Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413770 | XP_013458769.1 | 93.013 | 229 | 15 | 1 | 1 | 228 | 1 | 229 | 2.21e-153 | 435 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413770 | sp|Q9SZL8|FRS5_ARATH | 52.336 | 107 | 49 | 1 | 48 | 152 | 72 | 178 | 1.36e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413770 | A0A072UTY6 | 93.013 | 229 | 15 | 1 | 1 | 228 | 1 | 229 | 1.06e-153 | 435 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0413770 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413770 | MtrunA17_Chr3g0078041 | 93.013 | 229 | 15 | 1 | 1 | 228 | 1 | 229 | 2.03e-157 | 435 |
| Msa0413770 | MtrunA17_Chr7g0233911 | 47.727 | 220 | 99 | 4 | 1 | 220 | 1 | 204 | 8.48e-64 | 197 |
| Msa0413770 | MtrunA17_Chr2g0329421 | 40.761 | 184 | 100 | 3 | 45 | 223 | 23 | 202 | 1.45e-38 | 132 |
| Msa0413770 | MtrunA17_Chr4g0033611 | 42.697 | 178 | 90 | 4 | 45 | 215 | 72 | 244 | 7.56e-38 | 132 |
| Msa0413770 | MtrunA17_Chr2g0329361 | 36.269 | 193 | 103 | 5 | 43 | 219 | 55 | 243 | 4.73e-34 | 122 |
| Msa0413770 | MtrunA17_Chr5g0448761 | 52.778 | 108 | 48 | 2 | 48 | 152 | 59 | 166 | 5.85e-24 | 99.8 |
| Msa0413770 | MtrunA17_Chr2g0287061 | 39.423 | 104 | 49 | 1 | 48 | 151 | 28 | 117 | 6.84e-18 | 82.0 |
| Msa0413770 | MtrunA17_Chr2g0287061 | 35.659 | 129 | 69 | 2 | 48 | 176 | 182 | 296 | 6.49e-17 | 79.3 |
| Msa0413770 | MtrunA17_Chr5g0440451 | 41.667 | 120 | 53 | 3 | 37 | 153 | 28 | 133 | 3.20e-17 | 80.1 |
| Msa0413770 | MtrunA17_Chr1g0202341 | 33.523 | 176 | 106 | 6 | 12 | 182 | 15 | 184 | 4.15e-16 | 77.0 |
| Msa0413770 | MtrunA17_Chr2g0329031 | 35.652 | 115 | 68 | 2 | 44 | 158 | 9 | 117 | 5.52e-16 | 76.6 |
| Msa0413770 | MtrunA17_Chr1g0207551 | 36.190 | 105 | 64 | 2 | 48 | 152 | 33 | 134 | 5.76e-16 | 76.6 |
| Msa0413770 | MtrunA17_Chr3g0080351 | 34.127 | 126 | 71 | 1 | 48 | 161 | 75 | 200 | 8.73e-16 | 75.9 |
| Msa0413770 | MtrunA17_Chr3g0082121 | 36.585 | 123 | 71 | 3 | 49 | 165 | 43 | 164 | 3.87e-14 | 71.2 |
| Msa0413770 | MtrunA17_Chr6g0458391 | 37.963 | 108 | 66 | 1 | 49 | 156 | 225 | 331 | 4.96e-14 | 70.9 |
| Msa0413770 | MtrunA17_Chr6g0458391 | 33.594 | 128 | 83 | 2 | 49 | 176 | 91 | 216 | 5.64e-12 | 64.7 |
| Msa0413770 | MtrunA17_Chr5g0401121 | 38.095 | 105 | 63 | 2 | 49 | 152 | 56 | 159 | 4.12e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0413770 | AT2G43280.1 | 72.131 | 183 | 50 | 1 | 43 | 225 | 17 | 198 | 4.77e-98 | 284 |
| Msa0413770 | AT2G43280.2 | 73.006 | 163 | 44 | 0 | 63 | 225 | 1 | 163 | 3.25e-90 | 263 |
| Msa0413770 | AT3G07500.1 | 49.721 | 179 | 83 | 3 | 48 | 220 | 32 | 209 | 4.50e-51 | 165 |
| Msa0413770 | AT4G12850.1 | 41.989 | 181 | 93 | 2 | 43 | 219 | 5 | 177 | 2.51e-44 | 147 |
| Msa0413770 | AT3G59470.3 | 46.629 | 178 | 84 | 4 | 48 | 219 | 69 | 241 | 2.91e-41 | 141 |
| Msa0413770 | AT3G59470.1 | 46.629 | 178 | 84 | 4 | 48 | 219 | 69 | 241 | 2.91e-41 | 141 |
| Msa0413770 | AT3G59470.2 | 46.629 | 178 | 84 | 4 | 48 | 219 | 81 | 253 | 4.67e-41 | 141 |
| Msa0413770 | AT4G12850.4 | 49.541 | 109 | 51 | 1 | 43 | 151 | 5 | 109 | 4.67e-30 | 109 |
| Msa0413770 | AT4G12850.2 | 48.673 | 113 | 46 | 2 | 43 | 151 | 5 | 109 | 5.55e-30 | 108 |
| Msa0413770 | AT4G38180.1 | 52.336 | 107 | 49 | 1 | 48 | 152 | 72 | 178 | 1.38e-25 | 104 |
| Msa0413770 | AT2G32250.2 | 36.232 | 138 | 78 | 3 | 45 | 182 | 34 | 161 | 2.43e-18 | 84.0 |
| Msa0413770 | AT2G32250.4 | 36.232 | 138 | 78 | 3 | 45 | 182 | 34 | 161 | 2.43e-18 | 84.0 |
| Msa0413770 | AT2G32250.6 | 36.232 | 138 | 78 | 3 | 45 | 182 | 34 | 161 | 2.45e-18 | 84.0 |
| Msa0413770 | AT2G32250.1 | 36.232 | 138 | 78 | 3 | 45 | 182 | 34 | 161 | 2.45e-18 | 84.0 |
| Msa0413770 | AT2G32250.3 | 36.232 | 138 | 78 | 3 | 45 | 182 | 34 | 161 | 2.45e-18 | 84.0 |
| Msa0413770 | AT2G32250.5 | 36.232 | 138 | 78 | 3 | 45 | 182 | 34 | 161 | 2.59e-18 | 83.6 |
| Msa0413770 | AT2G32250.7 | 36.154 | 130 | 73 | 3 | 53 | 182 | 1 | 120 | 4.31e-17 | 80.1 |
| Msa0413770 | AT2G32250.8 | 36.154 | 130 | 73 | 3 | 53 | 182 | 1 | 120 | 4.35e-17 | 80.1 |
