AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0415590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415590 MtrunA17_Chr3g0109821 97.474 673 16 1 1 673 1 672 0.0 1377
Msa0415590 MtrunA17_Chr5g0433781 63.704 675 206 20 1 668 1 643 0.0 811
Msa0415590 MtrunA17_Chr2g0309891 51.582 316 127 8 1 300 1 306 1.09e-91 288
Msa0415590 MtrunA17_Chr6g0481091 75.309 162 39 1 1 162 1 161 4.32e-89 278
Msa0415590 MtrunA17_Chr5g0400461 64.634 164 47 2 1 157 1 160 2.20e-70 232
Msa0415590 MtrunA17_Chr4g0054791 53.368 193 75 4 1 180 1 191 4.86e-64 214
Msa0415590 MtrunA17_Chr8g0372121 47.619 189 89 3 1 188 1 180 3.25e-59 201
Msa0415590 MtrunA17_Chr1g0201021 60.494 162 62 2 8 169 21 180 6.32e-59 208
Msa0415590 MtrunA17_Chr3g0128151 62.092 153 57 1 5 157 21 172 1.81e-58 207
Msa0415590 MtrunA17_Chr5g0428991 62.500 152 56 1 6 157 25 175 1.85e-58 208
Msa0415590 MtrunA17_Chr3g0092671 60.123 163 61 3 8 169 7 166 1.62e-57 203
Msa0415590 MtrunA17_Chr4g0018391 54.902 153 65 2 6 157 7 156 1.88e-57 198
Msa0415590 MtrunA17_Chr3g0128111 58.667 150 61 1 9 158 45 193 3.92e-57 194
Msa0415590 MtrunA17_Chr2g0318081 56.604 159 66 2 1 159 11 166 4.56e-57 197
Msa0415590 MtrunA17_Chr1g0197361 58.896 163 63 3 8 169 10 169 1.89e-56 201
Msa0415590 MtrunA17_Chr4g0056541 51.829 164 73 3 6 167 7 166 2.28e-56 196
Msa0415590 MtrunA17_Chr1g0197351 58.721 172 65 2 4 170 40 210 2.96e-56 198
Msa0415590 MtrunA17_Chr1g0200561 55.484 155 65 2 6 159 19 170 5.14e-56 194
Msa0415590 MtrunA17_Chr3g0124761 53.409 176 77 3 4 177 5 177 8.12e-56 191
Msa0415590 MtrunA17_Chr5g0405211 53.205 156 69 2 6 160 8 160 1.04e-55 193
Msa0415590 MtrunA17_Chr3g0130101 55.215 163 69 3 8 169 9 168 1.46e-55 193
Msa0415590 MtrunA17_Chr2g0309331 53.846 156 67 3 4 157 8 160 1.70e-55 192
Msa0415590 MtrunA17_Chr8g0359921 56.875 160 66 2 1 159 9 166 1.99e-55 192
Msa0415590 MtrunA17_Chr4g0017921 48.128 187 88 5 5 188 7 187 2.99e-55 192
Msa0415590 MtrunA17_Chr7g0214071 57.988 169 60 5 4 170 13 172 6.20e-55 188
Msa0415590 MtrunA17_Chr5g0398971 54.839 155 64 4 6 157 7 158 1.28e-54 190
Msa0415590 MtrunA17_Chr6g0484441 56.442 163 64 3 6 168 5 160 1.34e-54 189
Msa0415590 MtrunA17_Chr2g0318101 54.545 165 61 3 6 158 15 177 5.02e-54 189
Msa0415590 MtrunA17_Chr8g0364791 52.071 169 79 2 1 169 1 167 1.11e-53 191
Msa0415590 MtrunA17_Chr8g0384721 46.296 216 93 6 4 199 5 217 1.25e-53 186
Msa0415590 MtrunA17_Chr4g0060931 54.430 158 69 2 4 160 15 170 1.52e-53 187
Msa0415590 MtrunA17_Chr6g0453451 55.128 156 67 2 6 160 20 173 2.29e-53 186
Msa0415590 MtrunA17_Chr4g0042561 52.830 159 70 3 2 157 5 161 2.69e-53 184
Msa0415590 MtrunA17_Chr5g0417791 52.500 160 71 3 4 160 1 158 6.08e-53 183
Msa0415590 MtrunA17_Chr8g0346001 49.693 163 69 3 6 157 15 175 1.63e-52 187
Msa0415590 MtrunA17_Chr3g0091921 56.494 154 64 2 6 158 16 167 3.03e-52 182
Msa0415590 MtrunA17_Chr7g0252971 51.765 170 62 4 4 158 6 170 4.02e-52 183
Msa0415590 MtrunA17_Chr6g0461661 50.898 167 75 4 3 165 15 178 4.78e-52 184
Msa0415590 MtrunA17_Chr1g0147421 55.414 157 62 4 5 158 26 177 8.23e-52 183
Msa0415590 MtrunA17_Chr2g0316971 57.692 156 61 4 6 158 23 176 9.22e-52 183
Msa0415590 MtrunA17_Chr3g0130731 54.375 160 68 3 4 161 5 161 2.38e-51 179
Msa0415590 MtrunA17_Chr3g0139331 55.128 156 63 3 5 158 10 160 3.56e-51 181
Msa0415590 MtrunA17_Chr6g0453131 49.398 166 73 3 6 162 15 178 7.57e-51 181
Msa0415590 MtrunA17_Chr8g0384201 49.112 169 84 2 1 169 1 167 2.36e-50 182
Msa0415590 MtrunA17_Chr2g0312321 51.163 172 77 3 1 169 6 173 2.93e-50 177
Msa0415590 MtrunA17_Chr7g0253011 51.190 168 74 4 4 165 15 180 4.05e-50 179
Msa0415590 MtrunA17_Chr4g0076731 52.597 154 67 3 8 160 56 204 5.79e-50 180
Msa0415590 MtrunA17_Chr1g0183741 43.868 212 85 5 4 188 8 212 6.45e-50 175
