 Msa0408600:intron 35.0%
ACAAAATCTAAGCCTGTGTT+TGG + chr3_2:48519038-48519057 Msa0408610:CDS 35.0%
TGTGATGTAAACATACAGGT+AGG + chr3_2:48519227-48519246 None:intergenic 35.0%
AAGGTGTGATGTAAACATAC+AGG + chr3_2:48519231-48519250 None:intergenic 35.0%
! TTTTGAATGTCAGCACAGTT+AGG - chr3_2:48519263-48519282 Msa0408600:intron 35.0%
!! TATGCCAATTACTTTTGCAC+TGG - chr3_2:48519498-48519517 Msa0408600:intron 35.0%
!!! TTTGCACTGGTTTTTGCTTT+CGG - chr3_2:48519511-48519530 Msa0408600:intron 35.0%
TAATCATAGAATCTCCCTTC+CGG + chr3_2:48519599-48519618 None:intergenic 35.0%
TATCTACCATAGCTATTTGC+AGG - chr3_2:48519619-48519638 Msa0408600:three_prime_UTR 35.0%
TAAGTCCAGAAGATGAAGAT+TGG + chr3_2:48519645-48519664 None:intergenic 35.0%
AAACATCAAGGTCAAGCAAA+TGG + chr3_2:48519679-48519698 None:intergenic 35.0%
ACATCTTTCTTGTTCATACC+AGG - chr3_2:48519757-48519776 Msa0408600:three_prime_UTR 35.0%
ATTCCATGGGCAATAAAAGA+AGG + chr3_2:48519814-48519833 None:intergenic 35.0%
GGAATATGGTGAACACAATA+AGG + chr3_2:48519842-48519861 None:intergenic 35.0%
TGTACAATGACAATTCACCT+TGG + chr3_2:48519873-48519892 None:intergenic 35.0%
TGAATTGTCATTGTACACCA+AGG - chr3_2:48519876-48519895 Msa0408600:three_prime_UTR 35.0%
GAATTGTCATTGTACACCAA+GGG - chr3_2:48519877-48519896 Msa0408600:three_prime_UTR 35.0%
!! AAATGATGGACACAATGGAT+AGG + chr3_2:48519915-48519934 None:intergenic 35.0%
AGTTCAGTGACACTAACAAA+TGG + chr3_2:48519999-48520018 None:intergenic 35.0%
! AGTGTCACTGAACTCAATAT+CGG - chr3_2:48520005-48520024 Msa0408600:CDS 35.0%
! TGAGTGTTGTGGCAAAATAA+TGG + chr3_2:48520219-48520238 None:intergenic 35.0%
! CTTACAAAAGTTGAGTGTTG+TGG + chr3_2:48520230-48520249 None:intergenic 35.0%
! CACAACACTCAACTTTTGTA+AGG - chr3_2:48520228-48520247 Msa0408600:intron 35.0%
CAAAAATAAGGCATGGTACA+AGG - chr3_2:48520553-48520572 Msa0408600:intron 35.0%
ATATACACCACCTGAAATTC+TGG + chr3_2:48520740-48520759 None:intergenic 35.0%
TACCAACTGAATCATGTTCA+CGG - chr3_2:48520809-48520828 Msa0408600:intron 35.0%
TAGGTAAGCCTTAAATGAAC+GGG - chr3_2:48520856-48520875 Msa0408600:intron 35.0%
TTGCTACAATGTAATGGCTA+TGG + chr3_2:48521012-48521031 None:intergenic 35.0%
AGCCATTACATTGTAGCAAA+AGG - chr3_2:48521013-48521032 Msa0408600:intron 35.0%
! CACCTTTTGCTACAATGTAA+TGG + chr3_2:48521018-48521037 None:intergenic 35.0%
ACAAAGTTGAATGCTCACAT+TGG - chr3_2:48521093-48521112 Msa0408600:intron 35.0%
!! TCCCCTCACTATTTTTCATA+TGG + chr3_2:48521249-48521268 None:intergenic 35.0%
ATGAAAAATAGTGAGGGGAT+CGG - chr3_2:48521250-48521269 Msa0408600:intron 35.0%
CAAGATGAATTTCATTGGGA+AGG - chr3_2:48521309-48521328 Msa0408600:intron 35.0%
AATGCCAGTGGTTATTCAAT+AGG + chr3_2:48521421-48521440 None:intergenic 35.0%
! TGATGAACAAAAAGTATGGG+AGG - chr3_2:48521467-48521486 Msa0408600:CDS 35.0%
TTGATTGTGATTCCGCAAAT+AGG - chr3_2:48521494-48521513 Msa0408600:intron 35.0%
CCAAGGTTATTAATCAGGTT+AGG + chr3_2:48521542-48521561 None:intergenic 35.0%
CCTAACCTGATTAATAACCT+TGG - chr3_2:48521539-48521558 Msa0408600:intron 35.0%
TTGGTCCAAGGTTATTAATC+AGG + chr3_2:48521547-48521566 None:intergenic 35.0%