| Msa0413770 | AT2G27110.2 | 35.897 | 156 | 80 | 5 | 1 | 154 | 1 | 138 | 3.59e-16 | 77.4 |
| Msa0413770 | AT2G27110.1 | 35.897 | 156 | 80 | 5 | 1 | 154 | 1 | 138 | 3.59e-16 | 77.4 |
| Msa0413770 | AT4G15090.1 | 35.593 | 118 | 74 | 2 | 35 | 152 | 38 | 153 | 3.71e-16 | 77.4 |
| Msa0413770 | AT4G15090.5 | 35.593 | 118 | 74 | 2 | 35 | 152 | 38 | 153 | 3.71e-16 | 77.4 |
| Msa0413770 | AT4G15090.3 | 35.593 | 118 | 74 | 2 | 35 | 152 | 38 | 153 | 3.71e-16 | 77.4 |
| Msa0413770 | AT4G15090.2 | 35.593 | 118 | 74 | 2 | 35 | 152 | 38 | 153 | 3.71e-16 | 77.4 |
| Msa0413770 | AT4G15090.4 | 35.593 | 118 | 74 | 2 | 35 | 152 | 38 | 153 | 3.71e-16 | 77.4 |
| Msa0413770 | AT3G06250.2 | 41.346 | 104 | 47 | 2 | 48 | 151 | 189 | 278 | 4.31e-16 | 77.4 |
| Msa0413770 | AT3G06250.2 | 35.088 | 114 | 60 | 1 | 48 | 161 | 27 | 126 | 2.26e-15 | 75.1 |
| Msa0413770 | AT3G06250.1 | 41.346 | 104 | 47 | 2 | 48 | 151 | 189 | 278 | 4.31e-16 | 77.4 |
| Msa0413770 | AT3G06250.1 | 35.088 | 114 | 60 | 1 | 48 | 161 | 27 | 126 | 2.26e-15 | 75.1 |
| Msa0413770 | AT3G06250.3 | 41.346 | 104 | 47 | 2 | 48 | 151 | 189 | 278 | 4.31e-16 | 77.4 |
| Msa0413770 | AT3G06250.3 | 35.088 | 114 | 60 | 1 | 48 | 161 | 27 | 126 | 2.26e-15 | 75.1 |
| Msa0413770 | AT5G18960.2 | 40.385 | 104 | 48 | 2 | 48 | 151 | 210 | 299 | 1.34e-15 | 75.9 |
| Msa0413770 | AT5G18960.2 | 33.600 | 125 | 62 | 2 | 48 | 165 | 42 | 152 | 1.55e-15 | 75.5 |
| Msa0413770 | AT5G18960.1 | 40.385 | 104 | 48 | 2 | 48 | 151 | 210 | 299 | 1.34e-15 | 75.9 |
| Msa0413770 | AT5G18960.1 | 33.600 | 125 | 62 | 2 | 48 | 165 | 42 | 152 | 1.55e-15 | 75.5 |
| Msa0413770 | AT3G22170.2 | 33.333 | 126 | 72 | 2 | 48 | 161 | 69 | 194 | 5.13e-14 | 71.2 |
| Msa0413770 | AT3G22170.1 | 33.333 | 126 | 72 | 2 | 48 | 161 | 69 | 194 | 5.13e-14 | 71.2 |
| Msa0413770 | AT1G76320.2 | 37.736 | 106 | 60 | 3 | 53 | 158 | 1 | 100 | 1.57e-13 | 69.7 |
| Msa0413770 | AT1G76320.3 | 37.736 | 106 | 60 | 3 | 53 | 158 | 1 | 100 | 1.60e-13 | 69.7 |
| Msa0413770 | AT1G76320.1 | 37.736 | 106 | 60 | 3 | 53 | 158 | 1 | 100 | 1.66e-13 | 69.7 |
| Msa0413770 | AT1G76320.4 | 37.736 | 106 | 60 | 3 | 53 | 158 | 1 | 100 | 1.66e-13 | 69.7 |
| Msa0413770 | AT4G19990.3 | 32.479 | 117 | 63 | 2 | 51 | 153 | 23 | 137 | 8.05e-13 | 67.8 |
| Msa0413770 | AT4G19990.4 | 32.479 | 117 | 63 | 2 | 51 | 153 | 23 | 137 | 8.05e-13 | 67.8 |
| Msa0413770 | AT4G19990.5 | 32.479 | 117 | 63 | 2 | 51 | 153 | 23 | 137 | 8.84e-13 | 67.4 |
| Msa0413770 | AT4G19990.7 | 32.479 | 117 | 63 | 2 | 51 | 153 | 37 | 151 | 9.14e-13 | 67.4 |
| Msa0413770 | AT4G19990.6 | 32.479 | 117 | 63 | 2 | 51 | 153 | 23 | 137 | 9.42e-13 | 67.4 |
| Msa0413770 | AT4G19990.2 | 32.479 | 117 | 63 | 2 | 51 | 153 | 23 | 137 | 9.42e-13 | 67.4 |
Find 61 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTCTGGGGATGGTAATT+TGG | 0.193398 | 3_2:-58492846 | Msa0413770:CDS |
| AGTGACGGGACGGAAGTTTC+TGG | 0.271999 | 3_2:-58492860 | Msa0413770:CDS |
| GTTTCTGGGGATGGTAATTT+GGG | 0.272995 | 3_2:-58492845 | Msa0413770:intron |
| AGATCGGCAAAGAGTTATTC+TGG | 0.305107 | 3_2:-58492213 | Msa0413770:CDS |
| AGTATGATCAGTCTGGAAAA+TGG | 0.314309 | 3_2:-58491903 | Msa0413770:CDS |
| AGGATTCTCGCCCGCAGGTT+TGG | 0.338766 | 3_2:-58492030 | Msa0413770:CDS |
| CCTTCCCTTGTGACGGCCCT+TGG | 0.345255 | 3_2:+58491949 | None:intergenic |
| CCGCAGGTTTGGATGTAATA+AGG | 0.351849 | 3_2:-58492019 | Msa0413770:CDS |
| AGTTATTCTGGGAGAGAGTT+GGG | 0.357444 | 3_2:-58492201 | Msa0413770:CDS |
| ATTATGGATTTACCGTTGTT+TGG | 0.367161 | 3_2:+58491818 | None:intergenic |
| GTCACTTCCATCAACTAATC+TGG | 0.397067 | 3_2:+58492877 | None:intergenic |
| ACGGCCCTTGGTTTACGAAC+TGG | 0.399474 | 3_2:+58491961 | None:intergenic |
| ACAAATTCCATGCCTTCATA+TGG | 0.406605 | 3_2:+58492150 | None:intergenic |
| GAGTTATGACCATGCTGTTA+AGG | 0.413521 | 3_2:-58492175 | Msa0413770:CDS |
| GCCGATCTACACCCATCATT+CGG | 0.425751 | 3_2:+58492228 | None:intergenic |
| CTGGTGCAAAAGCTCTTCTA+TGG | 0.431453 | 3_2:+58491240 | None:intergenic |
