AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0413000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413000 MtrunA17_Chr1g0187591 54.772 482 151 7 131 560 187 653 1.38e-147 440
Msa0413000 MtrunA17_Chr1g0187591 74.419 86 22 0 15 100 460 545 5.06e-31 128
Msa0413000 MtrunA17_Chr3g0105151 79.592 245 42 1 334 578 1 237 8.72e-135 392
Msa0413000 MtrunA17_Chr3g0105151 58.763 97 25 3 15 96 70 166 4.67e-23 98.2
Msa0413000 MtrunA17_Chr3g0105121 56.878 378 133 5 172 548 8 356 4.73e-134 395
Msa0413000 MtrunA17_Chr3g0105121 55.172 87 30 2 16 93 242 328 2.81e-15 77.8
Msa0413000 MtrunA17_Chr3g0105131 55.416 397 143 8 136 532 143 505 4.51e-122 369
Msa0413000 MtrunA17_Chr3g0105131 74.419 86 20 1 15 100 396 479 4.30e-31 127
Msa0413000 MtrunA17_Chr5g0430211 45.181 498 194 16 139 571 197 680 9.99e-109 341
Msa0413000 MtrunA17_Chr3g0105101 57.439 289 91 4 129 417 145 401 1.11e-96 300
Msa0413000 MtrunA17_Chr5g0437251 41.165 515 218 18 118 569 166 658 2.32e-96 308
Msa0413000 MtrunA17_Chr3g0105141 86.207 145 20 0 138 282 1 145 2.45e-92 280
Msa0413000 MtrunA17_Chr3g0113651 40.596 436 165 16 137 550 122 485 1.50e-76 251
Msa0413000 MtrunA17_Chr7g0257831 36.797 462 206 14 150 550 241 677 8.19e-69 236
Msa0413000 MtrunA17_Chr3g0088521 44.523 283 126 6 150 407 241 517 1.39e-65 227
Msa0413000 MtrunA17_Chr1g0171151 40.590 271 139 6 153 407 224 488 3.31e-54 194
Msa0413000 MtrunA17_Chr3g0092171 53.846 169 70 2 152 320 254 414 1.83e-49 179
Msa0413000 MtrunA17_Chr3g0092221 50.282 177 82 4 150 325 137 308 7.36e-49 174
Msa0413000 MtrunA17_Chr6g0487481 56.757 111 47 1 167 277 97 206 8.97e-42 154
Msa0413000 MtrunA17_Chr8g0389561 51.562 128 61 1 169 296 77 203 5.06e-40 150
Msa0413000 MtrunA17_Chr2g0324781 57.143 112 47 1 173 284 77 187 9.00e-40 150
Msa0413000 MtrunA17_Chr3g0135351 49.618 131 63 3 163 291 43 172 1.65e-37 140
Msa0413000 MtrunA17_Chr4g0040391 53.211 109 50 1 169 277 56 163 2.37e-36 138
Msa0413000 MtrunA17_Chr3g0105111 49.565 115 40 4 464 578 1 97 1.10e-20 87.4
Msa0413000 MtrunA17_Chr3g0105111 45.872 109 14 2 63 126 2 110 7.44e-18 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413000 AT5G58620.1 44.286 420 202 14 150 554 186 588 3.31e-91 293
Msa0413000 AT2G40140.2 40.587 409 199 11 149 553 190 558 3.00e-80 264
Msa0413000 AT2G40140.1 40.587 409 199 11 149 553 190 558 3.00e-80 264
Msa0413000 AT3G55980.1 41.337 404 180 16 155 550 193 547 4.56e-76 252
Msa0413000 AT3G55980.2 41.337 404 180 16 155 550 260 614 2.09e-75 252
Msa0413000 AT2G41900.1 48.134 268 116 7 152 407 240 496 3.28e-70 240
Msa0413000 AT5G12850.1 37.947 419 192 17 150 514 234 638 1.45e-67 233
Msa0413000 AT5G07500.1 57.377 122 51 1 155 276 34 154 5.75e-46 162
Msa0413000 AT2G19810.1 48.366 153 63 2 158 310 63 199 1.26e-43 159
Msa0413000 AT4G29190.1 55.556 117 51 1 162 278 68 183 1.68e-42 156
Msa0413000 AT2G25900.2 58.182 110 45 1 169 278 86 194 3.51e-42 154
Msa0413000 AT2G25900.1 58.182 110 45 1 169 278 86 194 3.51e-42 154
Msa0413000 AT1G03790.1 51.538 130 58 3 166 291 75 203 4.91e-38 145
Msa0413000 AT5G44260.1 51.562 128 56 3 152 278 43 165 4.31e-37 142

Find 141 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGTCCCTTTGCTCATTC+TGG 0.150818 3_2:+57115111 Msa0413000:CDS
GCCTTCTACTTTCTCTGATT+GGG 0.197083 3_2:+57113115 Msa0413000:CDS
CAACTGTAATAATATTTCTT+TGG 0.259700 3_2:-57115156 None:intergenic
ATGAAACATCGTCCGGATTA+TGG 0.271301 3_2:-57116238 None:intergenic
TCATATCTTGAATTCATAAA+TGG 0.281986 3_2:-57115852 None:intergenic
CTTCTCCCTTGAGGCAATCT+TGG 0.284448 3_2:-57114909 None:intergenic
AGCCTTCTACTTTCTCTGAT+TGG 0.288690 3_2:+57113114 Msa0413000:CDS
ATGGAACATCGTCCGGATTA+TGG 0.301107 3_2:-57111333 None:intergenic
GAAGAGTCAAATAGGCTTGC+AGG 0.316240 3_2:+57115675 Msa0413000:CDS
CTTCTACTGCCTTCTCTGAT+TGG 0.322323 3_2:+57115970 Msa0413000:CDS
CATTATTAAGCCAGGAATCT+TGG 0.322794 3_2:+57116135 Msa0413000:CDS
TATATAATACAGATGAATTT+AGG 0.325192 3_2:+57115031 Msa0413000:CDS
TGAGTGGATCACAACAATTC+AGG 0.326132 3_2:+57112994 Msa0413000:CDS
TGATCCACTCACATTTGAAT+TGG 0.333758 3_2:-57112982 None:intergenic
CTATTTGACTCTTCTATCAT+TGG 0.335001 3_2:-57115666 None:intergenic
CTTTCCGATTCAAATGTGAT+TGG 0.358142 3_2:+57115807 Msa0413000:CDS
TAGAGTAGCCACACAGTTCT+TGG 0.359782 3_2:-57115779 None:intergenic
CAATGATAGAAGAGTCAAAT+AGG 0.360308 3_2:+57115667 Msa0413000:CDS
GGACACAAATCAGCAACTTT+GGG 0.371746 3_2:+57112941 Msa0413000:CDS
GGGACACAAATCAGCAACTT+TGG 0.388854 3_2:+57112940 Msa0413000:CDS
GTGAGCTAACCCAAGATTCC+TGG 0.390717 3_2:-57116145 None:intergenic
TAGTCTTTCTTCATACTTCG+AGG 0.412316 3_2:-57114970 None:intergenic
