AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0411830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411830 MtrunA17_Chr3g0103281 98.154 325 3 1 1 322 1 325 0.0 672
Msa0411830 MtrunA17_Chr6g0452271 56.000 175 72 1 1 175 1 170 1.33e-65 209
Msa0411830 MtrunA17_Chr4g0048511 70.543 129 37 1 1 128 1 129 9.62e-65 208
Msa0411830 MtrunA17_Chr3g0115821 52.459 183 75 1 1 171 1 183 2.02e-63 204
Msa0411830 MtrunA17_Chr2g0281071 68.992 129 39 1 1 128 1 129 2.41e-63 204
Msa0411830 MtrunA17_Chr7g0217741 68.750 128 40 0 1 128 1 128 6.61e-62 199
Msa0411830 MtrunA17_Chr6g0453471 59.211 152 62 0 1 152 1 152 8.37e-62 200
Msa0411830 MtrunA17_Chr4g0042671 68.750 128 40 0 1 128 1 128 1.33e-60 199
Msa0411830 MtrunA17_Chr2g0323411 65.672 134 45 1 1 133 1 134 1.86e-60 196
Msa0411830 MtrunA17_Chr4g0039971 61.111 144 53 1 1 141 2 145 2.09e-60 196
Msa0411830 MtrunA17_Chr5g0410961 50.251 199 80 4 1 182 1 197 3.07e-60 196
Msa0411830 MtrunA17_Chr4g0037141 57.432 148 59 1 1 148 1 144 1.65e-59 192
Msa0411830 MtrunA17_Chr3g0131121 54.902 153 67 1 1 153 1 151 2.95e-58 189
Msa0411830 MtrunA17_Chr4g0057031 63.846 130 47 0 1 130 1 130 4.21e-58 188
Msa0411830 MtrunA17_Chr5g0434571 48.768 203 84 1 1 203 37 219 4.43e-58 191
Msa0411830 MtrunA17_Chr7g0228891 62.595 131 49 0 1 131 1 131 6.13e-58 187
Msa0411830 MtrunA17_Chr7g0270891 58.442 154 61 1 1 151 1 154 1.29e-57 190
Msa0411830 MtrunA17_Chr3g0110351 61.871 139 53 0 1 139 1 139 2.09e-57 187
Msa0411830 MtrunA17_Chr1g0193371 64.394 132 47 0 1 132 1 132 4.53e-57 188
Msa0411830 MtrunA17_Chr1g0193801 64.394 132 47 0 1 132 1 132 1.40e-56 187
Msa0411830 MtrunA17_Chr4g0058631 63.077 130 48 0 1 130 1 130 1.74e-55 184
Msa0411830 MtrunA17_Chr3g0117091 63.566 129 47 0 1 129 1 129 5.24e-55 182
Msa0411830 MtrunA17_Chr4g0028311 64.062 128 45 1 1 127 1 128 1.64e-54 181
Msa0411830 MtrunA17_Chr8g0385321 59.091 132 54 0 1 132 1 132 1.94e-54 180
Msa0411830 MtrunA17_Chr2g0309911 62.400 125 47 0 6 130 5 129 5.02e-54 179
Msa0411830 MtrunA17_Chr1g0203411 65.517 116 40 0 1 116 1 116 5.14e-54 178
Msa0411830 MtrunA17_Chr1g0152011 68.067 119 37 1 1 118 1 119 5.25e-54 179
Msa0411830 MtrunA17_Chr5g0395281 60.938 128 50 0 1 128 1 128 7.17e-54 178
Msa0411830 MtrunA17_Chr1g0151941 57.718 149 57 3 1 147 1 145 8.43e-54 176
Msa0411830 MtrunA17_Chr7g0271241 65.385 130 45 0 1 130 1 130 1.88e-53 179
Msa0411830 MtrunA17_Chr1g0211161 61.417 127 49 0 3 129 4 130 3.12e-53 174
Msa0411830 MtrunA17_Chr7g0264641 65.000 120 41 1 1 119 1 120 3.28e-53 176
Msa0411830 MtrunA17_Chr5g0400821 66.387 119 39 1 1 118 1 119 3.67e-53 176
Msa0411830 MtrunA17_Chr5g0435101 60.800 125 49 0 3 127 2 126 3.77e-53 173
Msa0411830 MtrunA17_Chr3g0135311 65.546 119 40 1 1 118 1 119 4.90e-53 177
Msa0411830 MtrunA17_Chr1g0187761 66.379 116 39 0 1 116 1 116 1.17e-52 174
Msa0411830 MtrunA17_Chr1g0167661 65.517 116 40 0 1 116 1 116 1.70e-52 173
Msa0411830 MtrunA17_Chr8g0349261 55.152 165 62 6 1 153 1 165 2.82e-52 174
Msa0411830 MtrunA17_Chr1g0167691 64.655 116 41 0 1 116 1 116 3.02e-52 172
Msa0411830 MtrunA17_Chr3g0121241 61.600 125 48 0 5 129 35 159 7.29e-52 173
Msa0411830 MtrunA17_Chr1g0194951 56.250 144 57 1 1 144 1 138 1.00e-51 174
Msa0411830 MtrunA17_Chr4g0060721 64.655 116 41 0 1 116 2 117 4.79e-51 172
Msa0411830 MtrunA17_Chr2g0323351 61.207 116 45 0 1 116 1 116 8.47e-51 169
Msa0411830 MtrunA17_Chr4g0068061 62.931 116 43 0 1 116 1 116 9.37e-51 171
Msa0411830 MtrunA17_Chr2g0327351 66.667 111 36 1 1 110 1 111 1.13e-50 170
Msa0411830 MtrunA17_Chr4g0070641 61.345 119 46 0 1 119 1 119 1.36e-50 165
Msa0411830 MtrunA17_Chr4g0070611 61.345 119 46 0 1 119 1 119 2.36e-50 169
Msa0411830 MtrunA17_Chr5g0417821 60.504 119 47 0 12 130 7 125 2.83e-50 168
Msa0411830 MtrunA17_Chr7g0217221 62.069 116 44 0 1 116 1 116 6.10e-50 167
Msa0411830 MtrunA17_Chr4g0054391 68.182 110 34 1 1 109 1 110 6.52e-50 167
Msa0411830 MtrunA17_Chr7g0275911 61.207 116 45 0 1 116 1 116 3.93e-49 164
Msa0411830 MtrunA17_Chr7g0254411 60.000 125 48 1 1 123 1 125 4.73e-49 167
Msa0411830 MtrunA17_Chr3g0092401 62.931 116 43 0 1 116 2 117 4.92e-49 166
Msa0411830 MtrunA17_Chr7g0274581 62.069 116 44 0 1 116 1 116 9.31e-49 162
Msa0411830 MtrunA17_Chr7g0261281 62.069 116 44 0 1 116 1 116 1.97e-48 163
Msa0411830 MtrunA17_Chr2g0311221 64.220 109 39 0 2 110 4 112 4.36e-48 164
Msa0411830 MtrunA17_Chr2g0330041 57.576 132 56 0 1 132 1 132 8.15e-48 165
Msa0411830 MtrunA17_Chr6g0453211 62.727 110 41 0 1 110 1 110 1.25e-47 162
Msa0411830 MtrunA17_Chr8g0387421 60.345 116 46 0 1 116 1 116 1.58e-47 162
Msa0411830 MtrunA17_Chr8g0342521 60.163 123 49 0 1 123 1 123 2.50e-47 162
Msa0411830 MtrunA17_Chr4g0022901 59.483 116 46 1 1 115 1 116 2.90e-47 160
Msa0411830 MtrunA17_Chr8g0342541 60.976 123 48 0 1 123 1 123 4.53e-47 162
Msa0411830 MtrunA17_Chr8g0346561 58.621 116 48 0 1 116 1 116 7.53e-47 160
Msa0411830 MtrunA17_Chr4g0022931 58.120 117 48 1 1 116 1 117 8.90e-47 159
Msa0411830 MtrunA17_Chr4g0022911 57.759 116 48 1 1 115 1 116 2.14e-46 158
Msa0411830 MtrunA17_Chr4g0072751 63.063 111 40 1 1 110 1 111 2.78e-46 160
Msa0411830 MtrunA17_Chr4g0044421 58.400 125 51 1 3 126 2 126 3.38e-46 155
Msa0411830 MtrunA17_Chr4g0022891 58.407 113 47 0 1 113 1 113 3.50e-45 154
Msa0411830 MtrunA17_Chr6g0487491 60.484 124 40 2 1 115 1 124 4.24e-45 154
Msa0411830 MtrunA17_Chr7g0269831 62.069 116 44 0 1 116 1 116 5.08e-45 157
Msa0411830 MtrunA17_Chr8g0342481 62.393 117 43 1 1 116 1 117 1.39e-44 157
Msa0411830 MtrunA17_Chr5g0397231 60.000 110 44 0 1 110 1 110 1.43e-44 155
Msa0411830 MtrunA17_Chr4g0055981 56.410 117 51 0 9 125 52 168 1.38e-43 149
Msa0411830 MtrunA17_Chr4g0032401 59.459 111 45 0 12 122 17 127 1.74e-43 152
Msa0411830 MtrunA17_Chr2g0328771 58.333 108 45 0 12 119 20 127 6.12e-43 150
Msa0411830 MtrunA17_Chr3g0088461 62.037 108 41 0 9 116 19 126 1.99e-42 149
Msa0411830 MtrunA17_Chr4g0022881 55.263 114 51 0 1 114 1 114 2.77e-42 146
Msa0411830 MtrunA17_Chr6g0470971 59.633 109 44 0 7 115 9 117 1.03e-41 146
Msa0411830 MtrunA17_Chr8g0343831 59.048 105 43 0 12 116 8 112 1.83e-41 144
Msa0411830 MtrunA17_Chr1g0203441 50.365 137 67 1 13 149 14 149 2.22e-41 145
Msa0411830 MtrunA17_Chr7g0247131 62.637 91 34 0 44 134 10 100 3.40e-39 139
Msa0411830 MtrunA17_Chr3g0099131 58.095 105 44 0 11 115 40 144 5.27e-39 144
Msa0411830 MtrunA17_Chr1g0209661 52.174 115 55 0 8 122 23 137 1.06e-38 139
Msa0411830 MtrunA17_Chr7g0240821 58.491 106 44 0 17 122 6 111 3.89e-38 135