| GTGACGGGACGGAAGTTTCT+GGG | 0.432296 | 3_2:-58492859 | Msa0413770:CDS |
| ATGGATTCCAGATTAGTTGA+TGG | 0.443466 | 3_2:-58492884 | Msa0413770:CDS |
| AAATATCTTAGCAGCATCTT+CGG | 0.446381 | 3_2:+58492125 | None:intergenic |
| GGTCATTGCGTCAGCATACA+AGG | 0.449713 | 3_2:-58491994 | Msa0413770:CDS |
| GTATGATCAGTCTGGAAAAT+GGG | 0.452188 | 3_2:-58491902 | Msa0413770:CDS |
| TCATGCGTGTGATGTCTTGT+CGG | 0.467046 | 3_2:-58492071 | Msa0413770:CDS |
| CATATCAAGTATGATCAGTC+TGG | 0.475718 | 3_2:-58491910 | Msa0413770:CDS |
| AGGAACTAACAGTAGAGCTT+CGG | 0.480103 | 3_2:-58491390 | Msa0413770:CDS |
| GAGTTATTCTGGGAGAGAGT+TGG | 0.493345 | 3_2:-58492202 | Msa0413770:CDS |
| GTCAGCATACAAGGGAAACT+TGG | 0.494015 | 3_2:-58491985 | Msa0413770:CDS |
| ACATAATGCAGGGCTACGTC+TGG | 0.504943 | 3_2:+58491221 | None:intergenic |
| CATGACAAATCCTACATGTC+GGG | 0.519329 | 3_2:+58492089 | None:intergenic |
| ATGGAAGGATTCTCGCCCGC+AGG | 0.531144 | 3_2:-58492035 | Msa0413770:CDS |
| GTGACAGTGGAACCGAATGA+TGG | 0.532788 | 3_2:-58492240 | Msa0413770:intron |
| CGTCACAAGGGAAGGTTGCA+AGG | 0.544540 | 3_2:-58491941 | Msa0413770:CDS |
| GATGAATATGCCCGACATGT+AGG | 0.545888 | 3_2:-58492099 | Msa0413770:CDS |
| GATCGGCAAAGAGTTATTCT+GGG | 0.547471 | 3_2:-58492212 | Msa0413770:CDS |
| ACCGAATGATGGGTGTAGAT+CGG | 0.551733 | 3_2:-58492229 | Msa0413770:CDS |
| CTTGCAACCTTCCCTTGTGA+CGG | 0.555795 | 3_2:+58491942 | None:intergenic |
| GTAAACCAAGGGCCGTCACA+AGG | 0.559469 | 3_2:-58491954 | Msa0413770:CDS |
| CCAAGGGCCGTCACAAGGGA+AGG | 0.568415 | 3_2:-58491949 | Msa0413770:CDS |
| AGATTAGTTGATGGAAGTGA+CGG | 0.571217 | 3_2:-58492875 | Msa0413770:CDS |
| CTTATTACATCCAAACCTGC+GGG | 0.573213 | 3_2:+58492020 | None:intergenic |
| GCTGTTAAGGAACCATATGA+AGG | 0.588056 | 3_2:-58492162 | Msa0413770:CDS |
| TAAGGAACCATATGAAGGCA+TGG | 0.594188 | 3_2:-58492157 | Msa0413770:CDS |
| GAAAGATCATAATCATCCAC+TGG | 0.595127 | 3_2:-58491863 | Msa0413770:CDS |
| GCATGACAAATCCTACATGT+CGG | 0.599788 | 3_2:+58492088 | None:intergenic |
| GTTGTTTGGCGTGCTTCACG+TGG | 0.602469 | 3_2:+58491832 | None:intergenic |
| GGGACGGAAGTTTCTGGGGA+TGG | 0.603658 | 3_2:-58492854 | Msa0413770:CDS |
| TAAACCAAGGGCCGTCACAA+GGG | 0.604624 | 3_2:-58491953 | Msa0413770:CDS |
| TGTCGGCACTCAGAAAGAGA+TGG | 0.607052 | 3_2:-58492054 | Msa0413770:CDS |
| CATATGGTTCCTTAACAGCA+TGG | 0.608918 | 3_2:+58492166 | None:intergenic |
| GATTAGTTGATGGAAGTGAC+GGG | 0.614392 | 3_2:-58492874 | Msa0413770:CDS |
| TGACAGTGGAACCGAATGAT+GGG | 0.614797 | 3_2:-58492239 | Msa0413770:intron |
| TTGGTCCAGTTCGTAAACCA+AGG | 0.623231 | 3_2:-58491966 | Msa0413770:CDS |
| CAGGTTTGGATGTAATAAGG+AGG | 0.625678 | 3_2:-58492016 | Msa0413770:CDS |
| CCTTATTACATCCAAACCTG+CGG | 0.631158 | 3_2:+58492019 | None:intergenic |
| TGACGGGACGGAAGTTTCTG+GGG | 0.641298 | 3_2:-58492858 | Msa0413770:CDS |
| TGGTCCAGTTCGTAAACCAA+GGG | 0.644778 | 3_2:-58491965 | Msa0413770:CDS |
| AGGTTTGGATGTAATAAGGA+GGG | 0.648013 | 3_2:-58492015 | Msa0413770:CDS |
| ACGTGAAGCACGCCAAACAA+CGG | 0.653986 | 3_2:-58491830 | Msa0413770:intron |
| AGTTGATGGAAGTGACGGGA+CGG | 0.655681 | 3_2:-58492870 | Msa0413770:CDS |
| GGCACTCAGAAAGAGATGGA+AGG | 0.664011 | 3_2:-58492050 | Msa0413770:CDS |
| GTCATTGCGTCAGCATACAA+GGG | 0.665576 | 3_2:-58491993 | Msa0413770:CDS |
| TCACGTGGAGAGACTACCAG+TGG | 0.673648 | 3_2:+58491847 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTATCAATTAAAAAATA+TGG | + | chr3_2:58492390-58492409 | None:intergenic | 10.0% |
| !!! | GTTTTATCAATTAAAAAATA+TGG | + | chr3_2:58492390-58492409 | None:intergenic | 10.0% |
| !!! | CGAAATTAATTTTACAATAT+AGG | + | chr3_2:58491575-58491594 | None:intergenic | 15.0% |
| !!! | TGATTGTTTTAAATGAAAAA+TGG | + | chr3_2:58491777-58491796 | None:intergenic | 15.0% |
| !!! | CTTCATTTCTATATTTTTTT+TGG | - | chr3_2:58492469-58492488 | Msa0413770:intron | 15.0% |
| !!! | GAAGATAATATTATTGTTTT+TGG | - | chr3_2:58492525-58492544 | Msa0413770:intron | 15.0% |