ATGACCCGAAAATGTCTTCA+TGG 0.413038 3_2:-57115713 None:intergenic
TTCAACAGGCGAAGCTCCTC+GGG 0.413095 3_2:-57115342 None:intergenic
CGAGGAGCTTCGCCTGTTGA+AGG 0.414602 3_2:+57115344 Msa0413000:CDS
AATGTCCCTTTGCTCATTCT+GGG 0.417384 3_2:+57115112 Msa0413000:CDS
AAAATGTCTTCATGGTTAGT+AGG 0.419191 3_2:-57115705 None:intergenic
ATCTGCTACCTTAGTTGCCA+TGG 0.427041 3_2:+57113091 Msa0413000:CDS
ATTATTAAGCCAGGAATCTT+GGG 0.427376 3_2:+57116136 Msa0413000:CDS
TCTGATTGGGGCTCCCCTGA+TGG 0.429199 3_2:+57113128 Msa0413000:CDS
CCCCAATCAGAGAAAGTAGA+AGG 0.430324 3_2:-57113116 None:intergenic
TGCTCCATGTACAATTTCTC+TGG 0.430560 3_2:-57113317 None:intergenic
ATGACGACATCTTATTCATT+CGG 0.431815 3_2:+57116047 Msa0413000:CDS
CTCATTCTGGGGAAATTGCA+AGG 0.434253 3_2:+57115124 Msa0413000:CDS
TGCCACATGGTTCCTCCTGC+AGG 0.436089 3_2:-57115513 None:intergenic
AACTGGTATAAGCCTTCAAC+AGG 0.439127 3_2:-57115356 None:intergenic
TATACCTCATTCTTTATGTC+AGG 0.439563 3_2:-57115012 None:intergenic
AGCTAAGATGGAACATCGTC+CGG 0.446127 3_2:-57111340 None:intergenic
CAATCAGAGAAGGCAGTAGA+AGG 0.448046 3_2:-57115969 None:intergenic
CTTCAACAGGCGAAGCTCCT+CGG 0.466146 3_2:-57115343 None:intergenic
TCAAAGTGAAACTTTGCTCA+TGG 0.468456 3_2:+57115064 Msa0413000:CDS
CATTGTTATGAATTTCAGAA+TGG 0.474142 3_2:+57115183 Msa0413000:CDS
TGTTGATCAGATTCCAATGT+TGG 0.474488 3_2:-57116185 None:intergenic
AGAAGGCTCCATGGCAACTA+AGG 0.474619 3_2:-57113099 None:intergenic
CAGAATGGATCATGCAGTAG+AGG 0.475417 3_2:+57115198 Msa0413000:CDS
AGGTGAAGGAAAAGCAGAAC+TGG 0.477528 3_2:-57115373 None:intergenic
AACCTTGTTCTGTATTGAGC+AGG 0.477792 3_2:-57115267 None:intergenic
CCTTCTACTTTCTCTGATTG+GGG 0.479569 3_2:+57113116 Msa0413000:CDS
CATTTCATTGAGTTTATCAC+CGG 0.482092 3_2:-57116027 None:intergenic
GGCAAAGACGAAACCGCGTC+CGG 0.483229 3_2:-57113296 None:intergenic
GAATTATTCATTATTAAGCC+AGG 0.489175 3_2:+57116127 Msa0413000:CDS
AATAATATTTCTTTGGATCA+CGG 0.489268 3_2:-57115149 None:intergenic
CAAAGTGAAACTTTGCTCAT+GGG 0.491995 3_2:+57115065 Msa0413000:CDS
CCACTGATAGAAAGGTAGAT+TGG 0.492569 3_2:+57115997 Msa0413000:CDS
TTGCTCGGCATCTGAAGTGT+AGG 0.492953 3_2:-57115564 None:intergenic
CTCATTCTTTATGTCAGGTA+GGG 0.495669 3_2:-57115007 None:intergenic
TGATCCAATCACATTTGAAT+CGG 0.499162 3_2:-57115811 None:intergenic
AATCTTCGTCGACACTGCCT+TGG 0.499906 3_2:+57115469 Msa0413000:CDS
GGTGAATTTGAATTTGATGT+AGG 0.501254 3_2:-57115393 None:intergenic
TGCTTCGCTTGATAAAGCTC+TGG 0.511329 3_2:-57115893 None:intergenic
TCAACTTCAATGCCATAATC+CGG 0.511649 3_2:+57111321 Msa0413000:CDS
TCATCGATACAATCTTCAAA+AGG 0.511992 3_2:+57115732 Msa0413000:CDS
GCTCTGGCTCCACTTCGAAA+TGG 0.512667 3_2:-57115877 None:intergenic
TCAACTGCAATGCCATAATC+CGG 0.513945 3_2:+57116226 Msa0413000:CDS
CAAGGGAGAAGGTTTCGAAA+TGG 0.520068 3_2:+57114921 Msa0413000:CDS
CAAGATTGCCTCAAGGGAGA+AGG 0.523740 3_2:+57114910 Msa0413000:CDS
GCTTTATTGAGAGCAATAGC+GGG 0.524886 3_2:+57113045 Msa0413000:CDS
CCTCATTCTTTATGTCAGGT+AGG 0.525459 3_2:-57115008 None:intergenic
TATTGCTCTCAATAAAGCTC+TGG 0.525656 3_2:-57113040 None:intergenic
CAGAACCAAGATTGCCTCAA+GGG 0.525928 3_2:+57114904 Msa0413000:intron
CACATTTGAATCGGAAAGGT+CGG 0.526730 3_2:-57115802 None:intergenic
ACAATCTTCAAAAGGAATGC+TGG 0.527301 3_2:+57115740 Msa0413000:CDS
GAGTGGATCACAACAATTCA+GGG 0.527448 3_2:+57112995 Msa0413000:CDS
ATTGAGTTCATAACCGCGGA+TGG 0.529319 3_2:-57113165 None:intergenic
TTGGTACTCCACTGATAGAA+AGG 0.535177 3_2:+57115989 Msa0413000:CDS
TTGGGTTAGCTCACTTGTGA+AGG 0.535289 3_2:+57116154 Msa0413000:CDS
TTCACCTAGTGTTTCTACAA+TGG 0.539568 3_2:+57115410 Msa0413000:CDS
GGCTAAGATGAAACATCGTC+CGG 0.541200 3_2:-57116245 None:intergenic
CCCCTGATGGAAAATTAGAC+TGG 0.548612 3_2:+57113141 Msa0413000:CDS
GCTCTGGCTCCGTTTCGAAA+AGG 0.548920 3_2:-57113024 None:intergenic
TCAACGGCAATGCTATAATC+CGG 0.551575 3_2:+57113277 Msa0413000:CDS
TGCTCGGCATCTGAAGTGTA+GGG 0.552789 3_2:-57115563 None:intergenic
TTTGAATTGGAAAGATCAGA+AGG 0.554204 3_2:-57112969 None:intergenic
ATTTCCCCAGAATGAGCAAA+GGG 0.558937 3_2:-57115117 None:intergenic
TCTGCAACATCATCTCCTGC+AGG 0.561276 3_2:+57115498 Msa0413000:CDS
AGCTTTATTGAGAGCAATAG+CGG 0.562255 3_2:+57113044 Msa0413000:CDS
TTTGCCAGAGAAATTGTACA+TGG 0.563978 3_2:+57113313 Msa0413000:CDS
AGAATGGATCATGCAGTAGA+GGG 0.565871 3_2:+57115199 Msa0413000:CDS
GATGTTGCAGACGGAGTCCA+AGG 0.569189 3_2:-57115486 None:intergenic
AAACATTGCTAGTATCGTCT+AGG 0.570465 3_2:-57116073 None:intergenic
CTTTCCAATTCAAATGTGAG+TGG 0.571592 3_2:+57112978 Msa0413000:CDS
ATCCAGATGTTGAAGATCAA+CGG 0.576092 3_2:+57113261 Msa0413000:intron
CCAATCTACCTTTCTATCAG+TGG 0.576349 3_2:-57115997 None:intergenic
GAAGTATGAAGAAAGACTAT+CGG 0.576789 3_2:+57114974 Msa0413000:CDS
