Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0410780 | KEH34625.1 | 92.446 | 556 | 31 | 4 | 1 | 554 | 1 | 547 | 0.0 | 1018 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0410780 | sp|A0A396IUP1|DELA1_MEDTR | 92.446 | 556 | 31 | 4 | 1 | 554 | 48 | 594 | 0.0 | 1018 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0410780 | A0A2Z6NQX5 | 81.607 | 560 | 63 | 13 | 13 | 554 | 1 | 538 | 0.0 | 881 |
Gene ID | Type | Classification |
---|---|---|
Msa0410780 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0410780 | MtrunA17_Chr3g0110971 | 92.446 | 556 | 31 | 4 | 1 | 554 | 48 | 594 | 0.0 | 1018 |
Msa0410780 | MtrunA17_Chr8g0376381 | 58.602 | 558 | 157 | 15 | 7 | 548 | 24 | 523 | 0.0 | 609 |
Msa0410780 | MtrunA17_Chr2g0306641 | 44.689 | 546 | 217 | 14 | 13 | 547 | 16 | 487 | 2.90e-142 | 420 |
Msa0410780 | MtrunA17_Chr7g0224271 | 34.972 | 529 | 273 | 15 | 51 | 547 | 184 | 673 | 3.73e-82 | 270 |
Msa0410780 | MtrunA17_Chr8g0357601 | 34.889 | 407 | 212 | 13 | 166 | 548 | 176 | 553 | 9.09e-70 | 234 |
Msa0410780 | MtrunA17_Chr5g0447691 | 34.937 | 395 | 217 | 9 | 169 | 547 | 174 | 544 | 1.33e-65 | 223 |
Msa0410780 | MtrunA17_Chr4g0057891 | 33.498 | 406 | 218 | 13 | 166 | 547 | 143 | 520 | 1.55e-59 | 206 |
Msa0410780 | MtrunA17_Chr1g0159461 | 34.518 | 394 | 212 | 9 | 173 | 547 | 226 | 592 | 2.98e-59 | 207 |
Msa0410780 | MtrunA17_Chr5g0445331 | 31.840 | 424 | 240 | 10 | 146 | 547 | 136 | 532 | 3.39e-59 | 205 |
Msa0410780 | MtrunA17_Chr3g0101141 | 33.842 | 393 | 224 | 11 | 169 | 547 | 172 | 542 | 4.60e-59 | 205 |
Msa0410780 | MtrunA17_Chr4g0076091 | 31.726 | 394 | 224 | 10 | 172 | 546 | 175 | 542 | 4.60e-58 | 202 |
Msa0410780 | MtrunA17_Chr7g0245601 | 35.476 | 389 | 200 | 12 | 176 | 549 | 442 | 794 | 4.85e-57 | 204 |
Msa0410780 | MtrunA17_Chr2g0319091 | 32.500 | 400 | 218 | 9 | 169 | 546 | 209 | 578 | 1.54e-55 | 196 |
Msa0410780 | MtrunA17_Chr1g0183641 | 34.264 | 394 | 216 | 12 | 164 | 546 | 115 | 476 | 1.69e-55 | 194 |
Msa0410780 | MtrunA17_Chr3g0125811 | 32.234 | 394 | 221 | 9 | 173 | 547 | 204 | 570 | 2.49e-54 | 193 |
Msa0410780 | MtrunA17_Chr4g0038761 | 34.884 | 387 | 205 | 10 | 176 | 547 | 88 | 442 | 3.50e-52 | 184 |
Msa0410780 | MtrunA17_Chr2g0294471 | 28.642 | 405 | 256 | 6 | 159 | 548 | 191 | 577 | 2.61e-49 | 179 |
Msa0410780 | MtrunA17_Chr4g0031731 | 30.120 | 415 | 255 | 8 | 147 | 545 | 229 | 624 | 7.26e-49 | 179 |
Msa0410780 | MtrunA17_Chr4g0031711 | 30.529 | 416 | 253 | 8 | 147 | 546 | 337 | 732 | 2.30e-48 | 179 |
Msa0410780 | MtrunA17_Chr2g0294461 | 28.571 | 413 | 249 | 6 | 159 | 548 | 197 | 586 | 3.79e-48 | 176 |
Msa0410780 | MtrunA17_Chr4g0031701 | 30.095 | 422 | 260 | 8 | 140 | 545 | 222 | 624 | 5.89e-48 | 176 |
Msa0410780 | MtrunA17_Chr5g0424131 | 33.659 | 410 | 217 | 14 | 166 | 546 | 115 | 498 | 5.67e-47 | 171 |
Msa0410780 | MtrunA17_Chr2g0290241 | 29.250 | 400 | 234 | 12 | 169 | 547 | 54 | 425 | 1.33e-46 | 169 |
Msa0410780 | MtrunA17_Chr4g0057291 | 30.673 | 401 | 233 | 9 | 166 | 546 | 286 | 661 | 1.18e-45 | 171 |
Msa0410780 | MtrunA17_Chr4g0039661 | 32.648 | 389 | 229 | 12 | 169 | 547 | 190 | 555 | 1.97e-45 | 168 |
Msa0410780 | MtrunA17_Chr3g0114841 | 31.106 | 434 | 224 | 13 | 160 | 553 | 108 | 506 | 6.59e-45 | 166 |
Msa0410780 | MtrunA17_Chr2g0328391 | 29.136 | 405 | 240 | 8 | 163 | 546 | 290 | 668 | 4.67e-44 | 166 |
Msa0410780 | MtrunA17_Chr4g0038851 | 28.825 | 451 | 241 | 10 | 160 | 547 | 36 | 469 | 1.73e-43 | 161 |
Msa0410780 | MtrunA17_Chr1g0200401 | 31.100 | 418 | 220 | 18 | 166 | 547 | 74 | 459 | 1.92e-43 | 160 |
Msa0410780 | MtrunA17_Chr2g0328341 | 30.827 | 399 | 239 | 10 | 162 | 546 | 262 | 637 | 1.17e-42 | 161 |
Msa0410780 | MtrunA17_Chr4g0031741 | 29.771 | 393 | 245 | 10 | 165 | 546 | 277 | 649 | 6.95e-42 | 159 |
Msa0410780 | MtrunA17_Chr7g0238891 | 28.967 | 397 | 243 | 10 | 167 | 547 | 367 | 740 | 8.39e-42 | 160 |
Msa0410780 | MtrunA17_Chr4g0031721 | 28.173 | 394 | 248 | 8 | 167 | 546 | 311 | 683 | 3.71e-41 | 157 |
Msa0410780 | MtrunA17_Chr2g0328411 | 28.788 | 396 | 250 | 9 | 166 | 550 | 283 | 657 | 6.39e-41 | 157 |
Msa0410780 | MtrunA17_Chr2g0328431 | 28.244 | 393 | 248 | 9 | 166 | 546 | 283 | 653 | 3.28e-39 | 152 |
Msa0410780 | MtrunA17_Chr2g0328381 | 29.723 | 397 | 242 | 10 | 164 | 546 | 267 | 640 | 3.29e-39 | 152 |
Msa0410780 | MtrunA17_Chr7g0270031 | 25.871 | 402 | 264 | 7 | 159 | 548 | 176 | 555 | 1.82e-36 | 142 |
Msa0410780 | MtrunA17_Chr2g0328371 | 34.749 | 259 | 140 | 8 | 244 | 496 | 11 | 246 | 3.03e-35 | 132 |
Msa0410780 | MtrunA17_Chr2g0328361 | 29.000 | 400 | 220 | 9 | 162 | 546 | 264 | 614 | 8.07e-35 | 139 |
Msa0410780 | MtrunA17_Chr5g0401131 | 28.148 | 405 | 248 | 7 | 165 | 547 | 107 | 490 | 1.06e-34 | 137 |
Msa0410780 | MtrunA17_Chr2g0328401 | 27.500 | 360 | 230 | 7 | 165 | 513 | 283 | 622 | 3.96e-34 | 137 |
Msa0410780 | MtrunA17_Chr8g0383981 | 31.472 | 394 | 220 | 15 | 169 | 546 | 136 | 495 | 8.61e-33 | 131 |
Msa0410780 | MtrunA17_Chr7g0230771 | 28.165 | 387 | 243 | 10 | 169 | 547 | 372 | 731 | 1.73e-31 | 129 |
Msa0410780 | MtrunA17_Chr1g0194621 | 25.542 | 415 | 258 | 10 | 158 | 548 | 132 | 519 | 4.58e-31 | 126 |
Msa0410780 | MtrunA17_Chr5g0396491 | 38.182 | 165 | 89 | 3 | 383 | 547 | 327 | 478 | 2.76e-30 | 124 |
Msa0410780 | MtrunA17_Chr5g0396491 | 31.034 | 232 | 133 | 4 | 160 | 379 | 44 | 260 | 1.79e-27 | 115 |
Msa0410780 | MtrunA17_Chr7g0230731 | 28.424 | 387 | 242 | 11 | 169 | 547 | 369 | 728 | 2.91e-30 | 125 |
Msa0410780 | MtrunA17_Chr3g0085361 | 40.994 | 161 | 80 | 4 | 388 | 548 | 206 | 351 | 8.61e-30 | 120 |
Msa0410780 | MtrunA17_Chr3g0085361 | 29.167 | 144 | 90 | 2 | 236 | 379 | 13 | 144 | 1.65e-14 | 75.1 |
Msa0410780 | MtrunA17_Chr6g0468561 | 28.354 | 395 | 239 | 11 | 171 | 547 | 294 | 662 | 1.56e-29 | 123 |
Msa0410780 | MtrunA17_Chr7g0236851 | 28.471 | 425 | 250 | 14 | 143 | 546 | 265 | 656 | 4.00e-29 | 122 |
Msa0410780 | MtrunA17_Chr3g0085681 | 39.752 | 161 | 83 | 3 | 388 | 548 | 291 | 437 | 1.40e-28 | 118 |
Msa0410780 | MtrunA17_Chr3g0085681 | 29.167 | 216 | 132 | 4 | 173 | 379 | 26 | 229 | 2.14e-22 | 100 |
Msa0410780 | MtrunA17_Chr5g0401421 | 24.541 | 436 | 241 | 10 | 173 | 546 | 36 | 445 | 6.69e-25 | 107 |
Msa0410780 | MtrunA17_Chr4g0012071 | 26.943 | 386 | 240 | 15 | 173 | 547 | 197 | 551 | 2.33e-24 | 107 |
Msa0410780 | MtrunA17_Chr4g0068471 | 55.238 | 105 | 37 | 3 | 159 | 263 | 23 | 117 | 3.92e-23 | 94.7 |
Msa0410780 | MtrunA17_Chr4g0053901 | 24.424 | 434 | 242 | 12 | 173 | 546 | 60 | 467 | 1.15e-22 | 101 |
Msa0410780 | MtrunA17_Chr2g0329591 | 26.667 | 405 | 239 | 11 | 173 | 547 | 75 | 451 | 2.06e-22 | 100 |
Msa0410780 | MtrunA17_Chr8g0344101 | 24.561 | 399 | 257 | 10 | 173 | 548 | 224 | 601 | 8.40e-21 | 96.3 |
Msa0410780 | MtrunA17_Chr8g0373561 | 25.700 | 393 | 248 | 13 | 169 | 547 | 179 | 541 | 1.37e-20 | 95.5 |
Msa0410780 | MtrunA17_Chr2g0323111 | 27.778 | 162 | 102 | 2 | 385 | 546 | 159 | 305 | 2.68e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0410780 | AT2G01570.1 | 57.705 | 584 | 181 | 12 | 1 | 548 | 29 | 582 | 0.0 | 620 |
Msa0410780 | AT1G14920.1 | 57.801 | 564 | 170 | 9 | 6 | 551 | 20 | 533 | 0.0 | 617 |
Msa0410780 | AT1G66350.1 | 58.242 | 546 | 163 | 11 | 10 | 552 | 28 | 511 | 0.0 | 608 |
Msa0410780 | AT3G03450.1 | 59.675 | 553 | 153 | 14 | 15 | 548 | 45 | 546 | 0.0 | 607 |
Msa0410780 | AT5G17490.1 | 55.172 | 551 | 166 | 14 | 13 | 548 | 33 | 517 | 0.0 | 546 |
Msa0410780 | AT5G48150.1 | 34.772 | 394 | 212 | 9 | 173 | 547 | 123 | 490 | 1.11e-66 | 224 |
Msa0410780 | AT5G48150.4 | 34.772 | 394 | 212 | 9 | 173 | 547 | 123 | 490 | 1.11e-66 | 224 |
Msa0410780 | AT5G48150.2 | 34.772 | 394 | 212 | 9 | 173 | 547 | 123 | 490 | 1.11e-66 | 224 |
Msa0410780 | AT5G48150.3 | 34.772 | 394 | 212 | 9 | 173 | 547 | 123 | 490 | 1.11e-66 | 224 |
Msa0410780 | AT2G04890.1 | 32.494 | 397 | 211 | 9 | 172 | 547 | 53 | 413 | 3.02e-60 | 205 |
Msa0410780 | AT1G50600.3 | 32.668 | 401 | 212 | 11 | 172 | 547 | 159 | 526 | 1.07e-58 | 204 |
Msa0410780 | AT1G50600.2 | 32.668 | 401 | 212 | 11 | 172 | 547 | 234 | 601 | 5.55e-58 | 204 |
Msa0410780 | AT1G50600.1 | 32.668 | 401 | 212 | 11 | 172 | 547 | 230 | 597 | 7.24e-58 | 203 |
Msa0410780 | AT3G54220.1 | 33.787 | 441 | 235 | 13 | 122 | 546 | 250 | 649 | 3.58e-57 | 202 |
Msa0410780 | AT5G41920.1 | 34.414 | 401 | 205 | 12 | 167 | 547 | 38 | 400 | 3.51e-56 | 194 |
Msa0410780 | AT4G17230.1 | 31.172 | 401 | 224 | 8 | 169 | 547 | 155 | 525 | 4.84e-51 | 183 |
Msa0410780 | AT4G17230.2 | 31.172 | 401 | 224 | 8 | 169 | 547 | 155 | 525 | 4.84e-51 | 183 |
Msa0410780 | AT1G21450.1 | 30.633 | 395 | 231 | 8 | 171 | 547 | 224 | 593 | 1.33e-50 | 183 |
Msa0410780 | AT1G07530.1 | 30.769 | 403 | 239 | 12 | 161 | 546 | 385 | 764 | 5.23e-46 | 173 |
Msa0410780 | AT5G59450.1 | 30.051 | 396 | 243 | 10 | 167 | 547 | 222 | 598 | 6.18e-46 | 171 |
Msa0410780 | AT1G50420.1 | 28.717 | 491 | 266 | 13 | 124 | 547 | 6 | 479 | 5.15e-45 | 166 |
Msa0410780 | AT1G63100.1 | 30.657 | 411 | 221 | 15 | 169 | 546 | 249 | 628 | 1.65e-43 | 164 |
Msa0410780 | AT3G46600.2 | 30.412 | 388 | 236 | 10 | 173 | 547 | 5 | 371 | 2.23e-43 | 159 |
Msa0410780 | AT1G63100.2 | 30.657 | 411 | 221 | 15 | 169 | 546 | 274 | 653 | 2.59e-43 | 164 |