| !! | ATTATATTATATAACATCTC+TGG | - | chr3_2:58492615-58492634 | Msa0413770:intron | 15.0% |
| !!! | CGAAATTAATTTTACAATAT+AGG | + | chr3_2:58491575-58491594 | None:intergenic | 15.0% |
| !!! | TGATTGTTTTAAATGAAAAA+TGG | + | chr3_2:58491777-58491796 | None:intergenic | 15.0% |
| !!! | CTTCATTTCTATATTTTTTT+TGG | - | chr3_2:58492469-58492488 | Msa0413770:intron | 15.0% |
| !!! | GAAGATAATATTATTGTTTT+TGG | - | chr3_2:58492525-58492544 | Msa0413770:intron | 15.0% |
| !! | ATTATATTATATAACATCTC+TGG | - | chr3_2:58492615-58492634 | Msa0413770:intron | 15.0% |
| !! | TCAAAAGTTATATTATGAAC+AGG | + | chr3_2:58491412-58491431 | None:intergenic | 20.0% |
| !! | AAACGGTTAAATAAGAATTA+TGG | + | chr3_2:58492319-58492338 | None:intergenic | 20.0% |
| !! | TCAAAAGTTATATTATGAAC+AGG | + | chr3_2:58491412-58491431 | None:intergenic | 20.0% |
| !! | AAACGGTTAAATAAGAATTA+TGG | + | chr3_2:58492319-58492338 | None:intergenic | 20.0% |
| ! | AAGAGTTTCAGATTTCTAAT+TGG | - | chr3_2:58491720-58491739 | Msa0413770:intron | 25.0% |
| !!! | GATAAATTATTTTGTGACAG+TGG | - | chr3_2:58491865-58491884 | Msa0413770:CDS | 25.0% |
| !! | ATTTAACCGTTTTCAATCTT+TGG | - | chr3_2:58492327-58492346 | Msa0413770:intron | 25.0% |
| !! | AGTTTTCCAAAGATTGAAAA+CGG | + | chr3_2:58492336-58492355 | None:intergenic | 25.0% |
| ! | ATATTATCTTCTTCTTACCA+AGG | + | chr3_2:58492516-58492535 | None:intergenic | 25.0% |
| ! | TGAGAAGGATAAAAAAATTC+AGG | - | chr3_2:58492708-58492727 | Msa0413770:intron | 25.0% |
| ! | AAGAGTTTCAGATTTCTAAT+TGG | - | chr3_2:58491720-58491739 | Msa0413770:intron | 25.0% |
| !!! | GATAAATTATTTTGTGACAG+TGG | - | chr3_2:58491865-58491884 | Msa0413770:CDS | 25.0% |
| !! | ATTTAACCGTTTTCAATCTT+TGG | - | chr3_2:58492327-58492346 | Msa0413770:intron | 25.0% |
| !! | AGTTTTCCAAAGATTGAAAA+CGG | + | chr3_2:58492336-58492355 | None:intergenic | 25.0% |
| ! | ATATTATCTTCTTCTTACCA+AGG | + | chr3_2:58492516-58492535 | None:intergenic | 25.0% |
| ! | TGAGAAGGATAAAAAAATTC+AGG | - | chr3_2:58492708-58492727 | Msa0413770:intron | 25.0% |
| TTATATTATGAACAGGATGC+GGG | + | chr3_2:58491405-58491424 | None:intergenic | 30.0% | |
| GTTATATTATGAACAGGATG+CGG | + | chr3_2:58491406-58491425 | None:intergenic | 30.0% | |
| !!! | TGGTATTTTTAGAGAAACCT+GGG | + | chr3_2:58491523-58491542 | None:intergenic | 30.0% |
| !!! | TTGGTATTTTTAGAGAAACC+TGG | + | chr3_2:58491524-58491543 | None:intergenic | 30.0% |
| GAAAAATGGAGAAATAAGAG+AGG | + | chr3_2:58491763-58491782 | None:intergenic | 30.0% | |
| AAATATCTTAGCAGCATCTT+CGG | + | chr3_2:58491996-58492015 | None:intergenic | 30.0% | |
| ATTATGGATTTACCGTTGTT+TGG | + | chr3_2:58492303-58492322 | None:intergenic | 30.0% | |
| !!! | TTCTGCGTTGTTTTTGTTTT+AGG | - | chr3_2:58492684-58492703 | Msa0413770:intron | 30.0% |
| !!! | GTTTTTGTTTTAGGATGAGA+AGG | - | chr3_2:58492693-58492712 | Msa0413770:intron | 30.0% |
| TAGAGCTTCGGATTAAAAAA+GGG | - | chr3_2:58492740-58492759 | Msa0413770:intron | 30.0% | |
| TTATATTATGAACAGGATGC+GGG | + | chr3_2:58491405-58491424 | None:intergenic | 30.0% | |
| GTTATATTATGAACAGGATG+CGG | + | chr3_2:58491406-58491425 | None:intergenic | 30.0% | |
| !!! | TGGTATTTTTAGAGAAACCT+GGG | + | chr3_2:58491523-58491542 | None:intergenic | 30.0% |
| !!! | TTGGTATTTTTAGAGAAACC+TGG | + | chr3_2:58491524-58491543 | None:intergenic | 30.0% |
| GAAAAATGGAGAAATAAGAG+AGG | + | chr3_2:58491763-58491782 | None:intergenic | 30.0% | |
| AAATATCTTAGCAGCATCTT+CGG | + | chr3_2:58491996-58492015 | None:intergenic | 30.0% | |
| ATTATGGATTTACCGTTGTT+TGG | + | chr3_2:58492303-58492322 | None:intergenic | 30.0% | |
| !!! | TTCTGCGTTGTTTTTGTTTT+AGG | - | chr3_2:58492684-58492703 | Msa0413770:intron | 30.0% |
| !!! | GTTTTTGTTTTAGGATGAGA+AGG | - | chr3_2:58492693-58492712 | Msa0413770:intron | 30.0% |
| TAGAGCTTCGGATTAAAAAA+GGG | - | chr3_2:58492740-58492759 | Msa0413770:intron | 30.0% | |
| ! | ATGGATTCCAGATTAGTTGA+TGG | - | chr3_2:58491234-58491253 | Msa0413770:CDS | 35.0% |