TTTGAATTTGATGTAGGTGA+AGG 0.577407 3_2:-57115387 None:intergenic
ATGGCAACTAAGGTAGCAGA+TGG 0.578164 3_2:-57113089 None:intergenic
CCTACCTGACATAAAGAATG+AGG 0.581456 3_2:+57115008 Msa0413000:CDS
GGGATAATGCTCCTCATGAG+TGG 0.582183 3_2:+57115085 Msa0413000:CDS
GATTGGATCACCACAACTCA+AGG 0.586241 3_2:+57115824 Msa0413000:CDS
AATTCAACTGAGGTGGCAGA+AGG 0.587216 3_2:-57115942 None:intergenic
TTTCGAAACCTTCTCCCTTG+AGG 0.589169 3_2:-57114918 None:intergenic
CAATCACATTTGAATCGGAA+AGG 0.598213 3_2:-57115806 None:intergenic
ATCCTGCTCAATACAGAACA+AGG 0.601756 3_2:+57115265 Msa0413000:CDS
CATTCTGAAATTCATAACAA+TGG 0.603085 3_2:-57115182 None:intergenic
AAGGTAGATTGGTCTATCCC+CGG 0.610542 3_2:+57116008 Msa0413000:CDS
AGAGAAAGTAGAAGGCTCCA+TGG 0.611618 3_2:-57113108 None:intergenic
GGACATTCTGTCCACTCATG+AGG 0.613065 3_2:-57115096 None:intergenic
ATGTCCCTTTGCTCATTCTG+GGG 0.613840 3_2:+57115113 Msa0413000:CDS
CTTCTTTGCTCACAAACCCG+AGG 0.614714 3_2:+57115326 Msa0413000:CDS
TACTAGCAATGTTTCAACAA+TGG 0.618393 3_2:+57116082 Msa0413000:CDS
ACTGTAGTATGAATCTGAGT+CGG 0.620110 3_2:-57115540 None:intergenic
AGGCTCTAATTCAACTGAGG+TGG 0.620796 3_2:-57115949 None:intergenic
GAATCCATTGTAGAAACACT+AGG 0.621265 3_2:-57115414 None:intergenic
GAAGATTGTATCAAAGAAGA+CGG 0.623170 3_2:-57115453 None:intergenic
GACACAAATCAGCAACTTTG+GGG 0.625154 3_2:+57112942 Msa0413000:CDS
ACAGAACCAAGATTGCCTCA+AGG 0.634336 3_2:+57114903 Msa0413000:intron
AATTTCCCCAGAATGAGCAA+AGG 0.634761 3_2:-57115118 None:intergenic
GCAGGAGATGATGTTGCAGA+CGG 0.635347 3_2:-57115495 None:intergenic
AGTGGAGTACCAATCAGAGA+AGG 0.636735 3_2:-57115979 None:intergenic
GAGAAGCAGAAACAACATGT+AGG 0.638851 3_2:+57114943 Msa0413000:CDS
GTACATGGAGCATAAGCAGA+AGG 0.641793 3_2:+57113328 Msa0413000:CDS
GAAGGATGATGATCCAACAT+TGG 0.647091 3_2:+57116172 Msa0413000:CDS
CTGAGTCGGAGTCTGCCACA+TGG 0.648294 3_2:-57115526 None:intergenic
AAGCAGAAACAACATGTAGG+TGG 0.652560 3_2:+57114946 Msa0413000:CDS
GATATGATGCCATTTCGAAG+TGG 0.655473 3_2:+57115868 Msa0413000:CDS
GTATTGAGCAGGATGAAGCA+AGG 0.657751 3_2:-57115256 None:intergenic
GCAACATCATCTCCTGCAGG+AGG 0.663953 3_2:+57115501 Msa0413000:CDS
CATGGAGCATAAGCAGAAGG+TGG 0.666826 3_2:+57113331 Msa0413000:CDS
AAATTAGACTGGTCCATCCG+CGG 0.671255 3_2:+57113152 Msa0413000:CDS
GAATGGATCATGCAGTAGAG+GGG 0.673342 3_2:+57115200 Msa0413000:CDS
ATTTCATTGAGTTTATCACC+GGG 0.674570 3_2:-57116026 None:intergenic
CTTTATCAAGCGAAGCAGCG+TGG 0.679886 3_2:+57115899 Msa0413000:CDS
CTTTATTGAGAGCAATAGCG+GGG 0.684685 3_2:+57113046 Msa0413000:CDS
AATGGATCAACCTTGAGTTG+TGG 0.691978 3_2:-57115834 None:intergenic
AGAAGGCTCTAATTCAACTG+AGG 0.697808 3_2:-57115952 None:intergenic
GATACATGTCAATATTCACA+TGG 0.715825 3_2:+57115222 Msa0413000:CDS
CCTTACGAAACTCAGGACAA+GGG 0.724349 3_2:+57112920 Msa0413000:intron
TTTCATTGAGTTTATCACCG+GGG 0.737072 3_2:-57116025 None:intergenic
CTCCTGCAGGAGGAACCATG+TGG 0.747414 3_2:+57115511 Msa0413000:CDS
GCAATGCTATAATCCGGACG+CGG 0.749503 3_2:+57113283 Msa0413000:CDS
AATGTGAACCAAGAACTGTG+TGG 0.864927 3_2:+57115771 Msa0413000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGATCTTAATTAAATAT+AGG + chr3_2:57113481-57113500 Msa0413000:intron 10.0%
!! ATAACAAAACAAAGAATTAA+GGG - chr3_2:57111486-57111505 None:intergenic 15.0%
!! AATAACAAAACAAAGAATTA+AGG - chr3_2:57111487-57111506 None:intergenic 15.0%
!! TAAATTGAAATATTGTCATA+AGG + chr3_2:57112014-57112033 Msa0413000:intron 15.0%
!! AAAGAAAAAAAAAAACAAAG+CGG - chr3_2:57112328-57112347 None:intergenic 15.0%
!! TTATATTGAAGAAAGAAATT+CGG - chr3_2:57113852-57113871 None:intergenic 15.0%
!! ATAAAAATAATCACAAACAA+TGG - chr3_2:57114785-57114804 None:intergenic 15.0%
!! TATATAATACAGATGAATTT+AGG + chr3_2:57115031-57115050 Msa0413000:CDS 15.0%
!! CTAAAGTTAAAAAAAATCAC+AGG - chr3_2:57111389-57111408 None:intergenic 20.0%
!! AGAGAGATATTCATTATATT+TGG + chr3_2:57111407-57111426 Msa0413000:intron 20.0%
!! GAGAGATATTCATTATATTT+GGG + chr3_2:57111408-57111427 Msa0413000:intron 20.0%
!! AAGAATTAAGGGAAAAAAAA+TGG - chr3_2:57111475-57111494 None:intergenic 20.0%
!! ATCTATGAAACAATAATTCA+AGG - chr3_2:57111624-57111643 None:intergenic 20.0%
!!! TTCATTTTCGCTTTTTATTA+AGG + chr3_2:57111885-57111904 Msa0413000:intron 20.0%
!!! TTTTTTCTTTTCTATTACGA+AGG + chr3_2:57112338-57112357 Msa0413000:intron 20.0%
!! ACAATGTTTAAACACAAAAA+AGG - chr3_2:57112449-57112468 None:intergenic 20.0%
!! TAATATGATACTAAACAGAA+AGG - chr3_2:57112542-57112561 None:intergenic 20.0%
!! AATTCTGTATAATAATAGAG+AGG + chr3_2:57112589-57112608 Msa0413000:intron 20.0%
!!! GTAATATTTTGCAGAAAATA+TGG + chr3_2:57113503-57113522 Msa0413000:intron 20.0%