Msa0411830 MtrunA17_Chr5g0440781 50.435 115 55 2 11 124 11 124 2.22e-37 132
Msa0411830 MtrunA17_Chr1g0186061 54.545 110 50 0 6 115 14 123 3.93e-37 133
Msa0411830 MtrunA17_Chr5g0434911 53.636 110 51 0 7 116 16 125 4.20e-37 134
Msa0411830 MtrunA17_Chr5g0434831 57.143 105 45 0 12 116 7 111 4.80e-37 131
Msa0411830 MtrunA17_Chr7g0220341 57.944 107 43 1 12 116 25 131 6.06e-37 133
Msa0411830 MtrunA17_Chr5g0440761 50.877 114 54 2 11 123 11 123 7.90e-37 133
Msa0411830 MtrunA17_Chr4g0042611 63.636 88 32 0 1 88 1 88 8.37e-37 127
Msa0411830 MtrunA17_Chr3g0080861 53.982 113 51 1 12 123 37 149 9.24e-37 138
Msa0411830 MtrunA17_Chr5g0434931 55.238 105 47 0 12 116 35 139 9.82e-37 133
Msa0411830 MtrunA17_Chr5g0441141 50.435 115 55 2 11 124 11 124 1.16e-36 132
Msa0411830 MtrunA17_Chr1g0180391 54.717 106 48 0 11 116 18 123 1.35e-36 131
Msa0411830 MtrunA17_Chr2g0322521 56.731 104 45 0 12 115 29 132 2.12e-36 135
Msa0411830 MtrunA17_Chr7g0228231 53.774 106 49 0 11 116 13 118 2.18e-36 130
Msa0411830 MtrunA17_Chr3g0093811 65.217 92 32 0 44 135 14 105 2.75e-36 131
Msa0411830 MtrunA17_Chr2g0294811 59.783 92 37 0 1 92 1 92 3.78e-36 126
Msa0411830 MtrunA17_Chr6g0450101 50.847 118 56 1 1 116 1 118 1.59e-35 127
Msa0411830 MtrunA17_Chr1g0194291 48.800 125 63 1 12 136 21 144 2.17e-35 129
Msa0411830 MtrunA17_Chr8g0354661 53.846 104 48 0 12 115 37 140 2.34e-35 134
Msa0411830 MtrunA17_Chr2g0327821 52.336 107 51 0 9 115 3 109 3.66e-35 127
Msa0411830 MtrunA17_Chr1g0168661 52.727 110 52 0 6 115 15 124 3.91e-35 128
Msa0411830 MtrunA17_Chr1g0194301 50.450 111 55 0 12 122 33 143 4.40e-35 128
Msa0411830 MtrunA17_Chr5g0434841 54.286 105 48 0 12 116 20 124 5.77e-35 129
Msa0411830 MtrunA17_Chr8g0360111 55.446 101 45 0 12 112 25 125 6.09e-35 127
Msa0411830 MtrunA17_Chr7g0228991 54.286 105 48 0 12 116 29 133 2.63e-34 126
Msa0411830 MtrunA17_Chr4g0030881 50.909 110 47 1 13 115 8 117 1.84e-33 124
Msa0411830 MtrunA17_Chr5g0401731 48.361 122 61 2 8 129 10 129 1.86e-33 125
Msa0411830 MtrunA17_Chr5g0441131 49.565 115 56 2 11 124 8 121 2.81e-33 121
Msa0411830 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 5.83e-33 117
Msa0411830 MtrunA17_Chr4g0068921 47.619 126 65 1 11 136 23 147 8.17e-33 120
Msa0411830 MtrunA17_Chr1g0154031 51.923 104 50 0 12 115 76 179 8.48e-33 125
Msa0411830 MtrunA17_Chr2g0293911 49.593 123 61 1 11 133 23 144 1.02e-32 123
Msa0411830 MtrunA17_Chr2g0323321 55.435 92 40 1 1 92 1 91 1.33e-32 117
Msa0411830 MtrunA17_Chr8g0342531 61.905 84 32 0 6 89 6 89 6.77e-32 117
Msa0411830 MtrunA17_Chr4g0008551 42.254 142 77 2 14 155 38 174 1.16e-31 121
Msa0411830 MtrunA17_Chr3g0133601 44.444 144 59 4 14 143 37 173 1.25e-31 118
Msa0411830 MtrunA17_Chr8g0342461 58.889 90 36 1 1 89 1 90 1.42e-31 115
Msa0411830 MtrunA17_Chr6g0454921 40.132 152 86 3 8 159 10 156 2.48e-31 117
Msa0411830 MtrunA17_Chr8g0342471 58.889 90 36 1 1 89 1 90 4.39e-31 114
Msa0411830 MtrunA17_Chr1g0192411 46.281 121 64 1 12 131 12 132 5.63e-31 120
Msa0411830 MtrunA17_Chr4g0053431 50.962 104 50 1 14 117 5 107 9.99e-31 117
Msa0411830 MtrunA17_Chr8g0334881 48.148 108 55 1 8 114 6 113 3.24e-30 116
Msa0411830 MtrunA17_Chr5g0395221 56.818 88 38 0 1 88 1 88 3.33e-30 110
Msa0411830 MtrunA17_Chr3g0099141 57.143 84 36 0 11 94 39 122 2.85e-29 109
Msa0411830 MtrunA17_Chr4g0013361 48.148 108 55 1 8 114 6 113 4.72e-29 113
Msa0411830 MtrunA17_Chr4g0042501 48.039 102 52 1 14 115 105 205 2.63e-27 110
Msa0411830 MtrunA17_Chr5g0429661 47.115 104 54 1 14 117 122 224 5.42e-26 105
Msa0411830 MtrunA17_Chr5g0417621 46.078 102 54 1 14 115 134 234 5.88e-26 107
Msa0411830 MtrunA17_Chr3g0117511 44.545 110 60 1 8 117 177 285 8.98e-26 106
Msa0411830 MtrunA17_Chr5g0425591 50.000 86 42 1 11 95 8 93 1.09e-25 98.6
Msa0411830 MtrunA17_Chr7g0238631 48.544 103 52 1 14 116 113 214 1.13e-25 107
Msa0411830 MtrunA17_Chr4g0058991 45.794 107 55 2 12 117 207 311 1.54e-25 106
Msa0411830 MtrunA17_Chr6g0480581 45.545 101 54 1 14 114 4 103 1.76e-25 102
Msa0411830 MtrunA17_Chr5g0437321 37.037 162 94 5 10 166 16 174 2.31e-25 103
Msa0411830 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 4 73 1.92e-24 98.6
Msa0411830 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 2.69e-24 95.5
Msa0411830 MtrunA17_Chr7g0254261 46.078 102 54 1 14 115 89 189 4.93e-24 100
Msa0411830 MtrunA17_Chr7g0229131 57.534 73 31 0 44 116 4 76 6.68e-24 96.3
Msa0411830 MtrunA17_Chr3g0125801 47.573 103 51 2 14 115 16 116 3.00e-23 97.4
Msa0411830 MtrunA17_Chr6g0460661 44.898 98 51 2 14 110 16 111 6.24e-23 93.2
Msa0411830 MtrunA17_Chr7g0238651 35.252 139 82 3 10 140 3 141 9.98e-23 97.1
Msa0411830 MtrunA17_Chr7g0228531 44.248 113 56 3 11 118 217 327 1.26e-22 97.4
Msa0411830 MtrunA17_Chr3g0139671 39.806 103 61 1 14 116 85 186 1.58e-21 95.5
Msa0411830 MtrunA17_Chr1g0157731 32.680 153 83 3 14 159 91 230 3.67e-21 94.4
Msa0411830 MtrunA17_Chr6g0453751 47.312 93 40 3 12 95 20 112 4.17e-21 87.4
Msa0411830 MtrunA17_Chr6g0460671 31.683 202 108 5 14 208 99 277 4.44e-21 92.4
Msa0411830 MtrunA17_Chr5g0397841 44.000 100 54 2 10 109 107 204 2.85e-20 91.3
Msa0411830 MtrunA17_Chr7g0228481 42.478 113 58 3 11 118 217 327 3.70e-20 90.5
Msa0411830 MtrunA17_Chr8g0362231 32.778 180 110 4 17 187 25 202 8.53e-19 86.7
Msa0411830 MtrunA17_Chr5g0416341 42.424 99 56 1 17 115 29 126 2.84e-18 85.1
Msa0411830 MtrunA17_Chr7g0228401 41.860 86 49 1 25 110 290 374 7.36e-17 81.3
Msa0411830 MtrunA17_Chr1g0177901 29.375 160 94 4 48 189 27 185 2.72e-16 76.3
Msa0411830 MtrunA17_Chr1g0193901 48.276 87 43 2 12 96 11 97 3.84e-16 73.2
Msa0411830 MtrunA17_Chr1g0193891 48.276 87 43 2 12 96 11 97 3.84e-16 73.2
Msa0411830 MtrunA17_Chr1g0193871 48.276 87 43 2 12 96 11 97 3.84e-16 73.2
Msa0411830 MtrunA17_Chr1g0193881 48.276 87 43 2 12 96 11 97 3.84e-16 73.2
Msa0411830 MtrunA17_Chr7g0233061 35.780 109 64 3 11 116 177 282 6.23e-16 77.8
Msa0411830 MtrunA17_Chr5g0395231 62.745 51 19 0 78 128 5 55 3.65e-14 71.2
Msa0411830 MtrunA17_Chr4g0042621 75.000 40 10 0 89 128 15 54 1.56e-13 70.5
Msa0411830 MtrunA17_Chr5g0434871 65.116 43 15 0 74 116 2 44 2.08e-13 64.7
Msa0411830 MtrunA17_Chr3g0145551 61.538 39 15 0 91 129 1 39 2.63e-11 59.3
Msa0411830 MtrunA17_Chr5g0434891 68.421 38 12 0 78 115 2 39 4.63e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411830 AT5G56110.1 55.488 328 132 4 1 322 1 320 2.96e-115 336
Msa0411830 AT4G21440.1 65.957 141 47 1 1 141 1 140 2.60e-64 207
Msa0411830 AT4G05100.1 70.543 129 37 1 1 128 1 129 8.33e-64 205