| !! | AGATTAGTTGATGGAAGTGA+CGG | - | chr3_2:58491243-58491262 | Msa0413770:CDS | 35.0% |
| ATCTCAAGGAAGAATCTGTT+TGG | + | chr3_2:58491543-58491562 | None:intergenic | 35.0% | |
| ATTCTTCCTTGAGATTGCAA+TGG | - | chr3_2:58491548-58491567 | Msa0413770:intron | 35.0% | |
| AAACATGTGAAGTCTAGCTA+CGG | + | chr3_2:58491612-58491631 | None:intergenic | 35.0% | |
| AAAGATAAATCGAGGCTTAG+CGG | + | chr3_2:58491651-58491670 | None:intergenic | 35.0% | |
| TCAATGCCAAAGATAAATCG+AGG | + | chr3_2:58491659-58491678 | None:intergenic | 35.0% | |
| ACAAATTCCATGCCTTCATA+TGG | + | chr3_2:58491971-58491990 | None:intergenic | 35.0% | |
| AGGTTTGGATGTAATAAGGA+GGG | - | chr3_2:58492103-58492122 | Msa0413770:CDS | 35.0% | |
| CATATCAAGTATGATCAGTC+TGG | - | chr3_2:58492208-58492227 | Msa0413770:CDS | 35.0% | |
| AGTATGATCAGTCTGGAAAA+TGG | - | chr3_2:58492215-58492234 | Msa0413770:CDS | 35.0% | |
| GTATGATCAGTCTGGAAAAT+GGG | - | chr3_2:58492216-58492235 | Msa0413770:CDS | 35.0% | |
| GAAAGATCATAATCATCCAC+TGG | - | chr3_2:58492255-58492274 | Msa0413770:intron | 35.0% | |
| TAAAACGTTATATTGTGCCC+AGG | - | chr3_2:58492404-58492423 | Msa0413770:intron | 35.0% | |
| TCTTTCTTCTATACATGCCT+GGG | + | chr3_2:58492424-58492443 | None:intergenic | 35.0% | |
| TTCTTTCTTCTATACATGCC+TGG | + | chr3_2:58492425-58492444 | None:intergenic | 35.0% | |
| AGGCATGTATAGAAGAAAGA+AGG | - | chr3_2:58492424-58492443 | Msa0413770:intron | 35.0% | |
| TAAAACGTTGTATTGTGCCT+TGG | - | chr3_2:58492496-58492515 | Msa0413770:intron | 35.0% | |
| TCACAAAGAGGAGTTAAAAC+AGG | + | chr3_2:58492568-58492587 | None:intergenic | 35.0% | |
| !!! | TGTTTTAACTCCTCTTTGTG+AGG | - | chr3_2:58492567-58492586 | Msa0413770:intron | 35.0% |
| ! | CAAATCTTTTCCTCACAAAG+AGG | + | chr3_2:58492580-58492599 | None:intergenic | 35.0% |
| CTCTTTGTGAGGAAAAGATT+TGG | - | chr3_2:58492578-58492597 | Msa0413770:intron | 35.0% | |
| GTAGAGCTTCGGATTAAAAA+AGG | - | chr3_2:58492739-58492758 | Msa0413770:intron | 35.0% | |
| ! | ATGGATTCCAGATTAGTTGA+TGG | - | chr3_2:58491234-58491253 | Msa0413770:CDS | 35.0% |
| !! | AGATTAGTTGATGGAAGTGA+CGG | - | chr3_2:58491243-58491262 | Msa0413770:CDS | 35.0% |
| ATCTCAAGGAAGAATCTGTT+TGG | + | chr3_2:58491543-58491562 | None:intergenic | 35.0% | |
| ATTCTTCCTTGAGATTGCAA+TGG | - | chr3_2:58491548-58491567 | Msa0413770:intron | 35.0% | |
| AAACATGTGAAGTCTAGCTA+CGG | + | chr3_2:58491612-58491631 | None:intergenic | 35.0% | |
| AAAGATAAATCGAGGCTTAG+CGG | + | chr3_2:58491651-58491670 | None:intergenic | 35.0% | |
| TCAATGCCAAAGATAAATCG+AGG | + | chr3_2:58491659-58491678 | None:intergenic | 35.0% | |
| ACAAATTCCATGCCTTCATA+TGG | + | chr3_2:58491971-58491990 | None:intergenic | 35.0% | |
| AGGTTTGGATGTAATAAGGA+GGG | - | chr3_2:58492103-58492122 | Msa0413770:CDS | 35.0% | |
| CATATCAAGTATGATCAGTC+TGG | - | chr3_2:58492208-58492227 | Msa0413770:CDS | 35.0% | |
| AGTATGATCAGTCTGGAAAA+TGG | - | chr3_2:58492215-58492234 | Msa0413770:CDS | 35.0% | |
| GTATGATCAGTCTGGAAAAT+GGG | - | chr3_2:58492216-58492235 | Msa0413770:CDS | 35.0% | |
| GAAAGATCATAATCATCCAC+TGG | - | chr3_2:58492255-58492274 | Msa0413770:intron | 35.0% | |
| TAAAACGTTATATTGTGCCC+AGG | - | chr3_2:58492404-58492423 | Msa0413770:intron | 35.0% | |
| TCTTTCTTCTATACATGCCT+GGG | + | chr3_2:58492424-58492443 | None:intergenic | 35.0% | |
| TTCTTTCTTCTATACATGCC+TGG | + | chr3_2:58492425-58492444 | None:intergenic | 35.0% | |
| AGGCATGTATAGAAGAAAGA+AGG | - | chr3_2:58492424-58492443 | Msa0413770:intron | 35.0% | |
| TAAAACGTTGTATTGTGCCT+TGG | - | chr3_2:58492496-58492515 | Msa0413770:intron | 35.0% | |
| TCACAAAGAGGAGTTAAAAC+AGG | + | chr3_2:58492568-58492587 | None:intergenic | 35.0% | |
| !!! | TGTTTTAACTCCTCTTTGTG+AGG | - | chr3_2:58492567-58492586 | Msa0413770:intron | 35.0% |
| ! | CAAATCTTTTCCTCACAAAG+AGG | + | chr3_2:58492580-58492599 | None:intergenic | 35.0% |
| CTCTTTGTGAGGAAAAGATT+TGG | - | chr3_2:58492578-58492597 | Msa0413770:intron | 35.0% | |
| GTAGAGCTTCGGATTAAAAA+AGG | - | chr3_2:58492739-58492758 | Msa0413770:intron | 35.0% | |