Msa0415590 MtrunA17_Chr4g0047841 48.168 191 70 5 6 169 15 203 1.48e-49 176
Msa0415590 MtrunA17_Chr8g0361731 40.086 232 114 7 8 225 16 236 5.69e-49 176
Msa0415590 MtrunA17_Chr7g0261411 54.545 154 61 3 4 155 8 154 8.68e-49 172
Msa0415590 MtrunA17_Chr5g0417001 40.075 267 122 11 8 254 16 264 2.03e-48 174
Msa0415590 MtrunA17_Chr7g0263931 49.686 159 73 5 4 157 9 165 4.01e-48 172
Msa0415590 MtrunA17_Chr2g0326361 51.266 158 70 4 5 157 13 168 5.67e-48 171
Msa0415590 MtrunA17_Chr7g0217721 54.962 131 57 1 4 134 17 145 1.61e-44 162
Msa0415590 MtrunA17_Chr3g0144271 59.542 131 48 4 6 133 23 151 4.49e-44 163
Msa0415590 MtrunA17_Chr2g0311651 47.879 165 71 4 8 158 24 187 4.52e-44 160
Msa0415590 MtrunA17_Chr2g0311661 45.402 174 80 3 8 167 23 195 1.41e-43 158
Msa0415590 MtrunA17_Chr4g0038751 46.341 164 75 4 8 168 17 170 5.48e-43 157
Msa0415590 MtrunA17_Chr5g0442771 48.447 161 70 4 8 157 20 178 1.13e-42 156
Msa0415590 MtrunA17_Chr7g0217711 53.435 131 59 1 4 134 17 145 1.48e-42 152
Msa0415590 MtrunA17_Chr8g0345671 43.350 203 97 6 6 202 11 201 4.81e-41 154
Msa0415590 MtrunA17_Chr8g0385991 49.677 155 68 3 6 154 14 164 7.93e-41 149
Msa0415590 MtrunA17_Chr8g0345691 45.109 184 91 4 6 186 12 188 2.14e-38 147
Msa0415590 MtrunA17_Chr2g0321741 38.889 234 108 7 26 259 12 210 4.43e-38 145
Msa0415590 MtrunA17_Chr3g0131911 47.826 161 71 4 6 157 14 170 8.77e-38 140
Msa0415590 MtrunA17_Chr4g0026141 34.766 256 133 9 6 236 5 251 1.69e-36 137
Msa0415590 MtrunA17_Chr8g0345711 50.000 130 59 4 6 131 12 139 1.31e-35 132
Msa0415590 MtrunA17_Chr2g0321631 41.772 158 81 5 7 155 5 160 2.86e-34 131
Msa0415590 MtrunA17_Chr7g0266701 35.961 203 110 8 6 190 4 204 3.34e-34 131
Msa0415590 MtrunA17_Chr8g0345731 41.139 158 78 5 6 157 24 172 1.16e-31 121
Msa0415590 MtrunA17_Chr3g0113001 51.887 106 49 1 61 164 18 123 2.77e-30 121
Msa0415590 MtrunA17_Chr4g0050701 43.846 130 61 3 6 133 11 130 2.38e-29 115
Msa0415590 MtrunA17_Chr8g0345721 38.690 168 64 6 1 131 26 191 9.10e-28 111
Msa0415590 MtrunA17_Chr8g0345741 45.378 119 61 3 17 132 2 119 1.32e-27 108
Msa0415590 MtrunA17_Chr8g0345701 42.069 145 64 5 5 132 6 147 7.55e-27 107
Msa0415590 MtrunA17_Chr7g0243371 50.000 108 51 3 56 161 12 118 3.06e-26 103
Msa0415590 MtrunA17_Chr3g0113031 48.039 102 50 1 71 169 3 104 3.12e-25 105
Msa0415590 MtrunA17_Chr8g0384351 37.662 154 73 6 4 157 8 138 1.37e-20 90.1
Msa0415590 MtrunA17_Chr3g0130321 30.556 180 106 5 4 172 5 176 2.60e-19 87.0
Msa0415590 MtrunA17_Chr7g0251651 34.884 129 80 3 4 131 16 141 1.61e-18 84.3
Msa0415590 MtrunA17_Chr7g0251661 33.588 131 83 3 2 131 6 133 5.07e-17 79.0
Msa0415590 MtrunA17_Chr7g0251671 32.283 127 82 3 6 131 10 133 3.82e-15 73.6
Msa0415590 MtrunA17_Chr3g0113011 52.941 51 24 0 4 54 17 67 1.28e-13 66.2
Msa0415590 MtrunA17_Chr1g0194791 58.696 46 18 1 8 52 48 93 2.26e-12 63.9
Msa0415590 MtrunA17_Chr3g0113041 48.148 54 28 0 4 57 17 70 3.12e-12 62.4
Msa0415590 MtrunA17_Chr7g0274971 31.250 160 91 9 12 161 11 161 3.59e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415590 AT1G65910.1 43.732 686 306 22 1 664 1 628 5.50e-164 485
Msa0415590 AT5G17260.1 40.348 575 205 19 1 563 1 449 3.38e-120 367
Msa0415590 AT3G03200.1 49.573 351 143 8 1 343 1 325 6.02e-105 328
Msa0415590 AT3G17730.1 76.543 162 37 1 1 162 1 161 4.01e-91 283
Msa0415590 AT1G54330.1 72.892 166 41 1 1 166 1 162 1.66e-81 260
Msa0415590 AT4G17980.1 64.375 160 54 2 1 157 1 160 3.70e-68 224
Msa0415590 AT4G17980.2 64.375 160 54 2 1 157 1 160 4.01e-68 225
Msa0415590 AT5G46590.1 59.006 161 65 1 1 160 1 161 9.55e-67 221
Msa0415590 AT5G04410.1 63.473 167 57 3 4 169 7 170 1.38e-63 221
Msa0415590 AT3G10500.1 62.651 166 60 2 4 169 7 170 2.12e-63 220