Msa0410780 | AT3G46600.3 | 30.203 | 394 | 241 | 10 | 167 | 547 | 175 | 547 | 1.24e-42 | 160 |
Msa0410780 | AT3G46600.1 | 30.203 | 394 | 241 | 10 | 167 | 547 | 207 | 579 | 1.45e-42 | 161 |
Msa0410780 | AT5G66770.1 | 33.247 | 388 | 230 | 12 | 169 | 547 | 217 | 584 | 3.91e-42 | 160 |
Msa0410780 | AT1G55580.1 | 32.416 | 327 | 193 | 7 | 230 | 547 | 138 | 445 | 5.23e-42 | 157 |
Msa0410780 | AT1G07520.2 | 27.481 | 393 | 247 | 9 | 173 | 546 | 155 | 528 | 9.76e-41 | 155 |
Msa0410780 | AT1G07520.4 | 27.481 | 393 | 247 | 9 | 173 | 546 | 155 | 528 | 9.76e-41 | 155 |
Msa0410780 | AT1G07520.3 | 27.481 | 393 | 247 | 9 | 173 | 546 | 320 | 693 | 2.06e-40 | 156 |
Msa0410780 | AT1G07520.1 | 27.481 | 393 | 247 | 9 | 173 | 546 | 319 | 692 | 2.08e-40 | 156 |
Msa0410780 | AT2G29060.2 | 29.231 | 390 | 240 | 11 | 173 | 546 | 285 | 654 | 7.80e-40 | 154 |
Msa0410780 | AT2G29060.1 | 29.231 | 390 | 240 | 11 | 173 | 546 | 322 | 691 | 8.78e-40 | 154 |
Msa0410780 | AT4G08250.1 | 28.337 | 487 | 295 | 19 | 86 | 546 | 18 | 476 | 3.87e-39 | 149 |
Msa0410780 | AT4G37650.1 | 27.820 | 399 | 248 | 7 | 173 | 547 | 147 | 529 | 5.22e-39 | 150 |
Msa0410780 | AT2G29065.1 | 27.665 | 394 | 246 | 7 | 173 | 546 | 253 | 627 | 7.15e-39 | 151 |
Msa0410780 | AT3G50650.1 | 32.584 | 356 | 204 | 11 | 206 | 547 | 209 | 542 | 1.50e-38 | 149 |
Msa0410780 | AT2G37650.1 | 28.244 | 393 | 249 | 9 | 167 | 547 | 342 | 713 | 6.32e-38 | 149 |
Msa0410780 | AT2G37650.2 | 28.244 | 393 | 249 | 9 | 167 | 547 | 330 | 701 | 6.40e-38 | 149 |
Msa0410780 | AT5G52510.1 | 28.608 | 395 | 243 | 9 | 171 | 547 | 267 | 640 | 5.38e-37 | 145 |
Msa0410780 | AT3G49950.1 | 26.448 | 397 | 249 | 10 | 173 | 546 | 31 | 407 | 1.28e-26 | 112 |
Msa0410780 | AT4G00150.1 | 26.716 | 408 | 246 | 14 | 147 | 547 | 193 | 554 | 1.68e-26 | 114 |
Msa0410780 | AT4G36710.1 | 24.874 | 398 | 254 | 11 | 166 | 548 | 119 | 486 | 4.48e-25 | 108 |
Msa0410780 | AT3G60630.1 | 30.745 | 322 | 182 | 14 | 238 | 547 | 330 | 622 | 5.14e-25 | 109 |
Msa0410780 | AT2G45160.1 | 27.401 | 354 | 217 | 10 | 206 | 547 | 314 | 639 | 4.57e-24 | 107 |
Msa0410780 | AT3G13840.1 | 24.450 | 409 | 252 | 13 | 161 | 547 | 137 | 510 | 9.82e-16 | 80.5 |
Find 136 sgRNAs with CRISPR-Local
Find 579 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGACCCTTTGGCTTCTT+TGG | 0.092684 | 3_2:+52580401 | Msa0410780:CDS |
GTTGATGTCGGAGATTTATT+TGG | 0.171636 | 3_2:+52587002 | Msa0410780:CDS |
TTGCTGGTGGTGATGGTTAT+AGG | 0.196762 | 3_2:+52587184 | Msa0410780:CDS |
TCGTCTTGTTCATACTTTAA+TGG | 0.200580 | 3_2:+52580650 | Msa0410780:CDS |
AGAGTTCATGTTATTGATTT+TGG | 0.230040 | 3_2:+52580951 | Msa0410780:CDS |
GATGAATCGATTGTTTCTTC+TGG | 0.269432 | 3_2:-52580822 | None:intergenic |
TGGGTTCGAACCGGTTCATT+TGG | 0.283884 | 3_2:+52587119 | Msa0410780:CDS |
TGCTGGTGGTGATGGTTATA+GGG | 0.290318 | 3_2:+52587185 | Msa0410780:CDS |
AATGACCCTTTGGCTTCTTT+GGG | 0.299832 | 3_2:+52580402 | Msa0410780:CDS |
ACTTTGTTAGCTTTGTTTGC+TGG | 0.304267 | 3_2:+52587168 | Msa0410780:CDS |
AATAATGGGTGTCTTATGTT+AGG | 0.308660 | 3_2:+52587216 | Msa0410780:CDS |
GGTCGGATCTCAAGCATATT+CGG | 0.315210 | 3_2:-52586700 | None:intergenic |
TATAGGGTTGAGGAAAATAA+TGG | 0.321686 | 3_2:+52587201 | Msa0410780:CDS |
GACATCGCCACCGCCGGTTC+TGG | 0.324530 | 3_2:-52580564 | None:intergenic |
ACCCAACCGATCTATATTCT+TGG | 0.326178 | 3_2:+52580334 | Msa0410780:CDS |
AGCAAGTGCTTGTGCGAAAT+AGG | 0.327440 | 3_2:-52580781 | None:intergenic |
AATTCTAACTTGAACTCAAC+CGG | 0.340285 | 3_2:+52586955 | Msa0410780:CDS |
TTCTCAAATCAATGACCCTT+TGG | 0.350334 | 3_2:+52580392 | Msa0410780:CDS |
TGAACAGCTTGAGATGGTTA+TGG | 0.351890 | 3_2:+52580257 | Msa0410780:CDS |
CGGTCTAGGATGGGTTCAGC+TGG | 0.354100 | 3_2:+52587099 | Msa0410780:CDS |
TTGATGTCGGAGATTTATTT+GGG | 0.362186 | 3_2:+52587003 | Msa0410780:CDS |
CGGGTTGGGTTCACCGAGTC+AGG | 0.367327 | 3_2:+52586975 | Msa0410780:CDS |
ATCAATAACATGAACTCTTC+CGG | 0.369829 | 3_2:-52580946 | None:intergenic |
GGGTTCGAACCGGTTCATTT+GGG | 0.373116 | 3_2:+52587120 | Msa0410780:CDS |
GAGAACTTTCTCAACTGAAC+CGG | 0.373578 | 3_2:-52586779 | None:intergenic |
AACTTGAACTCAACCGGGTT+GGG | 0.374159 | 3_2:+52586961 | Msa0410780:CDS |
CTTTGACTCAATGGCGGTCT+AGG | 0.374930 | 3_2:+52587085 | Msa0410780:CDS |
GAACAGCTTGAGATGGTTAT+GGG | 0.390884 | 3_2:+52580258 | Msa0410780:CDS |
ATGAATCGATTGTTTCTTCT+GGG | 0.391052 | 3_2:-52580821 | None:intergenic |
CTTGTTGATACACAAGAAAC+TGG | 0.397184 | 3_2:+52580624 | Msa0410780:CDS |
GGTGGGTATGCAGCCATTCC+AGG | 0.406758 | 3_2:-52580495 | None:intergenic |
TATGATCTTAGCGCTATTCC+TGG | 0.412789 | 3_2:+52580477 | Msa0410780:CDS |
TCATTGATTTGAGAAGAATC+AGG | 0.415906 | 3_2:-52580384 | None:intergenic |
GACTCAATGGCGGTCTAGGA+TGG | 0.416785 | 3_2:+52587089 | Msa0410780:CDS |
CTCGAAGCTTTCGCCGGTGC+CGG | 0.421518 | 3_2:+52580927 | Msa0410780:CDS |
GACTTGGTCTGAACCAGAAC+CGG | 0.426842 | 3_2:+52580551 | Msa0410780:CDS |
GACGAGTTGTTAGCAGCATT+AGG | 0.430561 | 3_2:+52580189 | Msa0410780:CDS |
GTCGGATCTCAAGCATATTC+GGG | 0.436067 | 3_2:-52586699 | None:intergenic |
CCCAACCGATCTATATTCTT+GGG | 0.437889 | 3_2:+52580335 | Msa0410780:CDS |
GAAGTGCATGTGAAGAATTT+CGG | 0.439144 | 3_2:-52580850 | None:intergenic |
TTATTAGCTTCATTACAAAC+TGG | 0.451250 | 3_2:+52580738 | Msa0410780:CDS |
GCTTTGTTTGCTGGTGGTGA+TGG | 0.452468 | 3_2:+52587177 | Msa0410780:CDS |
GTTAACAGCAACAGCTTCAC+CGG | 0.459180 | 3_2:-52586722 | None:intergenic |
CACTATGCACTACTATTGGC+TGG | 0.460527 | 3_2:+52586614 | Msa0410780:CDS |
GCATTTGAACCCAAATGAAC+CGG | 0.461370 | 3_2:-52587129 | None:intergenic |
AATGTAAAGCTTCAGTAAAC+CGG | 0.462320 | 3_2:-52586882 | None:intergenic |
TTTCTCAACTGAACCGGGTC+GGG | 0.464834 | 3_2:-52586773 | None:intergenic |
GCATCACTATGCACTACTAT+TGG | 0.467644 | 3_2:+52586610 | Msa0410780:CDS |
CACTCATTGCTACTTCTGCT+TGG | 0.477277 | 3_2:+52587253 | Msa0410780:CDS |
CAGCTAAGCGAATGAAGACT+TGG | 0.478448 | 3_2:+52580535 | Msa0410780:CDS |
AGTTTATTCGATTCGCTAGA+GGG | 0.479255 | 3_2:+52586913 | Msa0410780:CDS |
GGGTTCAGCTGGGTTCGAAC+CGG | 0.481901 | 3_2:+52587110 | Msa0410780:CDS |
CAAGCGCTGGCATTACGCCC+CGG | 0.482592 | 3_2:+52581008 | Msa0410780:CDS |
TCCTTCTTCACATGGCAAGT+TGG | 0.483071 | 3_2:+52586561 | Msa0410780:CDS |
GATGTCACCACCGGCGGTGG+TGG | 0.485090 | 3_2:+52580581 | Msa0410780:CDS |
GACATGAGACTTTGACTCAA+TGG | 0.488320 | 3_2:+52587076 | Msa0410780:CDS |
GGTGTTCAGTTCGAATTTCG+TGG | 0.488933 | 3_2:+52586646 | Msa0410780:CDS |
CATCATTGAAAGTGTTGTTG+AGG | 0.498758 | 3_2:-52580446 | None:intergenic |
GCCAGCGCTTATGCAAGCGC+TGG | 0.499517 | 3_2:+52580995 | Msa0410780:CDS |
GTTAGCAGCATTAGGTTACA+AGG | 0.501092 | 3_2:+52580197 | Msa0410780:CDS |
ACCCAAGAATATAGATCGGT+TGG | 0.502416 | 3_2:-52580336 | None:intergenic |
CAAGGTTCGTTCTTCAGACA+TGG | 0.505343 | 3_2:+52580215 | Msa0410780:CDS |
GGCGATGTCACCACCGGCGG+TGG | 0.505386 | 3_2:+52580578 | Msa0410780:CDS |
GCCAGCGCTTGCATAAGCGC+TGG | 0.505414 | 3_2:-52580996 | None:intergenic |
ATAATGGGTGTCTTATGTTA+GGG | 0.505618 | 3_2:+52587217 | Msa0410780:CDS |
AGAAACCAACGGTGGTGGAA+TGG | 0.507648 | 3_2:+52580167 | Msa0410780:CDS |
ATAGGGTTGAGGAAAATAAT+GGG | 0.509069 | 3_2:+52587202 | Msa0410780:CDS |
GCCAACTTGCCATGTGAAGA+AGG | 0.510287 | 3_2:-52586562 | None:intergenic |
TTATGTTAGGGTGGCATACA+AGG | 0.510723 | 3_2:+52587229 | Msa0410780:CDS |
AACATGAACTCTTCCGGCAC+CGG | 0.512483 | 3_2:-52580940 | None:intergenic |
GTCTTAAACAAGGGATGCAA+TGG | 0.515161 | 3_2:+52580973 | Msa0410780:CDS |
CGGAACGTAGGAGGACCGCC+GGG | 0.517761 | 3_2:-52581026 | None:intergenic |
GTAAACCGGTCTACGAAAAC+CGG | 0.519994 | 3_2:-52586868 | None:intergenic |
GAGTTTATTCGATTCGCTAG+AGG | 0.521091 | 3_2:+52586912 | Msa0410780:CDS |
GAAGAACCCAAAGAAGCCAA+AGG | 0.525943 | 3_2:-52580408 | None:intergenic |
TGGTGATGGTTATAGGGTTG+AGG | 0.526589 | 3_2:+52587191 | Msa0410780:CDS |
CCGGCGGTCCTCCTACGTTC+CGG | 0.526841 | 3_2:+52581027 | Msa0410780:CDS |
TAACTTGAACTCAACCGGGT+TGG | 0.530293 | 3_2:+52586960 | Msa0410780:CDS |
CATTGATTTGAGAAGAATCA+GGG | 0.530327 | 3_2:-52580383 | None:intergenic |
AGAACTTTCTCAACTGAACC+GGG | 0.532923 | 3_2:-52586778 | None:intergenic |
GTCTGAACCAGAACCGGCGG+TGG | 0.534665 | 3_2:+52580557 | Msa0410780:CDS |
ACTCAATGGCGGTCTAGGAT+GGG | 0.535484 | 3_2:+52587090 | Msa0410780:CDS |
GAACAGTATCAGAAGAAAGA+TGG | 0.536773 | 3_2:-52580305 | None:intergenic |
GGTGGTGACATCGCCACCGC+CGG | 0.537422 | 3_2:-52580570 | None:intergenic |
AGGGTTGAGTTCAGTGAGCA+TGG | 0.538956 | 3_2:-52580364 | None:intergenic |
GGCGGTGGCGATGTCACCAC+CGG | 0.541132 | 3_2:+52580572 | Msa0410780:CDS |
CCCAAGAATATAGATCGGTT+GGG | 0.541894 | 3_2:-52580335 | None:intergenic |
TTCGAACTGAACACCGTGTA+GGG | 0.542039 | 3_2:-52586638 | None:intergenic |
TGTAACGTGGTGGCTTATGA+AGG | 0.543460 | 3_2:+52587036 | Msa0410780:CDS |
TTTCTTCTTCCTTCTTCACA+TGG | 0.544753 | 3_2:+52586553 | Msa0410780:CDS |
TGGCTTATGAAGGAGTGGAC+CGG | 0.547664 | 3_2:+52587046 | Msa0410780:CDS |
GAACAAGAAGCGAATCATAA+CGG | 0.547991 | 3_2:+52586844 | Msa0410780:CDS |
CCGGAACGTAGGAGGACCGC+CGG | 0.550263 | 3_2:-52581027 | None:intergenic |
CATACTATGTTAGCCCGACC+CGG | 0.551742 | 3_2:+52586760 | Msa0410780:CDS |
ATGGGTAGTGCTCAAGAAGA+AGG | 0.552354 | 3_2:+52580276 | Msa0410780:CDS |