Msa0411830 AT4G28110.1 69.531 128 39 0 1 128 1 128 1.10e-63 203
Msa0411830 AT5G15310.4 47.945 219 99 3 1 204 1 219 3.10e-62 198
Msa0411830 AT3G28470.1 71.324 136 39 0 1 136 1 136 6.84e-62 199
Msa0411830 AT4G17785.2 63.504 137 49 1 1 136 1 137 3.23e-61 199
Msa0411830 AT4G17785.1 63.504 137 49 1 1 136 1 137 3.70e-61 199
Msa0411830 AT5G15310.1 49.048 210 97 3 1 200 1 210 4.14e-61 198
Msa0411830 AT5G15310.2 56.395 172 66 2 1 163 1 172 5.92e-61 197
Msa0411830 AT3G01140.2 54.651 172 69 1 1 163 1 172 6.41e-61 198
Msa0411830 AT1G35515.1 58.599 157 61 1 1 157 1 153 8.52e-61 193
Msa0411830 AT5G16770.4 65.625 128 44 0 1 128 1 128 8.92e-61 197
Msa0411830 AT5G16770.3 65.625 128 44 0 1 128 1 128 8.92e-61 197
Msa0411830 AT3G02940.2 65.625 128 44 0 1 128 1 128 1.22e-60 196
Msa0411830 AT1G34670.1 63.121 141 52 0 1 141 1 141 1.22e-60 198
Msa0411830 AT3G02940.1 65.625 128 44 0 1 128 1 128 1.82e-60 196
Msa0411830 AT3G02940.3 65.625 128 44 0 1 128 1 128 1.82e-60 196
Msa0411830 AT5G16770.1 65.625 128 44 0 1 128 1 128 2.05e-60 196
Msa0411830 AT5G16770.2 65.625 128 44 0 1 128 1 128 2.05e-60 196
Msa0411830 AT5G10280.1 59.574 141 57 0 1 141 1 141 2.26e-59 194
Msa0411830 AT4G34990.1 64.615 130 46 0 1 130 1 130 3.71e-59 191
Msa0411830 AT4G09460.1 58.333 144 60 0 1 144 1 144 6.12e-59 189
Msa0411830 AT3G61250.1 56.954 151 62 2 1 150 1 149 2.16e-58 190
Msa0411830 AT1G66230.1 63.704 135 49 0 1 135 1 135 2.38e-58 189
Msa0411830 AT3G01140.1 54.167 168 68 1 5 163 48 215 4.06e-58 192
Msa0411830 AT2G16720.1 63.780 127 46 0 1 127 1 127 5.15e-58 188
Msa0411830 AT4G12350.1 48.958 192 93 2 1 187 1 192 5.92e-58 189
Msa0411830 AT4G38620.1 61.240 129 50 0 1 129 1 129 3.21e-57 186
Msa0411830 AT5G14340.1 61.364 132 51 0 1 132 13 144 3.36e-57 186
Msa0411830 AT4G01680.3 63.768 138 46 1 1 138 1 134 6.20e-57 184
Msa0411830 AT5G65230.1 63.281 128 47 0 1 128 1 128 2.59e-56 185
Msa0411830 AT5G60890.1 59.690 129 52 0 1 129 1 129 2.62e-56 184
Msa0411830 AT5G54230.1 63.910 133 48 0 1 133 1 133 2.79e-56 185
Msa0411830 AT4G22680.1 59.441 143 58 0 1 143 1 143 2.91e-56 184
Msa0411830 AT1G22640.1 62.205 127 48 0 1 127 1 127 4.75e-56 182
Msa0411830 AT4G01680.1 63.768 138 46 1 1 138 1 134 5.12e-56 185
Msa0411830 AT1G57560.1 61.481 135 52 0 1 135 1 135 7.59e-56 184
Msa0411830 AT5G61420.2 62.308 130 49 0 1 130 1 130 1.16e-55 185
Msa0411830 AT1G57560.2 63.077 130 48 0 1 130 1 130 1.42e-55 182
Msa0411830 AT5G16600.1 63.846 130 47 0 1 130 1 130 1.78e-55 183
Msa0411830 AT5G07690.1 61.832 131 50 0 1 131 1 131 1.93e-55 184
Msa0411830 AT5G26660.1 63.566 129 47 0 1 129 1 129 4.94e-55 183
Msa0411830 AT1G09540.1 62.879 132 49 0 1 132 1 132 1.15e-54 182
Msa0411830 AT1G18570.1 59.542 131 52 1 1 130 1 131 4.90e-54 180
Msa0411830 AT5G07700.1 62.308 130 49 0 1 130 1 130 1.48e-53 179
Msa0411830 AT5G07700.2 62.308 130 49 0 1 130 1 130 1.48e-53 179
Msa0411830 AT2G31180.1 68.376 117 37 0 1 117 1 117 1.91e-53 176
Msa0411830 AT1G74080.1 58.140 129 54 0 1 129 1 129 3.77e-53 177
Msa0411830 AT2G47460.1 56.164 146 64 0 1 146 1 146 4.57e-53 178
Msa0411830 AT3G23250.1 65.517 116 40 0 1 116 1 116 4.94e-53 176
Msa0411830 AT4G01680.2 58.667 150 46 2 1 138 1 146 1.37e-52 176
Msa0411830 AT1G18710.1 57.364 129 55 0 1 129 1 129 1.88e-52 174
Msa0411830 AT1G74430.1 58.594 128 53 0 1 128 1 128 2.16e-52 174
Msa0411830 AT5G57620.1 65.546 119 40 1 1 118 1 119 3.02e-52 175
Msa0411830 AT1G79180.1 62.205 127 45 1 2 125 4 130 3.79e-52 174
Msa0411830 AT3G49690.1 66.667 117 38 1 1 116 1 117 9.14e-52 173
Msa0411830 AT3G13540.1 60.800 125 49 0 5 129 16 140 4.19e-51 170
Msa0411830 AT5G62470.2 65.517 116 40 0 1 116 1 116 5.91e-51 172
Msa0411830 AT1G16490.1 65.517 116 40 0 2 117 4 119 6.30e-51 170
Msa0411830 AT1G74650.1 64.706 119 42 0 1 119 1 119 8.40e-51 171
Msa0411830 AT3G12720.1 61.983 121 46 0 6 126 16 136 8.85e-51 171
Msa0411830 AT5G65790.1 64.957 117 40 1 1 116 1 117 1.37e-50 172
Msa0411830 AT5G62320.1 56.204 137 53 1 2 131 3 139 1.99e-50 168
Msa0411830 AT2G36890.1 54.248 153 49 2 1 152 1 133 2.33e-50 169
Msa0411830 AT1G06180.1 64.655 116 41 0 1 116 1 116 3.29e-50 167
Msa0411830 AT2G36890.2 54.248 153 49 2 1 152 42 174 4.64e-50 170
Msa0411830 AT5G23000.1 64.103 117 41 1 1 116 1 117 5.94e-50 169
Msa0411830 AT5G49330.1 63.793 116 42 0 1 116 1 116 6.31e-50 169
Msa0411830 AT3G47600.1 62.185 119 45 0 1 119 1 119 1.01e-49 169
Msa0411830 AT3G62610.1 62.712 118 44 0 1 118 1 118 1.08e-49 169
Msa0411830 AT4G37780.1 63.248 117 42 1 1 116 1 117 1.86e-49 167
Msa0411830 AT5G62470.1 65.517 116 39 1 1 116 1 115 4.05e-49 167
Msa0411830 AT3G28910.1 60.656 122 48 0 1 122 1 122 9.05e-49 166
Msa0411830 AT1G56160.1 62.069 116 44 0 2 117 4 119 1.69e-48 164
Msa0411830 AT1G08810.1 61.538 117 45 0 1 117 1 117 4.75e-48 163
Msa0411830 AT3G13890.2 63.793 116 42 0 1 116 1 116 7.86e-48 164
Msa0411830 AT3G12820.1 61.404 114 44 0 3 116 5 118 9.06e-47 158
Msa0411830 AT1G63910.1 60.345 116 46 0 1 116 1 116 2.42e-46 161
Msa0411830 AT1G79180.2 50.000 160 44 2 2 125 4 163 5.45e-46 159
Msa0411830 AT3G13890.1 59.200 125 42 1 1 116 1 125 1.01e-44 156
Msa0411830 AT5G12870.1 62.037 108 41 0 12 119 18 125 5.44e-44 152
Msa0411830 AT5G35550.1 57.407 108 46 0 9 116 11 118 4.11e-42 147
Msa0411830 AT3G27920.1 58.407 113 45 1 8 118 8 120 5.34e-42 145
Msa0411830 AT5G52600.1 54.264 129 50 1 9 128 9 137 3.55e-41 142
Msa0411830 AT5G40330.1 59.259 108 43 1 13 120 13 119 5.72e-41 142
Msa0411830 AT5G14750.1 59.615 104 42 0 13 116 17 120 1.07e-40 141
Msa0411830 AT3G08500.1 60.185 108 43 0 9 116 27 134 1.01e-39 143
Msa0411830 AT3G27810.1 43.373 166 86 3 12 177 20 177 3.37e-39 138
Msa0411830 AT5G55020.1 53.982 113 51 1 12 123 26 138 2.49e-38 142
Msa0411830 AT1G25340.1 51.304 115 56 0 13 127 19 133 3.95e-38 137
Msa0411830 AT2G32460.1 53.704 108 50 0 8 115 14 121 6.61e-38 141
Msa0411830 AT2G26960.1 52.212 113 53 1 9 121 17 128 7.12e-38 140
Msa0411830 AT2G32460.2 54.808 104 47 0 12 115 6 109 7.94e-38 140
Msa0411830 AT5G26660.2 67.778 90 29 0 40 129 9 98 8.03e-38 137
Msa0411830 AT5G40350.1 50.000 128 64 0 12 139 17 144 3.47e-37 132
Msa0411830 AT1G48000.1 47.552 143 69 3 12 149 32 173 4.09e-37 133
Msa0411830 AT5G06100.1 53.097 113 52 1 12 123 32 144 8.42e-37 137
Msa0411830 AT4G26930.1 48.760 121 61 1 12 131 19 139 1.15e-36 135
Msa0411830 AT5G52260.1 58.879 107 44 0 9 115 9 115 1.29e-36 132
Msa0411830 AT5G06100.5 55.769 104 46 0 12 115 32 135 2.38e-36 137
