Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412830 | XP_024635619.1 | 87.766 | 188 | 5 | 2 | 257 | 444 | 1 | 170 | 2.62e-111 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412830 | sp|O34569|YOAA_BACSU | 32.121 | 165 | 94 | 4 | 263 | 418 | 9 | 164 | 4.29e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412830 | A0A072UXR7 | 95.625 | 160 | 6 | 1 | 257 | 416 | 1 | 159 | 1.87e-104 | 318 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0412830 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412830 | MtrunA17_Chr3g0104601 | 99.231 | 130 | 1 | 0 | 108 | 237 | 1 | 130 | 3.35e-91 | 273 |
| Msa0412830 | MtrunA17_Chr3g0104601 | 100.000 | 28 | 0 | 0 | 417 | 444 | 131 | 158 | 4.57e-13 | 67.0 |
| Msa0412830 | MtrunA17_Chr7g0273661 | 64.780 | 159 | 52 | 2 | 259 | 417 | 4 | 158 | 1.04e-71 | 223 |
| Msa0412830 | MtrunA17_Chr7g0223361 | 49.686 | 159 | 75 | 2 | 259 | 417 | 4 | 157 | 1.56e-46 | 158 |
| Msa0412830 | MtrunA17_Chr7g0223351 | 52.469 | 162 | 70 | 3 | 257 | 417 | 1 | 156 | 1.57e-46 | 158 |
| Msa0412830 | MtrunA17_Chr1g0204951 | 43.605 | 172 | 88 | 2 | 250 | 418 | 10 | 175 | 2.17e-42 | 148 |
| Msa0412830 | MtrunA17_Chr5g0394621 | 42.405 | 158 | 90 | 1 | 259 | 416 | 17 | 173 | 2.09e-41 | 145 |
| Msa0412830 | MtrunA17_Chr1g0204971 | 44.172 | 163 | 82 | 2 | 259 | 418 | 19 | 175 | 4.44e-41 | 144 |
| Msa0412830 | MtrunA17_Chr5g0394631 | 41.615 | 161 | 93 | 1 | 258 | 418 | 16 | 175 | 6.03e-37 | 139 |
| Msa0412830 | MtrunA17_Chr5g0394631 | 36.321 | 212 | 127 | 6 | 211 | 418 | 179 | 386 | 2.77e-29 | 118 |
| Msa0412830 | MtrunA17_Chr1g0147101 | 30.097 | 103 | 71 | 1 | 128 | 229 | 138 | 240 | 6.70e-14 | 72.0 |
| Msa0412830 | MtrunA17_Chr1g0147081 | 28.571 | 126 | 82 | 3 | 107 | 229 | 115 | 235 | 3.70e-13 | 69.7 |
| Msa0412830 | MtrunA17_Chr1g0147091 | 29.126 | 103 | 72 | 1 | 128 | 229 | 133 | 235 | 4.17e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412830 | AT5G58740.1 | 86.154 | 130 | 18 | 0 | 108 | 237 | 1 | 130 | 5.19e-80 | 244 |
| Msa0412830 | AT5G58740.1 | 96.429 | 28 | 1 | 0 | 417 | 444 | 131 | 158 | 1.61e-12 | 65.9 |
| Msa0412830 | AT2G32030.1 | 46.795 | 156 | 75 | 2 | 263 | 417 | 24 | 172 | 1.34e-49 | 167 |
| Msa0412830 | AT3G22560.1 | 50.617 | 162 | 74 | 2 | 257 | 416 | 1 | 158 | 1.02e-48 | 164 |
| Msa0412830 | AT2G32020.1 | 44.872 | 156 | 78 | 2 | 263 | 417 | 19 | 167 | 1.56e-42 | 149 |
| Msa0412830 | AT5G53400.1 | 28.155 | 103 | 73 | 1 | 128 | 229 | 147 | 249 | 2.81e-11 | 64.7 |
Find 109 sgRNAs with CRISPR-Local
Find 474 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTGACCTTGACCTAATA+TGG | 0.170521 | 3_2:-56677305 | None:intergenic |
| TGCTTTAGCTGCTAACTATT+GGG | 0.244053 | 3_2:+56679773 | Msa0412830:CDS |
| TCTGAACATGTCGACGATAC+TGG | 0.264350 | 3_2:+56674724 | Msa0412830:CDS |
| TTTCAAGGATATTCCTGATT+TGG | 0.284182 | 3_2:+56679842 | Msa0412830:CDS |
| ATGCTTTAGCTGCTAACTAT+TGG | 0.297415 | 3_2:+56679772 | Msa0412830:CDS |
| TTGATTTCTTCTTCTGTGTT+TGG | 0.297568 | 3_2:-56675545 | None:intergenic |
| TGAAAAGAAGCATTTCTTTA+CGG | 0.298680 | 3_2:+56675451 | Msa0412830:CDS |
| GAAAAGAAGCATTTCTTTAC+GGG | 0.328513 | 3_2:+56675452 | Msa0412830:CDS |
| ATAGGACTTCAAATCAAAAT+AGG | 0.331911 | 3_2:-56681042 | None:intergenic |
| TGGAAAAGGCTGGGTTCCTT+AGG | 0.332765 | 3_2:+56679916 | Msa0412830:CDS |
| ACATGGGCTTCTCCCATATT+AGG | 0.341483 | 3_2:+56677292 | Msa0412830:CDS |
| CTCTAATAACAACAGACTTT+TGG | 0.347860 | 3_2:+56680912 | Msa0412830:three_prime_UTR |
| TGTAAATATTGACCTCATCT+AGG | 0.350522 | 3_2:-56675741 | None:intergenic |
| ATCTTTCGACTGCCCTTTGT+TGG | 0.361092 | 3_2:+56680952 | Msa0412830:three_prime_UTR |
| AGTTTGATTGTCAATGCATA+TGG | 0.363098 | 3_2:-56679676 | None:intergenic |
| GCCCTTAAGCCTTGTTATCA+TGG | 0.379319 | 3_2:+56674678 | Msa0412830:CDS |
| AATAGCTTGGAATGAACATT+AGG | 0.383397 | 3_2:-56675775 | None:intergenic |
| AACTTGTATGAAACATTGTT+TGG | 0.385384 | 3_2:+56681084 | Msa0412830:three_prime_UTR |
| TCCTGATCCGAGGACCTTCA+TGG | 0.398170 | 3_2:+56680744 | Msa0412830:CDS |
| CAGTCCAAGCATATTGAACT+TGG | 0.399137 | 3_2:+56675811 | Msa0412830:CDS |
| GACCATGATAACAAGGCTTA+AGG | 0.399725 | 3_2:-56674680 | None:intergenic |
| AGGATATTCCTGATTTGGTT+AGG | 0.403665 | 3_2:+56679847 | Msa0412830:CDS |
| CAGAGGGTCTTGGAAAAGGC+TGG | 0.409286 | 3_2:+56679906 | Msa0412830:CDS |
| TCAAGCTTCTCAGAGGGTCT+TGG | 0.410928 | 3_2:+56679896 | Msa0412830:CDS |
| GCTTGTATCCTAACCAAATC+AGG | 0.412489 | 3_2:-56679855 | None:intergenic |
| ATTAGGGTTACATTGAGAAA+TGG | 0.412790 | 3_2:-56675850 | None:intergenic |
| CCCATGAAGGTCCTCGGATC+AGG | 0.426096 | 3_2:-56680745 | None:intergenic |
| GATACCAAGTTCAATATGCT+TGG | 0.433465 | 3_2:-56675815 | None:intergenic |
| TACAGCAACTTTCACTGCTT+GGG | 0.434215 | 3_2:-56679811 | None:intergenic |
| TTCATATCAATTTCTCCAGC+TGG | 0.435051 | 3_2:+56679705 | Msa0412830:CDS |
| ACCATGATAACAAGGCTTAA+GGG | 0.446631 | 3_2:-56674679 | None:intergenic |
| GACGATTTCATGTTAGTAGT+AGG | 0.447782 | 3_2:+56679549 | Msa0412830:CDS |
| GAAAGTATTCGTATGTCAAA+GGG | 0.450496 | 3_2:+56679952 | Msa0412830:CDS |
| GGAAAAGGCTGGGTTCCTTA+GGG | 0.450654 | 3_2:+56679917 | Msa0412830:CDS |
| CATGTCGACGATACTGGGTT+TGG | 0.450941 | 3_2:+56674730 | Msa0412830:CDS |
| TTCTCAGAGGGTCTTGGAAA+AGG | 0.453234 | 3_2:+56679902 | Msa0412830:CDS |
| CTGAACATGTCGACGATACT+GGG | 0.457974 | 3_2:+56674725 | Msa0412830:CDS |
| GGTGAGGAATGCACACATCT+TGG | 0.460078 | 3_2:-56679641 | None:intergenic |
| TCAATTTCTCCAGCTGGATC+TGG | 0.461550 | 3_2:+56679711 | Msa0412830:CDS |
| GTAAATATTGACCTCATCTA+GGG | 0.477378 | 3_2:-56675740 | None:intergenic |
| CATATTGAACTTGGTATCAA+AGG | 0.483096 | 3_2:+56675820 | Msa0412830:CDS |
| AATAAGCTGTGTAATCCCTT+TGG | 0.484561 | 3_2:+56680837 | Msa0412830:three_prime_UTR |
| ATACAGCAACTTTCACTGCT+TGG | 0.488169 | 3_2:-56679812 | None:intergenic |
| AAAAGAAGAATCTGTCTTCA+CGG | 0.497313 | 3_2:-56675973 | None:intergenic |
| AGAAAGTATTCGTATGTCAA+AGG | 0.497625 | 3_2:+56679951 | Msa0412830:CDS |
| AATCGTACAGTAAAATAGCT+TGG | 0.501286 | 3_2:-56675788 | None:intergenic |
| CCTGATCCGAGGACCTTCAT+GGG | 0.504487 | 3_2:+56680745 | Msa0412830:CDS |
| AACATTGTTTGGCCTGCGTT+GGG | 0.505869 | 3_2:+56681095 | Msa0412830:three_prime_UTR |
| ACTTGTCAAGAATCACTTTG+CGG | 0.506940 | 3_2:+56679505 | Msa0412830:CDS |
| ATGTGTGCATTCCTCACCCT+TGG | 0.512563 | 3_2:+56679646 | Msa0412830:CDS |
| TAACTTTAAATGCCAACAAA+GGG | 0.515104 | 3_2:-56680964 | None:intergenic |
| AAACATTGTTTGGCCTGCGT+TGG | 0.525140 | 3_2:+56681094 | Msa0412830:three_prime_UTR |
| ATGATGATGATGATAGATGT+AGG | 0.526752 | 3_2:+56679736 | Msa0412830:CDS |
| TGCAGACATGGCATTGAAGA+AGG | 0.527572 | 3_2:+56674986 | Msa0412830:intron |
| TCTGATTATCATCTTACAGC+AGG | 0.527628 | 3_2:-56680812 | None:intergenic |
| GATAGATGTAGGGCTGAGAT+TGG | 0.528170 | 3_2:+56679747 | Msa0412830:CDS |
| AGGGTTACATTGAGAAATGG+AGG | 0.529746 | 3_2:-56675847 | None:intergenic |
| ATGCATATGGATCGAATCCA+AGG | 0.534732 | 3_2:-56679663 | None:intergenic |
| TTCTTCTTTCTCAGAAACAA+AGG | 0.538807 | 3_2:+56675490 | Msa0412830:CDS |