Msa0415590 AT1G32510.1 54.839 186 70 2 1 172 1 186 2.41e-63 212
Msa0415590 AT5G46590.2 62.500 144 49 2 1 143 1 140 3.26e-62 209
Msa0415590 AT3G10480.1 59.412 170 68 1 1 170 22 190 3.58e-62 214
Msa0415590 AT1G33060.1 60.784 153 59 1 5 157 23 174 1.46e-61 217
Msa0415590 AT1G33060.2 60.784 153 59 1 5 157 23 174 1.65e-61 217
Msa0415590 AT3G10490.1 59.639 166 66 1 5 170 26 190 3.28e-61 204
Msa0415590 AT1G34190.1 60.000 165 58 3 8 169 18 177 6.70e-61 213
Msa0415590 AT4G35580.1 61.438 153 58 1 5 157 8 159 1.21e-60 212
Msa0415590 AT4G35580.2 61.438 153 58 1 5 157 8 159 1.31e-60 212
Msa0415590 AT4G35580.3 61.438 153 58 1 5 157 8 159 1.38e-60 212
Msa0415590 AT3G10480.2 58.824 170 68 2 1 170 22 189 3.12e-60 209
Msa0415590 AT3G10490.2 59.281 167 67 1 4 170 25 190 1.93e-59 207
Msa0415590 AT4G27410.2 58.491 159 63 2 1 159 9 164 5.28e-59 201
Msa0415590 AT1G34180.3 57.576 165 62 3 8 169 18 177 2.66e-58 203
Msa0415590 AT1G33280.1 54.118 170 71 4 6 174 8 171 3.17e-58 199
Msa0415590 AT4G10350.1 50.000 190 89 5 6 192 9 195 7.94e-58 199
Msa0415590 AT1G34180.1 57.576 165 62 3 8 169 18 177 2.07e-57 204
Msa0415590 AT3G15500.1 59.119 159 62 2 1 159 9 164 2.18e-57 197
Msa0415590 AT3G18400.1 56.774 155 63 2 6 160 5 155 3.00e-57 197
Msa0415590 AT5G24590.2 54.938 162 71 2 1 161 8 168 4.99e-57 200
Msa0415590 AT3G10480.3 50.246 203 67 2 1 170 22 223 7.36e-57 202
Msa0415590 AT5G66300.1 54.321 162 71 2 4 164 10 169 9.20e-57 194
Msa0415590 AT1G12260.2 50.307 163 77 2 6 167 7 166 1.21e-56 196
Msa0415590 AT1G52890.1 52.514 179 82 2 1 179 9 184 1.35e-56 195
Msa0415590 AT2G18060.3 50.588 170 80 2 1 169 4 170 2.17e-56 196
Msa0415590 AT2G18060.1 50.588 170 80 2 1 169 4 170 2.17e-56 196
Msa0415590 AT1G71930.2 43.231 229 107 4 5 218 8 228 2.53e-56 194
Msa0415590 AT1G71930.1 43.231 229 107 4 5 218 8 228 2.53e-56 194
Msa0415590 AT1G12260.1 50.307 163 77 2 6 167 7 166 2.78e-56 196
Msa0415590 AT4G27410.3 53.409 176 62 3 1 159 9 181 8.23e-56 193
Msa0415590 AT2G24430.2 58.974 156 58 3 5 158 15 166 9.25e-56 192
Msa0415590 AT2G24430.1 58.974 156 58 3 5 158 15 166 9.25e-56 192
Msa0415590 AT1G62700.1 49.419 172 83 2 6 176 7 175 1.23e-55 195
Msa0415590 AT1G62700.2 49.419 172 83 2 6 176 7 175 1.23e-55 195
Msa0415590 AT5G39610.1 43.644 236 125 5 4 238 18 246 3.25e-55 190
Msa0415590 AT1G34180.4 53.672 177 62 4 8 169 18 189 3.40e-55 195
Msa0415590 AT4G36160.1 52.903 155 69 2 4 157 8 159 3.78e-55 193
Msa0415590 AT4G36160.3 52.903 155 69 2 4 157 8 159 3.78e-55 193
Msa0415590 AT4G36160.2 52.903 155 69 2 4 157 12 163 3.90e-55 193
Msa0415590 AT5G64060.1 51.479 169 80 2 1 169 1 167 2.30e-54 190
Msa0415590 AT1G34180.2 53.672 177 62 4 8 169 18 189 2.36e-54 196
Msa0415590 AT3G49530.2 53.797 158 71 2 5 161 12 168 3.46e-54 191
Msa0415590 AT3G49530.1 53.797 158 71 2 5 161 12 168 6.86e-54 192
Msa0415590 AT3G04070.2 52.000 175 69 5 5 166 9 181 9.00e-54 188
Msa0415590 AT5G62380.2 53.548 155 64 3 6 157 7 156 1.45e-53 188
Msa0415590 AT5G62380.1 53.548 155 64 3 6 157 7 156 1.45e-53 188
Msa0415590 AT1G69490.1 55.769 156 64 4 5 157 8 161 2.25e-53 184
Msa0415590 AT5G18270.2 55.758 165 66 4 4 163 19 181 4.17e-53 186
Msa0415590 AT5G07680.2 55.414 157 67 2 4 159 1 155 6.81e-53 185
Msa0415590 AT1G79580.3 53.846 156 66 3 4 157 15 166 7.44e-53 186
Msa0415590 AT1G79580.5 53.846 156 66 3 4 157 15 166 7.44e-53 186
Msa0415590 AT1G79580.4 53.846 156 66 3 4 157 15 166 7.44e-53 186
Msa0415590 AT1G79580.2 53.846 156 66 3 4 157 15 166 7.44e-53 186
Msa0415590 AT1G79580.1 53.846 156 66 3 4 157 15 166 7.44e-53 186
Msa0415590 AT5G07680.1 55.414 157 67 2 4 159 15 169 8.03e-53 185
Msa0415590 AT1G32770.1 49.390 164 69 3 6 157 16 177 8.79e-53 186
Msa0415590 AT5G61430.1 55.128 156 67 2 4 158 14 167 1.44e-52 185