CTGATATGGATCGTAATCTT+TGG + chr3_2:48521566-48521585 None:intergenic 35.0%
GCTAAAAAATGAGTGAGTTG+CGG - chr3_2:48521592-48521611 Msa0408600:intron 35.0%
GTAATAATACAACTTGGCCT+TGG + chr3_2:48521659-48521678 None:intergenic 35.0%
! GTGTTTTACCCCCTTAATAT+AGG - chr3_2:48521706-48521725 Msa0408600:intron 35.0%
GGAAATGACCTATATTAAGG+GGG + chr3_2:48521717-48521736 None:intergenic 35.0%
CGGAAATGACCTATATTAAG+GGG + chr3_2:48521718-48521737 None:intergenic 35.0%
CCGGAAATGACCTATATTAA+GGG + chr3_2:48521719-48521738 None:intergenic 35.0%
CCCTTAATATAGGTCATTTC+CGG - chr3_2:48521716-48521735 Msa0408600:intron 35.0%
ACCGGAAATGACCTATATTA+AGG + chr3_2:48521720-48521739 None:intergenic 35.0%
! TATTTTACAGGTGGCAAAAC+CGG + chr3_2:48521738-48521757 None:intergenic 35.0%
TACAAAATCGAAGATATGGC+AGG - chr3_2:48521824-48521843 Msa0408600:CDS 35.0%
ACAAAATCGAAGATATGGCA+GGG - chr3_2:48521825-48521844 Msa0408600:CDS 35.0%
!!! TTTTTGGTTTTGGACCTTCA+CGG + chr3_2:48521791-48521810 None:intergenic 35.0%
TTAACGGAAATTTGTGTGGA+AGG - chr3_2:48523036-48523055 Msa0408600:intron 35.0%
!!! ATTGAGAGCTAGTTTTGGAT+TGG - chr3_2:48523119-48523138 Msa0408600:intron 35.0%
!!! GTACGTGACATTCACTTTTT+TGG + chr3_2:48523331-48523350 None:intergenic 35.0%
TGGTAGACTCACAATATTGA+GGG + chr3_2:48523396-48523415 None:intergenic 35.0%
CTAACATTGGTATTAGCATG+TGG + chr3_2:48523416-48523435 None:intergenic 35.0%
CGATTGGTACAATCTAACAT+TGG + chr3_2:48523429-48523448 None:intergenic 35.0%
GGTAATTCAACGTCTAGATT+TGG + chr3_2:48523576-48523595 None:intergenic 35.0%
ATCTTCATGTCAACGGAAAT+TGG + chr3_2:48523610-48523629 None:intergenic 35.0%
GAAGATCTTCCACTTCTAAA+AGG - chr3_2:48523624-48523643 Msa0408600:CDS 35.0%
! GATTTGTTTCATCCTACACT+CGG + chr3_2:48523764-48523783 None:intergenic 35.0%
ATATTTGCTTGAGTAAGCTC+TGG - chr3_2:48523786-48523805 Msa0408600:intron 35.0%
! GCTTAGATTTTGTGAACACA+AGG - chr3_2:48519045-48519064 Msa0408600:intron 35.0%
TGTGATGTAAACATACAGGT+AGG + chr3_2:48519227-48519246 None:intergenic 35.0%
! TCGTGTTCTTGTTGCTTACA+AGG - chr3_2:48514519-48514538 Msa0408600:intron 40.0%
! CGTGTTCTTGTTGCTTACAA+GGG - chr3_2:48514520-48514539 Msa0408600:intron 40.0%
TTGCAGCATCTGAATCTACA+TGG + chr3_2:48515006-48515025 None:intergenic 40.0%
ATGTAGATTCAGATGCTGCA+AGG - chr3_2:48515005-48515024 Msa0408600:intron 40.0%
ACTAAAGTCGACAAACACAC+TGG - chr3_2:48515204-48515223 Msa0408600:intron 40.0%
AATGTAGCTACATAGGTCAG+TGG - chr3_2:48515276-48515295 Msa0408600:intron 40.0%
CTTGCTTGTCTGAATTGGTA+TGG - chr3_2:48515388-48515407 Msa0408600:intron 40.0%
GCAGTATTTGACGACATTTG+TGG - chr3_2:48515646-48515665 Msa0408600:intron 40.0%
! ATGCCTTCAATCTGAGGTAT+CGG + chr3_2:48516104-48516123 None:intergenic 40.0%
TAACCACAAATCACTCCAAC+AGG + chr3_2:48516642-48516661 None:intergenic 40.0%
ATGTCAAATAGTGGCTAACG+TGG - chr3_2:48517349-48517368 Msa0408600:intron 40.0%
TCAAATTCCGCTACACAACA+GGG + chr3_2:48517383-48517402 Msa0408610:intron 40.0%
TTCAAATTCCGCTACACAAC+AGG + chr3_2:48517384-48517403 Msa0408610:intron 40.0%
ATCTGTGGTTGACTACACTT+TGG - chr3_2:48517423-48517442 Msa0408600:intron 40.0%