Msa0411830 AT5G06100.2 55.769 104 46 0 12 115 32 135 2.38e-36 137
Msa0411830 AT5G06100.3 55.769 104 46 0 12 115 32 135 2.38e-36 137
Msa0411830 AT5G06100.4 55.769 104 46 0 12 115 32 135 2.38e-36 137
Msa0411830 AT4G25560.1 58.252 103 43 0 13 115 11 113 3.32e-36 132
Msa0411830 AT3G48920.1 53.211 109 51 0 9 117 15 123 4.26e-36 131
Msa0411830 AT3G11440.2 53.846 104 48 0 12 115 41 144 5.88e-36 135
Msa0411830 AT2G47190.1 46.512 129 68 1 8 136 16 143 7.82e-36 130
Msa0411830 AT3G01530.1 51.376 109 53 0 8 116 21 129 1.35e-35 128
Msa0411830 AT1G68320.1 48.333 120 62 0 10 129 17 136 1.97e-35 130
Msa0411830 AT3G11440.3 53.846 104 48 0 12 115 41 144 2.18e-35 135
Msa0411830 AT3G11440.4 53.846 104 48 0 12 115 41 144 2.18e-35 135
Msa0411830 AT3G11440.1 53.846 104 48 0 12 115 41 144 2.18e-35 135
Msa0411830 AT4G13480.1 57.282 103 44 0 13 115 7 109 3.12e-35 129
Msa0411830 AT3G24310.1 56.311 103 45 0 13 115 19 121 5.76e-35 128
Msa0411830 AT3G30210.1 55.882 102 45 0 13 114 28 129 2.04e-34 127
Msa0411830 AT1G18960.1 51.261 119 55 2 17 135 13 128 3.35e-34 127
Msa0411830 AT1G66370.1 52.885 104 49 0 12 115 8 111 2.21e-33 123
Msa0411830 AT1G25340.2 48.696 115 54 1 13 127 19 128 2.78e-33 124
Msa0411830 AT3G06490.1 50.000 126 62 1 11 136 18 142 3.37e-33 125
Msa0411830 AT1G25340.3 48.696 115 54 1 13 127 19 128 4.52e-33 124
Msa0411830 AT1G66380.1 46.970 132 60 1 12 143 8 129 6.22e-33 119
Msa0411830 AT3G60460.1 51.376 109 52 1 7 114 6 114 7.29e-33 124
Msa0411830 AT5G59780.3 48.598 107 55 0 9 115 5 111 2.12e-32 120
Msa0411830 AT2G26950.1 46.018 113 60 1 9 121 13 124 2.44e-32 124
Msa0411830 AT5G49620.1 43.537 147 79 2 8 154 22 164 3.85e-32 122
Msa0411830 AT3G46130.1 51.456 103 50 0 13 115 10 112 4.35e-32 120
Msa0411830 AT3G53200.1 50.467 107 53 0 9 115 6 112 5.68e-32 119
Msa0411830 AT2G23290.1 52.727 110 50 2 8 117 8 115 3.84e-31 119
Msa0411830 AT5G35550.2 66.667 72 24 0 45 116 50 121 4.55e-31 118
Msa0411830 AT1G66390.1 54.808 104 47 0 12 115 8 111 5.34e-31 117
Msa0411830 AT4G37260.1 51.923 104 49 1 14 117 13 115 5.50e-31 119
Msa0411830 AT1G56650.1 54.808 104 47 0 12 115 8 111 8.35e-31 117
Msa0411830 AT5G67300.1 51.429 105 50 1 14 118 6 109 2.12e-30 117
Msa0411830 AT3G50060.1 52.294 109 50 2 10 118 3 109 2.93e-29 114
Msa0411830 AT5G14750.3 66.667 69 23 0 48 116 18 86 7.11e-29 109
Msa0411830 AT2G39880.1 43.262 141 70 3 14 152 50 182 1.56e-28 113
Msa0411830 AT3G09230.1 47.222 108 55 2 9 116 51 156 1.57e-28 114
Msa0411830 AT3G27810.2 40.580 138 76 2 45 182 4 135 1.64e-28 108
Msa0411830 AT3G47600.2 64.000 75 27 0 45 119 39 113 1.70e-28 112
Msa0411830 AT5G49620.2 39.752 161 79 3 8 154 22 178 1.89e-28 112
Msa0411830 AT1G69560.2 46.789 109 55 2 9 116 118 224 1.02e-27 110
Msa0411830 AT1G69560.1 46.789 109 55 2 9 116 102 208 1.03e-27 110
Msa0411830 AT3G12820.2 66.667 69 23 0 48 116 2 70 1.30e-27 107
Msa0411830 AT1G71030.2 58.025 81 34 0 51 131 5 85 1.40e-27 106
Msa0411830 AT1G71030.1 55.682 88 38 1 44 131 13 99 1.88e-27 106
Msa0411830 AT5G40350.2 50.515 97 48 0 43 139 3 99 3.40e-27 105
Msa0411830 AT3G55730.1 48.113 106 54 1 14 119 56 160 3.83e-27 110
Msa0411830 AT1G22640.3 62.319 69 26 0 59 127 2 70 1.15e-26 104
Msa0411830 AT5G40360.1 44.860 107 58 1 8 114 152 257 1.40e-26 108
Msa0411830 AT5G58850.1 46.729 107 56 1 11 117 102 207 1.62e-26 108
Msa0411830 AT3G27785.1 46.847 111 56 2 8 117 183 291 1.75e-26 108
Msa0411830 AT5G11050.1 44.860 107 58 1 11 117 102 207 6.78e-26 107
Msa0411830 AT5G17800.1 48.039 102 52 1 14 115 93 193 1.38e-25 104
Msa0411830 AT1G26780.1 46.602 103 52 2 14 115 98 198 2.10e-25 103
Msa0411830 AT1G26780.2 46.602 103 52 2 14 115 98 198 3.16e-25 104
Msa0411830 AT5G59780.2 52.809 89 37 1 27 115 7 90 4.10e-25 100
Msa0411830 AT1G17950.1 33.803 213 114 6 14 224 5 192 7.27e-25 101
Msa0411830 AT4G18770.1 41.818 110 63 1 8 117 211 319 1.41e-24 103
Msa0411830 AT3G53200.2 60.563 71 28 0 45 115 9 79 1.44e-24 99.4
Msa0411830 AT4G33450.1 42.593 108 61 1 8 115 13 119 2.67e-24 99.8
Msa0411830 AT3G46130.3 58.333 72 30 0 44 115 9 80 2.77e-24 99.0
Msa0411830 AT1G66380.3 64.789 71 25 0 45 115 8 78 3.26e-24 95.1
Msa0411830 AT3G46130.4 59.155 71 29 0 45 115 20 90 5.57e-24 98.6
Msa0411830 AT5G02320.1 44.660 103 56 1 14 116 127 228 9.26e-24 102
Msa0411830 AT5G02320.2 44.660 103 56 1 14 116 127 228 9.26e-24 102
Msa0411830 AT5G02320.3 44.660 103 56 1 14 116 67 168 1.25e-23 101
Msa0411830 AT1G73410.2 47.573 103 51 2 14 115 6 106 3.10e-23 95.5
Msa0411830 AT1G73410.1 47.573 103 51 2 14 115 6 106 4.11e-23 96.3
Msa0411830 AT3G29020.1 42.718 103 58 1 14 116 65 166 5.30e-23 95.9
Msa0411830 AT3G29020.2 42.718 103 58 1 14 116 67 168 1.11e-22 96.3
Msa0411830 AT4G32730.5 39.806 103 61 1 14 116 87 188 3.78e-22 97.8
Msa0411830 AT4G32730.4 39.806 103 61 1 14 116 87 188 3.78e-22 97.8
Msa0411830 AT4G32730.3 39.806 103 61 1 14 116 87 188 3.78e-22 97.8
Msa0411830 AT4G32730.2 39.806 103 61 1 14 116 87 188 3.78e-22 97.8
Msa0411830 AT4G32730.1 39.806 103 61 1 14 116 87 188 4.32e-22 97.4
Msa0411830 AT3G09370.2 44.118 102 56 1 14 115 135 235 4.72e-22 97.1
Msa0411830 AT3G09370.1 44.118 102 56 1 14 115 130 230 5.34e-22 96.7
Msa0411830 AT3G09370.3 44.118 102 56 1 14 115 143 243 5.48e-22 96.7
Msa0411830 AT2G25230.1 38.333 120 71 2 7 124 19 137 5.89e-22 92.8
Msa0411830 AT5G11510.3 39.806 103 61 1 14 116 81 182 9.19e-21 93.6
Msa0411830 AT5G11510.1 39.806 103 61 1 14 116 81 182 9.19e-21 93.6
Msa0411830 AT5G11510.4 39.806 103 61 1 14 116 81 182 9.19e-21 93.6
Msa0411830 AT5G11510.5 39.806 103 61 1 14 116 81 182 1.19e-20 93.2
Msa0411830 AT5G11510.2 39.806 103 61 1 14 116 81 182 1.27e-20 93.2
Msa0411830 AT2G37630.1 32.353 136 85 2 13 141 3 138 1.30e-20 91.7
Msa0411830 AT3G23250.2 62.069 58 22 0 59 116 2 59 4.49e-20 87.8
Msa0411830 AT5G14750.4 62.069 58 22 0 59 116 2 59 5.27e-20 85.1
Msa0411830 AT5G14750.2 62.069 58 22 0 59 116 2 59 5.27e-20 85.1
Msa0411830 AT5G39700.1 40.000 100 59 1 15 114 57 155 1.17e-18 82.8
Msa0411830 AT5G40430.1 33.835 133 84 3 7 137 47 177 1.19e-18 84.3
Msa0411830 AT1G66380.2 45.783 83 45 0 12 94 8 90 2.78e-18 79.3
Msa0411830 AT2G02820.3 41.414 99 57 1 17 115 33 130 6.01e-18 83.6
Msa0411830 AT2G02820.1 41.414 99 57 1 17 115 33 130 1.02e-17 84.0
Msa0411830 AT2G02820.2 41.414 99 57 1 17 115 33 130 1.04e-17 84.0
Msa0411830 AT1G14350.2 42.424 99 56 1 17 115 28 125 2.01e-17 82.8
Msa0411830 AT1G14350.1 42.424 99 56 1 17 115 28 125 2.01e-17 82.8