Msa0415590 AT5G18270.1 55.152 165 67 4 4 163 19 181 1.49e-52 184
Msa0415590 AT3G29035.1 56.688 157 65 2 4 159 22 176 1.76e-52 184
Msa0415590 AT5G53950.1 56.875 160 64 4 6 162 17 174 2.70e-52 185
Msa0415590 AT3G12977.1 47.253 182 88 2 1 182 13 186 2.83e-52 182
Msa0415590 AT1G01720.1 56.688 157 62 4 4 157 5 158 4.16e-52 182
Msa0415590 AT2G02450.1 50.276 181 78 6 8 185 53 224 6.02e-52 184
Msa0415590 AT3G15170.1 54.375 160 68 4 6 162 20 177 7.17e-52 182
Msa0415590 AT5G09330.5 53.254 169 77 2 1 169 1 167 7.70e-52 187
Msa0415590 AT5G09330.2 53.254 169 77 2 1 169 1 167 7.70e-52 187
Msa0415590 AT5G09330.4 53.254 169 77 2 1 169 1 167 7.70e-52 187
Msa0415590 AT5G09330.3 53.254 169 77 2 1 169 1 167 7.70e-52 187
Msa0415590 AT5G09330.1 53.254 169 77 2 1 169 1 167 7.70e-52 187
Msa0415590 AT2G02450.2 49.444 180 81 5 8 185 53 224 7.75e-52 185
Msa0415590 AT3G61910.1 47.399 173 70 4 6 161 11 179 8.56e-52 182
Msa0415590 AT3G04070.1 47.644 191 69 5 5 166 9 197 2.66e-51 182
Msa0415590 AT1G77450.1 54.321 162 69 3 2 161 6 164 3.85e-51 178
Msa0415590 AT5G08790.1 49.468 188 83 5 4 187 5 184 4.51e-51 179
Msa0415590 AT2G46770.1 49.102 167 68 3 6 157 16 180 7.88e-51 181
Msa0415590 AT2G33480.1 53.896 154 65 2 4 157 13 160 8.33e-51 177
Msa0415590 AT2G33480.2 53.247 154 64 2 4 157 13 158 4.23e-50 176
Msa0415590 AT1G56010.2 54.268 164 66 5 1 159 14 173 6.30e-50 177
Msa0415590 AT3G04060.1 55.769 156 65 3 4 157 18 171 2.08e-49 176
Msa0415590 AT1G76420.1 53.846 156 66 3 5 158 21 172 2.19e-49 176
Msa0415590 AT5G39820.1 42.411 224 97 6 8 201 22 243 2.44e-49 176
Msa0415590 AT5G13180.1 55.769 156 60 3 4 157 12 160 2.45e-49 173
Msa0415590 AT5G63790.1 47.396 192 87 5 2 182 46 234 3.28e-49 175
Msa0415590 AT5G63790.2 47.396 192 87 5 2 182 56 244 3.94e-49 175
Msa0415590 AT1G26870.1 32.041 387 221 9 6 378 16 374 4.18e-49 177
Msa0415590 AT1G61110.1 49.419 172 73 3 6 165 16 185 4.66e-49 175
Msa0415590 AT3G15510.1 49.724 181 64 4 10 178 21 186 9.45e-49 175
Msa0415590 AT1G32870.2 57.576 165 66 3 6 169 10 171 1.30e-48 179
Msa0415590 AT1G32870.1 57.576 165 66 3 6 169 10 171 1.46e-48 179
Msa0415590 AT1G32870.3 57.576 165 66 3 6 169 46 207 2.17e-48 179
Msa0415590 AT3G44290.2 51.235 162 63 4 8 163 16 167 2.27e-48 170
Msa0415590 AT5G22290.1 50.000 154 69 2 1 154 16 161 3.87e-48 172
Msa0415590 AT3G44290.1 51.235 162 63 4 8 163 16 167 9.73e-48 171
Msa0415590 AT2G27300.1 50.633 158 69 2 1 158 9 157 2.69e-47 170
Msa0415590 AT2G17040.1 51.220 164 67 5 8 168 8 161 2.74e-47 168
Msa0415590 AT2G43000.1 52.632 152 70 1 8 159 20 169 3.11e-47 168
Msa0415590 AT4G28530.1 52.047 171 55 7 6 157 10 172 9.05e-46 166
Msa0415590 AT1G52880.1 51.807 166 67 5 10 164 21 184 1.54e-43 159
Msa0415590 AT5G04395.1 48.630 146 61 2 2 133 24 169 7.73e-39 142
Msa0415590 AT3G12910.1 44.910 167 73 5 8 158 23 186 1.63e-36 139
Msa0415590 AT4G10350.2 47.727 132 64 4 63 192 20 148 3.84e-35 135
Msa0415590 AT5G61430.2 58.763 97 39 1 63 158 8 104 4.48e-33 129
Msa0415590 AT3G12977.2 47.500 120 57 1 63 182 20 133 3.22e-32 125
Msa0415590 AT4G01520.1 46.212 132 66 3 7 133 5 136 1.02e-30 122
Msa0415590 AT3G44350.2 39.610 154 89 3 9 158 8 161 2.39e-30 120
Msa0415590 AT5G22380.1 40.523 153 85 4 9 155 8 160 2.62e-30 119
Msa0415590 AT1G56010.1 53.704 108 44 3 55 159 2 106 3.99e-30 120
Msa0415590 AT4G01540.3 45.385 130 66 3 9 133 7 136 6.49e-29 120
Msa0415590 AT4G01550.1 36.408 206 109 6 9 202 7 202 7.62e-29 120
Msa0415590 AT4G01540.4 45.385 130 66 3 9 133 7 136 7.98e-29 119
Msa0415590 AT4G01540.2 45.385 130 66 3 9 133 7 136 9.51e-29 119
Msa0415590 AT2G33480.3 54.737 95 42 1 63 157 10 103 1.10e-28 114
Msa0415590 AT4G01540.1 45.385 130 66 3 9 133 7 136 1.24e-28 120