GGTATGATACTGTTTATGGG+TGG + chr3_2:48517668-48517687 Msa0408610:CDS 40.0%
!! TGTTTATTGGTGTTGACGCA+CGG + chr3_2:48517740-48517759 Msa0408610:intron 40.0%
! GGGTTTAGCTTCTTTCTGTT+TGG + chr3_2:48517804-48517823 Msa0408610:intron 40.0%
TGGAAACATATGTAGACGCA+CGG + chr3_2:48517825-48517844 Msa0408610:intron 40.0%
!! TTGTCATAAGCCGTTTTCAC+AGG + chr3_2:48518042-48518061 Msa0408610:intron 40.0%
TTTGCAGCTTATAGCACAAG+CGG + chr3_2:48518219-48518238 Msa0408610:intron 40.0%
TAATTGATATTGGGCCTGTG+TGG + chr3_2:48518254-48518273 Msa0408610:intron 40.0%
! CATCCTATCGACTAAATCAC+TGG + chr3_2:48518313-48518332 Msa0408610:intron 40.0%
ACAACTGCAACCAATTTCAC+AGG + chr3_2:48518356-48518375 Msa0408610:intron 40.0%
!!! CTGCTTTTTGCTTAGCTGTA+AGG - chr3_2:48518379-48518398 Msa0408600:intron 40.0%
CTATTGTAACGGTTCCAACA+AGG - chr3_2:48518579-48518598 Msa0408600:intron 40.0%
!!! ATGATGGCTTTTTTTTCGGC+CGG + chr3_2:48518669-48518688 Msa0408610:intron 40.0%
! ACAGGTTGAGAGCTTCTAAA+GGG + chr3_2:48518707-48518726 Msa0408610:CDS 40.0%
! AACAGGTTGAGAGCTTCTAA+AGG + chr3_2:48518708-48518727 Msa0408610:CDS 40.0%
! TGCTATTTGCAAGTGACAGT+TGG - chr3_2:48518805-48518824 Msa0408600:intron 40.0%
TATTTGCAAGTGACAGTTGG+AGG - chr3_2:48518808-48518827 Msa0408600:intron 40.0%
TGTGCATGACATCACTAACA+AGG - chr3_2:48519114-48519133 Msa0408600:intron 40.0%
GTGCATGACATCACTAACAA+GGG - chr3_2:48519115-48519134 Msa0408600:intron 40.0%
GGAAGTAACACGAACCTTTA+TGG - chr3_2:48519136-48519155 Msa0408600:intron 40.0%
ATGCCGATGCTTTAGTATAG+AGG - chr3_2:48519463-48519482 Msa0408600:intron 40.0%
!!! TTGCACTGGTTTTTGCTTTC+GGG - chr3_2:48519512-48519531 Msa0408600:intron 40.0%
ATTAAGGCACAGGTTAGAGA+TGG + chr3_2:48519556-48519575 None:intergenic 40.0%
AAGGTCAAGCAAATGGTAGT+GGG + chr3_2:48519672-48519691 None:intergenic 40.0%
TTGACCTTGATGTTTCTCTG+TGG - chr3_2:48519684-48519703 Msa0408600:three_prime_UTR 40.0%
! ATGGATTGAAGAGAACATGC+TGG + chr3_2:48519731-48519750 None:intergenic 40.0%
! TGTCCTTCTTTTATTGCCCA+TGG - chr3_2:48519808-48519827 Msa0408600:three_prime_UTR 40.0%
CCTTGGATAGTTGTGGAATA+TGG + chr3_2:48519856-48519875 None:intergenic 40.0%
CCATATTCCACAACTATCCA+AGG - chr3_2:48519853-48519872 Msa0408600:three_prime_UTR 40.0%
CAATTCACCTTGGATAGTTG+TGG + chr3_2:48519863-48519882 None:intergenic 40.0%
TAGGATTGTGGAAAATCCCT+TGG + chr3_2:48519896-48519915 None:intergenic 40.0%
!! GCAACAAATGATGGACACAA+TGG + chr3_2:48519920-48519939 None:intergenic 40.0%
CAGAACAGTGCAACAAATGA+TGG + chr3_2:48519929-48519948 None:intergenic 40.0%
! CATCATTTGTTGCACTGTTC+TGG - chr3_2:48519927-48519946 Msa0408600:three_prime_UTR 40.0%
ACCAACTGAATCATGTTCAC+GGG - chr3_2:48520810-48520829 Msa0408600:intron 40.0%
AGGTAAGCCTTAAATGAACG+GGG - chr3_2:48520857-48520876 Msa0408600:intron 40.0%
GCTTCACCTAGAGGAAATTA+AGG + chr3_2:48520921-48520940 None:intergenic 40.0%
CCAATTACCACCAAAGATGA+AGG + chr3_2:48520952-48520971 None:intergenic 40.0%
! CCTTCATCTTTGGTGGTAAT+TGG - chr3_2:48520949-48520968 Msa0408600:intron 40.0%
AGATGAAACAAGCTTGCGAA+GGG + chr3_2:48520985-48521004 None:intergenic 40.0%