GTACCCTGAGTTAACTCACT+TGG | 0.552518 | 3_2:-52587295 | None:intergenic |
CTCGTCCATTCCACCACCGT+TGG | 0.556294 | 3_2:-52580172 | None:intergenic |
GGTCTAGGATGGGTTCAGCT+GGG | 0.557426 | 3_2:+52587100 | Msa0410780:CDS |
TTGTTAGCTTTGTTTGCTGG+TGG | 0.558150 | 3_2:+52587171 | Msa0410780:CDS |
GCTATTCTCGAAGCTTTCGC+CGG | 0.558838 | 3_2:+52580921 | Msa0410780:CDS |
CTTGTATTCTCCACCACCGC+CGG | 0.561471 | 3_2:-52580591 | None:intergenic |
GGCTTATGAAGGAGTGGACC+GGG | 0.562784 | 3_2:+52587047 | Msa0410780:CDS |
AAATGAGCGAATTTGAGATA+AGG | 0.566361 | 3_2:-52580885 | None:intergenic |
AAAGCTTGAACAGCTTGAGA+TGG | 0.568021 | 3_2:+52580251 | Msa0410780:CDS |
ATTTGTTTGTAACAGTATTG+CGG | 0.580712 | 3_2:+52586669 | Msa0410780:CDS |
CCGGTTAACCGGAACGTAGG+AGG | 0.584326 | 3_2:-52581035 | None:intergenic |
TCTTAGCGCTATTCCTGGAA+TGG | 0.585827 | 3_2:+52580482 | Msa0410780:CDS |
AAGAACCCAAAGAAGCCAAA+GGG | 0.586989 | 3_2:-52580407 | None:intergenic |
CTTTCTCAACTGAACCGGGT+CGG | 0.589796 | 3_2:-52586774 | None:intergenic |
GAGTCAGGATTTGTTGATGT+CGG | 0.593519 | 3_2:+52586990 | Msa0410780:CDS |
GCACTTGCTAGAAGAATCTA+CGG | 0.594505 | 3_2:+52580795 | Msa0410780:CDS |
CTGACTCGGTGAACCCAACC+CGG | 0.598687 | 3_2:-52586974 | None:intergenic |
GACATCAACAAATCCTGACT+CGG | 0.599006 | 3_2:-52586988 | None:intergenic |
GTATTCTCCACCACCGCCGG+TGG | 0.604682 | 3_2:-52580588 | None:intergenic |
ACTATTGGCTGGACCCTACA+CGG | 0.608358 | 3_2:+52586625 | Msa0410780:CDS |
TTGAACCCAAGAATATAGAT+CGG | 0.609769 | 3_2:-52580340 | None:intergenic |
ATTCTAACTTGAACTCAACC+GGG | 0.614255 | 3_2:+52586956 | Msa0410780:CDS |
ATTCGAACTGAACACCGTGT+AGG | 0.618442 | 3_2:-52586639 | None:intergenic |
TGTGTATCAACAAGAACCAC+CGG | 0.627324 | 3_2:-52580615 | None:intergenic |
CGTGGTGGCTTATGAAGGAG+TGG | 0.627503 | 3_2:+52587041 | Msa0410780:CDS |
AATATGCTTGAGATCCGACC+CGG | 0.629333 | 3_2:+52586703 | Msa0410780:CDS |
GCGCTGGCATTACGCCCCGG+CGG | 0.637073 | 3_2:+52581011 | Msa0410780:CDS |
AAGTCTCATGTCTTTCAACC+CGG | 0.637365 | 3_2:-52587065 | None:intergenic |
ATGGGTGTCTTATGTTAGGG+TGG | 0.639065 | 3_2:+52587220 | Msa0410780:CDS |
GGTGGTGGAGAATACAAGAC+CGG | 0.643290 | 3_2:+52580596 | Msa0410780:CDS |
CAGCAACAGCTTCACCGGGT+CGG | 0.649987 | 3_2:-52586717 | None:intergenic |
TTAACAGCAACAGCTTCACC+GGG | 0.654245 | 3_2:-52586721 | None:intergenic |
AGAAGCGAATCATAACGGAC+CGG | 0.675008 | 3_2:+52586849 | Msa0410780:CDS |
TTGGTCTGAACCAGAACCGG+CGG | 0.680584 | 3_2:+52580554 | Msa0410780:CDS |
GGTGGCGATGTCACCACCGG+CGG | 0.684333 | 3_2:+52580575 | Msa0410780:CDS |
ATGCCGGTTAACCGGAACGT+AGG | 0.689075 | 3_2:-52581038 | None:intergenic |
ATGAGACTTTGACTCAATGG+CGG | 0.698553 | 3_2:+52587079 | Msa0410780:CDS |
GGTGGAGAATACAAGACCGG+TGG | 0.704648 | 3_2:+52580599 | Msa0410780:CDS |
TAGACAGATATGTAACGTGG+TGG | 0.715009 | 3_2:+52587026 | Msa0410780:CDS |
GGAACGTAGGAGGACCGCCG+GGG | 0.728118 | 3_2:-52581025 | None:intergenic |
GGGTAGACAGATATGTAACG+TGG | 0.750257 | 3_2:+52587023 | Msa0410780:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCTCCACTATAATAATAA+TGG | + | chr3_2:52581289-52581308 | Msa0410780:intron | 20.0% |
!! | ATCTCCACTATAATAATAAT+GGG | + | chr3_2:52581290-52581309 | Msa0410780:intron | 20.0% |
!! | TATTCCCATTATTATTATAG+TGG | - | chr3_2:52581297-52581316 | None:intergenic | 20.0% |
!! | AATCTCCACTATAATAATAA+TGG | + | chr3_2:52581289-52581308 | Msa0410780:intron | 20.0% |
!! | ATCTCCACTATAATAATAAT+GGG | + | chr3_2:52581290-52581309 | Msa0410780:intron | 20.0% |
!! | TATTCCCATTATTATTATAG+TGG | - | chr3_2:52581297-52581316 | None:intergenic | 20.0% |
!! | TTATTAGCTTCATTACAAAC+TGG | + | chr3_2:52580738-52580757 | Msa0410780:CDS | 25.0% |
!!! | AGAGTTCATGTTATTGATTT+TGG | + | chr3_2:52580951-52580970 | Msa0410780:CDS | 25.0% |
!!! | ATTGATTTTGGTCTTAAACA+AGG | + | chr3_2:52580963-52580982 | Msa0410780:CDS | 25.0% |
!!! | TTGATTTTGGTCTTAAACAA+GGG | + | chr3_2:52580964-52580983 | Msa0410780:CDS | 25.0% |
!! | TATTATAGTGGAGATTTAAG+AGG | - | chr3_2:52581285-52581304 | None:intergenic | 25.0% |
!! | AAACTATCCTTTGATTAGTT+TGG | + | chr3_2:52581739-52581758 | Msa0410780:intron | 25.0% |
!!! | AACTATCCTTTGATTAGTTT+GGG | + | chr3_2:52581740-52581759 | Msa0410780:intron | 25.0% |
! | AAAATTCATACCAATGACAA+TGG | - | chr3_2:52581841-52581860 | None:intergenic | 25.0% |
!!! | ATATTTGATTACTTTTGCAG+GGG | - | chr3_2:52582142-52582161 | None:intergenic | 25.0% |
!!! | GATATTTGATTACTTTTGCA+GGG | - | chr3_2:52582143-52582162 | None:intergenic | 25.0% |
! | TGCAAAAGTAATCAAATATC+CGG | + | chr3_2:52582143-52582162 | Msa0410780:intron | 25.0% |
!! | AACATACAACAAAAGTATGA+TGG | + | chr3_2:52582719-52582738 | Msa0410780:intron | 25.0% |
! | TTTGTGAAGAACTATGAAAA+TGG | - | chr3_2:52582750-52582769 | None:intergenic | 25.0% |
!!! | TTTTGAAGAAATATTCTCAC+CGG | - | chr3_2:52583057-52583076 | None:intergenic | 25.0% |
! | TGAATATGTAAATTTCACTG+AGG | - | chr3_2:52583327-52583346 | None:intergenic | 25.0% |
!! | AAAACTTCCCAAATCATTTT+GGG | - | chr3_2:52583912-52583931 | None:intergenic | 25.0% |
! | AAATGTTTAAGAACAGACAA+TGG | - | chr3_2:52584085-52584104 | None:intergenic | 25.0% |
! | TTCTTCTCATCATATCAAAA+AGG | - | chr3_2:52584787-52584806 | None:intergenic | 25.0% |
!! | AAACTAAGTTGTTATTACTG+TGG | - | chr3_2:52585048-52585067 | None:intergenic | 25.0% |
!! | AACTTCGATCAATGTATTTT+CGG | + | chr3_2:52585538-52585557 | Msa0410780:intron | 25.0% |
!! | AAGAAATATCTTTTCTGATG+TGG | + | chr3_2:52585952-52585971 | Msa0410780:intron | 25.0% |
!! | TATTATAGTGGAGATTTAAG+AGG | - | chr3_2:52581285-52581304 | None:intergenic | 25.0% |
! | ATTTGTTTGTAACAGTATTG+CGG | + | chr3_2:52586669-52586688 | Msa0410780:CDS | 25.0% |
AGAGAAGAAAAAGAAACCAA+CGG | + | chr3_2:52580156-52580175 | Msa0410780:CDS | 30.0% | |
TTGAACCCAAGAATATAGAT+CGG | - | chr3_2:52580343-52580362 | None:intergenic | 30.0% | |
!! | CATTGATTTGAGAAGAATCA+GGG | - | chr3_2:52580386-52580405 | None:intergenic | 30.0% |
!! | TCATTGATTTGAGAAGAATC+AGG | - | chr3_2:52580387-52580406 | None:intergenic | 30.0% |
! | TTATGTTTTCTTCTTGAGGT+GGG | - | chr3_2:52580515-52580534 | None:intergenic | 30.0% |
! | TCGTCTTGTTCATACTTTAA+TGG | + | chr3_2:52580650-52580669 | Msa0410780:CDS | 30.0% |
! | ATGAATCGATTGTTTCTTCT+GGG | - | chr3_2:52580824-52580843 | None:intergenic | 30.0% |
! | AAATGAGCGAATTTGAGATA+AGG | - | chr3_2:52580888-52580907 | None:intergenic | 30.0% |
ATCAATAACATGAACTCTTC+CGG | - | chr3_2:52580949-52580968 | None:intergenic | 30.0% | |
TTTACTTACTCACATTGAGA+AGG | - | chr3_2:52581244-52581263 | None:intergenic | 30.0% | |
ATGTGAGTAAGTAAAAACCA+CGG | + | chr3_2:52581249-52581268 | Msa0410780:intron | 30.0% | |
TAGATACAACTCTCACAAAT+TGG | + | chr3_2:52581361-52581380 | Msa0410780:intron | 30.0% | |
! | ATCAAAGGATAGTTTCCTTT+TGG | - | chr3_2:52581734-52581753 | None:intergenic | 30.0% |
!! | ACTATCCTTTGATTAGTTTG+GGG | + | chr3_2:52581741-52581760 | Msa0410780:intron | 30.0% |
! | CAAAACTCTATCTTCTCTTT+TGG | + | chr3_2:52581790-52581809 | Msa0410780:intron | 30.0% |
GAACATAACTTTCTTGATTC+TGG | + | chr3_2:52581989-52582008 | Msa0410780:intron | 30.0% | |
!! | TATTTGATTACTTTTGCAGG+GGG | - | chr3_2:52582141-52582160 | None:intergenic | 30.0% |
!! | GGATATTTGATTACTTTTGC+AGG | - | chr3_2:52582144-52582163 | None:intergenic | 30.0% |
! | TTTTCTTGAATCTACATCTC+CGG | + | chr3_2:52582173-52582192 | Msa0410780:intron | 30.0% |
ATCTCAAGAAAGTTCTTGAA+AGG | - | chr3_2:52582533-52582552 | None:intergenic | 30.0% | |
!! | TCTTTTGCTATGAAGGATTT+GGG | - | chr3_2:52582633-52582652 | None:intergenic | 30.0% |
!! | ATCTTTTGCTATGAAGGATT+TGG | - | chr3_2:52582634-52582653 | None:intergenic | 30.0% |
GTTAAAACAGCATTCTTACA+TGG | - | chr3_2:52582960-52582979 | None:intergenic | 30.0% | |
! | AATCAATGCCTTTCTTTTGA+TGG | + | chr3_2:52583075-52583094 | Msa0410780:intron | 30.0% |
AAAATTACCAGATGGAAAGA+GGG | - | chr3_2:52583189-52583208 | None:intergenic | 30.0% | |
TAAAATTACCAGATGGAAAG+AGG | - | chr3_2:52583190-52583209 | None:intergenic | 30.0% | |
AGACAACCAATAAGGAAAAA+TGG | - | chr3_2:52583271-52583290 | None:intergenic | 30.0% | |
TATGTAAATTTCACTGAGGA+AGG | - | chr3_2:52583323-52583342 | None:intergenic | 30.0% | |
!!! | CTTCATGTATTGGTTGATTT+TGG | + | chr3_2:52583459-52583478 | Msa0410780:intron | 30.0% |
TCACGATCATAATTCATTTG+AGG | + | chr3_2:52583527-52583546 | Msa0410780:intron | 30.0% | |
TATTGTGGTAAACAATTCAG+GGG | - | chr3_2:52583561-52583580 | None:intergenic | 30.0% | |
CTATTGTGGTAAACAATTCA+GGG | - | chr3_2:52583562-52583581 | None:intergenic | 30.0% | |
ACTATTGTGGTAAACAATTC+AGG | - | chr3_2:52583563-52583582 | None:intergenic | 30.0% | |
TTGTTTACCACAATAGTCTT+TGG | + | chr3_2:52583566-52583585 | Msa0410780:intron | 30.0% | |
!! | TGAACTTGGCTTTAGATTAT+GGG | - | chr3_2:52583675-52583694 | None:intergenic | 30.0% |
!! | ATGAACTTGGCTTTAGATTA+TGG | - | chr3_2:52583676-52583695 | None:intergenic | 30.0% |
! | AAACTTCCCAAATCATTTTG+GGG | - | chr3_2:52583911-52583930 | None:intergenic | 30.0% |
! | CAAAACTTCCCAAATCATTT+TGG | - | chr3_2:52583913-52583932 | None:intergenic | 30.0% |
TATTCCATGAGATCTACAAT+AGG | + | chr3_2:52584033-52584052 | Msa0410780:intron | 30.0% | |
!! | CAGAGTATCTTTTCAAAGAT+CGG | - | chr3_2:52584323-52584342 | None:intergenic | 30.0% |