Msa0415590 AT5G64530.2 41.791 134 62 4 4 135 1 120 3.69e-28 111
Msa0415590 AT4G28530.2 51.695 118 36 4 6 105 10 124 4.36e-28 115
Msa0415590 AT3G04420.2 37.821 156 89 3 7 160 4 153 2.21e-27 113
Msa0415590 AT3G44350.1 41.985 131 72 3 9 135 8 138 4.56e-27 108
Msa0415590 AT5G64530.1 42.424 132 60 4 4 133 1 118 5.32e-27 108
Msa0415590 AT3G04420.1 37.821 156 89 3 7 160 4 153 1.01e-26 112
Msa0415590 AT1G02230.1 43.846 130 65 4 7 131 4 130 5.34e-26 110
Msa0415590 AT3G10490.4 56.667 90 38 1 81 170 2 90 1.80e-25 108
Msa0415590 AT3G10490.3 56.667 90 38 1 81 170 2 90 1.80e-25 108
Msa0415590 AT1G02250.1 37.662 154 81 6 7 154 4 148 3.29e-23 102
Msa0415590 AT1G02220.1 39.370 127 72 2 7 131 4 127 2.73e-22 100
Msa0415590 AT1G01010.1 36.943 157 79 5 9 154 6 153 2.43e-21 97.8
Msa0415590 AT2G43000.2 48.889 90 46 0 70 159 2 91 5.31e-21 92.0
Msa0415590 AT3G56530.1 33.117 154 97 3 4 155 50 199 2.49e-19 90.1
Msa0415590 AT3G55210.1 34.356 163 88 4 6 155 11 167 3.21e-19 89.0
Msa0415590 AT2G18060.2 44.048 84 44 1 86 169 2 82 5.02e-19 88.2
Msa0415590 AT5G14000.2 34.091 132 81 2 4 133 13 140 4.25e-18 82.4
Msa0415590 AT5G50820.1 35.821 134 72 4 4 133 15 138 5.99e-18 83.2
Msa0415590 AT5G14000.1 34.091 132 81 2 4 133 13 140 3.90e-17 80.9
Msa0415590 AT5G22290.2 30.332 211 97 10 87 283 2 176 6.58e-15 75.5
Msa0415590 AT3G04430.1 33.083 133 75 5 12 132 6 136 2.80e-13 69.7
Msa0415590 AT5G56620.2 26.667 285 141 13 4 241 41 304 3.93e-11 65.9
Msa0415590 AT5G56620.1 26.667 285 141 13 4 241 41 304 3.95e-11 65.9
Msa0415590 AT5G56620.3 26.667 285 141 13 4 241 41 304 4.24e-11 65.9

Find 166 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGTTTAAATTCTCAAAT+TGG 0.122100 3_2:+61901830 Msa0415590:three_prime_UTR
TCTTCATCATTTCCCAATTA+TGG 0.131333 3_2:+61899428 Msa0415590:CDS
AACACAAGATCAATTGAAAT+TGG 0.178255 3_2:+61900375 Msa0415590:CDS
CTCTCTCTTAAGGAAGTTTA+AGG 0.184664 3_2:+61901423 Msa0415590:CDS
TTTCATTGCCTCCTGGATTT+AGG 0.185491 3_2:+61897682 Msa0415590:CDS
TTGTGGCAGGATTTGAATTC+TGG 0.193343 3_2:+61897500 Msa0415590:intron
ATTAGGTGTGGATCCATAAT+TGG 0.210005 3_2:-61899441 None:intergenic
GGAATGAGCAAGAGAAAATT+TGG 0.218277 3_2:+61901629 Msa0415590:CDS
TCTCTCCCAGTTGCTCTCTT+AGG 0.229121 3_2:+61897311 Msa0415590:five_prime_UTR
TTGACTTCTTTGTTGATATT+TGG 0.231733 3_2:-61901109 None:intergenic
GGATTTGAATTCTGGCCTTT+TGG 0.237252 3_2:+61897508 Msa0415590:intron
AGAGAGTATCCTTGATTCTT+TGG 0.242721 3_2:-61901406 None:intergenic
GCACTTGCTATTATCTTTGA+TGG 0.248482 3_2:-61901472 None:intergenic
CAATCCTTCCGCCGGTTTGC+AGG 0.250082 3_2:+61898893 Msa0415590:CDS
TACCTCAAAAGAAAGATTAA+TGG 0.252239 3_2:+61897738 Msa0415590:CDS
ACATATTGCTCCCCAACTTT+TGG 0.262023 3_2:-61899167 None:intergenic
GAAGGAAGAGATGAAGTTAT+AGG 0.266178 3_2:+61899257 Msa0415590:CDS
TCACAAGGGATGATGGAATT+TGG 0.272379 3_2:+61899366 Msa0415590:CDS
TCATCTATAAAATTCTCATT+AGG 0.282892 3_2:-61901181 None:intergenic
ACAGTTTAAATTCTCAAATT+GGG 0.285625 3_2:+61901831 Msa0415590:three_prime_UTR
TATTAGTCCCATTCGTGTTT+TGG 0.290824 3_2:-61899319 None:intergenic
AAGCTTGAAATTTCCTCAAT+TGG 0.293235 3_2:-61900918 None:intergenic
ATTTCAATTGATCTTGTGTT+TGG 0.306451 3_2:-61900372 None:intergenic
GAAGATCCTAAGAGAGCAAC+TGG 0.307180 3_2:-61897317 None:intergenic
GAGCAACAAAATCTGGATAT+TGG 0.309075 3_2:+61898721 Msa0415590:CDS
CTATTGGTTCTTGACCCATT+TGG 0.316548 3_2:-61898699 None:intergenic
CTGTACTCTTCTTGAATATA+CGG 0.326332 3_2:-61899136 None:intergenic
ACCAATAGAGCAACAAAATC+TGG 0.328796 3_2:+61898714 Msa0415590:CDS
CAAGAGAAAATTTGGTTTGT+TGG 0.331645 3_2:+61901637 Msa0415590:CDS
AGTTCAACTCAATCCAATTC+TGG 0.331873 3_2:+61901342 Msa0415590:CDS
ATTGCTACCGGGAAAAGATT+TGG 0.335984 3_2:+61898641 Msa0415590:CDS
AACATTGATAATTTCTCAAT+GGG 0.339152 3_2:+61901139 Msa0415590:CDS