!! AAGATATAGAGAGAAAAAAA+AGG - chr3_2:57113620-57113639 None:intergenic 20.0%
!! ATGTTAATACAGATTTAACA+AGG - chr3_2:57113655-57113674 None:intergenic 20.0%
!! AATAATATTTCTTTGGATCA+CGG - chr3_2:57115152-57115171 None:intergenic 20.0%
!! CAACTGTAATAATATTTCTT+TGG - chr3_2:57115159-57115178 None:intergenic 20.0%
!! TCATATCTTGAATTCATAAA+TGG - chr3_2:57115855-57115874 None:intergenic 20.0%
! GAATATGCATATGCTTATAA+TGG + chr3_2:57111538-57111557 Msa0413000:intron 25.0%
!!! ACATGTTTTAACCAAATGAA+GGG - chr3_2:57111588-57111607 None:intergenic 25.0%
!!! TACATGTTTTAACCAAATGA+AGG - chr3_2:57111589-57111608 None:intergenic 25.0%
!!! TACCATTCTCTTTTTTTGAA+TGG + chr3_2:57111956-57111975 Msa0413000:intron 25.0%
!!! TGATGATTTGTTGAATGAAA+TGG - chr3_2:57112102-57112121 None:intergenic 25.0%
! TGACGAAAAGAAAATGATTT+AGG - chr3_2:57112218-57112237 None:intergenic 25.0%
! AAACATTGTTGCAAATTTCT+TGG + chr3_2:57112460-57112479 Msa0413000:intron 25.0%
! AACATTGTTGCAAATTTCTT+GGG + chr3_2:57112461-57112480 Msa0413000:intron 25.0%
! TTTGATTAGGGAAAATGAAT+AGG + chr3_2:57112679-57112698 Msa0413000:intron 25.0%
! TTGATTAGGGAAAATGAATA+GGG + chr3_2:57112680-57112699 Msa0413000:intron 25.0%
! GTTATGAACTCAATAAAATG+AGG + chr3_2:57113174-57113193 Msa0413000:intron 25.0%
! ATGAGGAAATCTTATTCTTT+CGG + chr3_2:57113191-57113210 Msa0413000:intron 25.0%
! TCTAATGTTAACTTTGACAT+TGG + chr3_2:57113360-57113379 Msa0413000:intron 25.0%
! TACTACAAGGATATAGTATA+TGG + chr3_2:57113592-57113611 Msa0413000:intron 25.0%
! ATCCTCAAAATGCAAAATTA+AGG + chr3_2:57113740-57113759 Msa0413000:intron 25.0%
!! ATCCTTAATTTTGCATTTTG+AGG - chr3_2:57113745-57113764 None:intergenic 25.0%
!! GAGGTGTATTTTGTATATAT+TGG - chr3_2:57113902-57113921 None:intergenic 25.0%
! AAAGAAGAACTTACAGAATA+AGG - chr3_2:57114185-57114204 None:intergenic 25.0%
!! TTAGAAAAGATCTCATCTTT+TGG - chr3_2:57114264-57114283 None:intergenic 25.0%
! CTAAGAAAGTTCCTTAAAAA+GGG + chr3_2:57114318-57114337 Msa0413000:intron 25.0%
!! ACTTTTCTTATTCTTCTTGA+TGG + chr3_2:57114380-57114399 Msa0413000:intron 25.0%
! TTAGATTAAGAACACAACAA+TGG - chr3_2:57114636-57114655 None:intergenic 25.0%
! CTAACAATATTAAATGCAGT+TGG + chr3_2:57114652-57114671 Msa0413000:intron 25.0%
! AAGACAATAGAAACAATTCT+GGG - chr3_2:57114729-57114748 None:intergenic 25.0%
!!! CATTCTGAAATTCATAACAA+TGG - chr3_2:57115185-57115204 None:intergenic 25.0%
! CATTGTTATGAATTTCAGAA+TGG + chr3_2:57115183-57115202 Msa0413000:CDS 25.0%
! GAATTATTCATTATTAAGCC+AGG + chr3_2:57116127-57116146 Msa0413000:CDS 25.0%
AATAATTCAAGGCGTATGTT+TGG - chr3_2:57111613-57111632 None:intergenic 30.0%
ATGTATGTTTGAATATGCTG+TGG + chr3_2:57111697-57111716 Msa0413000:intron 30.0%
TGTATGTTTGAATATGCTGT+GGG + chr3_2:57111698-57111717 Msa0413000:intron 30.0%
TAGTTGCAAATCATAACTCA+AGG - chr3_2:57111849-57111868 None:intergenic 30.0%
TGTGTTTATTTCCAAAAGAG+TGG - chr3_2:57111932-57111951 None:intergenic 30.0%
GTCCATTCAAAAAAAGAGAA+TGG - chr3_2:57111961-57111980 None:intergenic 30.0%
TTAAGTAACTACTCACAAGT+TGG - chr3_2:57112068-57112087 None:intergenic 30.0%
GTGAGTAGTTACTTAAAAAG+TGG + chr3_2:57112072-57112091 Msa0413000:intron 30.0%
! AGTATCTGACAAACTGATTT+AGG - chr3_2:57112158-57112177 None:intergenic 30.0%
! ATATGTTTTCTCTTTCACTC+TGG + chr3_2:57112249-57112268 Msa0413000:intron 30.0%
AAACAGAAAGGAATCAGATA+GGG - chr3_2:57112530-57112549 None:intergenic 30.0%
TAAACAGAAAGGAATCAGAT+AGG - chr3_2:57112531-57112550 None:intergenic 30.0%
! TTTGCCAAACTAGTTTGATT+AGG + chr3_2:57112666-57112685 Msa0413000:intron 30.0%
! TTGCCAAACTAGTTTGATTA+GGG + chr3_2:57112667-57112686 Msa0413000:intron 30.0%
TTTCCCTAATCAAACTAGTT+TGG - chr3_2:57112673-57112692 None:intergenic 30.0%
TAAGGAATCATACAGTAAAG+GGG - chr3_2:57112905-57112924 None:intergenic 30.0%
GTAAGGAATCATACAGTAAA+GGG - chr3_2:57112906-57112925 None:intergenic 30.0%
TTTGAATTGGAAAGATCAGA+AGG - chr3_2:57112972-57112991 None:intergenic 30.0%
! TTTTATTGAGTTCATAACCG+CGG - chr3_2:57113172-57113191 None:intergenic 30.0%
! GTGTCGATAATACAAAAGTT+AGG + chr3_2:57113530-57113549 Msa0413000:intron 30.0%
!! AACAACTTGTTACTACTACA+AGG + chr3_2:57113579-57113598 Msa0413000:intron 30.0%
CTGTATATATATCTCGTATC+AGG - chr3_2:57113791-57113810 None:intergenic 30.0%
AATCAAAGTTACTCTACATG+AGG - chr3_2:57113921-57113940 None:intergenic 30.0%
TTTCATAGAGTTAGTTGAGT+TGG - chr3_2:57113957-57113976 None:intergenic 30.0%
TCAACTAACTCTATGAAATC+TGG + chr3_2:57113959-57113978 Msa0413000:intron 30.0%
!!! TTTGTTGTTTTACGGTTTTG+AGG - chr3_2:57114082-57114101 None:intergenic 30.0%
!!! CAGTGTCTTTTGTTGTTTTA+CGG - chr3_2:57114090-57114109 None:intergenic 30.0%
AAACTTGGAAAACAATGCAA+AGG - chr3_2:57114132-57114151 None:intergenic 30.0%