AATCATCTTCCAAACATCAA+GGG | - | chr3_2:52584391-52584410 | None:intergenic | 30.0% | |
GTTGGTATGATAAACCAATT+TGG | - | chr3_2:52584601-52584620 | None:intergenic | 30.0% | |
TCATATCAAAAAGGAGACTT+TGG | - | chr3_2:52584778-52584797 | None:intergenic | 30.0% | |
ATGAGAAGAATTCTTCATGA+GGG | + | chr3_2:52584797-52584816 | Msa0410780:intron | 30.0% | |
TTCTTTGGATCGATTATATC+AGG | + | chr3_2:52584955-52584974 | Msa0410780:intron | 30.0% | |
CTGATTTACAATACCTTTGA+AGG | + | chr3_2:52585356-52585375 | Msa0410780:intron | 30.0% | |
! | TTTTCTCGGGTTTATCTTTT+TGG | + | chr3_2:52585610-52585629 | Msa0410780:intron | 30.0% |
! | TTTCTCGGGTTTATCTTTTT+GGG | + | chr3_2:52585611-52585630 | Msa0410780:intron | 30.0% |
TAGTGATATATTGCATGTCT+AGG | - | chr3_2:52585911-52585930 | None:intergenic | 30.0% | |
ATAATTCTTAGTATGCTCTG+TGG | - | chr3_2:52585998-52586017 | None:intergenic | 30.0% | |
TTTACTTACTCACATTGAGA+AGG | - | chr3_2:52581244-52581263 | None:intergenic | 30.0% | |
ATGTGAGTAAGTAAAAACCA+CGG | + | chr3_2:52581249-52581268 | Msa0410780:intron | 30.0% | |
TAGATACAACTCTCACAAAT+TGG | + | chr3_2:52581361-52581380 | Msa0410780:intron | 30.0% | |
! | CAACGATTGTTACGATTTTA+GGG | - | chr3_2:52586825-52586844 | None:intergenic | 30.0% |
! | TCAACGATTGTTACGATTTT+AGG | - | chr3_2:52586826-52586845 | None:intergenic | 30.0% |
AATGTAAAGCTTCAGTAAAC+CGG | - | chr3_2:52586885-52586904 | None:intergenic | 30.0% | |
AATTCTAACTTGAACTCAAC+CGG | + | chr3_2:52586955-52586974 | Msa0410780:CDS | 30.0% | |
TTGATGTCGGAGATTTATTT+GGG | + | chr3_2:52587003-52587022 | Msa0410780:CDS | 30.0% | |
TATAGGGTTGAGGAAAATAA+TGG | + | chr3_2:52587201-52587220 | Msa0410780:CDS | 30.0% | |
ATAGGGTTGAGGAAAATAAT+GGG | + | chr3_2:52587202-52587221 | Msa0410780:CDS | 30.0% | |
!! | AATAATGGGTGTCTTATGTT+AGG | + | chr3_2:52587216-52587235 | Msa0410780:CDS | 30.0% |
!! | ATAATGGGTGTCTTATGTTA+GGG | + | chr3_2:52587217-52587236 | Msa0410780:CDS | 30.0% |
GAACAGTATCAGAAGAAAGA+TGG | - | chr3_2:52580308-52580327 | None:intergenic | 35.0% | |
TTCTCAAATCAATGACCCTT+TGG | + | chr3_2:52580392-52580411 | Msa0410780:CDS | 35.0% | |
!! | CATCATTGAAAGTGTTGTTG+AGG | - | chr3_2:52580449-52580468 | None:intergenic | 35.0% |
! | GTTATGTTTTCTTCTTGAGG+TGG | - | chr3_2:52580516-52580535 | None:intergenic | 35.0% |
! | GCTGTTATGTTTTCTTCTTG+AGG | - | chr3_2:52580519-52580538 | None:intergenic | 35.0% |
CTTGTTGATACACAAGAAAC+TGG | + | chr3_2:52580624-52580643 | Msa0410780:CDS | 35.0% | |
! | GATGAATCGATTGTTTCTTC+TGG | - | chr3_2:52580825-52580844 | None:intergenic | 35.0% |
GAAGTGCATGTGAAGAATTT+CGG | - | chr3_2:52580853-52580872 | None:intergenic | 35.0% | |
!!! | AAGTGCCTATTTTGAGTTCA+CGG | - | chr3_2:52581175-52581194 | None:intergenic | 35.0% |
ACTCAAAATAGGCACTTTAG+CGG | + | chr3_2:52581178-52581197 | Msa0410780:intron | 35.0% | |
TGTGAGTAAGTAAAAACCAC+GGG | + | chr3_2:52581250-52581269 | Msa0410780:intron | 35.0% | |
! | TTTTCTCTCACACTCTTATG+AGG | + | chr3_2:52581394-52581413 | Msa0410780:intron | 35.0% |
!! | TACCGTGTGCTATTTATAGA+AGG | + | chr3_2:52581528-52581547 | Msa0410780:intron | 35.0% |
!! | ACCGTGTGCTATTTATAGAA+GGG | + | chr3_2:52581529-52581548 | Msa0410780:intron | 35.0% |
TCCCTTCTATAAATAGCACA+CGG | - | chr3_2:52581533-52581552 | None:intergenic | 35.0% | |
TTTCTTCTTCCTTCTTCACA+TGG | + | chr3_2:52581624-52581643 | Msa0410780:intron | 35.0% | |
AGAATTCGACATACCATTCA+AGG | - | chr3_2:52581933-52581952 | None:intergenic | 35.0% | |
AGTAATCAAATATCCGGATG+TGG | + | chr3_2:52582149-52582168 | Msa0410780:intron | 35.0% | |
GATTCAAGAAAATCCACATC+CGG | - | chr3_2:52582165-52582184 | None:intergenic | 35.0% | |
!!! | AAGTGCTTATGTTTTGGCAA+TGG | - | chr3_2:52582237-52582256 | None:intergenic | 35.0% |
! | GCCAAAACATAAGCACTTTT+TGG | + | chr3_2:52582239-52582258 | Msa0410780:intron | 35.0% |
!!! | GCCAAAAAGTGCTTATGTTT+TGG | - | chr3_2:52582243-52582262 | None:intergenic | 35.0% |
! | TGGATACTGAGGTATCTAAA+AGG | - | chr3_2:52582270-52582289 | None:intergenic | 35.0% |
TTACTGAGTTTCATATGACC+AGG | + | chr3_2:52582468-52582487 | Msa0410780:intron | 35.0% | |
ATCGTTCAAAAAGAATGCTG+TGG | - | chr3_2:52582572-52582591 | None:intergenic | 35.0% | |
!! | GAGCAAATCTTTTGCTATGA+AGG | - | chr3_2:52582640-52582659 | None:intergenic | 35.0% |
GCTTATCGTTGGAAAAGATA+AGG | - | chr3_2:52582691-52582710 | None:intergenic | 35.0% | |
!! | GTTGATGATATGCTTATCGT+TGG | - | chr3_2:52582702-52582721 | None:intergenic | 35.0% |
AACTTCTTGTACCATTGTCT+TGG | + | chr3_2:52582825-52582844 | Msa0410780:intron | 35.0% | |
CGCTTGAAGAAAAGTCTATA+CGG | - | chr3_2:52582864-52582883 | None:intergenic | 35.0% | |
CCTAGAGGAAGAAATCTATA+TGG | - | chr3_2:52582934-52582953 | None:intergenic | 35.0% | |
CCATATAGATTTCTTCCTCT+AGG | + | chr3_2:52582931-52582950 | Msa0410780:intron | 35.0% | |
ACAATTCGTGCTTTGTATCT+GGG | + | chr3_2:52583110-52583129 | Msa0410780:intron | 35.0% | |
!! | GAGGGCATTGAAAAATAAGT+GGG | - | chr3_2:52583171-52583190 | None:intergenic | 35.0% |
!! | AGAGGGCATTGAAAAATAAG+TGG | - | chr3_2:52583172-52583191 | None:intergenic | 35.0% |
! | TTCCATCTGGTAATTTTACC+AGG | + | chr3_2:52583192-52583211 | Msa0410780:intron | 35.0% |
CCAATAAGGAAAAATGGTTG+CGG | - | chr3_2:52583265-52583284 | None:intergenic | 35.0% | |
! | TTCCTTATTGGTTGTCTCTA+TGG | + | chr3_2:52583274-52583293 | Msa0410780:intron | 35.0% |
CCATCAAAAAGATACTTCTC+AGG | - | chr3_2:52583350-52583369 | None:intergenic | 35.0% | |
!!! | CCTGAGAAGTATCTTTTTGA+TGG | + | chr3_2:52583347-52583366 | Msa0410780:intron | 35.0% |
! | GATGATGATGATGTTGAGAT+GGG | - | chr3_2:52583413-52583432 | None:intergenic | 35.0% |
! | TGATGATGATGATGTTGAGA+TGG | - | chr3_2:52583414-52583433 | None:intergenic | 35.0% |
ACCAATACATGAAGAACAGA+GGG | - | chr3_2:52583453-52583472 | None:intergenic | 35.0% | |
AACCAATACATGAAGAACAG+AGG | - | chr3_2:52583454-52583473 | None:intergenic | 35.0% | |
!! | TGATTTTGGTCTATCTGATC+AGG | + | chr3_2:52583473-52583492 | Msa0410780:intron | 35.0% |
ATTGTGGTAAACAATTCAGG+GGG | - | chr3_2:52583560-52583579 | None:intergenic | 35.0% | |
TAAGAAGCCAAAGACTATTG+TGG | - | chr3_2:52583576-52583595 | None:intergenic | 35.0% | |
! | CTAAAGCCAAGTTCATCTTT+TGG | + | chr3_2:52583680-52583699 | Msa0410780:intron | 35.0% |
AAAGCTAGATGCTAAGATGA+AGG | - | chr3_2:52583726-52583745 | None:intergenic | 35.0% | |
! | AGCTTTGCTCTTTCATCTTT+TGG | + | chr3_2:52583740-52583759 | Msa0410780:intron | 35.0% |
TTTCCATACCATACTTCATC+TGG | + | chr3_2:52583818-52583837 | Msa0410780:intron | 35.0% | |
ATACCAGATGAAGTATGGTA+TGG | - | chr3_2:52583824-52583843 | None:intergenic | 35.0% | |
TCTGGTATCTCTCCATTTAA+AGG | + | chr3_2:52583836-52583855 | Msa0410780:intron | 35.0% | |
TCTCCATTTAAAGGTCTTGA+AGG | + | chr3_2:52583845-52583864 | Msa0410780:intron | 35.0% | |
TCTCCTTCAAGACCTTTAAA+TGG | - | chr3_2:52583851-52583870 | None:intergenic | 35.0% | |
TGACTTTCTCTACAATCGTT+CGG | + | chr3_2:52583951-52583970 | Msa0410780:intron | 35.0% | |
ATCTACAATAGGCTGCAAAT+GGG | + | chr3_2:52584044-52584063 | Msa0410780:intron | 35.0% | |
TGTTTAAGAACAGACAATGG+TGG | - | chr3_2:52584082-52584101 | None:intergenic | 35.0% | |
ACTTGATCTTTCGTCTTCAA+TGG | + | chr3_2:52584163-52584182 | Msa0410780:intron | 35.0% | |
! | CGATCACTCTAGAAAAGTAT+GGG | - | chr3_2:52584194-52584213 | None:intergenic | 35.0% |
! | ACGATCACTCTAGAAAAGTA+TGG | - | chr3_2:52584195-52584214 | None:intergenic | 35.0% |
AAAATGTTGTGAACCACCAA+GGG | + | chr3_2:52584228-52584247 | Msa0410780:intron | 35.0% | |
ATGTTTGCTCTACATCTGAA+AGG | - | chr3_2:52584255-52584274 | None:intergenic | 35.0% | |
CATCTGAATGAACAAGATCT+AGG | + | chr3_2:52584272-52584291 | Msa0410780:intron | 35.0% | |
GAATCATCTTCCAAACATCA+AGG | - | chr3_2:52584392-52584411 | None:intergenic | 35.0% | |
ATGCAGGGAAAGATAAACAA+GGG | - | chr3_2:52584505-52584524 | None:intergenic | 35.0% | |
TATGCAGGGAAAGATAAACA+AGG | - | chr3_2:52584506-52584525 | None:intergenic | 35.0% | |
! | ATGATAAACCAATTTGGAGC+TGG | - | chr3_2:52584595-52584614 | None:intergenic | 35.0% |
ACAGGAAAGTTAGATGATGT+TGG | - | chr3_2:52584619-52584638 | None:intergenic | 35.0% | |
TCAAAAAGGAGACTTTGGTA+TGG | - | chr3_2:52584773-52584792 | None:intergenic | 35.0% | |
GATGAGAAGAATTCTTCATG+AGG | + | chr3_2:52584796-52584815 | Msa0410780:intron | 35.0% | |
TGAGAAGAATTCTTCATGAG+GGG | + | chr3_2:52584798-52584817 | Msa0410780:intron | 35.0% | |
! | TGCATTTGGATAATTGACTC+AGG | - | chr3_2:52584841-52584860 | None:intergenic | 35.0% |
AACGACAAAGAAATTCTCGT+TGG | + | chr3_2:52584897-52584916 | Msa0410780:intron | 35.0% | |
GTTCCATCTTCTTTCTTCTT+TGG | + | chr3_2:52584940-52584959 | Msa0410780:intron | 35.0% | |
GATCCAAAGAAGAAAGAAGA+TGG | - | chr3_2:52584946-52584965 | None:intergenic | 35.0% | |
TTGGATCGATTATATCAGGA+TGG | + | chr3_2:52584959-52584978 | Msa0410780:intron | 35.0% | |
ATCTGCACTCAAACTTTCTA+TGG | + | chr3_2:52585013-52585032 | Msa0410780:intron | 35.0% | |
TGTTATTACTGTGGCAAACT+GGG | - | chr3_2:52585039-52585058 | None:intergenic | 35.0% | |
! | TTGTTATTACTGTGGCAAAC+TGG | - | chr3_2:52585040-52585059 | None:intergenic | 35.0% |
GAGCATCTAAATACCTTCAA+AGG | - | chr3_2:52585372-52585391 | None:intergenic | 35.0% | |