TACAATGTAATGGCTATGGC+AGG + chr3_2:48521008-48521027 None:intergenic 40.0%
! TTGATCTATTTTGCCTCGAG+AGG + chr3_2:48521144-48521163 None:intergenic 40.0%
GTTTGAGGGATACCTATTTG+CGG + chr3_2:48521509-48521528 None:intergenic 40.0%
GGGTTGCGATTAATATGTAG+TGG + chr3_2:48521623-48521642 None:intergenic 40.0%
CAAAATCGAAGATATGGCAG+GGG - chr3_2:48521826-48521845 Msa0408600:CDS 40.0%
AAAATCGAAGATATGGCAGG+GGG - chr3_2:48521827-48521846 Msa0408600:CDS 40.0%
TCTTGTTAACTATTGCCTCC+CGG - chr3_2:48522486-48522505 Msa0408600:intron 40.0%
! TTTTTCCTTAACTAGTGCCC+CGG + chr3_2:48522508-48522527 None:intergenic 40.0%
CTAGTGTTCCAGGATAGTTA+AGG + chr3_2:48522622-48522641 None:intergenic 40.0%
TGAGCATATATGGTTGGGAT+GGG + chr3_2:48522876-48522895 None:intergenic 40.0%
TTGAGCATATATGGTTGGGA+TGG + chr3_2:48522877-48522896 None:intergenic 40.0%
! GGTGTTGAGCATATATGGTT+GGG + chr3_2:48522881-48522900 None:intergenic 40.0%
! TGGTGTTGAGCATATATGGT+TGG + chr3_2:48522882-48522901 None:intergenic 40.0%
! GTGATGGTGTTGAGCATATA+TGG + chr3_2:48522886-48522905 None:intergenic 40.0%
GTGGTAGACTCACAATATTG+AGG + chr3_2:48523397-48523416 None:intergenic 40.0%
CGGAAATTGGCCATTGAATT+AGG + chr3_2:48523597-48523616 None:intergenic 40.0%
GTGGAAGATCTTCATGTCAA+CGG + chr3_2:48523617-48523636 None:intergenic 40.0%
TACCCTGTCAAGATTCCATA+CGG - chr3_2:48523716-48523735 Msa0408600:intron 40.0%
ATCCGTATGGAATCTTGACA+GGG + chr3_2:48523721-48523740 None:intergenic 40.0%
AATCCGTATGGAATCTTGAC+AGG + chr3_2:48523722-48523741 None:intergenic 40.0%
GCAAGAATCTTGAATCCGTA+TGG + chr3_2:48523734-48523753 None:intergenic 40.0%
! TCTGGAGTAATTGGCCAATT+TGG - chr3_2:48523920-48523939 Msa0408600:intron 40.0%
TTGAGAAGGCTACTAATGTG+CGG + chr3_2:48524090-48524109 None:intergenic 40.0%
CATTAGTAGCCTTCTCAACA+TGG - chr3_2:48524092-48524111 Msa0408600:CDS 40.0%
! TGTTTGGAACCATGTTGAGA+AGG + chr3_2:48524104-48524123 None:intergenic 40.0%
TGTGCATGATATCGCTAACA+AGG - chr3_2:48524196-48524215 Msa0408600:five_prime_UTR 40.0%
GTGCATGATATCGCTAACAA+GGG - chr3_2:48524197-48524216 Msa0408600:five_prime_UTR 40.0%
AGATGCTTCTTGCACAGACT+CGG + chr3_2:48514363-48514382 None:intergenic 45.0%
ACGCCTTCAATCAGAACTGT+CGG - chr3_2:48515320-48515339 Msa0408600:intron 45.0%
AGCTTGGAAGATCGTTCAAG+AGG - chr3_2:48515498-48515517 Msa0408600:intron 45.0%
TCAGACATGCCTTCAATCTG+AGG + chr3_2:48516110-48516129 None:intergenic 45.0%
AAGGCATGTCTGACATGTGT+CGG - chr3_2:48516117-48516136 Msa0408600:intron 45.0%
!! TGAAGCATTGACACGGACAT+TGG + chr3_2:48516229-48516248 None:intergenic 45.0%
!! TCCTTGAGAAGGTACCATCT+TGG - chr3_2:48516291-48516310 Msa0408600:intron 45.0%
TCCAAGATGGTACCTTCTCA+AGG + chr3_2:48516295-48516314 None:intergenic 45.0%
GAGCTCAGAAAAGTCCAAGA+TGG + chr3_2:48516308-48516327 None:intergenic 45.0%
ACACCTGTTGGAGTGATTTG+TGG - chr3_2:48516636-48516655 Msa0408600:intron 45.0%
GCTGAATCCAGAAAGAAAGC+CGG - chr3_2:48516788-48516807 Msa0408600:intron 45.0%
CACATACATCTGCTAAGCAC+CGG + chr3_2:48516810-48516829 None:intergenic 45.0%
! TTATTTCTTGCTGCAGCAGC+AGG + chr3_2:48516889-48516908 None:intergenic 45.0%