| GGATTCATTCAGTATAGCTA+TGG | 0.539475 | 3_2:+56679476 | Msa0412830:intron |
| AACTGACCTTGACCTAATAT+GGG | 0.540070 | 3_2:-56677304 | None:intergenic |
| GCTGCTAACTATTGGGGTCA+AGG | 0.542202 | 3_2:+56679780 | Msa0412830:CDS |
| TGCATTGACAATCAAACTAT+CGG | 0.542819 | 3_2:+56679681 | Msa0412830:CDS |
| TCCACATCACTCAACTTGAA+TGG | 0.543757 | 3_2:-56679528 | None:intergenic |
| CATATTAGGTCAAGGTCAGT+TGG | 0.544512 | 3_2:+56677306 | Msa0412830:CDS |
| GCTTTAGCTGCTAACTATTG+GGG | 0.545318 | 3_2:+56679774 | Msa0412830:CDS |
| AAAGAAGAATCTGTCTTCAC+GGG | 0.545725 | 3_2:-56675972 | None:intergenic |
| TGATCGAATTCCACCCATGA+AGG | 0.554220 | 3_2:-56680758 | None:intergenic |
| CTAACTTTAAATGCCAACAA+AGG | 0.559638 | 3_2:-56680965 | None:intergenic |
| GGCATTGAAGAAGGTGGTGA+TGG | 0.562627 | 3_2:+56674995 | Msa0412830:CDS |
| AGAGGGTCTTGGAAAAGGCT+GGG | 0.565008 | 3_2:+56679907 | Msa0412830:CDS |
| CGATGAAGACCATGATAACA+AGG | 0.573454 | 3_2:-56674687 | None:intergenic |
| TAATTAAATGGCATCAAACA+AGG | 0.574063 | 3_2:-56680866 | None:intergenic |
| CAGAATCAAGTTTCAGACAA+AGG | 0.574466 | 3_2:-56677485 | None:intergenic |
| TCATCATCACCAGATCCAGC+TGG | 0.579658 | 3_2:-56679720 | None:intergenic |
| TATCTGGCTAGGTGATCCAT+AGG | 0.581390 | 3_2:-56681060 | None:intergenic |
| AAAGGCTGGGTTCCTTAGGG+AGG | 0.584244 | 3_2:+56679920 | Msa0412830:CDS |
| CAAACAAGGAAGATACCAAA+GGG | 0.586833 | 3_2:-56680852 | None:intergenic |
| ATTCCACCCATGAAGGTCCT+CGG | 0.590322 | 3_2:-56680751 | None:intergenic |
| AGCTTGGAATGAACATTAGG+AGG | 0.592571 | 3_2:-56675772 | None:intergenic |
| ATGGATCGAATCCAAGGGTG+AGG | 0.594977 | 3_2:-56679657 | None:intergenic |
| TGATGATGATGATAGATGTA+GGG | 0.595585 | 3_2:+56679737 | Msa0412830:CDS |
| TTCTGAGTATACCCTCCCTA+AGG | 0.601810 | 3_2:-56679932 | None:intergenic |
| AGAGAGACAAGGGTCAAACA+TGG | 0.603649 | 3_2:+56677275 | Msa0412830:CDS |
| GCCATTCAAGTTGAGTGATG+TGG | 0.605116 | 3_2:+56679527 | Msa0412830:CDS |
| AAAGAAAAGTACCGTTGTGG+AGG | 0.606940 | 3_2:-56675622 | None:intergenic |
| ACTTTGAATAAGAGAGACAA+GGG | 0.618834 | 3_2:+56677265 | Msa0412830:CDS |
| CATGCTTCAGAGATTTCAAG+AGG | 0.622637 | 3_2:+56677363 | Msa0412830:CDS |
| GTGGAAACTGTCCTGATCCG+AGG | 0.625407 | 3_2:+56680734 | Msa0412830:CDS |
| GAGTGACAAACTATACTAGA+CGG | 0.627131 | 3_2:+56679580 | Msa0412830:CDS |
| CTTGAAATCTCTGAAGCATG+AGG | 0.633282 | 3_2:-56677360 | None:intergenic |
| GATCCGAGGACCTTCATGGG+TGG | 0.640610 | 3_2:+56680748 | Msa0412830:CDS |
| TCAAACAAGGAAGATACCAA+AGG | 0.644184 | 3_2:-56680853 | None:intergenic |
| GAGAGACAAGGGTCAAACAT+GGG | 0.644230 | 3_2:+56677276 | Msa0412830:CDS |
| GCTTCTCCCATATTAGGTCA+AGG | 0.646578 | 3_2:+56677298 | Msa0412830:CDS |
| ATTTATAGATATCTGACACG+TGG | 0.650313 | 3_2:+56675396 | Msa0412830:intron |
| CAGGCAAATACAAACTCTTG+CGG | 0.655847 | 3_2:-56680793 | None:intergenic |
| ATGGGATCAAACCCTAGATG+AGG | 0.659468 | 3_2:+56675729 | Msa0412830:CDS |
| GCTTCAGAGATTTCAAGAGG+AGG | 0.661326 | 3_2:+56677366 | Msa0412830:CDS |
| TGCATATGGATCGAATCCAA+GGG | 0.662518 | 3_2:-56679662 | None:intergenic |
| TAGAGAATCAAGCTTCTCAG+AGG | 0.665582 | 3_2:+56679889 | Msa0412830:CDS |
| AACTTTGAATAAGAGAGACA+AGG | 0.665667 | 3_2:+56677264 | Msa0412830:CDS |
| AAGGCTGGGTTCCTTAGGGA+GGG | 0.668142 | 3_2:+56679921 | Msa0412830:CDS |
| AGAGAATCAAGCTTCTCAGA+GGG | 0.682910 | 3_2:+56679890 | Msa0412830:CDS |
| GGAAAAGAAAAGTACCGTTG+TGG | 0.682974 | 3_2:-56675625 | None:intergenic |
| AAAGTATTCGTATGTCAAAG+GGG | 0.693837 | 3_2:+56679953 | Msa0412830:CDS |
| TCGAAAGATTAACATACCAG+AGG | 0.699818 | 3_2:-56680938 | None:intergenic |
| AGACATGGCATTGAAGAAGG+TGG | 0.729192 | 3_2:+56674989 | Msa0412830:intron |
| CGTCACATATTCCTCCACAA+CGG | 0.747274 | 3_2:+56675611 | Msa0412830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTACATAATAAATATTATT+GGG | - | chr3_2:56679302-56679321 | None:intergenic | 10.0% |
| !! | TTGTACATAATAAATATTAT+TGG | - | chr3_2:56679303-56679322 | None:intergenic | 10.0% |
| !!! | TATTATTATCATTTTTGTTT+TGG | + | chr3_2:56680381-56680400 | Msa0412830:intron | 10.0% |
| !!! | TTTAACATCAAAAATTTTTT+GGG | - | chr3_2:56680467-56680486 | None:intergenic | 10.0% |
| !!! | ATTTAACATCAAAAATTTTT+TGG | - | chr3_2:56680468-56680487 | None:intergenic | 10.0% |
| !! | ATATTCTATTATTTATAAGT+TGG | + | chr3_2:56680622-56680641 | Msa0412830:intron | 10.0% |
| !!! | TGCTTTTTAATTTAATTAAA+TGG | - | chr3_2:56680881-56680900 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTAAATCTTTCAA+AGG | + | chr3_2:56674820-56674839 | Msa0412830:intron | 15.0% |
| !!! | TGTTTTTTAAATCTTTCAAA+GGG | + | chr3_2:56674821-56674840 | Msa0412830:intron | 15.0% |
| !! | AAGAAGAAATAAAAAAAACA+AGG | + | chr3_2:56675077-56675096 | Msa0412830:intron | 15.0% |
| !!! | TTGTTTTAGATTTTTTTTAG+AGG | - | chr3_2:56675276-56675295 | None:intergenic | 15.0% |
| !! | TATGCAACAAAAAAAATTAA+AGG | - | chr3_2:56675884-56675903 | None:intergenic | 15.0% |
| !!! | GTTCATTTTTAAACTTATAT+CGG | - | chr3_2:56676158-56676177 | None:intergenic | 15.0% |
| !!! | ATGAAATAATATGATTAGTT+TGG | + | chr3_2:56676290-56676309 | Msa0412830:intron | 15.0% |
| !!! | TGAAATAATATGATTAGTTT+GGG | + | chr3_2:56676291-56676310 | Msa0412830:intron | 15.0% |
| !!! | TTTTGAAAGAGTAAATTTTT+AGG | + | chr3_2:56678089-56678108 | Msa0412830:intron | 15.0% |
| !!! | TTTGAAAGAGTAAATTTTTA+GGG | + | chr3_2:56678090-56678109 | Msa0412830:intron | 15.0% |
| !!! | AAGTTTGTTGAAAAAAAAAA+GGG | - | chr3_2:56678782-56678801 | None:intergenic | 15.0% |
| !! | TGTTAATTAAACTATTACTA+AGG | - | chr3_2:56679092-56679111 | None:intergenic | 15.0% |
| !! | ATCATATGTAAACTATTAAA+TGG | + | chr3_2:56679114-56679133 | Msa0412830:intron | 15.0% |
| !! | AAAATACATAAACTATATTG+TGG | + | chr3_2:56679165-56679184 | Msa0412830:intron | 15.0% |
| !!! | ATTTTTTCTTTCTTTTAATG+TGG | + | chr3_2:56680072-56680091 | Msa0412830:intron | 15.0% |
| !!! | TTTTTTGAATATTATTAGCA+TGG | + | chr3_2:56680233-56680252 | Msa0412830:intron | 15.0% |
| !!! | TTTTTGAATATTATTAGCAT+GGG | + | chr3_2:56680234-56680253 | Msa0412830:intron | 15.0% |
| !! | ATAATTTCACTATAACTATT+TGG | + | chr3_2:56680310-56680329 | Msa0412830:intron | 15.0% |
| !! | ATAGAATATAATGTGATTAA+TGG | - | chr3_2:56680611-56680630 | None:intergenic | 15.0% |
| !!! | TATAGCGAAAAACATATTTT+CGG | - | chr3_2:56675123-56675142 | None:intergenic | 20.0% |
| !! | AATAAATGGAATAAGATTTG+TGG | + | chr3_2:56675302-56675321 | Msa0412830:intron | 20.0% |
| !!! | AGTTTGGGTTTATAATTAAT+TGG | + | chr3_2:56676306-56676325 | Msa0412830:intron | 20.0% |
| !! | TTAATTGGATAGGATTAATT+TGG | + | chr3_2:56676321-56676340 | Msa0412830:intron | 20.0% |
| !! | TAATTGGATAGGATTAATTT+GGG | + | chr3_2:56676322-56676341 | Msa0412830:intron | 20.0% |
| !! | TCATTTATGAAATAAATCAG+CGG | + | chr3_2:56676457-56676476 | Msa0412830:intron | 20.0% |
| !! | TTGTTTAATAGTGTAAATGT+TGG | + | chr3_2:56676546-56676565 | Msa0412830:intron | 20.0% |
| !!! | TACTTTGTTTTATTTGGAAA+AGG | + | chr3_2:56677020-56677039 | Msa0412830:intron | 20.0% |
| !!! | TTTTGAAAGTATTGTTTTAG+AGG | + | chr3_2:56677685-56677704 | Msa0412830:intron | 20.0% |