!! | AACAAGGTGTGCTTTATTTC+TGG | + | chr3_2:52585437-52585456 | Msa0410780:intron | 35.0% |
!! | ACAAGGTGTGCTTTATTTCT+GGG | + | chr3_2:52585438-52585457 | Msa0410780:intron | 35.0% |
ATACCAATGCGTATGAGTTA+TGG | - | chr3_2:52585497-52585516 | None:intergenic | 35.0% | |
!!! | GGTTTATCTTTTTGGGTGAT+TGG | + | chr3_2:52585618-52585637 | Msa0410780:intron | 35.0% |
TGGTGATATGTTCAAGCTAA+CGG | - | chr3_2:52585709-52585728 | None:intergenic | 35.0% | |
ATTTCCTGTGTAACTCAAGA+TGG | - | chr3_2:52585751-52585770 | None:intergenic | 35.0% | |
TTGTCGCTAGATATAAAGTG+AGG | - | chr3_2:52585934-52585953 | None:intergenic | 35.0% | |
!!! | AAGTGCCTATTTTGAGTTCA+CGG | - | chr3_2:52581175-52581194 | None:intergenic | 35.0% |
ACTCAAAATAGGCACTTTAG+CGG | + | chr3_2:52581178-52581197 | Msa0410780:intron | 35.0% | |
TGTGAGTAAGTAAAAACCAC+GGG | + | chr3_2:52581250-52581269 | Msa0410780:intron | 35.0% | |
! | TTTTCTCTCACACTCTTATG+AGG | + | chr3_2:52581394-52581413 | Msa0410780:intron | 35.0% |
!! | TACCGTGTGCTATTTATAGA+AGG | + | chr3_2:52581528-52581547 | Msa0410780:intron | 35.0% |
!! | ACCGTGTGCTATTTATAGAA+GGG | + | chr3_2:52581529-52581548 | Msa0410780:intron | 35.0% |
TCCCTTCTATAAATAGCACA+CGG | - | chr3_2:52581533-52581552 | None:intergenic | 35.0% | |
TTTCTTCTTCCTTCTTCACA+TGG | + | chr3_2:52581624-52581643 | Msa0410780:intron | 35.0% | |
GAACAAGAAGCGAATCATAA+CGG | + | chr3_2:52586844-52586863 | Msa0410780:CDS | 35.0% | |
! | AGTTTATTCGATTCGCTAGA+GGG | + | chr3_2:52586913-52586932 | Msa0410780:CDS | 35.0% |
ATTCTAACTTGAACTCAACC+GGG | + | chr3_2:52586956-52586975 | Msa0410780:CDS | 35.0% | |
GTTGATGTCGGAGATTTATT+TGG | + | chr3_2:52587002-52587021 | Msa0410780:CDS | 35.0% | |
!! | ACTTTGTTAGCTTTGTTTGC+TGG | + | chr3_2:52587168-52587187 | Msa0410780:CDS | 35.0% |
GAAGAAAAAGAAACCAACGG+TGG | + | chr3_2:52580159-52580178 | Msa0410780:CDS | 40.0% | |
GTTAGCAGCATTAGGTTACA+AGG | + | chr3_2:52580197-52580216 | Msa0410780:CDS | 40.0% | |
AAAGCTTGAACAGCTTGAGA+TGG | + | chr3_2:52580251-52580270 | Msa0410780:CDS | 40.0% | |
TGAACAGCTTGAGATGGTTA+TGG | + | chr3_2:52580257-52580276 | Msa0410780:CDS | 40.0% | |
GAACAGCTTGAGATGGTTAT+GGG | + | chr3_2:52580258-52580277 | Msa0410780:CDS | 40.0% | |
ACCCAACCGATCTATATTCT+TGG | + | chr3_2:52580334-52580353 | Msa0410780:CDS | 40.0% | |
CCCAAGAATATAGATCGGTT+GGG | - | chr3_2:52580338-52580357 | None:intergenic | 40.0% | |
CCCAACCGATCTATATTCTT+GGG | + | chr3_2:52580335-52580354 | Msa0410780:CDS | 40.0% | |
ACCCAAGAATATAGATCGGT+TGG | - | chr3_2:52580339-52580358 | None:intergenic | 40.0% | |
! | AATGACCCTTTGGCTTCTTT+GGG | + | chr3_2:52580402-52580421 | Msa0410780:CDS | 40.0% |
AAGAACCCAAAGAAGCCAAA+GGG | - | chr3_2:52580410-52580429 | None:intergenic | 40.0% | |
TATGATCTTAGCGCTATTCC+TGG | + | chr3_2:52580477-52580496 | Msa0410780:CDS | 40.0% | |
TGTGTATCAACAAGAACCAC+CGG | - | chr3_2:52580618-52580637 | None:intergenic | 40.0% | |
! | GCACTTGCTAGAAGAATCTA+CGG | + | chr3_2:52580795-52580814 | Msa0410780:CDS | 40.0% |
GTCTTAAACAAGGGATGCAA+TGG | + | chr3_2:52580973-52580992 | Msa0410780:CDS | 40.0% | |
!!! | TATTTTGAGTTCACGGAGGA+GGG | - | chr3_2:52581168-52581187 | None:intergenic | 40.0% |
!!! | CACACAACAAGTTTTTAGCG+TGG | + | chr3_2:52581214-52581233 | Msa0410780:intron | 40.0% |
GAATACAAATCTTCACCCTC+AGG | + | chr3_2:52581312-52581331 | Msa0410780:intron | 40.0% | |
ACATAGTTATGTCCACCTGA+GGG | - | chr3_2:52581330-52581349 | None:intergenic | 40.0% | |
TACATAGTTATGTCCACCTG+AGG | - | chr3_2:52581331-52581350 | None:intergenic | 40.0% | |
TTCTCTCAACTCTATGAGTG+AGG | + | chr3_2:52581430-52581449 | Msa0410780:intron | 40.0% | |
GTGAGTGCACAAATTTGTGA+AGG | - | chr3_2:52581569-52581588 | None:intergenic | 40.0% | |
GCATCACTATGCACTACTAT+TGG | + | chr3_2:52581681-52581700 | Msa0410780:intron | 40.0% | |
!! | ATAGTTTCCTTTTGGCTGGA+GGG | - | chr3_2:52581726-52581745 | None:intergenic | 40.0% |
! | AAGGATAGTTTCCTTTTGGC+TGG | - | chr3_2:52581730-52581749 | None:intergenic | 40.0% |
!! | ATCCTTTGATTAGTTTGGGG+TGG | + | chr3_2:52581744-52581763 | Msa0410780:intron | 40.0% |
!! | GAGTTTTGTAAAGAAGCTGC+AGG | - | chr3_2:52581778-52581797 | None:intergenic | 40.0% |
CATATCTGCTCCATTGTCAT+TGG | + | chr3_2:52581828-52581847 | Msa0410780:intron | 40.0% | |
TCATTGGATACGTGATGTGT+TGG | - | chr3_2:52581887-52581906 | None:intergenic | 40.0% | |
! | ACATCGATGTGAGGTATCAT+TGG | - | chr3_2:52581903-52581922 | None:intergenic | 40.0% |
!!! | CGATGTGTTTTGACCTTGAA+TGG | + | chr3_2:52581917-52581936 | Msa0410780:intron | 40.0% |
AAGAAGTTCCTGCAAGAGTT+AGG | - | chr3_2:52582015-52582034 | None:intergenic | 40.0% | |
AAGTACATCGCAATCACTGA+AGG | - | chr3_2:52582060-52582079 | None:intergenic | 40.0% | |
TGGTTACGTAGATGCTGATA+TGG | - | chr3_2:52582199-52582218 | None:intergenic | 40.0% | |
AATGGAAATCAAATGCTCGC+TGG | - | chr3_2:52582219-52582238 | None:intergenic | 40.0% | |
! | GTTCTTTTCCTGGGTTTGAT+AGG | + | chr3_2:52582307-52582326 | Msa0410780:intron | 40.0% |
AGTAGATTCCTATCAAACCC+AGG | - | chr3_2:52582318-52582337 | None:intergenic | 40.0% | |
AGAGAAAGAAGAGATGAGCA+AGG | - | chr3_2:52582424-52582443 | None:intergenic | 40.0% | |
TGCTCATCTCTTCTTTCTCT+TGG | + | chr3_2:52582424-52582443 | Msa0410780:intron | 40.0% | |
TCTTTCTCTTGGTCATTCTC+AGG | + | chr3_2:52582435-52582454 | Msa0410780:intron | 40.0% | |
AGTTTCATATGACCAGGTAG+CGG | + | chr3_2:52582474-52582493 | Msa0410780:intron | 40.0% | |
AGTTCTTCACAAACACGCAA+TGG | + | chr3_2:52582757-52582776 | Msa0410780:intron | 40.0% | |
ACGTCTTTGTGAAGTTGTGT+TGG | + | chr3_2:52582787-52582806 | Msa0410780:intron | 40.0% | |
CGTCTTTGTGAAGTTGTGTT+GGG | + | chr3_2:52582788-52582807 | Msa0410780:intron | 40.0% | |
AAGTCTATACGGCTTAAAGC+AGG | - | chr3_2:52582853-52582872 | None:intergenic | 40.0% | |
! | TTTTCTTCAAGCGACACACA+AGG | + | chr3_2:52582871-52582890 | Msa0410780:intron | 40.0% |
ATCTATATGGAGCAACCTGA+AGG | - | chr3_2:52582921-52582940 | None:intergenic | 40.0% | |
ATTCTTACATGGAGACCTAG+AGG | - | chr3_2:52582949-52582968 | None:intergenic | 40.0% | |
TAGACCAAGGATTGCTCTAA+TGG | + | chr3_2:52583016-52583035 | Msa0410780:intron | 40.0% | |
ACATCCATTAGAGCAATCCT+TGG | - | chr3_2:52583023-52583042 | None:intergenic | 40.0% | |
TGAAGAAATATTCTCACCGG+TGG | - | chr3_2:52583054-52583073 | None:intergenic | 40.0% | |
AAAGCACGAATTGTCGTGAA+GGG | - | chr3_2:52583104-52583123 | None:intergenic | 40.0% | |
GACAATTCGTGCTTTGTATC+TGG | + | chr3_2:52583109-52583128 | Msa0410780:intron | 40.0% | |
CAATTCGTGCTTTGTATCTG+GGG | + | chr3_2:52583111-52583130 | Msa0410780:intron | 40.0% | |
GACCTGGTAAAATTACCAGA+TGG | - | chr3_2:52583197-52583216 | None:intergenic | 40.0% | |
AGAAGAGATGCAGTCTCTAA+AGG | - | chr3_2:52583234-52583253 | None:intergenic | 40.0% | |
!! | CCGCAACCATTTTTCCTTAT+TGG | + | chr3_2:52583262-52583281 | Msa0410780:intron | 40.0% |
AGCCATAGAGACAACCAATA+AGG | - | chr3_2:52583279-52583298 | None:intergenic | 40.0% | |
CTGTCTGATCTTCTCAATTG+AGG | + | chr3_2:52583380-52583399 | Msa0410780:intron | 40.0% | |
AACAGAACCCAATCAAATGG+AGG | - | chr3_2:52583501-52583520 | None:intergenic | 40.0% | |
GCTAACAGAACCCAATCAAA+TGG | - | chr3_2:52583504-52583523 | None:intergenic | 40.0% | |
GCTTCTTAGATTGAATGTCG+TGG | + | chr3_2:52583588-52583607 | Msa0410780:intron | 40.0% | |
GGTTCACCAAAAGATGAACT+TGG | - | chr3_2:52583689-52583708 | None:intergenic | 40.0% | |
! | GTTCATCTTTTGGTGAACCA+AGG | + | chr3_2:52583690-52583709 | Msa0410780:intron | 40.0% |
! | ATGAAGGAGTGCATATACCT+TGG | - | chr3_2:52583710-52583729 | None:intergenic | 40.0% |
TATGGTCATTTGAGAGTCCT+TGG | - | chr3_2:52583788-52583807 | None:intergenic | 40.0% | |
AAGGACTCTCAAATGACCAT+AGG | + | chr3_2:52583787-52583806 | Msa0410780:intron | 40.0% | |
TATGGAAAGAAAGCCTCCTA+TGG | - | chr3_2:52583806-52583825 | None:intergenic | 40.0% | |
GAGAGATACCAGATGAAGTA+TGG | - | chr3_2:52583829-52583848 | None:intergenic | 40.0% | |
TGCTTCACCCCAAAATGATT+TGG | + | chr3_2:52583901-52583920 | Msa0410780:intron | 40.0% | |
GCTTCACCCCAAAATGATTT+GGG | + | chr3_2:52583902-52583921 | Msa0410780:intron | 40.0% | |
AATCGTTCGGTTCATCCTTT+CGG | + | chr3_2:52583964-52583983 | Msa0410780:intron | 40.0% | |
GATCTACAATAGGCTGCAAA+TGG | + | chr3_2:52584043-52584062 | Msa0410780:intron | 40.0% | |
! | GACAATGGTGGAGAGTATAT+AGG | - | chr3_2:52584070-52584089 | None:intergenic | 40.0% |
AATTTCATGCCTCCGTAGAA+CGG | - | chr3_2:52584126-52584145 | None:intergenic | 40.0% | |
GACGAAAGATCAAGTTCTTC+AGG | - | chr3_2:52584158-52584177 | None:intergenic | 40.0% | |
! | TCTAGAGTGATCGTCAATGA+AGG | + | chr3_2:52584201-52584220 | Msa0410780:intron | 40.0% |
CAAAATGTTGTGAACCACCA+AGG | + | chr3_2:52584227-52584246 | Msa0410780:intron | 40.0% | |
AAGACATGAGCAAAGAACTG+TGG | - | chr3_2:52584465-52584484 | None:intergenic | 40.0% | |
ATTGCTCGTGGTAAAAAGGA+AGG | - | chr3_2:52584541-52584560 | None:intergenic | 40.0% | |
GATCATTGCTCGTGGTAAAA+AGG | - | chr3_2:52584545-52584564 | None:intergenic | 40.0% | |
CTAACTTTCCTGTCGAGATA+AGG | + | chr3_2:52584626-52584645 | Msa0410780:intron | 40.0% | |
ATAAGGTTTAGACGCATGTC+TGG | + | chr3_2:52584643-52584662 | Msa0410780:intron | 40.0% | |
GTGACTCTGGTTACAGAAAA+TGG | - | chr3_2:52584703-52584722 | None:intergenic | 40.0% | |