Msa0411830 AT4G00540.2 38.532 109 63 2 11 116 100 207 4.90e-16 78.6
Msa0411830 AT4G00540.1 38.532 109 63 2 11 116 98 205 7.26e-16 78.2
Msa0411830 AT5G61420.1 64.000 50 18 0 81 130 2 51 1.56e-15 75.9
Msa0411830 AT4G28110.2 70.732 41 12 0 88 128 4 44 1.09e-14 72.0
Msa0411830 AT5G15310.3 68.889 45 14 0 84 128 5 49 1.81e-14 72.4
Msa0411830 AT5G14340.2 54.717 53 23 1 81 132 2 54 6.10e-14 69.7
Msa0411830 AT1G74430.2 55.769 52 23 0 77 128 8 59 2.64e-13 68.2
Msa0411830 AT1G22640.2 65.000 40 14 0 88 127 16 55 2.81e-12 65.1
Msa0411830 AT5G59780.1 57.143 42 18 0 74 115 5 46 3.69e-11 61.6
Msa0411830 AT4G25560.2 58.696 46 19 0 70 115 2 47 3.80e-11 62.4
Msa0411830 AT3G28910.2 60.000 45 18 0 78 122 2 46 4.95e-11 62.4
Msa0411830 AT3G46130.2 57.143 42 18 0 74 115 5 46 6.00e-11 61.2

Find 91 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCTTACAGTTAAAGTAAT+TGG 0.210250 3_2:-54386018 None:intergenic
CAAGCCATTCTCCCATTTAA+TGG 0.217063 3_2:+54385842 Msa0411830:CDS
TAGCAATTTCAGCCATTAAA+TGG 0.223128 3_2:-54385854 None:intergenic
ACAGCATCTTCTCTTTCTTC+TGG 0.260623 3_2:-54386038 None:intergenic
CAATTCAGCCCATCATGTTT+TGG 0.275499 3_2:+54386194 Msa0411830:CDS
TGTTGGCCCTGGTAGTTAAT+TGG 0.282501 3_2:-54385966 None:intergenic
CTCAACATGGCACTCGCAAC+TGG 0.327158 3_2:+54385357 Msa0411830:CDS
GAAGGACTAACCAGCATTCT+TGG 0.330007 3_2:-54385390 None:intergenic
CTGGTAGTTAATTGGCTTCC+TGG 0.331694 3_2:-54385958 None:intergenic
CATTTCGTGTTCTTGTTGTA+TGG 0.337306 3_2:-54386090 None:intergenic
AATGTTTACCCTACAATGTC+TGG 0.342765 3_2:+54386167 Msa0411830:CDS
ACAGTCTGAGTTGAATATAT+TGG 0.366444 3_2:-54386363 None:intergenic
GATTAAGTTTGACCTATCTA+AGG 0.367315 3_2:+54386067 Msa0411830:CDS
GCCTCCCAAGGTTTATTTGT+GGG 0.378007 3_2:-54386116 None:intergenic
GAGAATGGCTTGTGGGTGAC+AGG 0.403681 3_2:-54385831 None:intergenic
GCTCTTCTCCATCCGAGAAA+TGG 0.404593 3_2:-54385565 None:intergenic
CTTGTTGTATGGCCTTAGAT+AGG 0.418669 3_2:-54386079 None:intergenic
TATAATATTTCTTATACCAT+AGG 0.421907 3_2:-54386422 Msa0411840:three_prime_UTR
CCAACATTCTAATGAAGCTC+TGG 0.425128 3_2:+54385983 Msa0411830:CDS
GAGAGCTTGTTGTCTTCCTC+AGG 0.425801 3_2:-54385323 None:intergenic
AAATGGCCATGTTTCAGATC+AGG 0.429618 3_2:-54385548 None:intergenic
CTGATAGCAGCGCAGCTGCC+AGG 0.436902 3_2:+54385735 Msa0411830:CDS
TCAGCCATTAAATGGGAGAA+TGG 0.437379 3_2:-54385846 None:intergenic
TCTGAAACATGGCCATTTCT+CGG 0.444221 3_2:+54385553 Msa0411830:CDS
CCTTTATTGCCAAAACATGA+TGG 0.447943 3_2:-54386203 None:intergenic
TGCTTCCAGTACATAAACTT+TGG 0.463807 3_2:-54386244 None:intergenic
ATTGTAGGGTAAACATTGTA+TGG 0.467777 3_2:-54386161 None:intergenic
ATAATATTTCTTATACCATA+GGG 0.469555 3_2:-54386421 Msa0411840:three_prime_UTR
ACATCATTGTCGGTGCGTCC+TGG 0.471385 3_2:-54385753 None:intergenic
AGCAATTTCAGCCATTAAAT+GGG 0.472879 3_2:-54385853 None:intergenic
CCAGAGCTTCATTAGAATGT+TGG 0.479076 3_2:-54385983 None:intergenic
CTTGCAGTTGTTGCCTCCCA+AGG 0.479313 3_2:-54386128 None:intergenic
AAGGACTAACCAGCATTCTT+GGG 0.483633 3_2:-54385389 None:intergenic
AATTGAAACCCAGACATTGT+AGG 0.493777 3_2:-54386176 None:intergenic
CACCTAGCTGAAGCAGCCCT+TGG 0.495944 3_2:+54385903 Msa0411830:CDS
TAATTGGCTTCCTGGTAAGA+AGG 0.496087 3_2:-54385950 None:intergenic
GTACATAAACTTTGGCTCCA+TGG 0.498108 3_2:-54386236 None:intergenic
TGCCTCCCAAGGTTTATTTG+TGG 0.499842 3_2:-54386117 None:intergenic
CGCCTCATTCCCAAGAATGC+TGG 0.504148 3_2:+54385380 Msa0411830:CDS
CATACAACAAGAACACGAAA+TGG 0.504962 3_2:+54386091 Msa0411830:CDS
GCCATGTTGAGCAATGTAAG+AGG 0.506799 3_2:-54385345 None:intergenic
GGCTGAAATTGCTACAACAT+TGG 0.510087 3_2:+54385863 Msa0411830:CDS
CGATGATTTAATGAACCCTA+TGG 0.511276 3_2:+54386406 Msa0411830:CDS
GTGGAAAGAGCTGCAGGCTA+AGG 0.513697 3_2:+54385507 Msa0411830:CDS
CAGGAAGCCAATTAACTACC+AGG 0.514872 3_2:+54385959 Msa0411830:CDS
AGAGATGTGGAAAGAGCTGC+AGG 0.518445 3_2:+54385501 Msa0411830:CDS
GAAAGAGCTGCAGGCTAAGG+TGG 0.518447 3_2:+54385510 Msa0411830:CDS
AGGTGCTCCACCTTCTTACC+AGG 0.518602 3_2:+54385940 Msa0411830:CDS
CCTTGGTTGTTTCAAAGATG+AGG 0.521377 3_2:+54385920 Msa0411830:CDS
TGGAGCCAAAGTTTATGTAC+TGG 0.524375 3_2:+54386239 Msa0411830:CDS
AGAATGGCTTGTGGGTGACA+GGG 0.524652 3_2:-54385830 None:intergenic
ATGTTTACCCTACAATGTCT+GGG 0.526506 3_2:+54386168 Msa0411830:CDS
GCTAGGTGAGCTGCCTGTGG+CGG 0.527045 3_2:-54385888 None:intergenic
ATTGAAACCCAGACATTGTA+GGG 0.535977 3_2:-54386175 None:intergenic
CATAGGGTTCATTAAATCAT+CGG 0.538774 3_2:-54386405 Msa0411840:three_prime_UTR
CAACATTCTAATGAAGCTCT+GGG 0.540066 3_2:+54385984 Msa0411830:CDS
AACCAGCATTCTTGGGAATG+AGG 0.548940 3_2:-54385382 None:intergenic
CTTTATTGCCAAAACATGAT+GGG 0.551853 3_2:-54386202 None:intergenic
GGTACCCACAAATAAACCTT+GGG 0.553382 3_2:+54386112 Msa0411830:CDS
GGGTTCATTAAATCATCGGC+TGG 0.556449 3_2:-54386401 Msa0411840:three_prime_UTR
CTTCATTAGAATGTTGGCCC+TGG 0.558141 3_2:-54385977 None:intergenic
TCCTCTTACATTGCTCAACA+TGG 0.561657 3_2:+54385344 Msa0411830:CDS
AAACATGGCCATTTCTCGGA+TGG 0.561724 3_2:+54385557 Msa0411830:CDS
TAAATAGGTCTTCAGAGATG+TGG 0.563355 3_2:+54385488 Msa0411830:intron
TACAACATTGGCACCGCCAC+AGG 0.565334 3_2:+54385875 Msa0411830:CDS
AAACTGGCTTTGCTGATCCA+TGG 0.566371 3_2:-54386276 None:intergenic
AATGGCCATGTTTCAGATCA+GGG 0.575848 3_2:-54385547 None:intergenic
ACATTGTCCTTCTCACAGCA+TGG 0.579859 3_2:-54385281 None:intergenic
TAAATGGGAGAATGGCTTGT+GGG 0.580198 3_2:-54385838 None:intergenic
TGGTACCCACAAATAAACCT+TGG 0.585557 3_2:+54386111 Msa0411830:CDS
TGGAAGCACATGCACAGCCA+TGG 0.589208 3_2:+54386259 Msa0411830:CDS
TCGTATTCCATGCTGTGAGA+AGG 0.593369 3_2:+54385274 Msa0411830:CDS
TCAACTCAGACTGTGTCGTG+TGG 0.600659 3_2:+54386372 Msa0411830:CDS
CTTCGCCCTGATCTGAAACA+TGG 0.601248 3_2:+54385542 Msa0411830:CDS
CAACTCAGACTGTGTCGTGT+GGG 0.601754 3_2:+54386373 Msa0411830:CDS
TTGGCTTCCTGGTAAGAAGG+TGG 0.602905 3_2:-54385947 None:intergenic
TCAGCTAGGTGAGCTGCCTG+TGG 0.608657 3_2:-54385891 None:intergenic
AACCAAGGGCTGCTTCAGCT+AGG 0.608754 3_2:-54385905 None:intergenic
AAAACTTGAAGAGGAAAATG+GGG 0.610613 3_2:+54386304 Msa0411830:CDS
ACCCACAAATAAACCTTGGG+AGG 0.612263 3_2:+54386115 Msa0411830:CDS
GGAAAATGGGGATGATTCTG+AGG 0.614466 3_2:+54386316 Msa0411830:CDS
CATGTTTCAGATCAGGGCGA+AGG 0.628322 3_2:-54385541 None:intergenic
GAGAGGACAGTGGACACCTG+AGG 0.636969 3_2:+54385307 Msa0411830:CDS
CCTCATCTTTGAAACAACCA+AGG 0.643946 3_2:-54385920 None:intergenic
CTCATCTTTGAAACAACCAA+GGG 0.652070 3_2:-54385919 None:intergenic
GAGAAGGACAATGTGAAGAG+AGG 0.655263 3_2:+54385290 Msa0411830:CDS