| GTCACTTCCATCAACTAATC+TGG | + | chr3_2:58491244-58491263 | None:intergenic | 40.0% | |
| !! | GATTAGTTGATGGAAGTGAC+GGG | - | chr3_2:58491244-58491263 | Msa0413770:CDS | 40.0% |
| ! | AGTTTCTGGGGATGGTAATT+TGG | - | chr3_2:58491272-58491291 | Msa0413770:CDS | 40.0% |
| ! | GTTTCTGGGGATGGTAATTT+GGG | - | chr3_2:58491273-58491292 | Msa0413770:CDS | 40.0% |
| TTCTGCTGGTGACTTAATGT+GGG | + | chr3_2:58491476-58491495 | None:intergenic | 40.0% | |
| TTTCTGCTGGTGACTTAATG+TGG | + | chr3_2:58491477-58491496 | None:intergenic | 40.0% | |
| ATAGGTCCATTGCAATCTCA+AGG | + | chr3_2:58491557-58491576 | None:intergenic | 40.0% | |
| GCTAAGCCTCGATTTATCTT+TGG | - | chr3_2:58491650-58491669 | Msa0413770:intron | 40.0% | |
| AGATCGGCAAAGAGTTATTC+TGG | - | chr3_2:58491905-58491924 | Msa0413770:CDS | 40.0% | |
| GATCGGCAAAGAGTTATTCT+GGG | - | chr3_2:58491906-58491925 | Msa0413770:CDS | 40.0% | |
| ! | AGTTATTCTGGGAGAGAGTT+GGG | - | chr3_2:58491917-58491936 | Msa0413770:CDS | 40.0% |
| GAGTTATGACCATGCTGTTA+AGG | - | chr3_2:58491943-58491962 | Msa0413770:CDS | 40.0% | |
| CATATGGTTCCTTAACAGCA+TGG | + | chr3_2:58491955-58491974 | None:intergenic | 40.0% | |
| GCTGTTAAGGAACCATATGA+AGG | - | chr3_2:58491956-58491975 | Msa0413770:CDS | 40.0% | |
| TAAGGAACCATATGAAGGCA+TGG | - | chr3_2:58491961-58491980 | Msa0413770:CDS | 40.0% | |
| CATGACAAATCCTACATGTC+GGG | + | chr3_2:58492032-58492051 | None:intergenic | 40.0% | |
| GCATGACAAATCCTACATGT+CGG | + | chr3_2:58492033-58492052 | None:intergenic | 40.0% | |
| CTTATTACATCCAAACCTGC+GGG | + | chr3_2:58492101-58492120 | None:intergenic | 40.0% | |
| CCTTATTACATCCAAACCTG+CGG | + | chr3_2:58492102-58492121 | None:intergenic | 40.0% | |
| CAGGTTTGGATGTAATAAGG+AGG | - | chr3_2:58492102-58492121 | Msa0413770:CDS | 40.0% | |
| AGGAACTAACAGTAGAGCTT+CGG | - | chr3_2:58492728-58492747 | Msa0413770:intron | 40.0% | |
| GTCACTTCCATCAACTAATC+TGG | + | chr3_2:58491244-58491263 | None:intergenic | 40.0% | |
| !! | GATTAGTTGATGGAAGTGAC+GGG | - | chr3_2:58491244-58491263 | Msa0413770:CDS | 40.0% |
| ! | AGTTTCTGGGGATGGTAATT+TGG | - | chr3_2:58491272-58491291 | Msa0413770:CDS | 40.0% |
| ! | GTTTCTGGGGATGGTAATTT+GGG | - | chr3_2:58491273-58491292 | Msa0413770:CDS | 40.0% |
| TTCTGCTGGTGACTTAATGT+GGG | + | chr3_2:58491476-58491495 | None:intergenic | 40.0% | |
| TTTCTGCTGGTGACTTAATG+TGG | + | chr3_2:58491477-58491496 | None:intergenic | 40.0% | |
| ATAGGTCCATTGCAATCTCA+AGG | + | chr3_2:58491557-58491576 | None:intergenic | 40.0% | |
| GCTAAGCCTCGATTTATCTT+TGG | - | chr3_2:58491650-58491669 | Msa0413770:intron | 40.0% | |
| AGATCGGCAAAGAGTTATTC+TGG | - | chr3_2:58491905-58491924 | Msa0413770:CDS | 40.0% | |
| GATCGGCAAAGAGTTATTCT+GGG | - | chr3_2:58491906-58491925 | Msa0413770:CDS | 40.0% | |
| ! | AGTTATTCTGGGAGAGAGTT+GGG | - | chr3_2:58491917-58491936 | Msa0413770:CDS | 40.0% |
| GAGTTATGACCATGCTGTTA+AGG | - | chr3_2:58491943-58491962 | Msa0413770:CDS | 40.0% | |
| CATATGGTTCCTTAACAGCA+TGG | + | chr3_2:58491955-58491974 | None:intergenic | 40.0% | |
| GCTGTTAAGGAACCATATGA+AGG | - | chr3_2:58491956-58491975 | Msa0413770:CDS | 40.0% | |
| TAAGGAACCATATGAAGGCA+TGG | - | chr3_2:58491961-58491980 | Msa0413770:CDS | 40.0% | |
| CATGACAAATCCTACATGTC+GGG | + | chr3_2:58492032-58492051 | None:intergenic | 40.0% | |
| GCATGACAAATCCTACATGT+CGG | + | chr3_2:58492033-58492052 | None:intergenic | 40.0% | |
| CTTATTACATCCAAACCTGC+GGG | + | chr3_2:58492101-58492120 | None:intergenic | 40.0% | |
| CCTTATTACATCCAAACCTG+CGG | + | chr3_2:58492102-58492121 | None:intergenic | 40.0% | |
| CAGGTTTGGATGTAATAAGG+AGG | - | chr3_2:58492102-58492121 | Msa0413770:CDS | 40.0% | |
| AGGAACTAACAGTAGAGCTT+CGG | - | chr3_2:58492728-58492747 | Msa0413770:intron | 40.0% | |
| TGACAGTGGAACCGAATGAT+GGG | - | chr3_2:58491879-58491898 | Msa0413770:CDS | 45.0% | |
| !! | ACCGAATGATGGGTGTAGAT+CGG | - | chr3_2:58491889-58491908 | Msa0413770:CDS | 45.0% |