| !!! | AAATTATACAGGATTTTAGA+GGG | - | chr3_2:56677807-56677826 | None:intergenic | 20.0% |
| !!! | AAAATTATACAGGATTTTAG+AGG | - | chr3_2:56677808-56677827 | None:intergenic | 20.0% |
| !! | ACTACATAGATTAAATTTGA+AGG | + | chr3_2:56678166-56678185 | Msa0412830:intron | 20.0% |
| !!! | AAAAAAAGGGGTATAAAATA+TGG | - | chr3_2:56678769-56678788 | None:intergenic | 20.0% |
| !!! | AGTTTGTTGAAAAAAAAAAG+GGG | - | chr3_2:56678781-56678800 | None:intergenic | 20.0% |
| !!! | CAAGTTTGTTGAAAAAAAAA+AGG | - | chr3_2:56678783-56678802 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTCAACAAACT+TGG | + | chr3_2:56678781-56678800 | Msa0412830:intron | 20.0% |
| !! | TATAGAGGAACTTAAATTAT+CGG | - | chr3_2:56679036-56679055 | None:intergenic | 20.0% |
| !! | CTCTATAGTATATAATAACT+GGG | + | chr3_2:56679049-56679068 | Msa0412830:intron | 20.0% |
| !! | ATCCTTATCTTGATTAAATA+TGG | - | chr3_2:56679192-56679211 | None:intergenic | 20.0% |
| !! | TACACTAATAATCAATTACA+TGG | + | chr3_2:56679216-56679235 | Msa0412830:intron | 20.0% |
| !!! | ATAAATATTATTGGGTTAGT+TGG | - | chr3_2:56679294-56679313 | None:intergenic | 20.0% |
| !! | AATCAATAAAACCAAACAAT+AGG | - | chr3_2:56679333-56679352 | None:intergenic | 20.0% |
| !! | TGTATTAATAAAATGGAGTA+CGG | - | chr3_2:56679359-56679378 | None:intergenic | 20.0% |
| !!! | TATTTATTCGTTTTTTTGAC+TGG | - | chr3_2:56679405-56679424 | None:intergenic | 20.0% |
| !! | AGAAGAAACAAACAATAAAT+GGG | - | chr3_2:56680195-56680214 | None:intergenic | 20.0% |
| !! | ATTTCTAACTTTCTTGATAA+TGG | + | chr3_2:56680342-56680361 | Msa0412830:intron | 20.0% |
| !!! | TTTCTAACTTTCTTGATAAT+GGG | + | chr3_2:56680343-56680362 | Msa0412830:intron | 20.0% |
| !! | GTTAGATGTGTATATAAAAA+AGG | + | chr3_2:56680983-56681002 | Msa0412830:three_prime_UTR | 20.0% |
| ! | CTTATTGTCTTTCCATATAT+TGG | + | chr3_2:56674897-56674916 | Msa0412830:intron | 25.0% |
| !!! | TGAAAAGAAGCATTTCTTTA+CGG | + | chr3_2:56675451-56675470 | Msa0412830:CDS | 25.0% |
| ! | TACAAAAATGGCAGAAAAAT+TGG | + | chr3_2:56675577-56675596 | Msa0412830:CDS | 25.0% |
| ! | TTTGTTTGATTGGATAGAAA+TGG | - | chr3_2:56675673-56675692 | None:intergenic | 25.0% |
| ! | AACTCATTCTTCTTCAATTT+AGG | + | chr3_2:56675691-56675710 | Msa0412830:intron | 25.0% |
| ! | ATTAAAGGAGAGTGAAATTA+GGG | - | chr3_2:56675869-56675888 | None:intergenic | 25.0% |
| ! | AATTAAAGGAGAGTGAAATT+AGG | - | chr3_2:56675870-56675889 | None:intergenic | 25.0% |
| ! | TGTTATGAATGATGTTAAGT+TGG | + | chr3_2:56676059-56676078 | Msa0412830:intron | 25.0% |
| !!! | AAGTTGGTTTTCGAATTAAT+TGG | + | chr3_2:56676075-56676094 | Msa0412830:intron | 25.0% |
| !!! | AGTTGGTTTTCGAATTAATT+GGG | + | chr3_2:56676076-56676095 | Msa0412830:intron | 25.0% |
| ! | GGGTTTATAATTAATTGGAT+AGG | + | chr3_2:56676311-56676330 | Msa0412830:intron | 25.0% |
| ! | TTGATTATGAGAAAGTTGTT+TGG | + | chr3_2:56676384-56676403 | Msa0412830:intron | 25.0% |
| ! | TGATTATGAGAAAGTTGTTT+GGG | + | chr3_2:56676385-56676404 | Msa0412830:intron | 25.0% |
| ! | GTTCTTAAAACTAAATCAAG+AGG | + | chr3_2:56676431-56676450 | Msa0412830:intron | 25.0% |
| !!! | TGTTCTGAGAATTTTTTTAG+AGG | + | chr3_2:56676604-56676623 | Msa0412830:intron | 25.0% |
| !!! | GAATTTTTTTAGAGGTGTAT+TGG | + | chr3_2:56676612-56676631 | Msa0412830:intron | 25.0% |
| ! | TGAACTTAAAATTACAGAAG+AGG | - | chr3_2:56676741-56676760 | None:intergenic | 25.0% |
| !!! | CTCTGTTACTTTGTTTTATT+TGG | + | chr3_2:56677014-56677033 | Msa0412830:intron | 25.0% |
| !!! | TTTTATTTGGAAAAGGAAAC+AGG | + | chr3_2:56677027-56677046 | Msa0412830:intron | 25.0% |
| !!! | ATGTGATATTTTTTGTGTGA+TGG | + | chr3_2:56677404-56677423 | Msa0412830:intron | 25.0% |
| !!! | TGTGATATTTTTTGTGTGAT+GGG | + | chr3_2:56677405-56677424 | Msa0412830:intron | 25.0% |
| ! | ACAAATTAGTATCACAACAA+AGG | - | chr3_2:56677581-56677600 | None:intergenic | 25.0% |
| ! | TTATGAGAGATTGGAAATAT+AGG | + | chr3_2:56677637-56677656 | Msa0412830:intron | 25.0% |
| ! | AAAAAAAAAGAAGGAACAAG+TGG | - | chr3_2:56677918-56677937 | None:intergenic | 25.0% |
| ! | CATGAATATAATAAGCATAC+TGG | - | chr3_2:56678669-56678688 | None:intergenic | 25.0% |
| ! | ATATCCAGAGTATATTCATT+AGG | + | chr3_2:56678735-56678754 | Msa0412830:intron | 25.0% |
| ! | TATCCAGAGTATATTCATTA+GGG | + | chr3_2:56678736-56678755 | Msa0412830:intron | 25.0% |
| ! | TGTATAATATTGAGATGAGA+AGG | + | chr3_2:56678937-56678956 | Msa0412830:intron | 25.0% |
| ! | GTATAATATTGAGATGAGAA+GGG | + | chr3_2:56678938-56678957 | Msa0412830:intron | 25.0% |
| ! | TATAATATTGAGATGAGAAG+GGG | + | chr3_2:56678939-56678958 | Msa0412830:intron | 25.0% |
| ! | CCAGTTATTATATACTATAG+AGG | - | chr3_2:56679051-56679070 | None:intergenic | 25.0% |
| ! | CCTCTATAGTATATAATAAC+TGG | + | chr3_2:56679048-56679067 | Msa0412830:intron | 25.0% |
| ! | ATAGTATATAATAACTGGGT+TGG | + | chr3_2:56679053-56679072 | Msa0412830:intron | 25.0% |
| ! | GTCCATATTTAATCAAGATA+AGG | + | chr3_2:56679187-56679206 | Msa0412830:intron | 25.0% |
| ! | TAATAATCAATTACATGGTG+AGG | + | chr3_2:56679221-56679240 | Msa0412830:intron | 25.0% |
| !! | AGTTGGACAATATTTTGTAT+TGG | - | chr3_2:56679277-56679296 | None:intergenic | 25.0% |
| ! | GTATTAATAAAATGGAGTAC+GGG | - | chr3_2:56679358-56679377 | None:intergenic | 25.0% |
| ! | AGTAGAAAGAAATACATGAT+TGG | + | chr3_2:56679447-56679466 | Msa0412830:intron | 25.0% |
| ! | GAGAAGAAACAAACAATAAA+TGG | - | chr3_2:56680196-56680215 | None:intergenic | 25.0% |
| ! | TAACAATAATTCACCTCAAA+AGG | - | chr3_2:56680426-56680445 | None:intergenic | 25.0% |
| !!! | ACATCAAAAATTTTTTGGGT+GGG | - | chr3_2:56680463-56680482 | None:intergenic | 25.0% |
| !!! | AACATCAAAAATTTTTTGGG+TGG | - | chr3_2:56680464-56680483 | None:intergenic | 25.0% |
| ! | AATGTGATTAATGGTTACTA+TGG | - | chr3_2:56680602-56680621 | None:intergenic | 25.0% |
| ! | TCAATAGAAATAGTAGATAG+AGG | - | chr3_2:56680660-56680679 | None:intergenic | 25.0% |
| ! | TAATTAAATGGCATCAAACA+AGG | - | chr3_2:56680869-56680888 | None:intergenic | 25.0% |
| ! | TAACTTTAAATGCCAACAAA+GGG | - | chr3_2:56680967-56680986 | None:intergenic | 25.0% |
| ! | ATAGGACTTCAAATCAAAAT+AGG | - | chr3_2:56681045-56681064 | None:intergenic | 25.0% |
| !!! | TATTTTGATTTGAAGTCCTA+TGG | + | chr3_2:56681044-56681063 | Msa0412830:three_prime_UTR | 25.0% |
| !!! | TGTTTCATACAAGTTTTATC+TGG | - | chr3_2:56681079-56681098 | None:intergenic | 25.0% |
| ! | AACTTGTATGAAACATTGTT+TGG | + | chr3_2:56681084-56681103 | Msa0412830:three_prime_UTR | 25.0% |
| CACACTTCAAAACCAATATA+TGG | - | chr3_2:56674912-56674931 | None:intergenic | 30.0% | |
| TTGAAGTGTGCTATATATGA+TGG | + | chr3_2:56674922-56674941 | Msa0412830:intron | 30.0% | |
| ATTTATAGATATCTGACACG+TGG | + | chr3_2:56675396-56675415 | Msa0412830:intron | 30.0% | |
| !! | GAAAAGAAGCATTTCTTTAC+GGG | + | chr3_2:56675452-56675471 | Msa0412830:CDS | 30.0% |
| TTCTTCTTTCTCAGAAACAA+AGG | + | chr3_2:56675490-56675509 | Msa0412830:CDS | 30.0% | |
| TTGATTTCTTCTTCTGTGTT+TGG | - | chr3_2:56675548-56675567 | None:intergenic | 30.0% | |
| CAAACACGAGTTTACAAAAA+TGG | + | chr3_2:56675565-56675584 | Msa0412830:CDS | 30.0% | |