TTGGGAAATGATGAAGATAT+TGG 0.344729 3_2:-61899422 None:intergenic
TTGTTTGTGAAGGTGTTATT+TGG 0.349202 3_2:-61901315 None:intergenic
ACCTTGGATGGAGGGTAATT+AGG 0.353293 3_2:-61899458 None:intergenic
ACACAAGATCAATTGAAATT+GGG 0.359406 3_2:+61900376 Msa0415590:CDS
TTCAATAACAAACTATCATA+TGG 0.377945 3_2:-61901750 None:intergenic
AAAGAGCCAAAGATATAGTT+AGG 0.384447 3_2:-61901711 None:intergenic
AAGGAAGAGATGAAGTTATA+GGG 0.388525 3_2:+61899258 Msa0415590:CDS
ATCAAGGATACTCTCTCTTA+AGG 0.390216 3_2:+61901413 Msa0415590:CDS
AGATTATAATATATTTCATA+TGG 0.391416 3_2:+61897653 Msa0415590:exon
CATCTATAAAATTCTCATTA+GGG 0.392715 3_2:-61901180 None:intergenic
GCACCTGTTTCATTGCCTCC+TGG 0.396749 3_2:+61897675 Msa0415590:CDS
CTCTTCCTCTATAGTAAACT+AGG 0.397058 3_2:-61898806 None:intergenic
CAGTGATTGCTCCAAAAGTT+GGG 0.399593 3_2:+61899156 Msa0415590:CDS
TTTGGATATTTCCTATCTCT+AGG 0.400001 3_2:-61898681 None:intergenic
TCTTTCTCTTCAACTAATCA+AGG 0.408185 3_2:+61897338 Msa0415590:five_prime_UTR
ATAGCATGAAGAAAATCATT+TGG 0.409581 3_2:+61901608 Msa0415590:CDS
AAATGAAACAGATATCTTGC+AGG 0.410733 3_2:+61900158 Msa0415590:CDS
TCTGGATATTGGAAGGCAAC+TGG 0.416015 3_2:+61898732 Msa0415590:CDS
CCATGGATCTCGTACGGGTT+GGG 0.416544 3_2:+61898833 Msa0415590:CDS
CACTTGTAGAGATCAACTTC+AGG 0.419704 3_2:-61897786 None:intergenic
TTCTTTGCCTCCCTTGGAGG+TGG 0.430580 3_2:+61900059 Msa0415590:CDS
TCAAAAGGTTGTTCCAATTG+AGG 0.434799 3_2:+61900905 Msa0415590:CDS
GTTGGTATCAAAAGTGGTAA+AGG 0.438741 3_2:+61901655 Msa0415590:CDS
GGTGCTTTGTGTTTATTTGA+AGG 0.441954 3_2:+61901522 Msa0415590:CDS
AATCCAGGAGGCAATGAAAC+AGG 0.443707 3_2:-61897678 None:intergenic
GGATCTTGATAATGAATTCA+AGG 0.446485 3_2:+61900398 Msa0415590:CDS
ACAGTGATTGCTCCAAAAGT+TGG 0.449271 3_2:+61899155 Msa0415590:CDS
TAACATTGATAATTTCTCAA+TGG 0.456609 3_2:+61901138 Msa0415590:CDS
TCAAACTACTCACATGCATT+TGG 0.457307 3_2:+61900225 Msa0415590:CDS
TTTCTTCATTCCAACGGCGC+GGG 0.461408 3_2:-61898781 None:intergenic
TTGGATATTTCCTATCTCTA+GGG 0.464224 3_2:-61898680 None:intergenic
CAATTTATATTCAAATAAAG+AGG 0.466646 3_2:+61897604 Msa0415590:five_prime_UTR
AGAGATAGGAAATATCCAAA+TGG 0.470144 3_2:+61898684 Msa0415590:CDS
GAGGTGGTCTTGAAGAAGAT+AGG 0.470778 3_2:+61901682 Msa0415590:CDS
AAAACCCTAGTTTACTATAG+AGG 0.471807 3_2:+61898801 Msa0415590:CDS
TGGTTTGTTGGTATCAAAAG+TGG 0.479971 3_2:+61901649 Msa0415590:CDS
GTAGAGAATTTAAGATGGGT+TGG 0.480908 3_2:+61900432 Msa0415590:CDS
TTAGGTGTGGATCCATAATT+GGG 0.482044 3_2:-61899440 None:intergenic
TGGGATGTGCTTGGATCCCA+TGG 0.482178 3_2:-61899299 None:intergenic
GCTCAAATTATTTGATGCCA+TGG 0.482678 3_2:+61899282 Msa0415590:CDS
GGGAATGTCACAAGGGATGA+TGG 0.484358 3_2:+61899359 Msa0415590:CDS
CAAAGTCAGAATATGTGAAA+AGG 0.488239 3_2:+61901566 Msa0415590:CDS
GAGATAGGAAATATCCAAAT+GGG 0.489979 3_2:+61898685 Msa0415590:CDS
CCCATGGATCTCGTACGGGT+TGG 0.491599 3_2:+61898832 Msa0415590:CDS
CTTTGGCTCTTTGTACCATG+TGG 0.492296 3_2:+61901722 Msa0415590:CDS
ATGCATGTGAGTAGTTTGAT+TGG 0.498766 3_2:-61900221 None:intergenic
GCACATCCCAAAACACGAAT+GGG 0.508585 3_2:+61899312 Msa0415590:CDS
CATGGTTCAAACCTGCAAAC+CGG 0.510471 3_2:-61898904 None:intergenic
GATGGTAGAGAATTTAAGAT+GGG 0.510921 3_2:+61900428 Msa0415590:CDS
TTCATTTCTAGTTCCACTCA+TGG 0.517202 3_2:-61900142 None:intergenic
CTCAAATTATTTGATGCCAT+GGG 0.519092 3_2:+61899283 Msa0415590:CDS
GAAAGAATGTGTCTGCTACT+TGG 0.522837 3_2:-61901291 None:intergenic
AATTTATATTCAAATAAAGA+GGG 0.523905 3_2:+61897605 Msa0415590:five_prime_UTR
AATGCTCAGACCCGCGCCGT+TGG 0.523934 3_2:+61898771 Msa0415590:CDS
CAGAATTCATACCAACTTGA+GGG 0.526968 3_2:-61900089 None:intergenic
TATAGGGAAGTCATTGCTAC+CGG 0.528788 3_2:+61898629 Msa0415590:intron
TTTGGCTCTTTGTACCATGT+GGG 0.528855 3_2:+61901723 Msa0415590:CDS