GTTATAGCCCTGTTGTGTAG+CGG - chr3_2:48517373-48517392 Msa0408600:intron 45.0%
!!! GTGCTATTTTCTGCGATCTG+TGG - chr3_2:48517408-48517427 Msa0408600:intron 45.0%
TTGTTCGAGCCACCATTCTA+CGG + chr3_2:48517629-48517648 Msa0408610:CDS 45.0%
!!! GCATGCGTCATTAGCCTTTT+GGG + chr3_2:48517689-48517708 Msa0408610:intron 45.0%
!!! TGCATGCGTCATTAGCCTTT+TGG + chr3_2:48517690-48517709 Msa0408610:intron 45.0%
!! GTTTATTGGTGTTGACGCAC+GGG + chr3_2:48517739-48517758 Msa0408610:intron 45.0%
TTGTGGGTGTGGCTGTTTAT+TGG + chr3_2:48517753-48517772 Msa0408610:intron 45.0%
GTTGTGGGGTGTATCTTTGT+GGG + chr3_2:48517769-48517788 Msa0408610:intron 45.0%
!! TTCTGTTTGGTGTGTAGCAG+TGG + chr3_2:48517791-48517810 Msa0408610:intron 45.0%
GGAAACATATGTAGACGCAC+GGG + chr3_2:48517824-48517843 Msa0408610:intron 45.0%
TTTGGGAGAGCCTGTGAAAA+CGG - chr3_2:48518029-48518048 Msa0408600:intron 45.0%
ACATTTCTCACGTCCCAATG+TGG - chr3_2:48518936-48518955 Msa0408600:intron 45.0%
! TGTTTGGAACCACGTCGAAA+AGG + chr3_2:48519022-48519041 Msa0408610:CDS 45.0%
! CACAAATGAAAGCGCGTGAT+TGG - chr3_2:48519061-48519080 Msa0408600:intron 45.0%
ATGAAAGTAGCCAACCAACG+CGG + chr3_2:48519089-48519108 Msa0408610:CDS 45.0%
AGCACAGTTAGGTAGAGTAG+AGG - chr3_2:48519274-48519293 Msa0408600:intron 45.0%
!! GATTGGCCTGCAAATAGCTA+TGG + chr3_2:48519628-48519647 None:intergenic 45.0%
! AGGTCAAGCAAATGGTAGTG+GGG + chr3_2:48519671-48519690 None:intergenic 45.0%
CAAGGTCAAGCAAATGGTAG+TGG + chr3_2:48519673-48519692 None:intergenic 45.0%
GTAGCCACAGAGAAACATCA+AGG + chr3_2:48519691-48519710 None:intergenic 45.0%
! AGAGAACATGCTGGTAGTGA+AGG + chr3_2:48519722-48519741 None:intergenic 45.0%
GGACACAATGGATAGGATTG+TGG + chr3_2:48519908-48519927 None:intergenic 45.0%
!! TTTTTGGTCAAGTAGACCCG+TGG - chr3_2:48520714-48520733 Msa0408600:intron 45.0%
TCCCGTGAACATGATTCAGT+TGG + chr3_2:48520814-48520833 None:intergenic 45.0%
GCTTGTGACACCTTCATCTT+TGG - chr3_2:48520939-48520958 Msa0408600:intron 45.0%
TGTGACACCTTCATCTTTGG+TGG - chr3_2:48520942-48520961 Msa0408600:intron 45.0%
GAGATGAAACAAGCTTGCGA+AGG + chr3_2:48520986-48521005 None:intergenic 45.0%
!!! GCACATTGATTTTCCTCTCG+AGG - chr3_2:48521128-48521147 Msa0408600:intron 45.0%
GGTTCACGTATAAATGCCAG+TGG + chr3_2:48521433-48521452 None:intergenic 45.0%
GGATCGTAATCTTTGGTCCA+AGG + chr3_2:48521559-48521578 None:intergenic 45.0%
ACCCCAAACATGAGTTTCCA+AGG - chr3_2:48521639-48521658 Msa0408600:intron 45.0%
GCCTTGGAAACTCATGTTTG+GGG + chr3_2:48521643-48521662 None:intergenic 45.0%
GGCCTTGGAAACTCATGTTT+GGG + chr3_2:48521644-48521663 None:intergenic 45.0%
! TGGCCTTGGAAACTCATGTT+TGG + chr3_2:48521645-48521664 None:intergenic 45.0%
! GGGGATGAAATTTTCCGTGA+AGG - chr3_2:48521938-48521957 Msa0408600:intron 45.0%
CTTGTTAACTATTGCCTCCC+GGG - chr3_2:48522487-48522506 Msa0408600:intron 45.0%
TTGTTAACTATTGCCTCCCG+GGG - chr3_2:48522488-48522507 Msa0408600:intron 45.0%
! TTTTCCTTAACTAGTGCCCC+GGG + chr3_2:48522507-48522526 None:intergenic 45.0%
ACGGATTCAAGATTCTTGCC+AGG - chr3_2:48523735-48523754 Msa0408600:intron 45.0%
ACGCATGACTGAATCCATGT+TGG - chr3_2:48524154-48524173 Msa0408600:exon 45.0%