| ATGGAATGAAATTGGAAAGA+TGG | - | chr3_2:56675649-56675668 | None:intergenic | 30.0% | |
| GAAATGGAATGGAATGAAAT+TGG | - | chr3_2:56675657-56675676 | None:intergenic | 30.0% | |
| TTGATTGGATAGAAATGGAA+TGG | - | chr3_2:56675668-56675687 | None:intergenic | 30.0% | |
| ! | GAAGAATGAGTTTGTTTGAT+TGG | - | chr3_2:56675683-56675702 | None:intergenic | 30.0% |
| GTAAATATTGACCTCATCTA+GGG | - | chr3_2:56675743-56675762 | None:intergenic | 30.0% | |
| TGTAAATATTGACCTCATCT+AGG | - | chr3_2:56675744-56675763 | None:intergenic | 30.0% | |
| AATAGCTTGGAATGAACATT+AGG | - | chr3_2:56675778-56675797 | None:intergenic | 30.0% | |
| AATCGTACAGTAAAATAGCT+TGG | - | chr3_2:56675791-56675810 | None:intergenic | 30.0% | |
| CATATTGAACTTGGTATCAA+AGG | + | chr3_2:56675820-56675839 | Msa0412830:CDS | 30.0% | |
| ATTAGGGTTACATTGAGAAA+TGG | - | chr3_2:56675853-56675872 | None:intergenic | 30.0% | |
| AAAAGAAGAATCTGTCTTCA+CGG | - | chr3_2:56675976-56675995 | None:intergenic | 30.0% | |
| ! | TGAAGACAGATTCTTCTTTT+TGG | + | chr3_2:56675976-56675995 | Msa0412830:CDS | 30.0% |
| ! | GATTCTTCTTTTTGGACTTT+AGG | + | chr3_2:56675984-56676003 | Msa0412830:CDS | 30.0% |
| !!! | GTTGGTTTTCGAATTAATTG+GGG | + | chr3_2:56676077-56676096 | Msa0412830:intron | 30.0% |
| !! | TTGGTTTTCGAATTAATTGG+GGG | + | chr3_2:56676078-56676097 | Msa0412830:intron | 30.0% |
| ! | TTTGGTTAAGTTTAGTTCGT+TGG | + | chr3_2:56676345-56676364 | Msa0412830:intron | 30.0% |
| GATTATGAGAAAGTTGTTTG+GGG | + | chr3_2:56676386-56676405 | Msa0412830:intron | 30.0% | |
| ATTATGAGAAAGTTGTTTGG+GGG | + | chr3_2:56676387-56676406 | Msa0412830:intron | 30.0% | |
| !! | TTTTTAGAGGTGTATTGGAA+TGG | + | chr3_2:56676617-56676636 | Msa0412830:intron | 30.0% |
| AAAATCGATTATACCAAGCA+AGG | - | chr3_2:56676959-56676978 | None:intergenic | 30.0% | |
| TAACAACTACACTAAGTACA+AGG | - | chr3_2:56677154-56677173 | None:intergenic | 30.0% | |
| AACTTTGAATAAGAGAGACA+AGG | + | chr3_2:56677264-56677283 | Msa0412830:CDS | 30.0% | |
| ACTTTGAATAAGAGAGACAA+GGG | + | chr3_2:56677265-56677284 | Msa0412830:CDS | 30.0% | |
| !!! | ATTTTTTGTGTGATGGGATT+TGG | + | chr3_2:56677411-56677430 | Msa0412830:intron | 30.0% |
| ACAGGGTTAAAGTTAAACAA+AGG | - | chr3_2:56677516-56677535 | None:intergenic | 30.0% | |
| AACAAAGGAATGAACGTAAT+CGG | - | chr3_2:56677566-56677585 | None:intergenic | 30.0% | |
| TTGTATACTTAAGCTCTGTT+TGG | + | chr3_2:56677597-56677616 | Msa0412830:intron | 30.0% | |
| AGGGAACTCAAAAATTATAC+AGG | - | chr3_2:56677818-56677837 | None:intergenic | 30.0% | |
| !!! | TTTTTGAGTTCCCTCAAATT+AGG | + | chr3_2:56677824-56677843 | Msa0412830:intron | 30.0% |
| !!! | TTTTGAGTTCCCTCAAATTA+GGG | + | chr3_2:56677825-56677844 | Msa0412830:intron | 30.0% |
| ACAAAATACCCCTAATTTGA+GGG | - | chr3_2:56677837-56677856 | None:intergenic | 30.0% | |
| TACAAAATACCCCTAATTTG+AGG | - | chr3_2:56677838-56677857 | None:intergenic | 30.0% | |
| !!! | AGAATAGAGAGTTTTGGAAA+GGG | - | chr3_2:56677893-56677912 | None:intergenic | 30.0% |
| !!! | AAGAATAGAGAGTTTTGGAA+AGG | - | chr3_2:56677894-56677913 | None:intergenic | 30.0% |
| ! | AAAACCCTCCAATACAATTT+TGG | + | chr3_2:56678217-56678236 | Msa0412830:intron | 30.0% |
| AACTCCAAAATTGTATTGGA+GGG | - | chr3_2:56678224-56678243 | None:intergenic | 30.0% | |
| AGAAATAGATGATGTTGAGA+GGG | - | chr3_2:56678302-56678321 | None:intergenic | 30.0% | |
| AAGAAATAGATGATGTTGAG+AGG | - | chr3_2:56678303-56678322 | None:intergenic | 30.0% | |
| ATATTCTTCCATTTCGTATG+GGG | - | chr3_2:56678495-56678514 | None:intergenic | 30.0% | |
| CATATTCTTCCATTTCGTAT+GGG | - | chr3_2:56678496-56678515 | None:intergenic | 30.0% | |
| TCATATTCTTCCATTTCGTA+TGG | - | chr3_2:56678497-56678516 | None:intergenic | 30.0% | |
| GAAATGGAAGAATATGAATG+TGG | + | chr3_2:56678500-56678519 | Msa0412830:intron | 30.0% | |
| ! | CATTTTGTTAACCACATGTA+TGG | - | chr3_2:56678543-56678562 | None:intergenic | 30.0% |
| CATACATGTGGTTAACAAAA+TGG | + | chr3_2:56678541-56678560 | Msa0412830:intron | 30.0% | |
| ! | ACTTTAGATTTTAAACCGTC+AGG | + | chr3_2:56678851-56678870 | Msa0412830:intron | 30.0% |
| ! | CTTTAGATTTTAAACCGTCA+GGG | + | chr3_2:56678852-56678871 | Msa0412830:intron | 30.0% |
| CAATAAAACCAAACAATAGG+CGG | - | chr3_2:56679330-56679349 | None:intergenic | 30.0% | |
| TTCTTTCTACTCTGTTAGAA+GGG | - | chr3_2:56679438-56679457 | None:intergenic | 30.0% | |
| TTTCTTTCTACTCTGTTAGA+AGG | - | chr3_2:56679439-56679458 | None:intergenic | 30.0% | |
| ! | GAAATACATGATTGGTTGAT+TGG | + | chr3_2:56679455-56679474 | Msa0412830:intron | 30.0% |
| !!! | ACGGAAAAGTTTTGTTTCAA+GGG | + | chr3_2:56679599-56679618 | Msa0412830:CDS | 30.0% |
| AGTTTGATTGTCAATGCATA+TGG | - | chr3_2:56679679-56679698 | None:intergenic | 30.0% | |
| ! | TGCATTGACAATCAAACTAT+CGG | + | chr3_2:56679681-56679700 | Msa0412830:CDS | 30.0% |
| ! | ATGATGATGATGATAGATGT+AGG | + | chr3_2:56679736-56679755 | Msa0412830:CDS | 30.0% |
| ! | TGATGATGATGATAGATGTA+GGG | + | chr3_2:56679737-56679756 | Msa0412830:CDS | 30.0% |
| TTTCAAGGATATTCCTGATT+TGG | + | chr3_2:56679842-56679861 | Msa0412830:CDS | 30.0% | |
| !! | AGAAAGTATTCGTATGTCAA+AGG | + | chr3_2:56679951-56679970 | Msa0412830:CDS | 30.0% |
| !! | GAAAGTATTCGTATGTCAAA+GGG | + | chr3_2:56679952-56679971 | Msa0412830:CDS | 30.0% |
| ! | AAAGTATTCGTATGTCAAAG+GGG | + | chr3_2:56679953-56679972 | Msa0412830:CDS | 30.0% |
| !!! | TATTTTTAGCCTTTTGTCAG+AGG | + | chr3_2:56679992-56680011 | Msa0412830:intron | 30.0% |
| CAAAAAAAGTTGACAACTGT+AGG | - | chr3_2:56680220-56680239 | None:intergenic | 30.0% | |
| GAAATTATCTGTCAAGTTCA+AGG | - | chr3_2:56680298-56680317 | None:intergenic | 30.0% | |
| !!! | ATTTTTGTTTTGGACACTAC+TGG | + | chr3_2:56680391-56680410 | Msa0412830:intron | 30.0% |
| !!! | ATCAAAAATTTTTTGGGTGG+GGG | - | chr3_2:56680461-56680480 | None:intergenic | 30.0% |
| !!! | CATCAAAAATTTTTTGGGTG+GGG | - | chr3_2:56680462-56680481 | None:intergenic | 30.0% |
| TCTAAATTACTCAGTCTGTT+TGG | + | chr3_2:56680509-56680528 | Msa0412830:intron | 30.0% | |
| ! | TTTTCACAAGCTCAATTTAG+TGG | + | chr3_2:56680715-56680734 | Msa0412830:CDS | 30.0% |
| ! | CTCTAATAACAACAGACTTT+TGG | + | chr3_2:56680912-56680931 | Msa0412830:three_prime_UTR | 30.0% |
| CTAACTTTAAATGCCAACAA+AGG | - | chr3_2:56680968-56680987 | None:intergenic | 30.0% | |
| ACCATGATAACAAGGCTTAA+GGG | - | chr3_2:56674682-56674701 | None:intergenic | 35.0% | |
| TGCATAAGGAGCAAAACAAA+GGG | - | chr3_2:56674970-56674989 | None:intergenic | 35.0% | |
| TGTAACAACACATACTGCAT+AGG | - | chr3_2:56675054-56675073 | None:intergenic | 35.0% | |
| ACGTGGAAAAAACAAAACGA+AGG | + | chr3_2:56675413-56675432 | Msa0412830:CDS | 35.0% | |
| CGTGGAAAAAACAAAACGAA+GGG | + | chr3_2:56675414-56675433 | Msa0412830:CDS | 35.0% | |
| !! | TAGGTCAAAAAGTGTTCGAA+TGG | + | chr3_2:56675710-56675729 | Msa0412830:intron | 35.0% |
| !! | AGGTCAAAAAGTGTTCGAAT+GGG | + | chr3_2:56675711-56675730 | Msa0412830:intron | 35.0% |
| GATACCAAGTTCAATATGCT+TGG | - | chr3_2:56675818-56675837 | None:intergenic | 35.0% | |