CAGTTTAAATTCTCAAATTG+GGG 0.530363 3_2:+61901832 Msa0415590:three_prime_UTR
CACAAGATCAATTGAAATTG+GGG 0.530743 3_2:+61900377 Msa0415590:CDS
CACATTCTCTTTCATCAAGA+CGG 0.530791 3_2:-61898869 None:intergenic
AACAAAATCTGGATATTGGA+AGG 0.532279 3_2:+61898725 Msa0415590:CDS
TAATGGCCGTAGGATTGAGT+TGG 0.534104 3_2:+61897755 Msa0415590:CDS
AGCACCCCATGGATCTCGTA+CGG 0.534764 3_2:+61898827 Msa0415590:CDS
AGGGAAGTCTTCCACCTCCA+AGG 0.535115 3_2:-61900070 None:intergenic
CCCAACCCGTACGAGATCCA+TGG 0.535480 3_2:-61898833 None:intergenic
GATATATTGATGACAAAGCA+TGG 0.540219 3_2:+61900343 Msa0415590:CDS
ATGATTATACCAAAGAATCA+AGG 0.544952 3_2:+61901397 Msa0415590:CDS
TTTCAAGCTTCAAAACAAAG+AGG 0.547034 3_2:+61900931 Msa0415590:CDS
GGATGGTAGAGAATTTAAGA+TGG 0.547842 3_2:+61900427 Msa0415590:CDS
AAGATGACACAATTAGTCTC+AGG 0.549948 3_2:+61900117 Msa0415590:CDS
TGTGAACCATGGGACTTGCC+AGG 0.552299 3_2:+61897807 Msa0415590:CDS
GAAACAAGTTCTTCATCGGT+GGG 0.553122 3_2:-61897711 None:intergenic
TTAACTAGTAGTACCTTGGA+TGG 0.553196 3_2:-61899470 None:intergenic
ACTTGTAGAGATCAACTTCA+GGG 0.553531 3_2:-61897785 None:intergenic
TACAAGCTATGAAGTTGTTG+AGG 0.553873 3_2:+61901228 Msa0415590:CDS
AACTACTCACATGCATTTGG+TGG 0.556142 3_2:+61900228 Msa0415590:CDS
ATAATGAATTCAAGGCTGAA+AGG 0.558323 3_2:+61900406 Msa0415590:CDS
TGAATTCAAGGCTGAAAGGA+TGG 0.559338 3_2:+61900410 Msa0415590:CDS
GTGAAAAGGAAATATAGCTA+TGG 0.559403 3_2:+61901580 Msa0415590:CDS
TTTGTCATCAATATATCTCA+TGG 0.559559 3_2:-61900337 None:intergenic
GAATGTGACAATCCTTCCGC+CGG 0.560777 3_2:+61898885 Msa0415590:CDS
AACAAAGAGGAAAGAGAATG+AGG 0.560950 3_2:+61900944 Msa0415590:CDS
TGAACTTTGATTGTTTGTGA+AGG 0.561663 3_2:-61901325 None:intergenic
ATACTCTCAATAACAATGGT+GGG 0.561919 3_2:+61899339 Msa0415590:CDS
ATAAGAAACAAGTTCTTCAT+CGG 0.563741 3_2:-61897715 None:intergenic
CCAACCCGTACGAGATCCAT+GGG 0.564145 3_2:-61898832 None:intergenic
GAAACAACAAAAGTTAGTCA+TGG 0.565828 3_2:+61901250 Msa0415590:CDS
TATCATATGGTTAGCCCACA+TGG 0.566918 3_2:-61901737 None:intergenic
AGCACATCCCAAAACACGAA+TGG 0.568064 3_2:+61899311 Msa0415590:CDS
AATACTCTCAATAACAATGG+TGG 0.568121 3_2:+61899338 Msa0415590:CDS
CTAGTAGTACCTTGGATGGA+GGG 0.569534 3_2:-61899466 None:intergenic
AGCATTGAGTTGTACTCTGA+AGG 0.569905 3_2:+61899239 Msa0415590:CDS
AGGAAAGAGAATGAGGTGCA+AGG 0.570770 3_2:+61900951 Msa0415590:CDS
ACCTAATTACCCTCCATCCA+AGG 0.571030 3_2:+61899457 Msa0415590:CDS
TGTTTATTTGAAGGAGCAAG+TGG 0.572910 3_2:+61901531 Msa0415590:CDS
TACCGGGAAAAGATTTGGAA+TGG 0.574832 3_2:+61898646 Msa0415590:CDS
AGTGTGCAAGGATGCAACAT+AGG 0.574842 3_2:+61900034 Msa0415590:CDS
CAAGTTCTTCATCGGTGGGG+TGG 0.575721 3_2:-61897707 None:intergenic
AGAAACAAGTTCTTCATCGG+TGG 0.583246 3_2:-61897712 None:intergenic
GGGAAGTCTTCCACCTCCAA+GGG 0.583549 3_2:-61900069 None:intergenic
GCACCCCATGGATCTCGTAC+GGG 0.587091 3_2:+61898828 Msa0415590:CDS
GTGGAAGACTTCCCTCAAGT+TGG 0.590146 3_2:+61900078 Msa0415590:CDS
GTGGGGTGGAACCTAAATCC+AGG 0.594805 3_2:-61897693 None:intergenic
ATTATACCTGGCAAGTCCCA+TGG 0.597224 3_2:-61897813 None:intergenic
GTCAAGCAATGATTTAGAGA+AGG 0.598075 3_2:+61900458 Msa0415590:CDS
TGATCTCCAACTCAATCCTA+CGG 0.598596 3_2:-61897761 None:intergenic
TCTCTACAAGTGTGAACCAT+GGG 0.599917 3_2:+61897797 Msa0415590:CDS
TTAGTCTCAGGTTCCATGAG+TGG 0.599941 3_2:+61900129 Msa0415590:CDS
TCAGAATTCATACCAACTTG+AGG 0.601198 3_2:-61900090 None:intergenic
TCTTCCTCTATAGTAAACTA+GGG 0.609079 3_2:-61898805 None:intergenic
ACTAGTAGTACCTTGGATGG+AGG 0.611789 3_2:-61899467 None:intergenic
ATATAGCACTAGAGTGTGCA+AGG 0.612154 3_2:+61900022 Msa0415590:CDS
GGATGGAGGGTAATTAGGTG+TGG 0.613754 3_2:-61899453 None:intergenic
TTTATATTCAAATAAAGAGG+GGG 0.617945 3_2:+61897607 Msa0415590:five_prime_UTR