AGGAAGCCAATTAACTACCA+GGG 0.690655 3_2:+54385960 Msa0411830:CDS
ATAAAGGGGATGCATCACCA+TGG 0.694152 3_2:+54386219 Msa0411830:CDS
TTAAATGGGAGAATGGCTTG+TGG 0.703670 3_2:-54385839 None:intergenic
AACATTCTAATGAAGCTCTG+GGG 0.732971 3_2:+54385985 Msa0411830:CDS
ACAATGTGAAGAGAGGACAG+TGG 0.746981 3_2:+54385297 Msa0411830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTGATTTAAATTAAAT+AGG + chr3_2:54385473-54385492 Msa0411830:intron 10.0%
!!! TTTTGTGATTTAAATTAAAT+AGG + chr3_2:54385473-54385492 Msa0411830:intron 10.0%
!! AGATTATATTTAGACGAATA+GGG - chr3_2:54385417-54385436 None:intergenic 20.0%
!! AGATTATATTTAGACGAATA+GGG - chr3_2:54385417-54385436 None:intergenic 20.0%
! CAGATTATATTTAGACGAAT+AGG - chr3_2:54385418-54385437 None:intergenic 25.0%
!! ATGATTTTTGACATCATTGT+CGG - chr3_2:54385766-54385785 None:intergenic 25.0%
! ACAATGATGTCAAAAATCAT+TGG + chr3_2:54385766-54385785 Msa0411830:CDS 25.0%
! AAAAACTTGAAGAGGAAAAT+GGG + chr3_2:54386303-54386322 Msa0411830:CDS 25.0%
! CAGATTATATTTAGACGAAT+AGG - chr3_2:54385418-54385437 None:intergenic 25.0%
!! ATGATTTTTGACATCATTGT+CGG - chr3_2:54385766-54385785 None:intergenic 25.0%
! ACAATGATGTCAAAAATCAT+TGG + chr3_2:54385766-54385785 Msa0411830:CDS 25.0%
! AAAAACTTGAAGAGGAAAAT+GGG + chr3_2:54386303-54386322 Msa0411830:CDS 25.0%
!!! TTCATTCAGTTTTTGGTAAC+AGG + chr3_2:54385603-54385622 Msa0411830:CDS 30.0%
TAATGCGTAGATAACATTAG+TGG - chr3_2:54385631-54385650 None:intergenic 30.0%
CTAATGTTATCTACGCATTA+AGG + chr3_2:54385631-54385650 Msa0411830:intron 30.0%
! TGCTTAAATTGTTGTTCAGA+TGG + chr3_2:54385709-54385728 Msa0411830:intron 30.0%
AGCAATTTCAGCCATTAAAT+GGG - chr3_2:54385856-54385875 None:intergenic 30.0%
TAGCAATTTCAGCCATTAAA+TGG - chr3_2:54385857-54385876 None:intergenic 30.0%
TGGCTTACAGTTAAAGTAAT+TGG - chr3_2:54386021-54386040 None:intergenic 30.0%
GATTAAGTTTGACCTATCTA+AGG + chr3_2:54386067-54386086 Msa0411830:CDS 30.0%
ATTGTAGGGTAAACATTGTA+TGG - chr3_2:54386164-54386183 None:intergenic 30.0%
CTTTATTGCCAAAACATGAT+GGG - chr3_2:54386205-54386224 None:intergenic 30.0%
!!! CATCATGTTTTGGCAATAAA+GGG + chr3_2:54386204-54386223 Msa0411830:CDS 30.0%
!!! ATCATGTTTTGGCAATAAAG+GGG + chr3_2:54386205-54386224 Msa0411830:CDS 30.0%
!! CTTCAAGTTTTTCATGAAAC+TGG - chr3_2:54386295-54386314 None:intergenic 30.0%
GTTTCATGAAAAACTTGAAG+AGG + chr3_2:54386295-54386314 Msa0411830:CDS 30.0%
GAAAAACTTGAAGAGGAAAA+TGG + chr3_2:54386302-54386321 Msa0411830:CDS 30.0%
AAAACTTGAAGAGGAAAATG+GGG + chr3_2:54386304-54386323 Msa0411830:CDS 30.0%
! ACAGTCTGAGTTGAATATAT+TGG - chr3_2:54386366-54386385 None:intergenic 30.0%
CATAGGGTTCATTAAATCAT+CGG - chr3_2:54386408-54386427 Msa0411840:three_prime_UTR 30.0%
!!! TTCATTCAGTTTTTGGTAAC+AGG + chr3_2:54385603-54385622 Msa0411830:CDS 30.0%
TAATGCGTAGATAACATTAG+TGG - chr3_2:54385631-54385650 None:intergenic 30.0%
CTAATGTTATCTACGCATTA+AGG + chr3_2:54385631-54385650 Msa0411830:intron 30.0%
! TGCTTAAATTGTTGTTCAGA+TGG + chr3_2:54385709-54385728 Msa0411830:intron 30.0%
AGCAATTTCAGCCATTAAAT+GGG - chr3_2:54385856-54385875 None:intergenic 30.0%
TAGCAATTTCAGCCATTAAA+TGG - chr3_2:54385857-54385876 None:intergenic 30.0%
TGGCTTACAGTTAAAGTAAT+TGG - chr3_2:54386021-54386040 None:intergenic 30.0%
GATTAAGTTTGACCTATCTA+AGG + chr3_2:54386067-54386086 Msa0411830:CDS 30.0%
ATTGTAGGGTAAACATTGTA+TGG - chr3_2:54386164-54386183 None:intergenic 30.0%
CTTTATTGCCAAAACATGAT+GGG - chr3_2:54386205-54386224 None:intergenic 30.0%
!!! CATCATGTTTTGGCAATAAA+GGG + chr3_2:54386204-54386223 Msa0411830:CDS 30.0%
!!! ATCATGTTTTGGCAATAAAG+GGG + chr3_2:54386205-54386224 Msa0411830:CDS 30.0%
!! CTTCAAGTTTTTCATGAAAC+TGG - chr3_2:54386295-54386314 None:intergenic 30.0%
GTTTCATGAAAAACTTGAAG+AGG + chr3_2:54386295-54386314 Msa0411830:CDS 30.0%
GAAAAACTTGAAGAGGAAAA+TGG + chr3_2:54386302-54386321 Msa0411830:CDS 30.0%
AAAACTTGAAGAGGAAAATG+GGG + chr3_2:54386304-54386323 Msa0411830:CDS 30.0%
! ACAGTCTGAGTTGAATATAT+TGG - chr3_2:54386366-54386385 None:intergenic 30.0%
CATAGGGTTCATTAAATCAT+CGG - chr3_2:54386408-54386427 Msa0411840:three_prime_UTR 30.0%
TATTTAGACGAATAGGGAGA+AGG - chr3_2:54385411-54385430 None:intergenic 35.0%
TAAATAGGTCTTCAGAGATG+TGG + chr3_2:54385488-54385507 Msa0411830:intron 35.0%
! GTGAAGCTTCATTCAGTTTT+TGG + chr3_2:54385596-54385615 Msa0411830:CDS 35.0%
!!! TGACAGTTTCTTTTTCAGCT+TGG - chr3_2:54385796-54385815 None:intergenic 35.0%
AAGCTGAAAAAGAAACTGTC+AGG + chr3_2:54385795-54385814 Msa0411830:CDS 35.0%
AAAAAGAAACTGTCAGGCAT+GGG + chr3_2:54385801-54385820 Msa0411830:CDS 35.0%
!! CTCATCTTTGAAACAACCAA+GGG - chr3_2:54385922-54385941 None:intergenic 35.0%
CAACATTCTAATGAAGCTCT+GGG + chr3_2:54385984-54386003 Msa0411830:CDS 35.0%
AACATTCTAATGAAGCTCTG+GGG + chr3_2:54385985-54386004 Msa0411830:CDS 35.0%
! CATTTCGTGTTCTTGTTGTA+TGG - chr3_2:54386093-54386112 None:intergenic 35.0%
CATACAACAAGAACACGAAA+TGG + chr3_2:54386091-54386110 Msa0411830:CDS 35.0%
AATGTTTACCCTACAATGTC+TGG + chr3_2:54386167-54386186 Msa0411830:CDS 35.0%
ATGTTTACCCTACAATGTCT+GGG + chr3_2:54386168-54386187 Msa0411830:CDS 35.0%
ATTGAAACCCAGACATTGTA+GGG - chr3_2:54386178-54386197 None:intergenic 35.0%
AATTGAAACCCAGACATTGT+AGG - chr3_2:54386179-54386198 None:intergenic 35.0%
CCTTTATTGCCAAAACATGA+TGG - chr3_2:54386206-54386225 None:intergenic 35.0%
!!! CCATCATGTTTTGGCAATAA+AGG + chr3_2:54386203-54386222 Msa0411830:CDS 35.0%
TGCTTCCAGTACATAAACTT+TGG - chr3_2:54386247-54386266 None:intergenic 35.0%
CGATGATTTAATGAACCCTA+TGG + chr3_2:54386406-54386425 Msa0411830:CDS 35.0%
TATTTAGACGAATAGGGAGA+AGG - chr3_2:54385411-54385430 None:intergenic 35.0%
TAAATAGGTCTTCAGAGATG+TGG + chr3_2:54385488-54385507 Msa0411830:intron 35.0%
! GTGAAGCTTCATTCAGTTTT+TGG + chr3_2:54385596-54385615 Msa0411830:CDS 35.0%
!!! TGACAGTTTCTTTTTCAGCT+TGG - chr3_2:54385796-54385815 None:intergenic 35.0%
AAGCTGAAAAAGAAACTGTC+AGG + chr3_2:54385795-54385814 Msa0411830:CDS 35.0%
AAAAAGAAACTGTCAGGCAT+GGG + chr3_2:54385801-54385820 Msa0411830:CDS 35.0%
!! CTCATCTTTGAAACAACCAA+GGG - chr3_2:54385922-54385941 None:intergenic 35.0%
CAACATTCTAATGAAGCTCT+GGG + chr3_2:54385984-54386003 Msa0411830:CDS 35.0%
AACATTCTAATGAAGCTCTG+GGG + chr3_2:54385985-54386004 Msa0411830:CDS 35.0%
! CATTTCGTGTTCTTGTTGTA+TGG - chr3_2:54386093-54386112 None:intergenic 35.0%
CATACAACAAGAACACGAAA+TGG + chr3_2:54386091-54386110 Msa0411830:CDS 35.0%
AATGTTTACCCTACAATGTC+TGG + chr3_2:54386167-54386186 Msa0411830:CDS 35.0%