GCTAAGAAAGTTCCTTAAAA+AGG + chr3_2:57114317-57114336 Msa0413000:intron 30.0%
! CTTGATGGTTAATTGAGTTT+CGG + chr3_2:57114395-57114414 Msa0413000:intron 30.0%
! GAGATTACAATGTGTTTTCT+TGG + chr3_2:57114448-57114467 Msa0413000:intron 30.0%
CAAGACAATAGAAACAATTC+TGG - chr3_2:57114730-57114749 None:intergenic 30.0%
!! GTCTTGCTATTTATGTACTA+AGG + chr3_2:57114744-57114763 Msa0413000:intron 30.0%
! AATATTTGTTGCCAATTTCC+TGG + chr3_2:57114854-57114873 Msa0413000:intron 30.0%
TTACAAAATCATCAATCACC+AGG - chr3_2:57114875-57114894 None:intergenic 30.0%
GAAGTATGAAGAAAGACTAT+CGG + chr3_2:57114974-57114993 Msa0413000:CDS 30.0%
TATACCTCATTCTTTATGTC+AGG - chr3_2:57115015-57115034 None:intergenic 30.0%
GATACATGTCAATATTCACA+TGG + chr3_2:57115222-57115241 Msa0413000:CDS 30.0%
TTTGAATTTGATGTAGGTGA+AGG - chr3_2:57115390-57115409 None:intergenic 30.0%
GGTGAATTTGAATTTGATGT+AGG - chr3_2:57115396-57115415 None:intergenic 30.0%
GAAGATTGTATCAAAGAAGA+CGG - chr3_2:57115456-57115475 None:intergenic 30.0%
CTATTTGACTCTTCTATCAT+TGG - chr3_2:57115669-57115688 None:intergenic 30.0%
CAATGATAGAAGAGTCAAAT+AGG + chr3_2:57115667-57115686 Msa0413000:CDS 30.0%
AAAATGTCTTCATGGTTAGT+AGG - chr3_2:57115708-57115727 None:intergenic 30.0%
! ACTAACCATGAAGACATTTT+CGG + chr3_2:57115708-57115727 Msa0413000:CDS 30.0%
TCATCGATACAATCTTCAAA+AGG + chr3_2:57115732-57115751 Msa0413000:CDS 30.0%
TGATCCAATCACATTTGAAT+CGG - chr3_2:57115814-57115833 None:intergenic 30.0%
ATTTCATTGAGTTTATCACC+GGG - chr3_2:57116029-57116048 None:intergenic 30.0%
CATTTCATTGAGTTTATCAC+CGG - chr3_2:57116030-57116049 None:intergenic 30.0%
ATGACGACATCTTATTCATT+CGG + chr3_2:57116047-57116066 Msa0413000:CDS 30.0%
TACTAGCAATGTTTCAACAA+TGG + chr3_2:57116082-57116101 Msa0413000:CDS 30.0%
ATTATTAAGCCAGGAATCTT+GGG + chr3_2:57116136-57116155 Msa0413000:CDS 30.0%
TCAACTTCAATGCCATAATC+CGG + chr3_2:57111321-57111340 Msa0413000:CDS 35.0%
TATAACTGCTTCAGCTAAGA+TGG - chr3_2:57111355-57111374 None:intergenic 35.0%
CATAACTCAAGGCATATGTT+TGG - chr3_2:57111838-57111857 None:intergenic 35.0%
! GTATCAAACTACCACTCTTT+TGG + chr3_2:57111918-57111937 Msa0413000:intron 35.0%
!!! GACGCTAGTTTACTGATTTT+GGG + chr3_2:57111978-57111997 Msa0413000:intron 35.0%
AATCAGTTTGTCAGATACTG+AGG + chr3_2:57112159-57112178 Msa0413000:intron 35.0%
!!! TACAGCTTGTTTTTGCTGTT+TGG + chr3_2:57112278-57112297 Msa0413000:intron 35.0%
AATCAGATAGGGAAATGGAA+AGG - chr3_2:57112519-57112538 None:intergenic 35.0%
AAAGGAATCAGATAGGGAAA+TGG - chr3_2:57112524-57112543 None:intergenic 35.0%
TTCAGCCAAAGGTTATACTA+TGG + chr3_2:57112745-57112764 Msa0413000:intron 35.0%
TTCGACCATAGTATAACCTT+TGG - chr3_2:57112753-57112772 None:intergenic 35.0%
AGCAAAAAAGCAAACTCTTC+TGG + chr3_2:57112789-57112808 Msa0413000:intron 35.0%
ATCCTGGTCAATATAGAACA+AGG - chr3_2:57112840-57112859 None:intergenic 35.0%
GATGCTTGTGAATATGTACA+CGG - chr3_2:57112883-57112902 None:intergenic 35.0%
CGTAAGGAATCATACAGTAA+AGG - chr3_2:57112907-57112926 None:intergenic 35.0%
TATGATTCCTTACGAAACTC+AGG + chr3_2:57112913-57112932 Msa0413000:intron 35.0%
CTTTCCAATTCAAATGTGAG+TGG + chr3_2:57112978-57112997 Msa0413000:CDS 35.0%
TGATCCACTCACATTTGAAT+TGG - chr3_2:57112985-57113004 None:intergenic 35.0%
TATTGCTCTCAATAAAGCTC+TGG - chr3_2:57113043-57113062 None:intergenic 35.0%
!! AGCTTTATTGAGAGCAATAG+CGG + chr3_2:57113044-57113063 Msa0413000:CDS 35.0%
! ACCAGTCTAATTTTCCATCA+GGG - chr3_2:57113145-57113164 None:intergenic 35.0%
ATCCAGATGTTGAAGATCAA+CGG + chr3_2:57113261-57113280 Msa0413000:intron 35.0%
TTTGCCAGAGAAATTGTACA+TGG + chr3_2:57113313-57113332 Msa0413000:CDS 35.0%
AAACAATGCAAAGGAAGAAG+TGG - chr3_2:57114123-57114142 None:intergenic 35.0%
TTGGTGAAGGTTTAGAAACT+TGG - chr3_2:57114147-57114166 None:intergenic 35.0%
TCTAAACCTTCACCAAGTTT+CGG + chr3_2:57114151-57114170 Msa0413000:intron 35.0%
! GAGATTGCAATGTGTTTTCT+TGG + chr3_2:57114292-57114311 Msa0413000:intron 35.0%
! TTCAGAACACACCCTTTTTA+AGG - chr3_2:57114332-57114351 None:intergenic 35.0%
!!! CTCTCAAGAAACACTTTTTC+AGG - chr3_2:57114488-57114507 None:intergenic 35.0%
CTCTCTATAAGACAGAAAGA+AGG + chr3_2:57114548-57114567 Msa0413000:intron 35.0%
ACGCTTTGTCATATCAATGT+TGG + chr3_2:57114594-57114613 Msa0413000:intron 35.0%
ATCATCAATCACCAGGAAAT+TGG - chr3_2:57114868-57114887 None:intergenic 35.0%
TAGTCTTTCTTCATACTTCG+AGG - chr3_2:57114973-57114992 None:intergenic 35.0%
CTCATTCTTTATGTCAGGTA+GGG - chr3_2:57115010-57115029 None:intergenic 35.0%
TCAAAGTGAAACTTTGCTCA+TGG + chr3_2:57115064-57115083 Msa0413000:CDS 35.0%
CAAAGTGAAACTTTGCTCAT+GGG + chr3_2:57115065-57115084 Msa0413000:CDS 35.0%