| ! | GAGTTATTCTGGGAGAGAGT+TGG | - | chr3_2:58491916-58491935 | Msa0413770:CDS | 45.0% |
| GATGAATATGCCCGACATGT+AGG | - | chr3_2:58492019-58492038 | Msa0413770:CDS | 45.0% | |
| TCATGCGTGTGATGTCTTGT+CGG | - | chr3_2:58492047-58492066 | Msa0413770:CDS | 45.0% | |
| CCGCAGGTTTGGATGTAATA+AGG | - | chr3_2:58492099-58492118 | Msa0413770:CDS | 45.0% | |
| GTCATTGCGTCAGCATACAA+GGG | - | chr3_2:58492125-58492144 | Msa0413770:CDS | 45.0% | |
| GTCAGCATACAAGGGAAACT+TGG | - | chr3_2:58492133-58492152 | Msa0413770:CDS | 45.0% | |
| TTGGTCCAGTTCGTAAACCA+AGG | - | chr3_2:58492152-58492171 | Msa0413770:CDS | 45.0% | |
| TGGTCCAGTTCGTAAACCAA+GGG | - | chr3_2:58492153-58492172 | Msa0413770:CDS | 45.0% | |
| CTGGTGCAAAAGCTCTTCTA+TGG | + | chr3_2:58492881-58492900 | None:intergenic | 45.0% | |
| TGACAGTGGAACCGAATGAT+GGG | - | chr3_2:58491879-58491898 | Msa0413770:CDS | 45.0% | |
| !! | ACCGAATGATGGGTGTAGAT+CGG | - | chr3_2:58491889-58491908 | Msa0413770:CDS | 45.0% |
| ! | GAGTTATTCTGGGAGAGAGT+TGG | - | chr3_2:58491916-58491935 | Msa0413770:CDS | 45.0% |
| GATGAATATGCCCGACATGT+AGG | - | chr3_2:58492019-58492038 | Msa0413770:CDS | 45.0% | |
| TCATGCGTGTGATGTCTTGT+CGG | - | chr3_2:58492047-58492066 | Msa0413770:CDS | 45.0% | |
| CCGCAGGTTTGGATGTAATA+AGG | - | chr3_2:58492099-58492118 | Msa0413770:CDS | 45.0% | |
| GTCATTGCGTCAGCATACAA+GGG | - | chr3_2:58492125-58492144 | Msa0413770:CDS | 45.0% | |
| GTCAGCATACAAGGGAAACT+TGG | - | chr3_2:58492133-58492152 | Msa0413770:CDS | 45.0% | |
| TTGGTCCAGTTCGTAAACCA+AGG | - | chr3_2:58492152-58492171 | Msa0413770:CDS | 45.0% | |
| TGGTCCAGTTCGTAAACCAA+GGG | - | chr3_2:58492153-58492172 | Msa0413770:CDS | 45.0% | |
| CTGGTGCAAAAGCTCTTCTA+TGG | + | chr3_2:58492881-58492900 | None:intergenic | 45.0% | |
| !! | AGTTGATGGAAGTGACGGGA+CGG | - | chr3_2:58491248-58491267 | Msa0413770:CDS | 50.0% |
| TCACCAGCAGAAACTGCTCT+AGG | - | chr3_2:58491484-58491503 | Msa0413770:intron | 50.0% | |
| CACCAGCAGAAACTGCTCTA+GGG | - | chr3_2:58491485-58491504 | Msa0413770:intron | 50.0% | |
| GTGACAGTGGAACCGAATGA+TGG | - | chr3_2:58491878-58491897 | Msa0413770:CDS | 50.0% | |
| GCCGATCTACACCCATCATT+CGG | + | chr3_2:58491893-58491912 | None:intergenic | 50.0% | |
| TGTCGGCACTCAGAAAGAGA+TGG | - | chr3_2:58492064-58492083 | Msa0413770:CDS | 50.0% | |
| GGCACTCAGAAAGAGATGGA+AGG | - | chr3_2:58492068-58492087 | Msa0413770:CDS | 50.0% | |
| GGTCATTGCGTCAGCATACA+AGG | - | chr3_2:58492124-58492143 | Msa0413770:CDS | 50.0% | |
| TAAACCAAGGGCCGTCACAA+GGG | - | chr3_2:58492165-58492184 | Msa0413770:CDS | 50.0% | |
| CTTGCAACCTTCCCTTGTGA+CGG | + | chr3_2:58492179-58492198 | None:intergenic | 50.0% | |
| ACGTGAAGCACGCCAAACAA+CGG | - | chr3_2:58492288-58492307 | Msa0413770:intron | 50.0% | |
| !! | AGTTGATGGAAGTGACGGGA+CGG | - | chr3_2:58491248-58491267 | Msa0413770:CDS | 50.0% |
| TCACCAGCAGAAACTGCTCT+AGG | - | chr3_2:58491484-58491503 | Msa0413770:intron | 50.0% | |
| CACCAGCAGAAACTGCTCTA+GGG | - | chr3_2:58491485-58491504 | Msa0413770:intron | 50.0% | |
| GTGACAGTGGAACCGAATGA+TGG | - | chr3_2:58491878-58491897 | Msa0413770:CDS | 50.0% | |
| GCCGATCTACACCCATCATT+CGG | + | chr3_2:58491893-58491912 | None:intergenic | 50.0% | |
| TGTCGGCACTCAGAAAGAGA+TGG | - | chr3_2:58492064-58492083 | Msa0413770:CDS | 50.0% | |
| GGCACTCAGAAAGAGATGGA+AGG | - | chr3_2:58492068-58492087 | Msa0413770:CDS | 50.0% | |
| GGTCATTGCGTCAGCATACA+AGG | - | chr3_2:58492124-58492143 | Msa0413770:CDS | 50.0% | |
| TAAACCAAGGGCCGTCACAA+GGG | - | chr3_2:58492165-58492184 | Msa0413770:CDS | 50.0% | |
| CTTGCAACCTTCCCTTGTGA+CGG | + | chr3_2:58492179-58492198 | None:intergenic | 50.0% | |
| ACGTGAAGCACGCCAAACAA+CGG | - | chr3_2:58492288-58492307 | Msa0413770:intron | 50.0% | |
| ! | AGTGACGGGACGGAAGTTTC+TGG | - | chr3_2:58491258-58491277 | Msa0413770:CDS | 55.0% |
| ! | GTGACGGGACGGAAGTTTCT+GGG | - | chr3_2:58491259-58491278 | Msa0413770:CDS | 55.0% |
| TGACGGGACGGAAGTTTCTG+GGG | - | chr3_2:58491260-58491279 | Msa0413770:CDS | 55.0% | |