ATGTTTACCCTACAATGTCT+GGG + chr3_2:54386168-54386187 Msa0411830:CDS 35.0%
ATTGAAACCCAGACATTGTA+GGG - chr3_2:54386178-54386197 None:intergenic 35.0%
AATTGAAACCCAGACATTGT+AGG - chr3_2:54386179-54386198 None:intergenic 35.0%
CCTTTATTGCCAAAACATGA+TGG - chr3_2:54386206-54386225 None:intergenic 35.0%
!!! CCATCATGTTTTGGCAATAA+AGG + chr3_2:54386203-54386222 Msa0411830:CDS 35.0%
TGCTTCCAGTACATAAACTT+TGG - chr3_2:54386247-54386266 None:intergenic 35.0%
CGATGATTTAATGAACCCTA+TGG + chr3_2:54386406-54386425 Msa0411830:CDS 35.0%
TCCTCTTACATTGCTCAACA+TGG + chr3_2:54385344-54385363 Msa0411830:CDS 40.0%
AAGGACTAACCAGCATTCTT+GGG - chr3_2:54385392-54385411 None:intergenic 40.0%
AATGGCCATGTTTCAGATCA+GGG - chr3_2:54385550-54385569 None:intergenic 40.0%
AAATGGCCATGTTTCAGATC+AGG - chr3_2:54385551-54385570 None:intergenic 40.0%
! TCTGAAACATGGCCATTTCT+CGG + chr3_2:54385553-54385572 Msa0411830:CDS 40.0%
GAAAAAGAAACTGTCAGGCA+TGG + chr3_2:54385800-54385819 Msa0411830:CDS 40.0%
! TAAATGGGAGAATGGCTTGT+GGG - chr3_2:54385841-54385860 None:intergenic 40.0%
TTAAATGGGAGAATGGCTTG+TGG - chr3_2:54385842-54385861 None:intergenic 40.0%
CAAGCCATTCTCCCATTTAA+TGG + chr3_2:54385842-54385861 Msa0411830:CDS 40.0%
TCAGCCATTAAATGGGAGAA+TGG - chr3_2:54385849-54385868 None:intergenic 40.0%
GGCTGAAATTGCTACAACAT+TGG + chr3_2:54385863-54385882 Msa0411830:CDS 40.0%
!! CCTCATCTTTGAAACAACCA+AGG - chr3_2:54385923-54385942 None:intergenic 40.0%
! CCTTGGTTGTTTCAAAGATG+AGG + chr3_2:54385920-54385939 Msa0411830:CDS 40.0%
! TAATTGGCTTCCTGGTAAGA+AGG - chr3_2:54385953-54385972 None:intergenic 40.0%
AGGAAGCCAATTAACTACCA+GGG + chr3_2:54385960-54385979 Msa0411830:CDS 40.0%
CCAGAGCTTCATTAGAATGT+TGG - chr3_2:54385986-54386005 None:intergenic 40.0%
CCAACATTCTAATGAAGCTC+TGG + chr3_2:54385983-54386002 Msa0411830:CDS 40.0%
ACAGCATCTTCTCTTTCTTC+TGG - chr3_2:54386041-54386060 None:intergenic 40.0%
! CTTGTTGTATGGCCTTAGAT+AGG - chr3_2:54386082-54386101 None:intergenic 40.0%
TGGTACCCACAAATAAACCT+TGG + chr3_2:54386111-54386130 Msa0411830:CDS 40.0%
GGTACCCACAAATAAACCTT+GGG + chr3_2:54386112-54386131 Msa0411830:CDS 40.0%
! CAATTCAGCCCATCATGTTT+TGG + chr3_2:54386194-54386213 Msa0411830:CDS 40.0%
! GTACATAAACTTTGGCTCCA+TGG - chr3_2:54386239-54386258 None:intergenic 40.0%
TGGAGCCAAAGTTTATGTAC+TGG + chr3_2:54386239-54386258 Msa0411830:CDS 40.0%
TCCTCTTACATTGCTCAACA+TGG + chr3_2:54385344-54385363 Msa0411830:CDS 40.0%
AAGGACTAACCAGCATTCTT+GGG - chr3_2:54385392-54385411 None:intergenic 40.0%
AATGGCCATGTTTCAGATCA+GGG - chr3_2:54385550-54385569 None:intergenic 40.0%
AAATGGCCATGTTTCAGATC+AGG - chr3_2:54385551-54385570 None:intergenic 40.0%
! TCTGAAACATGGCCATTTCT+CGG + chr3_2:54385553-54385572 Msa0411830:CDS 40.0%
GAAAAAGAAACTGTCAGGCA+TGG + chr3_2:54385800-54385819 Msa0411830:CDS 40.0%
! TAAATGGGAGAATGGCTTGT+GGG - chr3_2:54385841-54385860 None:intergenic 40.0%
TTAAATGGGAGAATGGCTTG+TGG - chr3_2:54385842-54385861 None:intergenic 40.0%
CAAGCCATTCTCCCATTTAA+TGG + chr3_2:54385842-54385861 Msa0411830:CDS 40.0%
TCAGCCATTAAATGGGAGAA+TGG - chr3_2:54385849-54385868 None:intergenic 40.0%
GGCTGAAATTGCTACAACAT+TGG + chr3_2:54385863-54385882 Msa0411830:CDS 40.0%
!! CCTCATCTTTGAAACAACCA+AGG - chr3_2:54385923-54385942 None:intergenic 40.0%
! CCTTGGTTGTTTCAAAGATG+AGG + chr3_2:54385920-54385939 Msa0411830:CDS 40.0%
! TAATTGGCTTCCTGGTAAGA+AGG - chr3_2:54385953-54385972 None:intergenic 40.0%
AGGAAGCCAATTAACTACCA+GGG + chr3_2:54385960-54385979 Msa0411830:CDS 40.0%
CCAGAGCTTCATTAGAATGT+TGG - chr3_2:54385986-54386005 None:intergenic 40.0%
CCAACATTCTAATGAAGCTC+TGG + chr3_2:54385983-54386002 Msa0411830:CDS 40.0%
ACAGCATCTTCTCTTTCTTC+TGG - chr3_2:54386041-54386060 None:intergenic 40.0%
! CTTGTTGTATGGCCTTAGAT+AGG - chr3_2:54386082-54386101 None:intergenic 40.0%
TGGTACCCACAAATAAACCT+TGG + chr3_2:54386111-54386130 Msa0411830:CDS 40.0%
GGTACCCACAAATAAACCTT+GGG + chr3_2:54386112-54386131 Msa0411830:CDS 40.0%
! CAATTCAGCCCATCATGTTT+TGG + chr3_2:54386194-54386213 Msa0411830:CDS 40.0%
! GTACATAAACTTTGGCTCCA+TGG - chr3_2:54386239-54386258 None:intergenic 40.0%
TGGAGCCAAAGTTTATGTAC+TGG + chr3_2:54386239-54386258 Msa0411830:CDS 40.0%
TCGTATTCCATGCTGTGAGA+AGG + chr3_2:54385274-54385293 Msa0411830:CDS 45.0%
ACATTGTCCTTCTCACAGCA+TGG - chr3_2:54385284-54385303 None:intergenic 45.0%
GAGAAGGACAATGTGAAGAG+AGG + chr3_2:54385290-54385309 Msa0411830:CDS 45.0%
ACAATGTGAAGAGAGGACAG+TGG + chr3_2:54385297-54385316 Msa0411830:CDS 45.0%
GCCATGTTGAGCAATGTAAG+AGG - chr3_2:54385348-54385367 None:intergenic 45.0%
AACCAGCATTCTTGGGAATG+AGG - chr3_2:54385385-54385404 None:intergenic 45.0%
GAAGGACTAACCAGCATTCT+TGG - chr3_2:54385393-54385412 None:intergenic 45.0%
AAACATGGCCATTTCTCGGA+TGG + chr3_2:54385557-54385576 Msa0411830:CDS 45.0%
! CTGGTAGTTAATTGGCTTCC+TGG - chr3_2:54385961-54385980 None:intergenic 45.0%
CAGGAAGCCAATTAACTACC+AGG + chr3_2:54385959-54385978 Msa0411830:CDS 45.0%
TGTTGGCCCTGGTAGTTAAT+TGG - chr3_2:54385969-54385988 None:intergenic 45.0%
CTTCATTAGAATGTTGGCCC+TGG - chr3_2:54385980-54385999 None:intergenic 45.0%
ACCCACAAATAAACCTTGGG+AGG + chr3_2:54386115-54386134 Msa0411830:CDS 45.0%
GCCTCCCAAGGTTTATTTGT+GGG - chr3_2:54386119-54386138 None:intergenic 45.0%
TGCCTCCCAAGGTTTATTTG+TGG - chr3_2:54386120-54386139 None:intergenic 45.0%
ATAAAGGGGATGCATCACCA+TGG + chr3_2:54386219-54386238 Msa0411830:CDS 45.0%
!! AAACTGGCTTTGCTGATCCA+TGG - chr3_2:54386279-54386298 None:intergenic 45.0%
GGAAAATGGGGATGATTCTG+AGG + chr3_2:54386316-54386335 Msa0411830:CDS 45.0%
GGGTTCATTAAATCATCGGC+TGG - chr3_2:54386404-54386423 Msa0411840:three_prime_UTR 45.0%
TCGTATTCCATGCTGTGAGA+AGG + chr3_2:54385274-54385293 Msa0411830:CDS 45.0%
ACATTGTCCTTCTCACAGCA+TGG - chr3_2:54385284-54385303 None:intergenic 45.0%
GAGAAGGACAATGTGAAGAG+AGG + chr3_2:54385290-54385309 Msa0411830:CDS 45.0%
ACAATGTGAAGAGAGGACAG+TGG + chr3_2:54385297-54385316 Msa0411830:CDS 45.0%
GCCATGTTGAGCAATGTAAG+AGG - chr3_2:54385348-54385367 None:intergenic 45.0%
AACCAGCATTCTTGGGAATG+AGG - chr3_2:54385385-54385404 None:intergenic 45.0%
GAAGGACTAACCAGCATTCT+TGG - chr3_2:54385393-54385412 None:intergenic 45.0%
AAACATGGCCATTTCTCGGA+TGG + chr3_2:54385557-54385576 Msa0411830:CDS 45.0%
! CTGGTAGTTAATTGGCTTCC+TGG - chr3_2:54385961-54385980 None:intergenic 45.0%
CAGGAAGCCAATTAACTACC+AGG + chr3_2:54385959-54385978 Msa0411830:CDS 45.0%
TGTTGGCCCTGGTAGTTAAT+TGG - chr3_2:54385969-54385988 None:intergenic 45.0%
CTTCATTAGAATGTTGGCCC+TGG - chr3_2:54385980-54385999 None:intergenic 45.0%