ACAAGCAAGATTGTTGGCAT+TGG | - | chr3_2:52584730-52584749 | None:intergenic | 40.0% | |
GATGTCACAAGCAAGATTGT+TGG | - | chr3_2:52584736-52584755 | None:intergenic | 40.0% | |
GACTTTGGTATGGTGAAGAT+GGG | - | chr3_2:52584763-52584782 | None:intergenic | 40.0% | |
AGACTTTGGTATGGTGAAGA+TGG | - | chr3_2:52584764-52584783 | None:intergenic | 40.0% | |
TTCATGAGGGGTTACATGAA+AGG | + | chr3_2:52584810-52584829 | Msa0410780:intron | 40.0% | |
! | ATCTGCCTCGTGATTTTTCA+CGG | + | chr3_2:52585082-52585101 | Msa0410780:intron | 40.0% |
GTCTTGACTCTTCATTCAAC+AGG | + | chr3_2:52585187-52585206 | Msa0410780:intron | 40.0% | |
! | TCCATGCTAAGTTTTCCATC+TGG | + | chr3_2:52585225-52585244 | Msa0410780:intron | 40.0% |
TCCAGATGGAAAACTTAGCA+TGG | - | chr3_2:52585229-52585248 | None:intergenic | 40.0% | |
! | GTGAAGTTAGAGTACTCAGA+CGG | - | chr3_2:52585408-52585427 | None:intergenic | 40.0% |
ACTTCACCAGTCTTCTAACA+AGG | + | chr3_2:52585421-52585440 | Msa0410780:intron | 40.0% | |
GGAAGTCTTTGCAATACAAG+TGG | + | chr3_2:52585646-52585665 | Msa0410780:intron | 40.0% | |
TACAAGTGGTCTTCCATCAT+TGG | + | chr3_2:52585660-52585679 | Msa0410780:intron | 40.0% | |
CACATATTGGAAGCCAATGA+TGG | - | chr3_2:52585676-52585695 | None:intergenic | 40.0% | |
GCTTGAACATATCACCATCA+TGG | + | chr3_2:52585712-52585731 | Msa0410780:intron | 40.0% | |
GTATACGATACTAGTCACAC+TGG | - | chr3_2:52585785-52585804 | None:intergenic | 40.0% | |
TTGCATGTCTAGGAAAGTTC+TGG | - | chr3_2:52585901-52585920 | None:intergenic | 40.0% | |
ATCTTGCAGATACAACACCT+CGG | + | chr3_2:52586016-52586035 | Msa0410780:intron | 40.0% | |
!!! | TATTTTGAGTTCACGGAGGA+GGG | - | chr3_2:52581168-52581187 | None:intergenic | 40.0% |
!!! | CACACAACAAGTTTTTAGCG+TGG | + | chr3_2:52581214-52581233 | Msa0410780:intron | 40.0% |
GAATACAAATCTTCACCCTC+AGG | + | chr3_2:52581312-52581331 | Msa0410780:intron | 40.0% | |
ACATAGTTATGTCCACCTGA+GGG | - | chr3_2:52581330-52581349 | None:intergenic | 40.0% | |
TACATAGTTATGTCCACCTG+AGG | - | chr3_2:52581331-52581350 | None:intergenic | 40.0% | |
TTCTCTCAACTCTATGAGTG+AGG | + | chr3_2:52581430-52581449 | Msa0410780:intron | 40.0% | |
GTGAGTGCACAAATTTGTGA+AGG | - | chr3_2:52581569-52581588 | None:intergenic | 40.0% | |
GCATCACTATGCACTACTAT+TGG | + | chr3_2:52581681-52581700 | Msa0410780:intron | 40.0% | |
AGAACTTTCTCAACTGAACC+GGG | - | chr3_2:52586781-52586800 | None:intergenic | 40.0% | |
GAGAACTTTCTCAACTGAAC+CGG | - | chr3_2:52586782-52586801 | None:intergenic | 40.0% | |
! | GAGTTTATTCGATTCGCTAG+AGG | + | chr3_2:52586912-52586931 | Msa0410780:CDS | 40.0% |
GACATCAACAAATCCTGACT+CGG | - | chr3_2:52586991-52587010 | None:intergenic | 40.0% | |
!! | GAGTCAGGATTTGTTGATGT+CGG | + | chr3_2:52586990-52587009 | Msa0410780:CDS | 40.0% |
TAGACAGATATGTAACGTGG+TGG | + | chr3_2:52587026-52587045 | Msa0410780:CDS | 40.0% | |
AAGTCTCATGTCTTTCAACC+CGG | - | chr3_2:52587068-52587087 | None:intergenic | 40.0% | |
GACATGAGACTTTGACTCAA+TGG | + | chr3_2:52587076-52587095 | Msa0410780:CDS | 40.0% | |
ATGAGACTTTGACTCAATGG+CGG | + | chr3_2:52587079-52587098 | Msa0410780:CDS | 40.0% | |
GCATTTGAACCCAAATGAAC+CGG | - | chr3_2:52587132-52587151 | None:intergenic | 40.0% | |
!! | TTGTTAGCTTTGTTTGCTGG+TGG | + | chr3_2:52587171-52587190 | Msa0410780:CDS | 40.0% |
TTATGTTAGGGTGGCATACA+AGG | + | chr3_2:52587229-52587248 | Msa0410780:CDS | 40.0% | |
GAAAAAGAAACCAACGGTGG+TGG | + | chr3_2:52580162-52580181 | Msa0410780:CDS | 45.0% | |
GACGAGTTGTTAGCAGCATT+AGG | + | chr3_2:52580189-52580208 | Msa0410780:CDS | 45.0% | |
CAAGGTTCGTTCTTCAGACA+TGG | + | chr3_2:52580215-52580234 | Msa0410780:CDS | 45.0% | |
ATGGGTAGTGCTCAAGAAGA+AGG | + | chr3_2:52580276-52580295 | Msa0410780:CDS | 45.0% | |
! | CAATGACCCTTTGGCTTCTT+TGG | + | chr3_2:52580401-52580420 | Msa0410780:CDS | 45.0% |
GAAGAACCCAAAGAAGCCAA+AGG | - | chr3_2:52580411-52580430 | None:intergenic | 45.0% | |
TCTTAGCGCTATTCCTGGAA+TGG | + | chr3_2:52580482-52580501 | Msa0410780:CDS | 45.0% | |
CAGCTAAGCGAATGAAGACT+TGG | + | chr3_2:52580535-52580554 | Msa0410780:CDS | 45.0% | |
AGCAAGTGCTTGTGCGAAAT+AGG | - | chr3_2:52580784-52580803 | None:intergenic | 45.0% | |
TACCGATGCTTTGCAACAAG+TGG | + | chr3_2:52581082-52581101 | Msa0410780:intron | 45.0% | |
ACCGATGCTTTGCAACAAGT+GGG | + | chr3_2:52581083-52581102 | Msa0410780:intron | 45.0% | |
! | TCCCACTTGTTGCAAAGCAT+CGG | - | chr3_2:52581087-52581106 | None:intergenic | 45.0% |
ATGCTTTGCAACAAGTGGGA+TGG | + | chr3_2:52581087-52581106 | Msa0410780:intron | 45.0% | |
!!! | CTATTTTGAGTTCACGGAGG+AGG | - | chr3_2:52581169-52581188 | None:intergenic | 45.0% |
CTCCTCCGTGAACTCAAAAT+AGG | + | chr3_2:52581167-52581186 | Msa0410780:intron | 45.0% | |
!!! | TGCCTATTTTGAGTTCACGG+AGG | - | chr3_2:52581172-52581191 | None:intergenic | 45.0% |
TGGAGATTTAAGAGGCCTAC+GGG | - | chr3_2:52581277-52581296 | None:intergenic | 45.0% | |
GTGGAGATTTAAGAGGCCTA+CGG | - | chr3_2:52581278-52581297 | None:intergenic | 45.0% | |
TACAAATCTTCACCCTCAGG+TGG | + | chr3_2:52581315-52581334 | Msa0410780:intron | 45.0% | |
AAATAGCACACGGTAGTGCA+AGG | - | chr3_2:52581523-52581542 | None:intergenic | 45.0% | |
TCCTTCTTCACATGGCAAGT+TGG | + | chr3_2:52581632-52581651 | Msa0410780:intron | 45.0% | |
CACTATGCACTACTATTGGC+TGG | + | chr3_2:52581685-52581704 | Msa0410780:intron | 45.0% | |
!! | TAGTTTCCTTTTGGCTGGAG+GGG | - | chr3_2:52581725-52581744 | None:intergenic | 45.0% |
!! | GATAGTTTCCTTTTGGCTGG+AGG | - | chr3_2:52581727-52581746 | None:intergenic | 45.0% |
AGCCACCCCAAACTAATCAA+AGG | - | chr3_2:52581749-52581768 | None:intergenic | 45.0% | |
TTGTAAAGAAGCTGCAGGCT+TGG | - | chr3_2:52581773-52581792 | None:intergenic | 45.0% | |
GGTCAAAACACATCGATGTG+AGG | - | chr3_2:52581912-52581931 | None:intergenic | 45.0% | |
GGTATGTCGAATTCTTGCTG+AGG | + | chr3_2:52581938-52581957 | Msa0410780:intron | 45.0% | |
TGCTGAGGTGAATTGCACTT+TGG | + | chr3_2:52581953-52581972 | Msa0410780:intron | 45.0% | |
AAGGTTGTAAGGAGATCCTG+TGG | - | chr3_2:52582041-52582060 | None:intergenic | 45.0% | |
CGCAATCACTGAAGGTTGTA+AGG | - | chr3_2:52582052-52582071 | None:intergenic | 45.0% | |
TGCGATGTACTTTGCTTCTG+TGG | + | chr3_2:52582068-52582087 | Msa0410780:intron | 45.0% | |
TACGTAGATGCTGATATGGC+CGG | - | chr3_2:52582195-52582214 | None:intergenic | 45.0% | |
GTGCTGTGAAATGGATACTG+AGG | - | chr3_2:52582281-52582300 | None:intergenic | 45.0% | |
!! | AACACTGGAGTGCTGTGAAA+TGG | - | chr3_2:52582290-52582309 | None:intergenic | 45.0% |
! | CACTCCAGTGTTCTTTTCCT+GGG | + | chr3_2:52582298-52582317 | Msa0410780:intron | 45.0% |
CAAACCCAGGAAAAGAACAC+TGG | - | chr3_2:52582305-52582324 | None:intergenic | 45.0% | |
CTACCCACTGCTGAAGAATA+GGG | + | chr3_2:52582396-52582415 | Msa0410780:intron | 45.0% | |
GGTGCAGTGAAGAAGATTCT+TGG | - | chr3_2:52582612-52582631 | None:intergenic | 45.0% | |
TAAAGCAGGCTCCAAGACAA+TGG | - | chr3_2:52582839-52582858 | None:intergenic | 45.0% | |
CTAGTTTAGCAGCTAGACCA+AGG | + | chr3_2:52583003-52583022 | Msa0410780:intron | 45.0% | |
ATGGATGTCATCTTCACCAC+CGG | + | chr3_2:52583035-52583054 | Msa0410780:intron | 45.0% | |
!! | AAGGGGTGCCATCAAAAGAA+AGG | - | chr3_2:52583086-52583105 | None:intergenic | 45.0% |
AAGCACGAATTGTCGTGAAG+GGG | - | chr3_2:52583103-52583122 | None:intergenic | 45.0% | |
CAAAGCACGAATTGTCGTGA+AGG | - | chr3_2:52583105-52583124 | None:intergenic | 45.0% | |
! | GTGCTTTGTATCTGGGGTTT+GGG | + | chr3_2:52583117-52583136 | Msa0410780:intron | 45.0% |
TTCAATGCCCTCTTTCCATC+TGG | + | chr3_2:52583179-52583198 | Msa0410780:intron | 45.0% | |
AGACTGCATCTCTTCTTCCA+TGG | + | chr3_2:52583238-52583257 | Msa0410780:intron | 45.0% | |
ATGGCTTCCATGAAGCTTTG+AGG | + | chr3_2:52583293-52583312 | Msa0410780:intron | 45.0% | |
AGGAGAACCTCAAAGCTTCA+TGG | - | chr3_2:52583303-52583322 | None:intergenic | 45.0% | |
GCCCTCTGTTCTTCATGTAT+TGG | + | chr3_2:52583449-52583468 | Msa0410780:intron | 45.0% | |
ATCAGGCTCCTCCATTTGAT+TGG | + | chr3_2:52583490-52583509 | Msa0410780:intron | 45.0% | |
TCAGGCTCCTCCATTTGATT+GGG | + | chr3_2:52583491-52583510 | Msa0410780:intron | 45.0% | |
CGAACCATCTTCTTAGTAGC+AGG | + | chr3_2:52583647-52583666 | Msa0410780:intron | 45.0% | |
GGATCCTGCTACTAAGAAGA+TGG | - | chr3_2:52583654-52583673 | None:intergenic | 45.0% | |
GACTCTCAAATGACCATAGG+AGG | + | chr3_2:52583790-52583809 | Msa0410780:intron | 45.0% | |
AGATGAATGGAGTAGCCGAA+AGG | - | chr3_2:52583982-52584001 | None:intergenic | 45.0% | |
TCCATTCATCTGAGGAGTCT+TGG | + | chr3_2:52583991-52584010 | Msa0410780:intron | 45.0% | |
CCATTCATCTGAGGAGTCTT+GGG | + | chr3_2:52583992-52584011 | Msa0410780:intron | 45.0% | |
GCAGCCTATTGTAGATCTCA+TGG | - | chr3_2:52584040-52584059 | None:intergenic | 45.0% | |
ATTTCATGCCTCCGTAGAAC+GGG | - | chr3_2:52584125-52584144 | None:intergenic | 45.0% | |
TCTACATCTGAAAGGTCCCT+TGG | - | chr3_2:52584247-52584266 | None:intergenic | 45.0% | |
TCCTGTGAAGATTGTCTAGC+AGG | - | chr3_2:52584355-52584374 | None:intergenic | 45.0% | |
CAATCTTCACAGGATTCCAG+TGG | + | chr3_2:52584361-52584380 | Msa0410780:intron | 45.0% | |
AAACATCAAGGGTCAACCAC+TGG | - | chr3_2:52584380-52584399 | None:intergenic | 45.0% | |