| CACCCTAGAGCAGTTTCTGC+TGG | + | chr3_2:58491490-58491509 | None:intergenic | 55.0% | |
| !! | CAGCAGAAACTGCTCTAGGG+TGG | - | chr3_2:58491488-58491507 | Msa0413770:intron | 55.0% |
| !! | CAGAAACTGCTCTAGGGTGG+CGG | - | chr3_2:58491491-58491510 | Msa0413770:intron | 55.0% |
| !! | AGAAACTGCTCTAGGGTGGC+GGG | - | chr3_2:58491492-58491511 | Msa0413770:intron | 55.0% |
| ACGGCCCTTGGTTTACGAAC+TGG | + | chr3_2:58492160-58492179 | None:intergenic | 55.0% | |
| GTAAACCAAGGGCCGTCACA+AGG | - | chr3_2:58492164-58492183 | Msa0413770:CDS | 55.0% | |
| CGTCACAAGGGAAGGTTGCA+AGG | - | chr3_2:58492177-58492196 | Msa0413770:CDS | 55.0% | |
| TCACGTGGAGAGACTACCAG+TGG | + | chr3_2:58492274-58492293 | None:intergenic | 55.0% | |
| GTTGTTTGGCGTGCTTCACG+TGG | + | chr3_2:58492289-58492308 | None:intergenic | 55.0% | |
| ! | AGTGACGGGACGGAAGTTTC+TGG | - | chr3_2:58491258-58491277 | Msa0413770:CDS | 55.0% |
| ! | GTGACGGGACGGAAGTTTCT+GGG | - | chr3_2:58491259-58491278 | Msa0413770:CDS | 55.0% |
| TGACGGGACGGAAGTTTCTG+GGG | - | chr3_2:58491260-58491279 | Msa0413770:CDS | 55.0% | |
| CACCCTAGAGCAGTTTCTGC+TGG | + | chr3_2:58491490-58491509 | None:intergenic | 55.0% | |
| !! | CAGCAGAAACTGCTCTAGGG+TGG | - | chr3_2:58491488-58491507 | Msa0413770:intron | 55.0% |
| !! | CAGAAACTGCTCTAGGGTGG+CGG | - | chr3_2:58491491-58491510 | Msa0413770:intron | 55.0% |
| !! | AGAAACTGCTCTAGGGTGGC+GGG | - | chr3_2:58491492-58491511 | Msa0413770:intron | 55.0% |
| ACGGCCCTTGGTTTACGAAC+TGG | + | chr3_2:58492160-58492179 | None:intergenic | 55.0% | |
| GTAAACCAAGGGCCGTCACA+AGG | - | chr3_2:58492164-58492183 | Msa0413770:CDS | 55.0% | |
| CGTCACAAGGGAAGGTTGCA+AGG | - | chr3_2:58492177-58492196 | Msa0413770:CDS | 55.0% | |
| TCACGTGGAGAGACTACCAG+TGG | + | chr3_2:58492274-58492293 | None:intergenic | 55.0% | |
| GTTGTTTGGCGTGCTTCACG+TGG | + | chr3_2:58492289-58492308 | None:intergenic | 55.0% | |
| ! | GGGACGGAAGTTTCTGGGGA+TGG | - | chr3_2:58491264-58491283 | Msa0413770:CDS | 60.0% |
| ATGGAAGGATTCTCGCCCGC+AGG | - | chr3_2:58492083-58492102 | Msa0413770:CDS | 60.0% | |
| AGGATTCTCGCCCGCAGGTT+TGG | - | chr3_2:58492088-58492107 | Msa0413770:CDS | 60.0% | |
| ! | GGGACGGAAGTTTCTGGGGA+TGG | - | chr3_2:58491264-58491283 | Msa0413770:CDS | 60.0% |
| ATGGAAGGATTCTCGCCCGC+AGG | - | chr3_2:58492083-58492102 | Msa0413770:CDS | 60.0% | |
| AGGATTCTCGCCCGCAGGTT+TGG | - | chr3_2:58492088-58492107 | Msa0413770:CDS | 60.0% | |
| !! | TAGGGTGGCGGGTCATACCC+AGG | - | chr3_2:58491503-58491522 | Msa0413770:intron | 65.0% |
| CCTTCCCTTGTGACGGCCCT+TGG | + | chr3_2:58492172-58492191 | None:intergenic | 65.0% | |
| CCAAGGGCCGTCACAAGGGA+AGG | - | chr3_2:58492169-58492188 | Msa0413770:CDS | 65.0% | |
| !! | TAGGGTGGCGGGTCATACCC+AGG | - | chr3_2:58491503-58491522 | Msa0413770:intron | 65.0% |
| CCTTCCCTTGTGACGGCCCT+TGG | + | chr3_2:58492172-58492191 | None:intergenic | 65.0% | |
| CCAAGGGCCGTCACAAGGGA+AGG | - | chr3_2:58492169-58492188 | Msa0413770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 58491234 | 58492906 | 58491234 | ID=Msa0413770;Name=Msa0413770 |
| chr3_2 | mRNA | 58491234 | 58492906 | 58491234 | ID=Msa0413770-mRNA-1;Parent=Msa0413770;Name=Msa0413770-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.33|1|0.5|0.66|3|0|228 |
| chr3_2 | exon | 58492846 | 58492906 | 58492846 | ID=Msa0413770-mRNA-1:exon:12132;Parent=Msa0413770-mRNA-1 |
| chr3_2 | exon | 58491831 | 58492255 | 58491831 | ID=Msa0413770-mRNA-1:exon:12131;Parent=Msa0413770-mRNA-1 |
| chr3_2 | exon | 58491234 | 58491434 | 58491234 | ID=Msa0413770-mRNA-1:exon:12130;Parent=Msa0413770-mRNA-1 |
| chr3_2 | CDS | 58492846 | 58492906 | 58492846 | ID=Msa0413770-mRNA-1:cds;Parent=Msa0413770-mRNA-1 |
| chr3_2 | CDS | 58491831 | 58492255 | 58491831 | ID=Msa0413770-mRNA-1:cds;Parent=Msa0413770-mRNA-1 |
| chr3_2 | CDS | 58491234 | 58491434 | 58491234 | ID=Msa0413770-mRNA-1:cds;Parent=Msa0413770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