| AAAGAAGAATCTGTCTTCAC+GGG | - | chr3_2:56675975-56675994 | None:intergenic | 35.0% | |
| CACAGCACTTCTTATGAAAA+AGG | - | chr3_2:56676220-56676239 | None:intergenic | 35.0% | |
| ! | GGATAGGATTAATTTGGGTT+TGG | + | chr3_2:56676327-56676346 | Msa0412830:intron | 35.0% |
| !!! | GTTCGTTGGTTTTTCAAGAA+AGG | + | chr3_2:56676359-56676378 | Msa0412830:intron | 35.0% |
| GACAAAGATTCTATCTTGGA+AGG | + | chr3_2:56676409-56676428 | Msa0412830:intron | 35.0% | |
| GTAAGCGATAAATAGTTGGT+GGG | + | chr3_2:56676510-56676529 | Msa0412830:intron | 35.0% | |
| ! | TAAGCGATAAATAGTTGGTG+GGG | + | chr3_2:56676511-56676530 | Msa0412830:intron | 35.0% |
| ATCAGATCGAAGATCAATGA+TGG | + | chr3_2:56676653-56676672 | Msa0412830:intron | 35.0% | |
| ! | AAGCTTTCTTTGTTTGGAAC+TGG | + | chr3_2:56676680-56676699 | Msa0412830:intron | 35.0% |
| AACTTTACTTGATATGCCTG+TGG | + | chr3_2:56676762-56676781 | Msa0412830:intron | 35.0% | |
| TATTTGGAAAAGGAAACAGG+TGG | + | chr3_2:56677030-56677049 | Msa0412830:intron | 35.0% | |
| ! | TAGGAAGCTTTGTGCATTTA+AGG | + | chr3_2:56677057-56677076 | Msa0412830:intron | 35.0% |
| ! | GCTTTGTGCATTTAAGGTTT+AGG | + | chr3_2:56677063-56677082 | Msa0412830:intron | 35.0% |
| ! | TTGTGCATTTAAGGTTTAGG+TGG | + | chr3_2:56677066-56677085 | Msa0412830:intron | 35.0% |
| GGTGGTGATTAATGTTGTAA+TGG | + | chr3_2:56677084-56677103 | Msa0412830:intron | 35.0% | |
| GTGTACAAAGAGTAGATGAA+AGG | - | chr3_2:56677132-56677151 | None:intergenic | 35.0% | |
| AACTGACCTTGACCTAATAT+GGG | - | chr3_2:56677307-56677326 | None:intergenic | 35.0% | |
| CAGAATCAAGTTTCAGACAA+AGG | - | chr3_2:56677488-56677507 | None:intergenic | 35.0% | |
| !! | TACAGGATTTTAGAGGGTTT+CGG | - | chr3_2:56677801-56677820 | None:intergenic | 35.0% |
| ! | TTTGAGTTCCCTCAAATTAG+GGG | + | chr3_2:56677826-56677845 | Msa0412830:intron | 35.0% |
| !!! | GAATAGAGAGTTTTGGAAAG+GGG | - | chr3_2:56677892-56677911 | None:intergenic | 35.0% |
| ! | GTGGAAAGAATAGAGAGTTT+TGG | - | chr3_2:56677899-56677918 | None:intergenic | 35.0% |
| !! | TAAGGCTTTGTTTGCAAGTT+TGG | - | chr3_2:56677970-56677989 | None:intergenic | 35.0% |
| AAACTTGCAAACAAAGCCTT+AGG | + | chr3_2:56677969-56677988 | Msa0412830:intron | 35.0% | |
| AAACTCCAAAACAAAGCCTA+AGG | - | chr3_2:56677988-56678007 | None:intergenic | 35.0% | |
| !!! | TTAGGCTTTGTTTTGGAGTT+TGG | + | chr3_2:56677987-56678006 | Msa0412830:intron | 35.0% |
| GTTGGAAATATGGGAGAAAA+TGG | + | chr3_2:56678050-56678069 | Msa0412830:intron | 35.0% | |
| !!! | TTGTATTGGAGGGTTTTAGA+GGG | - | chr3_2:56678214-56678233 | None:intergenic | 35.0% |
| !! | ATTGTATTGGAGGGTTTTAG+AGG | - | chr3_2:56678215-56678234 | None:intergenic | 35.0% |
| GAACTCCAAAATTGTATTGG+AGG | - | chr3_2:56678225-56678244 | None:intergenic | 35.0% | |
| GAAATAGATGATGTTGAGAG+GGG | - | chr3_2:56678301-56678320 | None:intergenic | 35.0% | |
| AGAGGTTTGGAAAAAAAGGA+AGG | - | chr3_2:56678335-56678354 | None:intergenic | 35.0% | |
| !! | ATTATTTTTCATCAGCGTGC+AGG | - | chr3_2:56678434-56678453 | None:intergenic | 35.0% |
| TGAATGGATAACCATACATG+TGG | + | chr3_2:56678529-56678548 | Msa0412830:intron | 35.0% | |
| AAGAAGTGAAGAAAATGAGG+TGG | - | chr3_2:56678586-56678605 | None:intergenic | 35.0% | |
| TGCAAGAAGTGAAGAAAATG+AGG | - | chr3_2:56678589-56678608 | None:intergenic | 35.0% | |
| TGCTAAAGCTTACGAAAGAA+AGG | - | chr3_2:56678613-56678632 | None:intergenic | 35.0% | |
| CATCCCTAATGAATATACTC+TGG | - | chr3_2:56678742-56678761 | None:intergenic | 35.0% | |
| ! | ATCTGATAATTCAGTGGACT+TGG | + | chr3_2:56678962-56678981 | Msa0412830:intron | 35.0% |
| AGGAACTTAAATTATCGGCA+AGG | - | chr3_2:56679031-56679050 | None:intergenic | 35.0% | |
| GGATTCATTCAGTATAGCTA+TGG | + | chr3_2:56679476-56679495 | Msa0412830:intron | 35.0% | |
| ACTTGTCAAGAATCACTTTG+CGG | + | chr3_2:56679505-56679524 | Msa0412830:CDS | 35.0% | |
| GACGATTTCATGTTAGTAGT+AGG | + | chr3_2:56679549-56679568 | Msa0412830:CDS | 35.0% | |
| GAGTGACAAACTATACTAGA+CGG | + | chr3_2:56679580-56679599 | Msa0412830:CDS | 35.0% | |
| !!! | GACGGAAAAGTTTTGTTTCA+AGG | + | chr3_2:56679598-56679617 | Msa0412830:CDS | 35.0% |
| TTCATATCAATTTCTCCAGC+TGG | + | chr3_2:56679705-56679724 | Msa0412830:CDS | 35.0% | |
| ATGCTTTAGCTGCTAACTAT+TGG | + | chr3_2:56679772-56679791 | Msa0412830:CDS | 35.0% | |
| TGCTTTAGCTGCTAACTATT+GGG | + | chr3_2:56679773-56679792 | Msa0412830:CDS | 35.0% | |
| ! | TGCTGTATCACAAGTTTTCA+AGG | + | chr3_2:56679827-56679846 | Msa0412830:CDS | 35.0% |
| !! | AGGATATTCCTGATTTGGTT+AGG | + | chr3_2:56679847-56679866 | Msa0412830:CDS | 35.0% |
| TCATTCTCTACAGCAAACAT+AGG | + | chr3_2:56680019-56680038 | Msa0412830:intron | 35.0% | |
| ! | TTTTAATGTGGTGACTACTG+TGG | + | chr3_2:56680084-56680103 | Msa0412830:intron | 35.0% |
| TTTAATGTGGTGACTACTGT+GGG | + | chr3_2:56680085-56680104 | Msa0412830:intron | 35.0% | |
| ! | CTGGAATTATTCTCCTTTTG+AGG | + | chr3_2:56680410-56680429 | Msa0412830:intron | 35.0% |
| CTTGTGAAAAATCAAAACCC+GGG | - | chr3_2:56680705-56680724 | None:intergenic | 35.0% | |
| GCTTGTGAAAAATCAAAACC+CGG | - | chr3_2:56680706-56680725 | None:intergenic | 35.0% | |
| TCTGATTATCATCTTACAGC+AGG | - | chr3_2:56680815-56680834 | None:intergenic | 35.0% | |
| AATAAGCTGTGTAATCCCTT+TGG | + | chr3_2:56680837-56680856 | Msa0412830:three_prime_UTR | 35.0% | |
| CAAACAAGGAAGATACCAAA+GGG | - | chr3_2:56680855-56680874 | None:intergenic | 35.0% | |
| TCAAACAAGGAAGATACCAA+AGG | - | chr3_2:56680856-56680875 | None:intergenic | 35.0% | |
| TCGAAAGATTAACATACCAG+AGG | - | chr3_2:56680941-56680960 | None:intergenic | 35.0% | |
| !! | CATACAAGTTTTATCTGGCT+AGG | - | chr3_2:56681074-56681093 | None:intergenic | 35.0% |
| GACCATGATAACAAGGCTTA+AGG | - | chr3_2:56674683-56674702 | None:intergenic | 40.0% | |
| CGATGAAGACCATGATAACA+AGG | - | chr3_2:56674690-56674709 | None:intergenic | 40.0% | |
| ! | GGAATGTGAGTTGAGAAACT+CGG | + | chr3_2:56674751-56674770 | Msa0412830:intron | 40.0% |
| CTGCATAAGGAGCAAAACAA+AGG | - | chr3_2:56674971-56674990 | None:intergenic | 40.0% | |
| ! | TTTTGCTCCTTATGCAGACA+TGG | + | chr3_2:56674974-56674993 | Msa0412830:intron | 40.0% |
| TTCAATGCCATGTCTGCATA+AGG | - | chr3_2:56674984-56675003 | None:intergenic | 40.0% | |
| ! | AGGAATATGTGACGCTTTTC+TGG | - | chr3_2:56675605-56675624 | None:intergenic | 40.0% |
| !! | AAAGAAAAGTACCGTTGTGG+AGG | - | chr3_2:56675625-56675644 | None:intergenic | 40.0% |
| !! | GGAAAAGAAAAGTACCGTTG+TGG | - | chr3_2:56675628-56675647 | None:intergenic | 40.0% |
| AGCTTGGAATGAACATTAGG+AGG | - | chr3_2:56675775-56675794 | None:intergenic | 40.0% | |
| CAGTCCAAGCATATTGAACT+TGG | + | chr3_2:56675811-56675830 | Msa0412830:CDS | 40.0% | |
| AGGGTTACATTGAGAAATGG+AGG | - | chr3_2:56675850-56675869 | None:intergenic | 40.0% | |
| AACGTAATCACATGCCATGT+TGG | + | chr3_2:56676184-56676203 | Msa0412830:intron | 40.0% | |
| TGAAATAAATCAGCGGCTTG+AGG | + | chr3_2:56676464-56676483 | Msa0412830:intron | 40.0% | |
| GGTGGTAAGCGATAAATAGT+TGG | + | chr3_2:56676506-56676525 | Msa0412830:intron | 40.0% | |
| GGTAAGCGATAAATAGTTGG+TGG | + | chr3_2:56676509-56676528 | Msa0412830:intron | 40.0% | |