!!! TTAATAAATGTTATATTTTT+TGG - chr3_2:48516003-48516022 Msa0408600:intron 5.0%
!!! TTTTTTTTTTTTTTTTGAAA+CGG - chr3_2:48517517-48517536 Msa0408600:intron 5.0%
!! TGAAAATAATTTATATTATA+AGG - chr3_2:48520427-48520446 Msa0408600:intron 5.0%
TCTAATAGGCCACTGTGTCG+TGG - chr3_2:48514319-48514338 Msa0408600:three_prime_UTR 50.0%
AGAATGGAACCACGACACAG+TGG + chr3_2:48514331-48514350 None:intergenic 50.0%
ACTGTGTCGTGGTTCCATTC+TGG - chr3_2:48514330-48514349 Msa0408600:three_prime_UTR 50.0%
!! GACTCGGTTTGGTACCAGAA+TGG + chr3_2:48514347-48514366 None:intergenic 50.0%
! CTTCTTGCACAGACTCGGTT+TGG + chr3_2:48514358-48514377 None:intergenic 50.0%
! GTTCTGATTGAAGGCGTGTC+AGG + chr3_2:48515317-48515336 None:intergenic 50.0%
! GCACCGACAGTTCTGATTGA+AGG + chr3_2:48515326-48515345 None:intergenic 50.0%
ATTCTGGATCAGGAGCAGAG+TGG - chr3_2:48515436-48515455 Msa0408600:intron 50.0%
GGACCGATACCTCAGATTGA+AGG - chr3_2:48516098-48516117 Msa0408600:intron 50.0%
AACATGCTTGAGTCGTGTCC+TGG - chr3_2:48516353-48516372 Msa0408600:intron 50.0%
!! CTAAGCACCGGCTTTCTTTC+TGG + chr3_2:48516798-48516817 None:intergenic 50.0%
CGGTGCTTAGCAGATGTATG+TGG - chr3_2:48516808-48516827 Msa0408600:intron 50.0%
GTGGAAAGCCTTTCTCCAGA+GGG - chr3_2:48517187-48517206 Msa0408600:intron 50.0%
CTTATTAGTGCGCCTTGCAC+GGG + chr3_2:48517562-48517581 Msa0408610:intron 50.0%
GCTTATTAGTGCGCCTTGCA+CGG + chr3_2:48517563-48517582 Msa0408610:intron 50.0%
GCAAGGCGCACTAATAAGCT+CGG - chr3_2:48517564-48517583 Msa0408600:intron 50.0%
CAAGGCGCACTAATAAGCTC+GGG - chr3_2:48517565-48517584 Msa0408600:intron 50.0%
GGAAATCGGTTGCCGTAGAA+TGG - chr3_2:48517614-48517633 Msa0408600:intron 50.0%
AATCGGTTGCCGTAGAATGG+TGG - chr3_2:48517617-48517636 Msa0408600:intron 50.0%
GGTTGTGGGGTGTATCTTTG+TGG + chr3_2:48517770-48517789 Msa0408610:intron 50.0%
TGGTGTGTAGCAGTGGTTGT+GGG + chr3_2:48517784-48517803 Msa0408610:intron 50.0%
TTGGTGTGTAGCAGTGGTTG+TGG + chr3_2:48517785-48517804 Msa0408610:intron 50.0%
AGGCTCTCCCAAATAGTCTC+AGG + chr3_2:48518022-48518041 Msa0408610:intron 50.0%
TTGCAAGTGACAGTTGGAGG+AGG - chr3_2:48518811-48518830 Msa0408600:intron 50.0%
TGACAGTTGGAGGAGGAAAG+CGG - chr3_2:48518818-48518837 Msa0408600:intron 50.0%
! CGTTAGTAGCCTTTTCGACG+TGG - chr3_2:48519010-48519029 Msa0408600:intron 50.0%
TTCGACGTGGTTCCAAACAC+AGG - chr3_2:48519023-48519042 Msa0408600:intron 50.0%
GCAGGCCAATCTTCATCTTC+TGG - chr3_2:48519637-48519656 Msa0408600:three_prime_UTR 50.0%
! GCTGGTAGTGAAGGCAGAAA+AGG + chr3_2:48519713-48519732 None:intergenic 50.0%
! TGTTGCACTGTTCTGGCTAC+TGG - chr3_2:48519934-48519953 Msa0408600:three_prime_UTR 50.0%
! CTGTTCTGGCTACTGGAAAC+TGG - chr3_2:48519941-48519960 Msa0408600:exon 50.0%
ACCACCTGAAATTCTGGCCA+CGG + chr3_2:48520734-48520753 None:intergenic 50.0%
GTGTCACAAGCTTCACCTAG+AGG + chr3_2:48520930-48520949 None:intergenic 50.0%
TCATCCTACACTCGGAAACC+TGG + chr3_2:48523756-48523775 None:intergenic 50.0%
CACATTTCTCACCCCCAATG+TGG - chr3_2:48524017-48524036 Msa0408600:intron 50.0%
ATTCACGGCCACACCACATT+GGG + chr3_2:48524033-48524052 None:intergenic 50.0%