AGTGGTTGACCCTTGATGTT+TGG | + | chr3_2:52584379-52584398 | Msa0410780:intron | 45.0% | |
CCACATGAGCGAGAAAAGTT+TGG | - | chr3_2:52584428-52584447 | None:intergenic | 45.0% | |
! | CCAAACTTTTCTCGCTCATG+TGG | + | chr3_2:52584425-52584444 | Msa0410780:intron | 45.0% |
GGCTCTCTGTATGTTATGCA+GGG | - | chr3_2:52584520-52584539 | None:intergenic | 45.0% | |
AGGCTCTCTGTATGTTATGC+AGG | - | chr3_2:52584521-52584540 | None:intergenic | 45.0% | |
GGTAGATGGAAGCTCAGTAA+GGG | - | chr3_2:52584574-52584593 | None:intergenic | 45.0% | |
TGGTAGATGGAAGCTCAGTA+AGG | - | chr3_2:52584575-52584594 | None:intergenic | 45.0% | |
TCCATCTACCAGCTCCAAAT+TGG | + | chr3_2:52584584-52584603 | Msa0410780:intron | 45.0% | |
! | ACCAATTTGGAGCTGGTAGA+TGG | - | chr3_2:52584588-52584607 | None:intergenic | 45.0% |
CGTCTAAACCTTATCTCGAC+AGG | - | chr3_2:52584637-52584656 | None:intergenic | 45.0% | |
TAGCGTCTGATGACTGCATT+TGG | - | chr3_2:52584855-52584874 | None:intergenic | 45.0% | |
ATCCTTCAAGAGAGATCAGC+AGG | - | chr3_2:52584995-52585014 | None:intergenic | 45.0% | |
!! | TTTCACGGCCACCTTTTTCA+CGG | + | chr3_2:52585097-52585116 | Msa0410780:intron | 45.0% |
AGCAAGAACCGTGAAAAAGG+TGG | - | chr3_2:52585108-52585127 | None:intergenic | 45.0% | |
AGGAGCAAGAACCGTGAAAA+AGG | - | chr3_2:52585111-52585130 | None:intergenic | 45.0% | |
GAGTCAAGACGAAGAGAAAG+AGG | - | chr3_2:52585177-52585196 | None:intergenic | 45.0% | |
! | ATTAGAGTGTCCCAACTCTC+AGG | + | chr3_2:52585270-52585289 | Msa0410780:intron | 45.0% |
CAGTTCCTTACCTGAGAGTT+GGG | - | chr3_2:52585283-52585302 | None:intergenic | 45.0% | |
TCAGTTCCTTACCTGAGAGT+TGG | - | chr3_2:52585284-52585303 | None:intergenic | 45.0% | |
AGCACACCTTGTTAGAAGAC+TGG | - | chr3_2:52585430-52585449 | None:intergenic | 45.0% | |
CGTCCATAACTCATACGCAT+TGG | + | chr3_2:52585491-52585510 | Msa0410780:intron | 45.0% | |
GAAAAAGACCGCTACCGAAT+GGG | - | chr3_2:52585595-52585614 | None:intergenic | 45.0% | |
AGAAAAAGACCGCTACCGAA+TGG | - | chr3_2:52585596-52585615 | None:intergenic | 45.0% | |
!! | TTCGGTAGCGGTCTTTTTCT+CGG | + | chr3_2:52585596-52585615 | Msa0410780:intron | 45.0% |
!!! | CTTTTTGGGTGATTGGCTCA+TGG | + | chr3_2:52585625-52585644 | Msa0410780:intron | 45.0% |
CGGCTGACAACTACACATAT+TGG | - | chr3_2:52585689-52585708 | None:intergenic | 45.0% | |
GATGGTTCAATCAGCCATGA+TGG | - | chr3_2:52585729-52585748 | None:intergenic | 45.0% | |
CCTGTGTAACTCAAGATGGA+TGG | - | chr3_2:52585747-52585766 | None:intergenic | 45.0% | |
CCATCCATCTTGAGTTACAC+AGG | + | chr3_2:52585744-52585763 | Msa0410780:intron | 45.0% | |
TAGTTCGTGAATAGTGCACC+AGG | + | chr3_2:52585815-52585834 | Msa0410780:intron | 45.0% | |
! | CTCTTACCTGGGAATTTTCC+TGG | - | chr3_2:52585836-52585855 | None:intergenic | 45.0% |
GGAAAATTCCCAGGTAAGAG+AGG | + | chr3_2:52585836-52585855 | Msa0410780:intron | 45.0% | |
AAATTCCCAGGTAAGAGAGG+TGG | + | chr3_2:52585839-52585858 | Msa0410780:intron | 45.0% | |
AATTCCCAGGTAAGAGAGGT+GGG | + | chr3_2:52585840-52585859 | Msa0410780:intron | 45.0% | |
! | AGTTCTGGCAAGGAAAGACT+TGG | - | chr3_2:52585886-52585905 | None:intergenic | 45.0% |
! | TGTCTAGGAAAGTTCTGGCA+AGG | - | chr3_2:52585896-52585915 | None:intergenic | 45.0% |
!!! | CTATTTTGAGTTCACGGAGG+AGG | - | chr3_2:52581169-52581188 | None:intergenic | 45.0% |
CTCCTCCGTGAACTCAAAAT+AGG | + | chr3_2:52581167-52581186 | Msa0410780:intron | 45.0% | |
!!! | TGCCTATTTTGAGTTCACGG+AGG | - | chr3_2:52581172-52581191 | None:intergenic | 45.0% |
TGGAGATTTAAGAGGCCTAC+GGG | - | chr3_2:52581277-52581296 | None:intergenic | 45.0% | |
GTGGAGATTTAAGAGGCCTA+CGG | - | chr3_2:52581278-52581297 | None:intergenic | 45.0% | |
TACAAATCTTCACCCTCAGG+TGG | + | chr3_2:52581315-52581334 | Msa0410780:intron | 45.0% | |
AAATAGCACACGGTAGTGCA+AGG | - | chr3_2:52581523-52581542 | None:intergenic | 45.0% | |
TCCTTCTTCACATGGCAAGT+TGG | + | chr3_2:52581632-52581651 | Msa0410780:intron | 45.0% | |
CACTATGCACTACTATTGGC+TGG | + | chr3_2:52581685-52581704 | Msa0410780:intron | 45.0% | |
TTCGAACTGAACACCGTGTA+GGG | - | chr3_2:52586641-52586660 | None:intergenic | 45.0% | |
ATTCGAACTGAACACCGTGT+AGG | - | chr3_2:52586642-52586661 | None:intergenic | 45.0% | |
GGTGTTCAGTTCGAATTTCG+TGG | + | chr3_2:52586646-52586665 | Msa0410780:CDS | 45.0% | |
GTCGGATCTCAAGCATATTC+GGG | - | chr3_2:52586702-52586721 | None:intergenic | 45.0% | |
GGTCGGATCTCAAGCATATT+CGG | - | chr3_2:52586703-52586722 | None:intergenic | 45.0% | |
AATATGCTTGAGATCCGACC+CGG | + | chr3_2:52586703-52586722 | Msa0410780:CDS | 45.0% | |
TTAACAGCAACAGCTTCACC+GGG | - | chr3_2:52586724-52586743 | None:intergenic | 45.0% | |
GTTAACAGCAACAGCTTCAC+CGG | - | chr3_2:52586725-52586744 | None:intergenic | 45.0% | |
!! | AGAAGCGAATCATAACGGAC+CGG | + | chr3_2:52586849-52586868 | Msa0410780:CDS | 45.0% |
GTAAACCGGTCTACGAAAAC+CGG | - | chr3_2:52586871-52586890 | None:intergenic | 45.0% | |
TAACTTGAACTCAACCGGGT+TGG | + | chr3_2:52586960-52586979 | Msa0410780:CDS | 45.0% | |
AACTTGAACTCAACCGGGTT+GGG | + | chr3_2:52586961-52586980 | Msa0410780:CDS | 45.0% | |
GGGTAGACAGATATGTAACG+TGG | + | chr3_2:52587023-52587042 | Msa0410780:CDS | 45.0% | |
TGTAACGTGGTGGCTTATGA+AGG | + | chr3_2:52587036-52587055 | Msa0410780:CDS | 45.0% | |
!! | TTGCTGGTGGTGATGGTTAT+AGG | + | chr3_2:52587184-52587203 | Msa0410780:CDS | 45.0% |
!! | TGCTGGTGGTGATGGTTATA+GGG | + | chr3_2:52587185-52587204 | Msa0410780:CDS | 45.0% |
!! | TGGTGATGGTTATAGGGTTG+AGG | + | chr3_2:52587191-52587210 | Msa0410780:CDS | 45.0% |
ATGGGTGTCTTATGTTAGGG+TGG | + | chr3_2:52587220-52587239 | Msa0410780:CDS | 45.0% | |
! | CACTCATTGCTACTTCTGCT+TGG | + | chr3_2:52587253-52587272 | Msa0410780:CDS | 45.0% |
!! | AGAAACCAACGGTGGTGGAA+TGG | + | chr3_2:52580167-52580186 | Msa0410780:CDS | 50.0% |
AGGGTTGAGTTCAGTGAGCA+TGG | - | chr3_2:52580367-52580386 | None:intergenic | 50.0% | |
! | GACTTGGTCTGAACCAGAAC+CGG | + | chr3_2:52580551-52580570 | Msa0410780:CDS | 50.0% |
!! | GGTGGTGGAGAATACAAGAC+CGG | + | chr3_2:52580596-52580615 | Msa0410780:CDS | 50.0% |
GCTATTCTCGAAGCTTTCGC+CGG | + | chr3_2:52580921-52580940 | Msa0410780:CDS | 50.0% | |
AACATGAACTCTTCCGGCAC+CGG | - | chr3_2:52580943-52580962 | None:intergenic | 50.0% | |
! | GCTCAGCTTGCTCAGACAAT+CGG | + | chr3_2:52581116-52581135 | Msa0410780:intron | 50.0% |
TGCTCAGACAATCGGTGTGT+TGG | + | chr3_2:52581124-52581143 | Msa0410780:intron | 50.0% | |
GCTCAGACAATCGGTGTGTT+GGG | + | chr3_2:52581125-52581144 | Msa0410780:intron | 50.0% | |
ACGGAGGAGGGAAATTATGC+AGG | - | chr3_2:52581156-52581175 | None:intergenic | 50.0% | |
TCTCAACACTCTGCGTGTTG+AGG | + | chr3_2:52581467-52581486 | Msa0410780:intron | 50.0% | |
GCCAACTTGCCATGTGAAGA+AGG | - | chr3_2:52581636-52581655 | None:intergenic | 50.0% | |
!! | AGTTTCCTTTTGGCTGGAGG+GGG | - | chr3_2:52581724-52581743 | None:intergenic | 50.0% |
GATTCTGGCCTAACTCTTGC+AGG | + | chr3_2:52582004-52582023 | Msa0410780:intron | 50.0% | |
GCAGGAACTTCTTCATCCAC+AGG | + | chr3_2:52582022-52582041 | Msa0410780:intron | 50.0% | |
! | GCACTCCAGTGTTCTTTTCC+TGG | + | chr3_2:52582297-52582316 | Msa0410780:intron | 50.0% |
! | CCAGACATCGGTTATGCTGT+AGG | - | chr3_2:52582348-52582367 | None:intergenic | 50.0% |
CCTACAGCATAACCGATGTC+TGG | + | chr3_2:52582345-52582364 | Msa0410780:intron | 50.0% | |
TGCAGACCATGGCGTACATA+AGG | + | chr3_2:52582373-52582392 | Msa0410780:intron | 50.0% | |
GCTACCCACTGCTGAAGAAT+AGG | + | chr3_2:52582395-52582414 | Msa0410780:intron | 50.0% | |
GTGCCCTATTCTTCAGCAGT+GGG | - | chr3_2:52582402-52582421 | None:intergenic | 50.0% | |
! | CACACAAGGTGTTCTTTGCC+TGG | + | chr3_2:52582885-52582904 | Msa0410780:intron | 50.0% |
CCTGAAGGTTTCGTTGAACC+AGG | - | chr3_2:52582906-52582925 | None:intergenic | 50.0% | |
CCTGGTTCAACGAAACCTTC+AGG | + | chr3_2:52582903-52582922 | Msa0410780:intron | 50.0% | |
! | CGTGCTTTGTATCTGGGGTT+TGG | + | chr3_2:52583116-52583135 | Msa0410780:intron | 50.0% |
GGAGAATGAGACGTATGACC+TGG | - | chr3_2:52583213-52583232 | None:intergenic | 50.0% | |
GGAAAAATGGTTGCGGTCCA+TGG | - | chr3_2:52583258-52583277 | None:intergenic | 50.0% | |
GCACAAATGCTCTGCATCCA+AGG | + | chr3_2:52583768-52583787 | Msa0410780:intron | 50.0% | |
TCGGCTACTCCATTCATCTG+AGG | + | chr3_2:52583983-52584002 | Msa0410780:intron | 50.0% | |
CCCAAGACTCCTCAGATGAA+TGG | - | chr3_2:52583995-52584014 | None:intergenic | 50.0% | |
TTCATCTGAGGAGTCTTGGG+AGG | + | chr3_2:52583995-52584014 | Msa0410780:intron | 50.0% | |
TCTTCCAGTTGCCCGTTCTA+CGG | + | chr3_2:52584111-52584130 | Msa0410780:intron | 50.0% | |
ACATCTGAAAGGTCCCTTGG+TGG | - | chr3_2:52584244-52584263 | None:intergenic | 50.0% | |
GCCTGCTAGACAATCTTCAC+AGG | + | chr3_2:52584351-52584370 | Msa0410780:intron | 50.0% | |
GAACTGTGGCACAAACGACT+TGG | - | chr3_2:52584451-52584470 | None:intergenic | 50.0% | |
! | GGAAGCATGATCATTGCTCG+TGG | - | chr3_2:52584553-52584572 | None:intergenic | 50.0% |
CTCTAAGCTCGTGTTGAAGG+AGG | - | chr3_2:52584680-52584699 | None:intergenic | 50.0% | |
!! | TGGCTCTAAGCTCGTGTTGA+AGG | - | chr3_2:52584683-52584702 | None:intergenic | 50.0% |
!! | CAAGATTGTTGGCATTGGCG+AGG | - | chr3_2:52584725-52584744 | None:intergenic | 50.0% |
TTCAAGAGAGATCAGCAGGC+TGG | - | chr3_2:52584991-52585010 | None:intergenic | 50.0% | |