| !! | GATAAATAGTTGGTGGGGAA+CGG | + | chr3_2:56676516-56676535 | Msa0412830:intron | 40.0% |
| AGGTGTATTGGAATGGTTGT+AGG | + | chr3_2:56676624-56676643 | Msa0412830:intron | 40.0% | |
| GGTGCTAAGCTTTCTTTGTT+TGG | + | chr3_2:56676674-56676693 | Msa0412830:intron | 40.0% | |
| AAACCACCTCAAGGATACAA+AGG | - | chr3_2:56676792-56676811 | None:intergenic | 40.0% | |
| TTTGTATCCTTGAGGTGGTT+TGG | + | chr3_2:56676791-56676810 | Msa0412830:intron | 40.0% | |
| ! | TTTTGCACTGTGCACTAATG+AGG | + | chr3_2:56676834-56676853 | Msa0412830:intron | 40.0% |
| GAACTTTGCAGCATATGAAC+AGG | + | chr3_2:56676890-56676909 | Msa0412830:intron | 40.0% | |
| ! | GCAGCATATGAACAGGTTTT+TGG | + | chr3_2:56676897-56676916 | Msa0412830:intron | 40.0% |
| !!! | GAACAGGTTTTTGGTGATTG+AGG | + | chr3_2:56676906-56676925 | Msa0412830:intron | 40.0% |
| AAAGGAAACAGGTGGTGATT+AGG | + | chr3_2:56677038-56677057 | Msa0412830:intron | 40.0% | |
| ATGTTGTAATGGTCCTGCAT+TGG | + | chr3_2:56677095-56677114 | Msa0412830:intron | 40.0% | |
| ! | TTTTCGAACTTGAACTGCAG+AGG | + | chr3_2:56677225-56677244 | Msa0412830:intron | 40.0% |
| CAACTGACCTTGACCTAATA+TGG | - | chr3_2:56677308-56677327 | None:intergenic | 40.0% | |
| CATATTAGGTCAAGGTCAGT+TGG | + | chr3_2:56677306-56677325 | Msa0412830:CDS | 40.0% | |
| !! | CTTGAAATCTCTGAAGCATG+AGG | - | chr3_2:56677363-56677382 | None:intergenic | 40.0% |
| CATGCTTCAGAGATTTCAAG+AGG | + | chr3_2:56677363-56677382 | Msa0412830:CDS | 40.0% | |
| ! | GATATAGCGGGAAATGAACA+GGG | - | chr3_2:56677533-56677552 | None:intergenic | 40.0% |
| ! | TGATATAGCGGGAAATGAAC+AGG | - | chr3_2:56677534-56677553 | None:intergenic | 40.0% |
| GGAACTCAAGATGATATAGC+GGG | - | chr3_2:56677545-56677564 | None:intergenic | 40.0% | |
| CGGAACTCAAGATGATATAG+CGG | - | chr3_2:56677546-56677565 | None:intergenic | 40.0% | |
| TTAAGCTCTGTTTGGCAGTT+TGG | + | chr3_2:56677605-56677624 | Msa0412830:intron | 40.0% | |
| ! | CTTTGTTTGCAAGTTTGGAG+GGG | - | chr3_2:56677965-56677984 | None:intergenic | 40.0% |
| !! | GCTTTGTTTGCAAGTTTGGA+GGG | - | chr3_2:56677966-56677985 | None:intergenic | 40.0% |
| !!! | CAAAGCCTTAGGCTTTGTTT+TGG | + | chr3_2:56677980-56677999 | Msa0412830:intron | 40.0% |
| !!! | TTGTTTTGGAGTTTGGAGGT+TGG | + | chr3_2:56677994-56678013 | Msa0412830:intron | 40.0% |
| ! | CTTTGGAGGGTTGGAAATAT+GGG | + | chr3_2:56678041-56678060 | Msa0412830:intron | 40.0% |
| !!! | TGTATTGGAGGGTTTTAGAG+GGG | - | chr3_2:56678213-56678232 | None:intergenic | 40.0% |
| GGGGAACTCCAAAATTGTAT+TGG | - | chr3_2:56678228-56678247 | None:intergenic | 40.0% | |
| ACACAAAACCCTCCTCATTT+GGG | - | chr3_2:56678249-56678268 | None:intergenic | 40.0% | |
| AACACAAAACCCTCCTCATT+TGG | - | chr3_2:56678250-56678269 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr3_2:56678373-56678392 | None:intergenic | 40.0% |
| AACTCGCAAACAAAGCCTTA+AGG | + | chr3_2:56678373-56678392 | Msa0412830:intron | 40.0% | |
| ACTCGCAAACAAAGCCTTAA+GGG | + | chr3_2:56678374-56678393 | Msa0412830:intron | 40.0% | |
| AAACAAAGCCTTAAGGGCTA+TGG | + | chr3_2:56678380-56678399 | Msa0412830:intron | 40.0% | |
| ! | GTATGGGGTTTTCATCATAG+AGG | - | chr3_2:56678480-56678499 | None:intergenic | 40.0% |
| GATGAAAACCCCATACGAAA+TGG | + | chr3_2:56678484-56678503 | Msa0412830:intron | 40.0% | |
| ATGAATGTGGCAGTCATGAA+TGG | + | chr3_2:56678513-56678532 | Msa0412830:intron | 40.0% | |
| TGAGGTGGCATATTGTGATT+GGG | - | chr3_2:56678571-56678590 | None:intergenic | 40.0% | |
| ATGAGGTGGCATATTGTGAT+TGG | - | chr3_2:56678572-56678591 | None:intergenic | 40.0% | |
| AACAAAACCTAGCAGCTAGA+CGG | - | chr3_2:56678710-56678729 | None:intergenic | 40.0% | |
| AAGGGGATCTGATAATTCAG+TGG | + | chr3_2:56678956-56678975 | Msa0412830:intron | 40.0% | |
| ! | TGGACTTGGTCATGATATGA+AGG | + | chr3_2:56678976-56678995 | Msa0412830:intron | 40.0% |
| ! | GGACTTGGTCATGATATGAA+GGG | + | chr3_2:56678977-56678996 | Msa0412830:intron | 40.0% |
| TGAAGGGATGTGTCTGAATT+TGG | + | chr3_2:56678993-56679012 | Msa0412830:intron | 40.0% | |
| ACAAGATTCCGCCTATTGTT+TGG | + | chr3_2:56679319-56679338 | Msa0412830:intron | 40.0% | |
| TCCACATCACTCAACTTGAA+TGG | - | chr3_2:56679531-56679550 | None:intergenic | 40.0% | |
| TGCATATGGATCGAATCCAA+GGG | - | chr3_2:56679665-56679684 | None:intergenic | 40.0% | |
| ATGCATATGGATCGAATCCA+AGG | - | chr3_2:56679666-56679685 | None:intergenic | 40.0% | |
| GCTTTAGCTGCTAACTATTG+GGG | + | chr3_2:56679774-56679793 | Msa0412830:CDS | 40.0% | |
| TACAGCAACTTTCACTGCTT+GGG | - | chr3_2:56679814-56679833 | None:intergenic | 40.0% | |
| ATACAGCAACTTTCACTGCT+TGG | - | chr3_2:56679815-56679834 | None:intergenic | 40.0% | |
| GCTTGTATCCTAACCAAATC+AGG | - | chr3_2:56679858-56679877 | None:intergenic | 40.0% | |
| TAGAGAATCAAGCTTCTCAG+AGG | + | chr3_2:56679889-56679908 | Msa0412830:CDS | 40.0% | |
| AGAGAATCAAGCTTCTCAGA+GGG | + | chr3_2:56679890-56679909 | Msa0412830:CDS | 40.0% | |
| GTATGTCAAAGGGGTAGTTA+AGG | + | chr3_2:56679962-56679981 | Msa0412830:intron | 40.0% | |
| AATGAGTGTCCTCTGACAAA+AGG | - | chr3_2:56680004-56680023 | None:intergenic | 40.0% | |
| ! | AGACACGGTTGATGTTAAGA+TGG | + | chr3_2:56680109-56680128 | Msa0412830:intron | 40.0% |
| !!! | AAAATTTTTTGGGTGGGGGA+GGG | - | chr3_2:56680457-56680476 | None:intergenic | 40.0% |
| !!! | AAAAATTTTTTGGGTGGGGG+AGG | - | chr3_2:56680458-56680477 | None:intergenic | 40.0% |
| AATTACTCAGTCTGTTTGGC+TGG | + | chr3_2:56680513-56680532 | Msa0412830:intron | 40.0% | |
| TTGGCTGGATTCATATTCAG+TGG | + | chr3_2:56680528-56680547 | Msa0412830:intron | 40.0% | |
| CAGGCAAATACAAACTCTTG+CGG | - | chr3_2:56680796-56680815 | None:intergenic | 40.0% | |
| !! | GCCCTTAAGCCTTGTTATCA+TGG | + | chr3_2:56674678-56674697 | Msa0412830:CDS | 45.0% |
| TCTGAACATGTCGACGATAC+TGG | + | chr3_2:56674724-56674743 | Msa0412830:CDS | 45.0% | |
| CTGAACATGTCGACGATACT+GGG | + | chr3_2:56674725-56674744 | Msa0412830:CDS | 45.0% | |
| AACATCACTGATGTCGACGA+CGG | - | chr3_2:56674782-56674801 | None:intergenic | 45.0% | |
| ! | TGCAGACATGGCATTGAAGA+AGG | + | chr3_2:56674986-56675005 | Msa0412830:intron | 45.0% |
| ! | AGACATGGCATTGAAGAAGG+TGG | + | chr3_2:56674989-56675008 | Msa0412830:intron | 45.0% |
| CATAGGAGCTATTATGCACG+TGG | - | chr3_2:56675037-56675056 | None:intergenic | 45.0% | |
| CGTCACATATTCCTCCACAA+CGG | + | chr3_2:56675611-56675630 | Msa0412830:CDS | 45.0% | |
| ATGGGATCAAACCCTAGATG+AGG | + | chr3_2:56675729-56675748 | Msa0412830:CDS | 45.0% | |
| GGGGGACAAAGATTCTATCT+TGG | + | chr3_2:56676405-56676424 | Msa0412830:intron | 45.0% | |
| TGAGGATCCACTGAGTTGTT+TGG | + | chr3_2:56676482-56676501 | Msa0412830:intron | 45.0% | |
| GAGGATCCACTGAGTTGTTT+GGG | + | chr3_2:56676483-56676502 | Msa0412830:intron | 45.0% | |
| AGGATCCACTGAGTTGTTTG+GGG | + | chr3_2:56676484-56676503 | Msa0412830:intron | 45.0% | |
| !! | ATGTTGGAGCGTTTTGAACC+TGG | + | chr3_2:56676562-56676581 | Msa0412830:intron | 45.0% |
| CTCAAGTGCTAGAGAGATTC+TGG | + | chr3_2:56676711-56676730 | Msa0412830:intron | 45.0% | |
| ! | ATCCTTGAGGTGGTTTGGAT+TGG | + | chr3_2:56676796-56676815 | Msa0412830:intron | 45.0% |