AATTCACGGCCACACCACAT+TGG + chr3_2:48524034-48524053 None:intergenic 50.0%
TGTGATGCTCACACCTGCAC+TGG - chr3_2:48517162-48517181 Msa0408600:intron 55.0%
CGTGGAAAGCCTTTCTCCAG+AGG - chr3_2:48517186-48517205 Msa0408600:intron 55.0%
TCAAATTACCCTGCGCCCTC+TGG + chr3_2:48517205-48517224 Msa0408610:intron 55.0%
TTGACGCACGGGTATGCATG+TGG + chr3_2:48517728-48517747 Msa0408610:intron 55.0%
GGGGTGTATCTTTGTGGGTG+TGG + chr3_2:48517764-48517783 Msa0408610:intron 55.0%
GGTGTGTAGCAGTGGTTGTG+GGG + chr3_2:48517783-48517802 Msa0408610:intron 55.0%
TCTCACGTCCCAATGTGGTG+TGG - chr3_2:48518941-48518960 Msa0408600:intron 55.0%
ATCCACGGCCACACCACATT+GGG + chr3_2:48518952-48518971 Msa0408610:CDS 55.0%
AATCCACGGCCACACCACAT+TGG + chr3_2:48518953-48518972 Msa0408610:CDS 55.0%
! GTGATTGGAACCGCGTTGGT+TGG - chr3_2:48519076-48519095 Msa0408600:intron 55.0%
AGACCCGTGGCCAGAATTTC+AGG - chr3_2:48520727-48520746 Msa0408600:intron 55.0%
CCACCTGAAATTCTGGCCAC+GGG + chr3_2:48520733-48520752 None:intergenic 55.0%
CTTGCCAGGTTTCCGAGTGT+AGG - chr3_2:48523749-48523768 Msa0408600:intron 55.0%
TTCTCACCCCCAATGTGGTG+TGG - chr3_2:48524022-48524041 Msa0408600:intron 55.0%
TTCACGGCCACACCACATTG+GGG + chr3_2:48524032-48524051 None:intergenic 55.0%
GCTGCAGGACCCTCGTTAAC+TGG + chr3_2:48517020-48517039 None:intergenic 60.0%
AGGCTTTCCACGTCCAGTGC+AGG + chr3_2:48517178-48517197 Msa0408610:intron 60.0%
TAAACCGACGAGCCCGTGCA+AGG - chr3_2:48517547-48517566 Msa0408600:intron 60.0%
GGCGCACTAATAAGCTCGGG+TGG - chr3_2:48517568-48517587 Msa0408600:intron 60.0%
CTGAGGCGTGTCTCACAAGC+CGG - chr3_2:48518647-48518666 Msa0408600:intron 60.0%
CCCGTGGCCAGAATTTCAGG+TGG - chr3_2:48520730-48520749 Msa0408600:intron 60.0%
TCCTTAACTAGTGCCCCGGG+AGG + chr3_2:48522504-48522523 None:intergenic 60.0%
TCACGGCCACACCACATTGG+GGG + chr3_2:48524031-48524050 None:intergenic 60.0%
GCTCACACCTGCACTGGACG+TGG - chr3_2:48517168-48517187 Msa0408600:intron 65.0%
! AGCCTTTCTCCAGAGGGCGC+AGG - chr3_2:48517193-48517212 Msa0408600:intron 65.0%
! GCCTTTCTCCAGAGGGCGCA+GGG - chr3_2:48517194-48517213 Msa0408600:intron 65.0%
! ACCCTGCGCCCTCTGGAGAA+AGG + chr3_2:48517198-48517217 Msa0408610:intron 65.0%
GTCCCAATGTGGTGTGGCCG+TGG - chr3_2:48518947-48518966 Msa0408600:intron 65.0%
GCGCGTGATTGGAACCGCGT+TGG - chr3_2:48519072-48519091 Msa0408600:intron 65.0%
! GCCTCCCGGGGCACTAGTTA+AGG - chr3_2:48522500-48522519 Msa0408600:intron 65.0%
ACGAGGGTCCTGCAGCGAGC+CGG - chr3_2:48517024-48517043 Msa0408600:intron 70.0%
!! CCATGAAGCCGGCTCGCTGC+AGG + chr3_2:48517035-48517054 None:intergenic 70.0%
! CCTGCAGCGAGCCGGCTTCA+TGG - chr3_2:48517032-48517051 Msa0408600:intron 70.0%
TGCGCCTTGCACGGGCTCGT+CGG + chr3_2:48517554-48517573 Msa0408610:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 48514295 48524353 48514295 ID=Msa0408600;Name=Msa0408600
chr3_2 mRNA 48514295 48524353 48514295 ID=Msa0408600-mRNA-1;Parent=Msa0408600;Name=Msa0408600-mRNA-1;_AED=0.11;_eAED=0.11;_QI=190|0.88|0.9|1|0.88|0.8|10|582|260
chr3_2 exon 48514295 48514499 48514295 ID=Msa0408600-mRNA-1:exon:9452;Parent=Msa0408600-mRNA-1