! TTCACCTAGTGTTTCTACAA+TGG + chr3_2:57115410-57115429 Msa0413000:CDS 35.0%
GAATCCATTGTAGAAACACT+AGG - chr3_2:57115417-57115436 None:intergenic 35.0%
ACTGTAGTATGAATCTGAGT+CGG - chr3_2:57115543-57115562 None:intergenic 35.0%
! CTAACCATGAAGACATTTTC+GGG + chr3_2:57115709-57115728 Msa0413000:CDS 35.0%
ACAATCTTCAAAAGGAATGC+TGG + chr3_2:57115740-57115759 Msa0413000:CDS 35.0%
CAATCACATTTGAATCGGAA+AGG - chr3_2:57115809-57115828 None:intergenic 35.0%
CTTTCCGATTCAAATGTGAT+TGG + chr3_2:57115807-57115826 Msa0413000:CDS 35.0%
TTTCATTGAGTTTATCACCG+GGG - chr3_2:57116028-57116047 None:intergenic 35.0%
AAACATTGCTAGTATCGTCT+AGG - chr3_2:57116076-57116095 None:intergenic 35.0%
CATTATTAAGCCAGGAATCT+TGG + chr3_2:57116135-57116154 Msa0413000:CDS 35.0%
TGTTGATCAGATTCCAATGT+TGG - chr3_2:57116188-57116207 None:intergenic 35.0%
ATGTTTGAATATGCTGTGGG+AGG + chr3_2:57111701-57111720 Msa0413000:intron 40.0%
! GTGATATTTCGCTGCGATTT+TGG - chr3_2:57111729-57111748 None:intergenic 40.0%
AAGCTGCAAATAGTAGCTTC+TGG + chr3_2:57111759-57111778 Msa0413000:intron 40.0%
!!! GGACGCTAGTTTACTGATTT+TGG + chr3_2:57111977-57111996 Msa0413000:intron 40.0%
! TTGCTTGAGTTTTCAGCCAA+AGG + chr3_2:57112734-57112753 Msa0413000:intron 40.0%
!! AGCCTTGTTCTATATTGACC+AGG + chr3_2:57112835-57112854 Msa0413000:intron 40.0%
!!! TACACGGTATTTTCGAGTTC+TGG - chr3_2:57112867-57112886 None:intergenic 40.0%
GGACACAAATCAGCAACTTT+GGG + chr3_2:57112941-57112960 Msa0413000:CDS 40.0%
GACACAAATCAGCAACTTTG+GGG + chr3_2:57112942-57112961 Msa0413000:CDS 40.0%
TGAGTGGATCACAACAATTC+AGG + chr3_2:57112994-57113013 Msa0413000:CDS 40.0%
GAGTGGATCACAACAATTCA+GGG + chr3_2:57112995-57113014 Msa0413000:CDS 40.0%
! GCTTTATTGAGAGCAATAGC+GGG + chr3_2:57113045-57113064 Msa0413000:CDS 40.0%
CTTTATTGAGAGCAATAGCG+GGG + chr3_2:57113046-57113065 Msa0413000:CDS 40.0%
AGCCTTCTACTTTCTCTGAT+TGG + chr3_2:57113114-57113133 Msa0413000:CDS 40.0%
GCCTTCTACTTTCTCTGATT+GGG + chr3_2:57113115-57113134 Msa0413000:CDS 40.0%
CCTTCTACTTTCTCTGATTG+GGG + chr3_2:57113116-57113135 Msa0413000:CDS 40.0%
! CCAGTCTAATTTTCCATCAG+GGG - chr3_2:57113144-57113163 None:intergenic 40.0%
! GACCAGTCTAATTTTCCATC+AGG - chr3_2:57113146-57113165 None:intergenic 40.0%
TCAACGGCAATGCTATAATC+CGG + chr3_2:57113277-57113296 Msa0413000:CDS 40.0%
TGCTCCATGTACAATTTCTC+TGG - chr3_2:57113320-57113339 None:intergenic 40.0%
GAGAAGCAGAAACAACATGT+AGG + chr3_2:57114943-57114962 Msa0413000:CDS 40.0%
AAGCAGAAACAACATGTAGG+TGG + chr3_2:57114946-57114965 Msa0413000:CDS 40.0%
CCTCATTCTTTATGTCAGGT+AGG - chr3_2:57115011-57115030 None:intergenic 40.0%
CCTACCTGACATAAAGAATG+AGG + chr3_2:57115008-57115027 Msa0413000:CDS 40.0%
AATGTCCCTTTGCTCATTCT+GGG + chr3_2:57115112-57115131 Msa0413000:CDS 40.0%
ATTTCCCCAGAATGAGCAAA+GGG - chr3_2:57115120-57115139 None:intergenic 40.0%
AATTTCCCCAGAATGAGCAA+AGG - chr3_2:57115121-57115140 None:intergenic 40.0%
AGAATGGATCATGCAGTAGA+GGG + chr3_2:57115199-57115218 Msa0413000:CDS 40.0%
ATCCTGCTCAATACAGAACA+AGG + chr3_2:57115265-57115284 Msa0413000:CDS 40.0%
AACCTTGTTCTGTATTGAGC+AGG - chr3_2:57115270-57115289 None:intergenic 40.0%
AACTGGTATAAGCCTTCAAC+AGG - chr3_2:57115359-57115378 None:intergenic 40.0%
! GCAGTTTTCAATCTGTTGCT+CGG - chr3_2:57115582-57115601 None:intergenic 40.0%
ATGACCCGAAAATGTCTTCA+TGG - chr3_2:57115716-57115735 None:intergenic 40.0%
AATGTGAACCAAGAACTGTG+TGG + chr3_2:57115771-57115790 Msa0413000:CDS 40.0%
CACATTTGAATCGGAAAGGT+CGG - chr3_2:57115805-57115824 None:intergenic 40.0%
! AATGGATCAACCTTGAGTTG+TGG - chr3_2:57115837-57115856 None:intergenic 40.0%
! GATATGATGCCATTTCGAAG+TGG + chr3_2:57115868-57115887 Msa0413000:CDS 40.0%
! AGAAGGCTCTAATTCAACTG+AGG - chr3_2:57115955-57115974 None:intergenic 40.0%
TTGGTACTCCACTGATAGAA+AGG + chr3_2:57115989-57116008 Msa0413000:CDS 40.0%
CCAATCTACCTTTCTATCAG+TGG - chr3_2:57116000-57116019 None:intergenic 40.0%
CCACTGATAGAAAGGTAGAT+TGG + chr3_2:57115997-57116016 Msa0413000:CDS 40.0%
GAAGGATGATGATCCAACAT+TGG + chr3_2:57116172-57116191 Msa0413000:CDS 40.0%
TCAACTGCAATGCCATAATC+CGG + chr3_2:57116226-57116245 Msa0413000:CDS 40.0%
ATGAAACATCGTCCGGATTA+TGG - chr3_2:57116241-57116260 None:intergenic 40.0%
ATGGAACATCGTCCGGATTA+TGG - chr3_2:57111336-57111355 None:intergenic 45.0%
AGCTAAGATGGAACATCGTC+CGG - chr3_2:57111343-57111362 None:intergenic 45.0%
GGGTGACACTGCAGAAAATA+TGG + chr3_2:57111428-57111447 Msa0413000:intron 45.0%
ATGACAACTCGCCCTTCATT+TGG + chr3_2:57111574-57111593 Msa0413000:intron 45.0%
GTCATGTGCAACGATACGAA+TGG + chr3_2:57112638-57112657 Msa0413000:intron 45.0%
ATACTATGGTCGAAGCTCCT+CGG + chr3_2:57112759-57112778 Msa0413000:intron 45.0%