AGCCTGCTGATCTCTCTTGA+AGG | + | chr3_2:52584990-52585009 | Msa0410780:intron | 50.0% | |
CTCAGCAATTCTGCTCCAGA+TGG | - | chr3_2:52585243-52585262 | None:intergenic | 50.0% | |
AGTGTCCCAACTCTCAGGTA+AGG | + | chr3_2:52585275-52585294 | Msa0410780:intron | 50.0% | |
!! | TCGGTAGCGGTCTTTTTCTC+GGG | + | chr3_2:52585597-52585616 | Msa0410780:intron | 50.0% |
AGTGCACCAGGAAAATTCCC+AGG | + | chr3_2:52585827-52585846 | Msa0410780:intron | 50.0% | |
TTGACCCACCTCTCTTACCT+GGG | - | chr3_2:52585847-52585866 | None:intergenic | 50.0% | |
ATTGACCCACCTCTCTTACC+TGG | - | chr3_2:52585848-52585867 | None:intergenic | 50.0% | |
GGTGCTCTGATACCACTGTT+GGG | + | chr3_2:52586054-52586073 | Msa0410780:intron | 50.0% | |
ATGCAGGCATTTCCCAACAG+TGG | - | chr3_2:52586069-52586088 | None:intergenic | 50.0% | |
ACGGAGGAGGGAAATTATGC+AGG | - | chr3_2:52581156-52581175 | None:intergenic | 50.0% | |
TCTCAACACTCTGCGTGTTG+AGG | + | chr3_2:52581467-52581486 | Msa0410780:intron | 50.0% | |
GCCAACTTGCCATGTGAAGA+AGG | - | chr3_2:52581636-52581655 | None:intergenic | 50.0% | |
! | ACTATTGGCTGGACCCTACA+CGG | + | chr3_2:52581696-52581715 | Msa0410780:intron | 50.0% |
CATACTATGTTAGCCCGACC+CGG | + | chr3_2:52586760-52586779 | Msa0410780:CDS | 50.0% | |
TTTCTCAACTGAACCGGGTC+GGG | - | chr3_2:52586776-52586795 | None:intergenic | 50.0% | |
CTTTCTCAACTGAACCGGGT+CGG | - | chr3_2:52586777-52586796 | None:intergenic | 50.0% | |
TGGCTTATGAAGGAGTGGAC+CGG | + | chr3_2:52587046-52587065 | Msa0410780:CDS | 50.0% | |
CTTTGACTCAATGGCGGTCT+AGG | + | chr3_2:52587085-52587104 | Msa0410780:CDS | 50.0% | |
! | ACTCAATGGCGGTCTAGGAT+GGG | + | chr3_2:52587090-52587109 | Msa0410780:CDS | 50.0% |
! | TGGGTTCGAACCGGTTCATT+TGG | + | chr3_2:52587119-52587138 | Msa0410780:CDS | 50.0% |
! | GGGTTCGAACCGGTTCATTT+GGG | + | chr3_2:52587120-52587139 | Msa0410780:CDS | 50.0% |
!! | GCTTTGTTTGCTGGTGGTGA+TGG | + | chr3_2:52587177-52587196 | Msa0410780:CDS | 50.0% |
TTGGTCTGAACCAGAACCGG+CGG | + | chr3_2:52580554-52580573 | Msa0410780:CDS | 55.0% | |
CTTGTATTCTCCACCACCGC+CGG | - | chr3_2:52580594-52580613 | None:intergenic | 55.0% | |
GGTGGAGAATACAAGACCGG+TGG | + | chr3_2:52580599-52580618 | Msa0410780:CDS | 55.0% | |
CCTCCTACGTTCCGGTTAAC+CGG | + | chr3_2:52581035-52581054 | Msa0410780:intron | 55.0% | |
! | ATGCCGGTTAACCGGAACGT+AGG | - | chr3_2:52581041-52581060 | None:intergenic | 55.0% |
ACGTTCCGGTTAACCGGCAT+CGG | + | chr3_2:52581041-52581060 | Msa0410780:intron | 55.0% | |
GTAAAAACCACGGGACCCGT+AGG | + | chr3_2:52581259-52581278 | Msa0410780:intron | 55.0% | |
GCTGGAGGGGGAGAATTGTA+GGG | - | chr3_2:52581712-52581731 | None:intergenic | 55.0% | |
ATTCTCCCCCTCCAGCCAAA+AGG | + | chr3_2:52581716-52581735 | Msa0410780:intron | 55.0% | |
!! | GGGTAGCCTTATGTACGCCA+TGG | - | chr3_2:52582382-52582401 | None:intergenic | 55.0% |
GGTGCCCTATTCTTCAGCAG+TGG | - | chr3_2:52582403-52582422 | None:intergenic | 55.0% | |
GATGGTTCGAAGCAGAGACG+TGG | - | chr3_2:52583636-52583655 | None:intergenic | 55.0% | |
GGTGGCCGTGAAAAATCACG+AGG | - | chr3_2:52585090-52585109 | None:intergenic | 55.0% | |
GACGGAGAATCGGAAGACAG+TGG | - | chr3_2:52585571-52585590 | None:intergenic | 55.0% | |
CCGAATGGGAGACGGAGAAT+CGG | - | chr3_2:52585581-52585600 | None:intergenic | 55.0% | |
CCGATTCTCCGTCTCCCATT+CGG | + | chr3_2:52585578-52585597 | Msa0410780:intron | 55.0% | |
! | ATCAGAGCACCCGTTGCTCT+GGG | - | chr3_2:52586045-52586064 | None:intergenic | 55.0% |
! | TATCAGAGCACCCGTTGCTC+TGG | - | chr3_2:52586046-52586065 | None:intergenic | 55.0% |
GGGTGCTCTGATACCACTGT+TGG | + | chr3_2:52586053-52586072 | Msa0410780:intron | 55.0% | |
GTAAAAACCACGGGACCCGT+AGG | + | chr3_2:52581259-52581278 | Msa0410780:intron | 55.0% | |
!! | ACGGACCGGTTTTCGTAGAC+CGG | + | chr3_2:52586863-52586882 | Msa0410780:CDS | 55.0% |
CGTGGTGGCTTATGAAGGAG+TGG | + | chr3_2:52587041-52587060 | Msa0410780:CDS | 55.0% | |
GGCTTATGAAGGAGTGGACC+GGG | + | chr3_2:52587047-52587066 | Msa0410780:CDS | 55.0% | |
GACTCAATGGCGGTCTAGGA+TGG | + | chr3_2:52587089-52587108 | Msa0410780:CDS | 55.0% | |
! | GGTCTAGGATGGGTTCAGCT+GGG | + | chr3_2:52587100-52587119 | Msa0410780:CDS | 55.0% |
CTCGTCCATTCCACCACCGT+TGG | - | chr3_2:52580175-52580194 | None:intergenic | 60.0% | |
GGTGGGTATGCAGCCATTCC+AGG | - | chr3_2:52580498-52580517 | None:intergenic | 60.0% | |
CCGGTTAACCGGAACGTAGG+AGG | - | chr3_2:52581038-52581057 | None:intergenic | 60.0% | |
! | GCATCGGTATTGTCCGCCTG+CGG | - | chr3_2:52581071-52581090 | None:intergenic | 60.0% |
GGCTGGAGGGGGAGAATTGT+AGG | - | chr3_2:52581713-52581732 | None:intergenic | 60.0% | |
TTGCAGGGGGAGCTGTCTCA+TGG | - | chr3_2:52582128-52582147 | None:intergenic | 60.0% | |
GTCTGCACGAGGCCAGACAT+CGG | - | chr3_2:52582360-52582379 | None:intergenic | 60.0% | |
TGTACGCCATGGTCTGCACG+AGG | - | chr3_2:52582371-52582390 | None:intergenic | 60.0% | |
CCTGTGCATGTTCCGCTACC+TGG | - | chr3_2:52582489-52582508 | None:intergenic | 60.0% | |
!! | CCAGGTAGCGGAACATGCAC+AGG | + | chr3_2:52582486-52582505 | Msa0410780:intron | 60.0% |
TCCAGTTGCCCGTTCTACGG+AGG | + | chr3_2:52584114-52584133 | Msa0410780:intron | 60.0% | |
!! | TGGCATTGGCGAGGTGACTC+TGG | - | chr3_2:52584716-52584735 | None:intergenic | 60.0% |
GGTTGCTACGACTGCTGTCG+TGG | + | chr3_2:52584918-52584937 | Msa0410780:intron | 60.0% | |
CTCCGTCTCCCATTCGGTAG+CGG | + | chr3_2:52585584-52585603 | Msa0410780:intron | 60.0% | |
GACCGCTACCGAATGGGAGA+CGG | - | chr3_2:52585589-52585608 | None:intergenic | 60.0% | |
ACCTCGGAGTCCCAGAGCAA+CGG | + | chr3_2:52586032-52586051 | Msa0410780:intron | 60.0% | |
CAGCAACAGCTTCACCGGGT+CGG | - | chr3_2:52586720-52586739 | None:intergenic | 60.0% | |
!! | CTGACTCGGTGAACCCAACC+CGG | - | chr3_2:52586977-52586996 | None:intergenic | 60.0% |
! | CGGTCTAGGATGGGTTCAGC+TGG | + | chr3_2:52587099-52587118 | Msa0410780:CDS | 60.0% |
GGGTTCAGCTGGGTTCGAAC+CGG | + | chr3_2:52587110-52587129 | Msa0410780:CDS | 60.0% | |
GTCTGAACCAGAACCGGCGG+TGG | + | chr3_2:52580557-52580576 | Msa0410780:CDS | 65.0% | |
GTATTCTCCACCACCGCCGG+TGG | - | chr3_2:52580591-52580610 | None:intergenic | 65.0% | |
CTCGAAGCTTTCGCCGGTGC+CGG | + | chr3_2:52580927-52580946 | Msa0410780:CDS | 65.0% | |
GCCAGCGCTTATGCAAGCGC+TGG | + | chr3_2:52580995-52581014 | Msa0410780:CDS | 65.0% | |
GCCAGCGCTTGCATAAGCGC+TGG | - | chr3_2:52580999-52581018 | None:intergenic | 65.0% | |
!! | CAAGCGCTGGCATTACGCCC+CGG | + | chr3_2:52581008-52581027 | Msa0410780:CDS | 65.0% |
! | GCGGTCCGATGCCGGTTAAC+CGG | - | chr3_2:52581049-52581068 | None:intergenic | 65.0% |
TCGGTATTGTCCGCCTGCGG+CGG | - | chr3_2:52581068-52581087 | None:intergenic | 65.0% | |
TAAGAGGCCTACGGGTCCCG+TGG | - | chr3_2:52581269-52581288 | None:intergenic | 65.0% | |
GTCTGGCCTCGTGCAGACCA+TGG | + | chr3_2:52582362-52582381 | Msa0410780:intron | 65.0% | |
GCCTCCGTAGAACGGGCAAC+TGG | - | chr3_2:52584118-52584137 | None:intergenic | 65.0% | |
CCTCGGAGTCCCAGAGCAAC+GGG | + | chr3_2:52586033-52586052 | Msa0410780:intron | 65.0% | |
TAAGAGGCCTACGGGTCCCG+TGG | - | chr3_2:52581269-52581288 | None:intergenic | 65.0% | |
! | CGGGTTGGGTTCACCGAGTC+AGG | + | chr3_2:52586975-52586994 | Msa0410780:CDS | 65.0% |
!! | GACATCGCCACCGCCGGTTC+TGG | - | chr3_2:52580567-52580586 | None:intergenic | 70.0% |
GGTGGTGACATCGCCACCGC+CGG | - | chr3_2:52580573-52580592 | None:intergenic | 70.0% | |
GGCGGTGGCGATGTCACCAC+CGG | + | chr3_2:52580572-52580591 | Msa0410780:CDS | 70.0% | |
GGTGGCGATGTCACCACCGG+CGG | + | chr3_2:52580575-52580594 | Msa0410780:CDS | 70.0% | |
GATGTCACCACCGGCGGTGG+TGG | + | chr3_2:52580581-52580600 | Msa0410780:CDS | 70.0% | |
GGAACGTAGGAGGACCGCCG+GGG | - | chr3_2:52581028-52581047 | None:intergenic | 70.0% | |
CGGAACGTAGGAGGACCGCC+GGG | - | chr3_2:52581029-52581048 | None:intergenic | 70.0% | |
CCGGAACGTAGGAGGACCGC+CGG | - | chr3_2:52581030-52581049 | None:intergenic | 70.0% | |
CCGGCGGTCCTCCTACGTTC+CGG | + | chr3_2:52581027-52581046 | Msa0410780:CDS | 70.0% | |
!! | CCCGTTGCTCTGGGACTCCG+AGG | - | chr3_2:52586036-52586055 | None:intergenic | 70.0% |
GGCGATGTCACCACCGGCGG+TGG | + | chr3_2:52580578-52580597 | Msa0410780:CDS | 75.0% | |
! | GCGCTGGCATTACGCCCCGG+CGG | + | chr3_2:52581011-52581030 | Msa0410780:CDS | 75.0% |
! | AACCGGCATCGGACCGCCGC+AGG | + | chr3_2:52581052-52581071 | Msa0410780:intron | 75.0% |
! | CGCCTGCGGCGGTCCGATGC+CGG | - | chr3_2:52581057-52581076 | None:intergenic | 80.0% |
!! | CGGCATCGGACCGCCGCAGG+CGG | + | chr3_2:52581055-52581074 | Msa0410780:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 52580150 | 52587302 | 52580150 | ID=Msa0410780;Name=Msa0410780 |
chr3_2 | mRNA | 52580150 | 52587302 | 52580150 | ID=Msa0410780-mRNA-1;Parent=Msa0410780;Name=Msa0410780-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|554 |
chr3_2 | exon | 52580150 | 52581048 | 52580150 | ID=Msa0410780-mRNA-1:exon:10422;Parent=Msa0410780-mRNA-1 |
chr3_2 | exon | 52586537 | 52587302 | 52586537 | ID=Msa0410780-mRNA-1:exon:10423;Parent=Msa0410780-mRNA-1 |
chr3_2 | CDS | 52580150 | 52581048 | 52580150 | ID=Msa0410780-mRNA-1:cds;Parent=Msa0410780-mRNA-1 |
chr3_2 | CDS | 52586537 | 52587302 | 52586537 | ID=Msa0410780-mRNA-1:cds;Parent=Msa0410780-mRNA-1 |
Gene Sequence |
Protein sequence |