| ATCCAATCCAAACCACCTCA+AGG | - | chr3_2:56676801-56676820 | None:intergenic | 45.0% | |
| CATATGCTGCAAAGTTCTGC+AGG | - | chr3_2:56676887-56676906 | None:intergenic | 45.0% | |
| AGAGAGACAAGGGTCAAACA+TGG | + | chr3_2:56677275-56677294 | Msa0412830:CDS | 45.0% | |
| GAGAGACAAGGGTCAAACAT+GGG | + | chr3_2:56677276-56677295 | Msa0412830:CDS | 45.0% | |
| ACATGGGCTTCTCCCATATT+AGG | + | chr3_2:56677292-56677311 | Msa0412830:CDS | 45.0% | |
| GCTTCTCCCATATTAGGTCA+AGG | + | chr3_2:56677298-56677317 | Msa0412830:CDS | 45.0% | |
| GCTTCAGAGATTTCAAGAGG+AGG | + | chr3_2:56677366-56677385 | Msa0412830:CDS | 45.0% | |
| !! | GGATTTTAGAGGGTTTCGGA+TGG | - | chr3_2:56677797-56677816 | None:intergenic | 45.0% |
| !!! | AGAGAGTTTTGGAAAGGGGA+GGG | - | chr3_2:56677888-56677907 | None:intergenic | 45.0% |
| !!! | TAGAGAGTTTTGGAAAGGGG+AGG | - | chr3_2:56677889-56677908 | None:intergenic | 45.0% |
| !! | GGCTTTGTTTGCAAGTTTGG+AGG | - | chr3_2:56677967-56677986 | None:intergenic | 45.0% |
| !!! | GGCTTTGTTTTGGAGTTTGG+AGG | + | chr3_2:56677990-56678009 | Msa0412830:intron | 45.0% |
| !!! | TTTTGGAGTTTGGAGGTTGG+AGG | + | chr3_2:56677997-56678016 | Msa0412830:intron | 45.0% |
| ! | TTTGGAGTTTGGAGGTTGGA+GGG | + | chr3_2:56677998-56678017 | Msa0412830:intron | 45.0% |
| !! | GCTTTGGAGGGTTGGAAATA+TGG | + | chr3_2:56678040-56678059 | Msa0412830:intron | 45.0% |
| !!! | GTATTGGAGGGTTTTAGAGG+GGG | - | chr3_2:56678212-56678231 | None:intergenic | 45.0% |
| !!! | TTTTGGAGTTCCCCCAAATG+AGG | + | chr3_2:56678234-56678253 | Msa0412830:intron | 45.0% |
| ACAAAACCCTCCTCATTTGG+GGG | - | chr3_2:56678247-56678266 | None:intergenic | 45.0% | |
| CACAAAACCCTCCTCATTTG+GGG | - | chr3_2:56678248-56678267 | None:intergenic | 45.0% | |
| TAGATGATGTTGAGAGGGGA+AGG | - | chr3_2:56678297-56678316 | None:intergenic | 45.0% | |
| GGGGAGAGGTTTGGAAAAAA+AGG | - | chr3_2:56678339-56678358 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr3_2:56678368-56678387 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr3_2:56678369-56678388 | None:intergenic | 45.0% |
| TTGCATTGCCATAGCCCTTA+AGG | - | chr3_2:56678391-56678410 | None:intergenic | 45.0% | |
| ACAAACTTGGTCAAGACACG+AGG | + | chr3_2:56678794-56678813 | Msa0412830:intron | 45.0% | |
| GTCATTTGTAACAGCCCTGA+CGG | - | chr3_2:56678869-56678888 | None:intergenic | 45.0% | |
| !! | GCCATTCAAGTTGAGTGATG+TGG | + | chr3_2:56679527-56679546 | Msa0412830:CDS | 45.0% |
| TCAATTTCTCCAGCTGGATC+TGG | + | chr3_2:56679711-56679730 | Msa0412830:CDS | 45.0% | |
| GATAGATGTAGGGCTGAGAT+TGG | + | chr3_2:56679747-56679766 | Msa0412830:CDS | 45.0% | |
| TTCTCAGAGGGTCTTGGAAA+AGG | + | chr3_2:56679902-56679921 | Msa0412830:CDS | 45.0% | |
| TTCTGAGTATACCCTCCCTA+AGG | - | chr3_2:56679935-56679954 | None:intergenic | 45.0% | |
| TACCTACGCTTTGTGCAGTT+TGG | + | chr3_2:56680155-56680174 | Msa0412830:intron | 45.0% | |
| CTTTGTGCAGTTTGGCAAGT+TGG | + | chr3_2:56680163-56680182 | Msa0412830:intron | 45.0% | |
| TTCACATGAGCATGGCAAGT+TGG | - | chr3_2:56680269-56680288 | None:intergenic | 45.0% | |
| AACTTGCCATGCTCATGTGA+AGG | + | chr3_2:56680268-56680287 | Msa0412830:intron | 45.0% | |
| TGATCGAATTCCACCCATGA+AGG | - | chr3_2:56680761-56680780 | None:intergenic | 45.0% | |
| ! | AACAGACTTTTGGCATCCTC+TGG | + | chr3_2:56680922-56680941 | Msa0412830:three_prime_UTR | 45.0% |
| ATCTTTCGACTGCCCTTTGT+TGG | + | chr3_2:56680952-56680971 | Msa0412830:three_prime_UTR | 45.0% | |
| TATCTGGCTAGGTGATCCAT+AGG | - | chr3_2:56681063-56681082 | None:intergenic | 45.0% | |
| !! | TAAAACAAAAAATAAATAAA+TGG | + | chr3_2:56675288-56675307 | Msa0412830:intron | 5.0% |
| !! | AAAAAAAAAAAAAAAAAAGA+AGG | - | chr3_2:56677927-56677946 | None:intergenic | 5.0% |
| !! | AAAATAATGTATTAATAAAA+TGG | - | chr3_2:56679366-56679385 | None:intergenic | 5.0% |
| !!! | ATACATTATTTTAATAAATA+AGG | + | chr3_2:56679374-56679393 | Msa0412830:intron | 5.0% |
| CATGTCGACGATACTGGGTT+TGG | + | chr3_2:56674730-56674749 | Msa0412830:CDS | 50.0% | |
| ! | GGCATTGAAGAAGGTGGTGA+TGG | + | chr3_2:56674995-56675014 | Msa0412830:CDS | 50.0% |
| ! | AAGGTGTCTCGTGTCCAACA+TGG | - | chr3_2:56676201-56676220 | None:intergenic | 50.0% |
| GGATCCACTGAGTTGTTTGG+GGG | + | chr3_2:56676485-56676504 | Msa0412830:intron | 50.0% | |
| !! | TTGGAGCGTTTTGAACCTGG+AGG | + | chr3_2:56676565-56676584 | Msa0412830:intron | 50.0% |
| AAACGCTAAATCCAGCCTCC+AGG | - | chr3_2:56676583-56676602 | None:intergenic | 50.0% | |
| AGGATACAAAGGCAGACCAC+AGG | - | chr3_2:56676781-56676800 | None:intergenic | 50.0% | |
| GGTCTGCCTTTGTATCCTTG+AGG | + | chr3_2:56676783-56676802 | Msa0412830:intron | 50.0% | |
| CTGCCTTTGTATCCTTGAGG+TGG | + | chr3_2:56676786-56676805 | Msa0412830:intron | 50.0% | |
| GTGATTGAGGTCCAGTCTTG+TGG | + | chr3_2:56676919-56676938 | Msa0412830:intron | 50.0% | |
| ! | ATTGAGGTCCAGTCTTGTGG+TGG | + | chr3_2:56676922-56676941 | Msa0412830:intron | 50.0% |
| ! | TTGAGGTCCAGTCTTGTGGT+GGG | + | chr3_2:56676923-56676942 | Msa0412830:intron | 50.0% |
| GGATTACAACGAGCCAATGC+AGG | - | chr3_2:56677111-56677130 | None:intergenic | 50.0% | |
| AGCTCTGTTTGGCAGTTTGG+AGG | + | chr3_2:56677608-56677627 | Msa0412830:intron | 50.0% | |
| GCTCTGTTTGGCAGTTTGGA+GGG | + | chr3_2:56677609-56677628 | Msa0412830:intron | 50.0% | |
| CTCTGTTTGGCAGTTTGGAG+GGG | + | chr3_2:56677610-56677629 | Msa0412830:intron | 50.0% | |
| AGGGGAGGGTTATGAGAGAT+TGG | + | chr3_2:56677628-56677647 | Msa0412830:intron | 50.0% | |
| !! | TTTTGGAAAGGGGAGGGCTT+TGG | - | chr3_2:56677882-56677901 | None:intergenic | 50.0% |
| TTTGCAAGTTTGGAGGGGAG+GGG | - | chr3_2:56677960-56677979 | None:intergenic | 50.0% | |
| GTTTGCAAGTTTGGAGGGGA+GGG | - | chr3_2:56677961-56677980 | None:intergenic | 50.0% | |
| TGTTTGCAAGTTTGGAGGGG+AGG | - | chr3_2:56677962-56677981 | None:intergenic | 50.0% | |
| TTGGAGTTTGGAGGTTGGAG+GGG | + | chr3_2:56677999-56678018 | Msa0412830:intron | 50.0% | |
| !!! | GGTTTTAGAGGGGGTTTGGA+GGG | - | chr3_2:56678203-56678222 | None:intergenic | 50.0% |
| TTTGCGAGTTTGGAGGGGAA+GGG | - | chr3_2:56678363-56678382 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr3_2:56678370-56678389 | None:intergenic | 50.0% |
| ACATGGTGAGGTGACAAGCA+AGG | + | chr3_2:56679233-56679252 | Msa0412830:intron | 50.0% | |
| AGGTGACAAGCAAGGCAACA+TGG | + | chr3_2:56679241-56679260 | Msa0412830:intron | 50.0% | |
| GGTGACAAGCAAGGCAACAT+GGG | + | chr3_2:56679242-56679261 | Msa0412830:intron | 50.0% | |
| GGTGAGGAATGCACACATCT+TGG | - | chr3_2:56679644-56679663 | None:intergenic | 50.0% | |
| ATGTGTGCATTCCTCACCCT+TGG | + | chr3_2:56679646-56679665 | Msa0412830:CDS | 50.0% | |
| ATGGATCGAATCCAAGGGTG+AGG | - | chr3_2:56679660-56679679 | None:intergenic | 50.0% | |
| TCATCATCACCAGATCCAGC+TGG | - | chr3_2:56679723-56679742 | None:intergenic | 50.0% | |
| GCTGCTAACTATTGGGGTCA+AGG | + | chr3_2:56679780-56679799 | Msa0412830:CDS | 50.0% | |
| TCAAGCTTCTCAGAGGGTCT+TGG | + | chr3_2:56679896-56679915 | Msa0412830:CDS | 50.0% | |
| AGAGGGTCTTGGAAAAGGCT+GGG | + | chr3_2:56679907-56679926 | Msa0412830:CDS | 50.0% | |