!!! CTTTTTTGCTCACAAACCCG+AGG - chr3_2:57112779-57112798 None:intergenic 45.0%
GCAAACTCTTCTGGTGCAAT+AGG + chr3_2:57112798-57112817 Msa0413000:intron 45.0%
TCCTTACGAAACTCAGGACA+AGG + chr3_2:57112919-57112938 Msa0413000:intron 45.0%
CCTTACGAAACTCAGGACAA+GGG + chr3_2:57112920-57112939 Msa0413000:intron 45.0%
GGGACACAAATCAGCAACTT+TGG + chr3_2:57112940-57112959 Msa0413000:CDS 45.0%
!!! GGGTTGATGCCTTTTCGAAA+CGG + chr3_2:57113015-57113034 Msa0413000:CDS 45.0%
ATGGCAACTAAGGTAGCAGA+TGG - chr3_2:57113092-57113111 None:intergenic 45.0%
ATCTGCTACCTTAGTTGCCA+TGG + chr3_2:57113091-57113110 Msa0413000:CDS 45.0%
AGAGAAAGTAGAAGGCTCCA+TGG - chr3_2:57113111-57113130 None:intergenic 45.0%
CCCCAATCAGAGAAAGTAGA+AGG - chr3_2:57113119-57113138 None:intergenic 45.0%
CCCCTGATGGAAAATTAGAC+TGG + chr3_2:57113141-57113160 Msa0413000:CDS 45.0%
! AAATTAGACTGGTCCATCCG+CGG + chr3_2:57113152-57113171 Msa0413000:CDS 45.0%
ATTGAGTTCATAACCGCGGA+TGG - chr3_2:57113168-57113187 None:intergenic 45.0%
TGCCGTTGATCTTCAACATC+TGG - chr3_2:57113266-57113285 None:intergenic 45.0%
GTACATGGAGCATAAGCAGA+AGG + chr3_2:57113328-57113347 Msa0413000:CDS 45.0%
AAGGAAACTGCACCGAAACT+TGG - chr3_2:57114166-57114185 None:intergenic 45.0%
ACAGAACCAAGATTGCCTCA+AGG + chr3_2:57114903-57114922 Msa0413000:intron 45.0%
CAGAACCAAGATTGCCTCAA+GGG + chr3_2:57114904-57114923 Msa0413000:intron 45.0%
TTTCGAAACCTTCTCCCTTG+AGG - chr3_2:57114921-57114940 None:intergenic 45.0%
CAAGGGAGAAGGTTTCGAAA+TGG + chr3_2:57114921-57114940 Msa0413000:CDS 45.0%
GAATGTCCCTTTGCTCATTC+TGG + chr3_2:57115111-57115130 Msa0413000:CDS 45.0%
ATGTCCCTTTGCTCATTCTG+GGG + chr3_2:57115113-57115132 Msa0413000:CDS 45.0%
! CTCATTCTGGGGAAATTGCA+AGG + chr3_2:57115124-57115143 Msa0413000:CDS 45.0%
CAGAATGGATCATGCAGTAG+AGG + chr3_2:57115198-57115217 Msa0413000:CDS 45.0%
GAATGGATCATGCAGTAGAG+GGG + chr3_2:57115200-57115219 Msa0413000:CDS 45.0%
GTATTGAGCAGGATGAAGCA+AGG - chr3_2:57115259-57115278 None:intergenic 45.0%
AGGTGAAGGAAAAGCAGAAC+TGG - chr3_2:57115376-57115395 None:intergenic 45.0%
GAAGAGTCAAATAGGCTTGC+AGG + chr3_2:57115675-57115694 Msa0413000:CDS 45.0%
TAGAGTAGCCACACAGTTCT+TGG - chr3_2:57115782-57115801 None:intergenic 45.0%
GATTGGATCACCACAACTCA+AGG + chr3_2:57115824-57115843 Msa0413000:CDS 45.0%
TGCTTCGCTTGATAAAGCTC+TGG - chr3_2:57115896-57115915 None:intergenic 45.0%
AATTCAACTGAGGTGGCAGA+AGG - chr3_2:57115945-57115964 None:intergenic 45.0%
! AGGCTCTAATTCAACTGAGG+TGG - chr3_2:57115952-57115971 None:intergenic 45.0%
CAATCAGAGAAGGCAGTAGA+AGG - chr3_2:57115972-57115991 None:intergenic 45.0%
CTTCTACTGCCTTCTCTGAT+TGG + chr3_2:57115970-57115989 Msa0413000:CDS 45.0%
! AGTGGAGTACCAATCAGAGA+AGG - chr3_2:57115982-57116001 None:intergenic 45.0%
!! AAGGTAGATTGGTCTATCCC+CGG + chr3_2:57116008-57116027 Msa0413000:CDS 45.0%
!! TTGGGTTAGCTCACTTGTGA+AGG + chr3_2:57116154-57116173 Msa0413000:CDS 45.0%
TACTATGGTCGAAGCTCCTC+GGG + chr3_2:57112760-57112779 Msa0413000:intron 50.0%
!! TTCGAGTTCTGGCTTCATCC+TGG - chr3_2:57112856-57112875 None:intergenic 50.0%
CCCTTGTCCTGAGTTTCGTA+AGG - chr3_2:57112923-57112942 None:intergenic 50.0%
AGAAGGCTCCATGGCAACTA+AGG - chr3_2:57113102-57113121 None:intergenic 50.0%
GCAATGCTATAATCCGGACG+CGG + chr3_2:57113283-57113302 Msa0413000:CDS 50.0%
CATGGAGCATAAGCAGAAGG+TGG + chr3_2:57113331-57113350 Msa0413000:CDS 50.0%
TGGATCCTCTGTGCATCTCT+AGG + chr3_2:57113380-57113399 Msa0413000:intron 50.0%
! ACTAGCCTAGAGATGCACAG+AGG - chr3_2:57113388-57113407 None:intergenic 50.0%
! ACTGCACCGAAACTTGGTGA+AGG - chr3_2:57114160-57114179 None:intergenic 50.0%
CTTCTCCCTTGAGGCAATCT+TGG - chr3_2:57114912-57114931 None:intergenic 50.0%
CAAGATTGCCTCAAGGGAGA+AGG + chr3_2:57114910-57114929 Msa0413000:CDS 50.0%
GGGATAATGCTCCTCATGAG+TGG + chr3_2:57115085-57115104 Msa0413000:CDS 50.0%
GGACATTCTGTCCACTCATG+AGG - chr3_2:57115099-57115118 None:intergenic 50.0%
CTTCTTTGCTCACAAACCCG+AGG + chr3_2:57115326-57115345 Msa0413000:CDS 50.0%
AATCTTCGTCGACACTGCCT+TGG + chr3_2:57115469-57115488 Msa0413000:CDS 50.0%
GCAGGAGATGATGTTGCAGA+CGG - chr3_2:57115498-57115517 None:intergenic 50.0%
TCTGCAACATCATCTCCTGC+AGG + chr3_2:57115498-57115517 Msa0413000:CDS 50.0%
! TGCTCGGCATCTGAAGTGTA+GGG - chr3_2:57115566-57115585 None:intergenic 50.0%
! TTGCTCGGCATCTGAAGTGT+AGG - chr3_2:57115567-57115586 None:intergenic 50.0%
CTTTATCAAGCGAAGCAGCG+TGG + chr3_2:57115899-57115918 Msa0413000:CDS 50.0%
GTGAGCTAACCCAAGATTCC+TGG - chr3_2:57116148-57116167 None:intergenic 50.0%
TGCTGCAGTCGCACAACTGA+AGG - chr3_2:57111802-57111821 None:intergenic 55.0%
! GCTCTGGCTCCGTTTCGAAA+AGG - chr3_2:57113027-57113046 None:intergenic 55.0%