ACCCACAAATAAACCTTGGG+AGG + chr3_2:54386115-54386134 Msa0411830:CDS 45.0%
GCCTCCCAAGGTTTATTTGT+GGG - chr3_2:54386119-54386138 None:intergenic 45.0%
TGCCTCCCAAGGTTTATTTG+TGG - chr3_2:54386120-54386139 None:intergenic 45.0%
ATAAAGGGGATGCATCACCA+TGG + chr3_2:54386219-54386238 Msa0411830:CDS 45.0%
!! AAACTGGCTTTGCTGATCCA+TGG - chr3_2:54386279-54386298 None:intergenic 45.0%
GGAAAATGGGGATGATTCTG+AGG + chr3_2:54386316-54386335 Msa0411830:CDS 45.0%
GGGTTCATTAAATCATCGGC+TGG - chr3_2:54386404-54386423 Msa0411840:three_prime_UTR 45.0%
!! GAGAGCTTGTTGTCTTCCTC+AGG - chr3_2:54385326-54385345 None:intergenic 50.0%
AGAGATGTGGAAAGAGCTGC+AGG + chr3_2:54385501-54385520 Msa0411830:CDS 50.0%
CATGTTTCAGATCAGGGCGA+AGG - chr3_2:54385544-54385563 None:intergenic 50.0%
! CTTCGCCCTGATCTGAAACA+TGG + chr3_2:54385542-54385561 Msa0411830:CDS 50.0%
GCTCTTCTCCATCCGAGAAA+TGG - chr3_2:54385568-54385587 None:intergenic 50.0%
! AGAATGGCTTGTGGGTGACA+GGG - chr3_2:54385833-54385852 None:intergenic 50.0%
TTGGCTTCCTGGTAAGAAGG+TGG - chr3_2:54385950-54385969 None:intergenic 50.0%
TCAACTCAGACTGTGTCGTG+TGG + chr3_2:54386372-54386391 Msa0411830:CDS 50.0%
CAACTCAGACTGTGTCGTGT+GGG + chr3_2:54386373-54386392 Msa0411830:CDS 50.0%
!! GAGAGCTTGTTGTCTTCCTC+AGG - chr3_2:54385326-54385345 None:intergenic 50.0%
AGAGATGTGGAAAGAGCTGC+AGG + chr3_2:54385501-54385520 Msa0411830:CDS 50.0%
CATGTTTCAGATCAGGGCGA+AGG - chr3_2:54385544-54385563 None:intergenic 50.0%
! CTTCGCCCTGATCTGAAACA+TGG + chr3_2:54385542-54385561 Msa0411830:CDS 50.0%
GCTCTTCTCCATCCGAGAAA+TGG - chr3_2:54385568-54385587 None:intergenic 50.0%
! AGAATGGCTTGTGGGTGACA+GGG - chr3_2:54385833-54385852 None:intergenic 50.0%
TTGGCTTCCTGGTAAGAAGG+TGG - chr3_2:54385950-54385969 None:intergenic 50.0%
TCAACTCAGACTGTGTCGTG+TGG + chr3_2:54386372-54386391 Msa0411830:CDS 50.0%
CAACTCAGACTGTGTCGTGT+GGG + chr3_2:54386373-54386392 Msa0411830:CDS 50.0%
CTCAACATGGCACTCGCAAC+TGG + chr3_2:54385357-54385376 Msa0411830:CDS 55.0%
CGCCTCATTCCCAAGAATGC+TGG + chr3_2:54385380-54385399 Msa0411830:CDS 55.0%
GTGGAAAGAGCTGCAGGCTA+AGG + chr3_2:54385507-54385526 Msa0411830:CDS 55.0%
GAAAGAGCTGCAGGCTAAGG+TGG + chr3_2:54385510-54385529 Msa0411830:CDS 55.0%
ACATCATTGTCGGTGCGTCC+TGG - chr3_2:54385756-54385775 None:intergenic 55.0%
! GAGAATGGCTTGTGGGTGAC+AGG - chr3_2:54385834-54385853 None:intergenic 55.0%
TACAACATTGGCACCGCCAC+AGG + chr3_2:54385875-54385894 Msa0411830:CDS 55.0%
AACCAAGGGCTGCTTCAGCT+AGG - chr3_2:54385908-54385927 None:intergenic 55.0%
AGGTGCTCCACCTTCTTACC+AGG + chr3_2:54385940-54385959 Msa0411830:CDS 55.0%
CTTGCAGTTGTTGCCTCCCA+AGG - chr3_2:54386131-54386150 None:intergenic 55.0%
! TGGAAGCACATGCACAGCCA+TGG + chr3_2:54386259-54386278 Msa0411830:CDS 55.0%
CTCAACATGGCACTCGCAAC+TGG + chr3_2:54385357-54385376 Msa0411830:CDS 55.0%
CGCCTCATTCCCAAGAATGC+TGG + chr3_2:54385380-54385399 Msa0411830:CDS 55.0%
GTGGAAAGAGCTGCAGGCTA+AGG + chr3_2:54385507-54385526 Msa0411830:CDS 55.0%
GAAAGAGCTGCAGGCTAAGG+TGG + chr3_2:54385510-54385529 Msa0411830:CDS 55.0%
ACATCATTGTCGGTGCGTCC+TGG - chr3_2:54385756-54385775 None:intergenic 55.0%
! GAGAATGGCTTGTGGGTGAC+AGG - chr3_2:54385834-54385853 None:intergenic 55.0%
TACAACATTGGCACCGCCAC+AGG + chr3_2:54385875-54385894 Msa0411830:CDS 55.0%
AACCAAGGGCTGCTTCAGCT+AGG - chr3_2:54385908-54385927 None:intergenic 55.0%
AGGTGCTCCACCTTCTTACC+AGG + chr3_2:54385940-54385959 Msa0411830:CDS 55.0%
CTTGCAGTTGTTGCCTCCCA+AGG - chr3_2:54386131-54386150 None:intergenic 55.0%
! TGGAAGCACATGCACAGCCA+TGG + chr3_2:54386259-54386278 Msa0411830:CDS 55.0%
GAGAGGACAGTGGACACCTG+AGG + chr3_2:54385307-54385326 Msa0411830:CDS 60.0%
TCAGCTAGGTGAGCTGCCTG+TGG - chr3_2:54385894-54385913 None:intergenic 60.0%
CACCTAGCTGAAGCAGCCCT+TGG + chr3_2:54385903-54385922 Msa0411830:CDS 60.0%
GAGAGGACAGTGGACACCTG+AGG + chr3_2:54385307-54385326 Msa0411830:CDS 60.0%
TCAGCTAGGTGAGCTGCCTG+TGG - chr3_2:54385894-54385913 None:intergenic 60.0%
CACCTAGCTGAAGCAGCCCT+TGG + chr3_2:54385903-54385922 Msa0411830:CDS 60.0%
CTGATAGCAGCGCAGCTGCC+AGG + chr3_2:54385735-54385754 Msa0411830:CDS 65.0%
GCTAGGTGAGCTGCCTGTGG+CGG - chr3_2:54385891-54385910 None:intergenic 65.0%
CTGATAGCAGCGCAGCTGCC+AGG + chr3_2:54385735-54385754 Msa0411830:CDS 65.0%
GCTAGGTGAGCTGCCTGTGG+CGG - chr3_2:54385891-54385910 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 54385269 54386433 54385269 ID=Msa0411830;Name=Msa0411830
chr3_2 mRNA 54385269 54386433 54385269 ID=Msa0411830-mRNA-1;Parent=Msa0411830;Name=Msa0411830-mRNA-1;_AED=0.08;_eAED=0.16;_QI=0|0|0|1|1|1|3|0|322
chr3_2 exon 54385269 54385401 54385269 ID=Msa0411830-mRNA-1:exon:11016;Parent=Msa0411830-mRNA-1
chr3_2 exon 54385495 54385624 54385495 ID=Msa0411830-mRNA-1:exon:11017;Parent=Msa0411830-mRNA-1
chr3_2 exon 54385728 54386433 54385728 ID=Msa0411830-mRNA-1:exon:11018;Parent=Msa0411830-mRNA-1
chr3_2 CDS 54385269 54385401 54385269 ID=Msa0411830-mRNA-1:cds;Parent=Msa0411830-mRNA-1
chr3_2 CDS 54385495 54385624 54385495 ID=Msa0411830-mRNA-1:cds;Parent=Msa0411830-mRNA-1
chr3_2 CDS 54385728 54386433 54385728 ID=Msa0411830-mRNA-1:cds;Parent=Msa0411830-mRNA-1
Gene Sequence

>Msa0411830

ATGGGTCGTATTCCATGCTGTGAGAAGGACAATGTGAAGAGAGGACAGTGGACACCTGAGGAAGACAACAAGCTCTCCTCTTACATTGCTCAACATGGCACTCGCAACTGGCGCCTCATTCCCAAGAATGCTGGTCTTCAGAGATGTGGAAAGAGCTGCAGGCTAAGGTGGACTAATTACCTTCGCCCTGATCTGAAACATGGCCATTTCTCGGATGGAGAAGAGCAAACAATTGTGAAGCTTCATTCAGTTTTTGGTAACAGATGGTCTCTGATAGCAGCGCAGCTGCCAGGACGCACCGACAATGATGTCAAAAATCATTGGAACACCAAGCTGAAAAAGAAACTGTCAGGCATGGGTATAGACCCTGTCACCCACAAGCCATTCTCCCATTTAATGGCTGAAATTGCTACAACATTGGCACCGCCACAGGCAGCTCACCTAGCTGAAGCAGCCCTTGGTTGTTTCAAAGATGAGGTGCTCCACCTTCTTACCAGGAAGCCAATTAACTACCAGGGCCAACATTCTAATGAAGCTCTGGGGAATAACATCACCAATTACTTTAACTGTAAGCCAGAAGAAAGAGAAGATGCTGTTGAGAAGATTAAGTTTGACCTATCTAAGGCCATACAACAAGAACACGAAATGGTACCCACAAATAAACCTTGGGAGGCAACAACTGCAAGTTTTGCAATGCCATACAATGTTTACCCTACAATGTCTGGGTTTCAATTCAGCCCATCATGTTTTGGCAATAAAGGGGATGCATCACCATGGAGCCAAAGTTTATGTACTGGAAGCACATGCACAGCCATGGATCAGCAAAGCCAGTTTCATGAAAAACTTGAAGAGGAAAATGGGGATGATTCTGAGGCTACAAAAGAAATTAGAAATCTATCCAATATATTCAACTCAGACTGTGTCGTGTGGGATTTACCAGCCGATGATTTAATGAACCCTATGGTATAA
Protein sequence

>Msa0411830

MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGHFSDGEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTRKPINYQGQHSNEALGNNITNYFNCKPEEREDAVEKIKFDLSKAIQQEHEMVPTNKPWEATTASFAMPYNVYPTMSGFQFSPSCFGNKGDASPWSQSLCTGSTCTAMDQQSQFHEKLEEENGDDSEATKEIRNLSNIFNSDCVVWDLPADDLMNPMV*