| TGGAAAAGGCTGGGTTCCTT+AGG | + | chr3_2:56679916-56679935 | Msa0412830:CDS | 50.0% | |
| GGAAAAGGCTGGGTTCCTTA+GGG | + | chr3_2:56679917-56679936 | Msa0412830:CDS | 50.0% | |
| GTGACTACTGTGGGTAGACA+CGG | + | chr3_2:56680094-56680113 | Msa0412830:intron | 50.0% | |
| TGCCAAACTGCACAAAGCGT+AGG | - | chr3_2:56680160-56680179 | None:intergenic | 50.0% | |
| GGACTTCCTTCACATGAGCA+TGG | - | chr3_2:56680277-56680296 | None:intergenic | 50.0% | |
| ! | GTTGTGCCTTTTGCAGAACC+CGG | + | chr3_2:56680684-56680703 | Msa0412830:intron | 50.0% |
| ! | TTGTGCCTTTTGCAGAACCC+GGG | + | chr3_2:56680685-56680704 | Msa0412830:intron | 50.0% |
| CAAAACCCGGGTTCTGCAAA+AGG | - | chr3_2:56680693-56680712 | None:intergenic | 50.0% | |
| ATTCCACCCATGAAGGTCCT+CGG | - | chr3_2:56680754-56680773 | None:intergenic | 50.0% | |
| TCCACTGAGTTGTTTGGGGG+TGG | + | chr3_2:56676488-56676507 | Msa0412830:intron | 55.0% | |
| ACCACCCCCAAACAACTCAG+TGG | - | chr3_2:56676492-56676511 | None:intergenic | 55.0% | |
| !! | AGCGTTTTGAACCTGGAGGC+TGG | + | chr3_2:56676569-56676588 | Msa0412830:intron | 55.0% |
| CACTGTGCACTAATGAGGCG+AGG | + | chr3_2:56676839-56676858 | Msa0412830:intron | 55.0% | |
| GCGAGGCTTGCAATCTTCTG+AGG | + | chr3_2:56676856-56676875 | Msa0412830:intron | 55.0% | |
| CTCTCAACCCACCACAAGAC+TGG | - | chr3_2:56676933-56676952 | None:intergenic | 55.0% | |
| GGGTTGAGAGTGACCTTGCT+TGG | + | chr3_2:56676943-56676962 | Msa0412830:intron | 55.0% | |
| TGTTTGGCAGTTTGGAGGGG+AGG | + | chr3_2:56677613-56677632 | Msa0412830:intron | 55.0% | |
| GTTTGGCAGTTTGGAGGGGA+GGG | + | chr3_2:56677614-56677633 | Msa0412830:intron | 55.0% | |
| AGTTTGGAGGTTGGAGGGGA+GGG | + | chr3_2:56678003-56678022 | Msa0412830:intron | 55.0% | |
| GGAAAGGGAAGGGAAGGCTT+TGG | + | chr3_2:56678024-56678043 | Msa0412830:intron | 55.0% | |
| ! | AAGGGAAGGGAAGGCTTTGG+AGG | + | chr3_2:56678027-56678046 | Msa0412830:intron | 55.0% |
| !! | AGGGAAGGGAAGGCTTTGGA+GGG | + | chr3_2:56678028-56678047 | Msa0412830:intron | 55.0% |
| !! | AAGGGAAGGCTTTGGAGGGT+TGG | + | chr3_2:56678032-56678051 | Msa0412830:intron | 55.0% |
| !!! | GGGTTTTAGAGGGGGTTTGG+AGG | - | chr3_2:56678204-56678223 | None:intergenic | 55.0% |
| !!! | GGAGGGTTTTAGAGGGGGTT+TGG | - | chr3_2:56678207-56678226 | None:intergenic | 55.0% |
| TGGAGTTCCCCCAAATGAGG+AGG | + | chr3_2:56678237-56678256 | Msa0412830:intron | 55.0% | |
| GGAGTTCCCCCAAATGAGGA+GGG | + | chr3_2:56678238-56678257 | Msa0412830:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr3_2:56678364-56678383 | None:intergenic | 55.0% | |
| CATCTGTCCGTCTAGCTGCT+AGG | + | chr3_2:56678700-56678719 | Msa0412830:intron | 55.0% | |
| CAGAGGGTCTTGGAAAAGGC+TGG | + | chr3_2:56679906-56679925 | Msa0412830:CDS | 55.0% | |
| AAAGGCTGGGTTCCTTAGGG+AGG | + | chr3_2:56679920-56679939 | Msa0412830:CDS | 55.0% | |
| AAGGCTGGGTTCCTTAGGGA+GGG | + | chr3_2:56679921-56679940 | Msa0412830:CDS | 55.0% | |
| GTGGAAACTGTCCTGATCCG+AGG | + | chr3_2:56680734-56680753 | Msa0412830:CDS | 55.0% | |
| TCCTGATCCGAGGACCTTCA+TGG | + | chr3_2:56680744-56680763 | Msa0412830:CDS | 55.0% | |
| CCTGATCCGAGGACCTTCAT+GGG | + | chr3_2:56680745-56680764 | Msa0412830:CDS | 55.0% | |
| ! | TGGAAAGGGGAGGGCTTTGG+AGG | - | chr3_2:56677879-56677898 | None:intergenic | 60.0% |
| CAAGTTTGGAGGGGAGGGGA+GGG | - | chr3_2:56677956-56677975 | None:intergenic | 60.0% | |
| GAGTTTGGAGGTTGGAGGGG+AGG | + | chr3_2:56678002-56678021 | Msa0412830:intron | 60.0% | |
| GAGGTTGGAGGGGAGGGAAA+GGG | + | chr3_2:56678009-56678028 | Msa0412830:intron | 60.0% | |
| TTGGAGGGGAGGGAAAGGGA+AGG | + | chr3_2:56678013-56678032 | Msa0412830:intron | 60.0% | |
| TGGAGGGGAGGGAAAGGGAA+GGG | + | chr3_2:56678014-56678033 | Msa0412830:intron | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr3_2:56678358-56678377 | None:intergenic | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | - | chr3_2:56678359-56678378 | None:intergenic | 60.0% | |
| CCCATGAAGGTCCTCGGATC+AGG | - | chr3_2:56680748-56680767 | None:intergenic | 60.0% | |
| GATCCGAGGACCTTCATGGG+TGG | + | chr3_2:56680748-56680767 | Msa0412830:CDS | 60.0% | |
| GCAAGTTTGGAGGGGAGGGG+AGG | - | chr3_2:56677957-56677976 | None:intergenic | 65.0% | |
| GGAGGTTGGAGGGGAGGGAA+AGG | + | chr3_2:56678008-56678027 | Msa0412830:intron | 65.0% | |
| GGGGAGGGAAAGGGAAGGGA+AGG | + | chr3_2:56678018-56678037 | Msa0412830:intron | 65.0% | |
| GGGAAGGGAGGGGAGAGGTT+TGG | - | chr3_2:56678348-56678367 | None:intergenic | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | - | chr3_2:56678360-56678379 | None:intergenic | 65.0% | |
| TGGAGGGGAGGGGAGGGCTT+TGG | - | chr3_2:56677950-56677969 | None:intergenic | 70.0% | |
| TGGAGGGGAAGGGAGGGGAG+AGG | - | chr3_2:56678353-56678372 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 56674649 | 56681114 | 56674649 | ID=Msa0412830;Name=Msa0412830 |
| chr3_2 | mRNA | 56674649 | 56681114 | 56674649 | ID=Msa0412830-mRNA-1;Parent=Msa0412830;Name=Msa0412830-mRNA-1;_AED=0.17;_eAED=0.26;_QI=0|0.37|0.44|0.77|1|1|9|328|444 |
| chr3_2 | exon | 56674649 | 56674755 | 56674649 | ID=Msa0412830-mRNA-1:exon:11559;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56674991 | 56675024 | 56674991 | ID=Msa0412830-mRNA-1:exon:11560;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56675404 | 56675632 | 56675404 | ID=Msa0412830-mRNA-1:exon:11561;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56675713 | 56675861 | 56675713 | ID=Msa0412830-mRNA-1:exon:11562;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56675957 | 56676005 | 56675957 | ID=Msa0412830-mRNA-1:exon:11563;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56677245 | 56677387 | 56677245 | ID=Msa0412830-mRNA-1:exon:11564;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56677468 | 56677517 | 56677468 | ID=Msa0412830-mRNA-1:exon:11565;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56679488 | 56679974 | 56679488 | ID=Msa0412830-mRNA-1:exon:11566;Parent=Msa0412830-mRNA-1 |
| chr3_2 | exon | 56680700 | 56681114 | 56680700 | ID=Msa0412830-mRNA-1:exon:11567;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56674649 | 56674755 | 56674649 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56674991 | 56675024 | 56674991 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56675404 | 56675632 | 56675404 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56675713 | 56675861 | 56675713 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56675957 | 56676005 | 56675957 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56677245 | 56677387 | 56677245 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56677468 | 56677517 | 56677468 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56679488 | 56679974 | 56679488 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | CDS | 56680700 | 56680786 | 56680700 | ID=Msa0412830-mRNA-1:cds;Parent=Msa0412830-mRNA-1 |
| chr3_2 | three_prime_UTR | 56680787 | 56681114 | 56680787 | ID=Msa0412830-mRNA-1:three_prime_utr;Parent=Msa0412830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