CAGTGACTAGTGCAGCAGCT+TGG + chr3_2:57114039-57114058 Msa0413000:intron 55.0%
TGACTAGTGCAGCAGCTTGG+TGG + chr3_2:57114042-57114061 Msa0413000:intron 55.0%
GACTAGTGCAGCAGCTTGGT+GGG + chr3_2:57114043-57114062 Msa0413000:intron 55.0%
TTCAACAGGCGAAGCTCCTC+GGG - chr3_2:57115345-57115364 None:intergenic 55.0%
CTTCAACAGGCGAAGCTCCT+CGG - chr3_2:57115346-57115365 None:intergenic 55.0%
GATGTTGCAGACGGAGTCCA+AGG - chr3_2:57115489-57115508 None:intergenic 55.0%
GCAACATCATCTCCTGCAGG+AGG + chr3_2:57115501-57115520 Msa0413000:CDS 55.0%
! GCTCTGGCTCCACTTCGAAA+TGG - chr3_2:57115880-57115899 None:intergenic 55.0%
TCTGATTGGGGCTCCCCTGA+TGG + chr3_2:57113128-57113147 Msa0413000:CDS 60.0%
GGCAAAGACGAAACCGCGTC+CGG - chr3_2:57113299-57113318 None:intergenic 60.0%
CGAGGAGCTTCGCCTGTTGA+AGG + chr3_2:57115344-57115363 Msa0413000:CDS 60.0%
CTCCTGCAGGAGGAACCATG+TGG + chr3_2:57115511-57115530 Msa0413000:CDS 60.0%
TGCCACATGGTTCCTCCTGC+AGG - chr3_2:57115516-57115535 None:intergenic 60.0%
CTGAGTCGGAGTCTGCCACA+TGG - chr3_2:57115529-57115548 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 57111302 57116265 57111302 ID=Msa0413000;Name=Msa0413000
chr3_2 mRNA 57111302 57116265 57111302 ID=Msa0413000-mRNA-1;Parent=Msa0413000;Name=Msa0413000-mRNA-1;_AED=0.34;_eAED=0.36;_QI=0|0|0|1|0|0|5|0|578
chr3_2 exon 57111302 57111348 57111302 ID=Msa0413000-mRNA-1:exon:11663;Parent=Msa0413000-mRNA-1
chr3_2 exon 57112750 57112755 57112750 ID=Msa0413000-mRNA-1:exon:11664;Parent=Msa0413000-mRNA-1
chr3_2 exon 57112935 57113173 57112935 ID=Msa0413000-mRNA-1:exon:11665;Parent=Msa0413000-mRNA-1
chr3_2 exon 57113267 57113352 57113267 ID=Msa0413000-mRNA-1:exon:11666;Parent=Msa0413000-mRNA-1
chr3_2 exon 57114907 57116265 57114907 ID=Msa0413000-mRNA-1:exon:11667;Parent=Msa0413000-mRNA-1
chr3_2 CDS 57111302 57111348 57111302 ID=Msa0413000-mRNA-1:cds;Parent=Msa0413000-mRNA-1
chr3_2 CDS 57112750 57112755 57112750 ID=Msa0413000-mRNA-1:cds;Parent=Msa0413000-mRNA-1
chr3_2 CDS 57112935 57113173 57112935 ID=Msa0413000-mRNA-1:cds;Parent=Msa0413000-mRNA-1
chr3_2 CDS 57113267 57113352 57113267 ID=Msa0413000-mRNA-1:cds;Parent=Msa0413000-mRNA-1
chr3_2 CDS 57114907 57116265 57114907 ID=Msa0413000-mRNA-1:cds;Parent=Msa0413000-mRNA-1
Gene Sequence

>Msa0413000

ATGGTGTTGAAGTTGAAGATCAACTTCAATGCCATAATCCGGACGATCCAAAGGACAAGGGACACAAATCAGCAACTTTGGGGCTATCCTTCTGATCTTTCCAATTCAAATGTGAGTGGATCACAACAATTCAGGGTTGATGCCTTTTCGAAACGGAGCCAGAGCTTTATTGAGAGCAATAGCGGGGTGAGCTTCAATTCTTTGCTTCCATCTGCTACCTTAGTTGCCATGGAGCCTTCTACTTTCTCTGATTGGGGCTCCCCTGATGGAAAATTAGACTGGTCCATCCGCGATGTTGAAGATCAACGGCAATGCTATAATCCGGACGCGGTTTCGTCTTTGCCAGAGAAATTGTACATGGAGCATAAGCAGAAGGTGAACCAAGATTGCCTCAAGGGAGAAGGTTTCGAAATGGAGAAGCAGAAACAACATGTAGGTGGACCTCGAAGTATGAAGAAAGACTATCGGATCGATCGATCCCTACCTGACATAAAGAATGAGGTATATAATACAGATGAATTTAGGATGTATAAATTCAAAGTGAAACTTTGCTCATGGGATAATGCTCCTCATGAGTGGACAGAATGTCCCTTTGCTCATTCTGGGGAAATTGCAAGGCGCCGTGATCCAAAGAAATATTATTACAGTTGTGTCCATTGTTATGAATTTCAGAATGGATCATGCAGTAGAGGGGATACATGTCAATATTCACATGGTGTTTTTGAGTCCTTGCTTCATCCTGCTCAATACAGAACAAGGTTTTGCAAGTATGAAACTGAATGCACAAGAAAAGTTTGCTTCTTTGCTCACAAACCCGAGGAGCTTCGCCTGTTGAAGGCTTATACCAGTTCTGCTTTTCCTTCACCTACATCAAATTCAAATTCACCTAGTGTTTCTACAATGGATTCTTTCACATTGATCTCTCCGTCTTCTTTGATACAATCTTCGTCGACACTGCCTTGGACTCCGTCTGCAACATCATCTCCTGCAGGAGGAACCATGTGGCAGACTCCGACTCAGATTCATACTACAGTCCCTACACTTCAGATGCCGAGCAACAGATTGAAAACTGCATTGAATGCTAGAGATAATACTGATCTAGACATGAAATTTCTCGAAAATCAGCACATGCTGAAGCCAATGATAGAAGAGTCAAATAGGCTTGCAGGAGTGAATCCTACTAACCATGAAGACATTTTCGGGTCATCGATACAATCTTCAAAAGGAATGCTGGTGCATCAGAATGTGAACCAAGAACTGTGTGGCTACTCTACCGACCTTTCCGATTCAAATGTGATTGGATCACCACAACTCAAGGTTGATCCATTTATGAATTCAAGATATGATGCCATTTCGAAGTGGAGCCAGAGCTTTATCAAGCGAAGCAGCGTGGAAAACTTTAGTTACAAGCTTCCTTCTGCCACCTCAGTTGAATTAGAGCCTTCTACTGCCTTCTCTGATTGGTACTCCACTGATAGAAAGGTAGATTGGTCTATCCCCGGTGATAAACTCAATGAAATGACGACATCTTATTCATTCGGCTTCCTAGACGATACTAGCAATGTTTCAACAATGGCTGCTTCATCAAATGTTGATGAGAATTATTCATTATTAAGCCAGGAATCTTGGGTTAGCTCACTTGTGAAGGATGATGATCCAACATTGGAATCTGATCAACATTGTGTTGAAATTGAATATCAACTGCAATGCCATAATCCGGACGATGTTTCATCTTAG
Protein sequence

>Msa0413000

MVLKLKINFNAIIRTIQRTRDTNQQLWGYPSDLSNSNVSGSQQFRVDAFSKRSQSFIESNSGVSFNSLLPSATLVAMEPSTFSDWGSPDGKLDWSIRDVEDQRQCYNPDAVSSLPEKLYMEHKQKVNQDCLKGEGFEMEKQKQHVGGPRSMKKDYRIDRSLPDIKNEVYNTDEFRMYKFKVKLCSWDNAPHEWTECPFAHSGEIARRRDPKKYYYSCVHCYEFQNGSCSRGDTCQYSHGVFESLLHPAQYRTRFCKYETECTRKVCFFAHKPEELRLLKAYTSSAFPSPTSNSNSPSVSTMDSFTLISPSSLIQSSSTLPWTPSATSSPAGGTMWQTPTQIHTTVPTLQMPSNRLKTALNARDNTDLDMKFLENQHMLKPMIEESNRLAGVNPTNHEDIFGSSIQSSKGMLVHQNVNQELCGYSTDLSDSNVIGSPQLKVDPFMNSRYDAISKWSQSFIKRSSVENFSYKLPSATSVELEPSTAFSDWYSTDRKVDWSIPGDKLNEMTTSYSFGFLDDTSNVSTMAASSNVDENYSLLSQESWVSSLVKDDDPTLESDQHCVEIEYQLQCHNPDDVSS*