chr3_2 exon 48519581 48520026 48519581 ID=Msa0408600-mRNA-1:exon:9451;Parent=Msa0408600-mRNA-1
chr3_2 exon 48520152 48520205 48520152 ID=Msa0408600-mRNA-1:exon:9450;Parent=Msa0408600-mRNA-1
chr3_2 exon 48521433 48521506 48521433 ID=Msa0408600-mRNA-1:exon:9449;Parent=Msa0408600-mRNA-1
chr3_2 exon 48521595 48521652 48521595 ID=Msa0408600-mRNA-1:exon:9448;Parent=Msa0408600-mRNA-1
chr3_2 exon 48521727 48521849 48521727 ID=Msa0408600-mRNA-1:exon:9447;Parent=Msa0408600-mRNA-1
chr3_2 exon 48522789 48522998 48522789 ID=Msa0408600-mRNA-1:exon:9446;Parent=Msa0408600-mRNA-1
chr3_2 exon 48523129 48523213 48523129 ID=Msa0408600-mRNA-1:exon:9445;Parent=Msa0408600-mRNA-1
chr3_2 exon 48523622 48523647 48523622 ID=Msa0408600-mRNA-1:exon:9444;Parent=Msa0408600-mRNA-1
chr3_2 exon 48524080 48524353 48524080 ID=Msa0408600-mRNA-1:exon:9443;Parent=Msa0408600-mRNA-1
chr3_2 five_prime_UTR 48524164 48524353 48524164 ID=Msa0408600-mRNA-1:five_prime_utr;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48524080 48524163 48524080 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48523622 48523647 48523622 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48523129 48523213 48523129 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48522789 48522998 48522789 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48521727 48521849 48521727 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48521595 48521652 48521595 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48521433 48521506 48521433 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48520152 48520205 48520152 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 CDS 48519958 48520026 48519958 ID=Msa0408600-mRNA-1:cds;Parent=Msa0408600-mRNA-1
chr3_2 three_prime_UTR 48519581 48519957 48519581 ID=Msa0408600-mRNA-1:three_prime_utr;Parent=Msa0408600-mRNA-1
chr3_2 three_prime_UTR 48514295 48514499 48514295 ID=Msa0408600-mRNA-1:three_prime_utr;Parent=Msa0408600-mRNA-1
Gene Sequence

>Msa0408600

ATGAATAAGATTTTGGTTTGGTTTCAACAATTTGTCGTGTTCTTGTTGCTTACAAGGGTTTCTTCACTTCCACACATTGATGATGGCCATGTAGATTCAGATGCTGCAAGAATTCTGGATCAGGAGCAGAGTGGCGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATCGTTCAAGAGTATTTGACGACATTTGTGGAGAAAGAAAAATATAATATCTCAAGAAGGTGCAGGCTTCACCCTGACAATGATATATATAGAGATCAGGAACAACATAAATCTCATATAGATATAAATGAATGGCAGTGTGGATACTGTAAGAAAACTTTCTACGAAGAGAAACATCTTGATCAACATTTTGACAACAGACACTCCAATTTACTTAATTTGAAAGAAAGCCGGTGCTTAGCAGATGTATGTGGAGCACTGCACTGTGACCATGAAATTAATTCTGGGTCAAAAAAATCAAAGTGCAATCCTGCTGCTGCAGCAAGAAATAAGCATATATGTGAGACCATAGCTGATAGTTGTTTTCCAGTTAACGAGGGTCCTGCAGCGAGCCGGCTTCATGAATTCTTCTTGCATCAATTCTGTGATGCTCACACCTGCACTGGACGTGGAAAGCCTTTCTCCAGAGGGCGCAGGAAAAAGACAAATGTGTTCTACATAGTTGCCTCCATTTTTCTTGTGATGTTGTTGAGGATTGAAAAAGGAAAATCAAATGCTGAGGCGTGTCTCACAAGCCGGCCGAAAAAAAAGCCATCATAA

Protein sequence

>Msa0408600

MNKILVWFQQFVVFLLLTRVSSLPHIDDGHVDSDAARILDQEQSGDHQIHCSRERSRIAWKIVQEYLTTFVEKEKYNISRRCRLHPDNDIYRDQEQHKSHIDINEWQCGYCKKTFYEEKHLDQHFDNRHSNLLNLKESRCLADVCGALHCDHEINSGSKKSKCNPAAAARNKHICETIADSCFPVNEGPAASRLHEFFLHQFCDAHTCTGRGKPFSRGRRKKTNVFYIVASIFLVMLLRIEKGKSNAEACLTSRPKKKPS*