ACAATGGTGGGAATGTCACA+AGG 0.618508 3_2:+61899351 Msa0415590:CDS
CAAACCTGCAAACCGGCGGA+AGG 0.621776 3_2:-61898897 None:intergenic
GGCAACTGGAAAAGATCGCA+AGG 0.625272 3_2:+61898746 Msa0415590:CDS
ATATATTGATGACAAAGCAT+GGG 0.629524 3_2:+61900344 Msa0415590:CDS
ACTAATACTCTCAATAACAA+TGG 0.632242 3_2:+61899335 Msa0415590:CDS
AGTGATTGCTCCAAAAGTTG+GGG 0.636145 3_2:+61899157 Msa0415590:CDS
ATAGGGAAGTCATTGCTACC+GGG 0.636793 3_2:+61898630 Msa0415590:intron
ATTTATATTCAAATAAAGAG+GGG 0.641032 3_2:+61897606 Msa0415590:five_prime_UTR
ATCTCTACAAGTGTGAACCA+TGG 0.647017 3_2:+61897796 Msa0415590:CDS
AAGTCTTCCACCTCCAAGGG+AGG 0.647983 3_2:-61900066 None:intergenic
ACATTGATAATTTCTCAATG+GGG 0.649885 3_2:+61901140 Msa0415590:CDS
AAGATCCTAAGAGAGCAACT+GGG 0.652215 3_2:-61897316 None:intergenic
AAAGAAAGATTAATGGCCGT+AGG 0.654666 3_2:+61897745 Msa0415590:CDS
AAACAAGTTCTTCATCGGTG+GGG 0.664766 3_2:-61897710 None:intergenic
TATAGAGGAAGAGCACCCCA+TGG 0.664795 3_2:+61898816 Msa0415590:CDS
GGTTCAAACCTGCAAACCGG+CGG 0.672780 3_2:-61898901 None:intergenic
AATATGTTAATAATGTGACT+AGG 0.676521 3_2:+61899183 Msa0415590:CDS
CAATGGTGGGAATGTCACAA+GGG 0.721046 3_2:+61899352 Msa0415590:CDS
GGGTGGAACCTAAATCCAGG+AGG 0.759574 3_2:-61897690 None:intergenic
CAACCCGTACGAGATCCATG+GGG 0.805597 3_2:-61898831 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATATTCAAATAAAGA+GGG + chr3_2:61897605-61897624 Msa0415590:five_prime_UTR 10.0%
!! AGATTATAATATATTTCATA+TGG + chr3_2:61897653-61897672 Msa0415590:exon 10.0%
!! TATAATAAAAAATGATCAAT+AGG - chr3_2:61899060-61899079 None:intergenic 10.0%
!! TTAAAATCTTTATTATTGTA+CGG - chr3_2:61899897-61899916 None:intergenic 10.0%
!! ACTAAAAACAAAATAAAATT+AGG - chr3_2:61901781-61901800 None:intergenic 10.0%
!! CAATTTATATTCAAATAAAG+AGG + chr3_2:61897604-61897623 Msa0415590:five_prime_UTR 15.0%
!! ATTTATATTCAAATAAAGAG+GGG + chr3_2:61897606-61897625 Msa0415590:five_prime_UTR 15.0%
!! TCTTCTTATAAAATTATCTT+TGG - chr3_2:61898105-61898124 None:intergenic 15.0%
!!! AAAGATAATTTTATAAGAAG+AGG + chr3_2:61898104-61898123 Msa0415590:intron 15.0%
!! TAAGAAATCTTCTTTAATAT+GGG - chr3_2:61898503-61898522 None:intergenic 15.0%
!! TTAAGAAATCTTCTTTAATA+TGG - chr3_2:61898504-61898523 None:intergenic 15.0%
!!! ATTTAATAAGAAATTTTGAG+AGG + chr3_2:61898996-61899015 Msa0415590:intron 15.0%
!!! ATTTTTATGTGATTATTGTA+CGG + chr3_2:61899602-61899621 Msa0415590:intron 15.0%
!! TTAAAAAAATAAGAATCTGA+AGG + chr3_2:61899628-61899647 Msa0415590:intron 15.0%
!! TACAGATTTAAAAAACAATA+AGG - chr3_2:61899770-61899789 None:intergenic 15.0%
!!! AACTTTTACCTTTTAAATTT+TGG + chr3_2:61899870-61899889 Msa0415590:intron 15.0%
!! ACAATTTCCTATAATTTATT+TGG + chr3_2:61899957-61899976 Msa0415590:intron 15.0%
!!! TGAAAATGATTTTACTTTTA+TGG + chr3_2:61900275-61900294 Msa0415590:CDS 15.0%
!!! CATTTTTAAAATCCATTTTT+GGG - chr3_2:61900597-61900616 None:intergenic 15.0%
!! GTATACTTAATAAAATTCTA+GGG - chr3_2:61900634-61900653 None:intergenic 15.0%
!! AGTATACTTAATAAAATTCT+AGG - chr3_2:61900635-61900654 None:intergenic 15.0%
!!! AATAATTTTACAGAGTTTTA+TGG + chr3_2:61900875-61900894 Msa0415590:intron 15.0%
!!! GGGTTTTAAAATTATATATA+GGG + chr3_2:61901852-61901871 Msa0415590:three_prime_UTR 15.0%
!!! GGTTTTAAAATTATATATAG+GGG + chr3_2:61901853-61901872 Msa0415590:three_prime_UTR 15.0%
!! TAAAAAAAAATACAAGTATC+TGG - chr3_2:61901892-61901911 None:intergenic 15.0%
!!! TACTTGTATTTTTTTTTACT+TGG + chr3_2:61901894-61901913 Msa0415590:three_prime_UTR 15.0%
!! AGAAGTTTAATTAAACTTGA+TGG - chr3_2:61897385-61897404 None:intergenic 20.0%
!! TTTATATTCAAATAAAGAGG+GGG + chr3_2:61897607-61897626 Msa0415590:five_prime_UTR 20.0%
!! ATGTCATATAATATTATACC+TGG - chr3_2:61897828-61897847 None:intergenic 20.0%
!!! AAAATCATTATTGGTTAATG+TGG + chr3_2:61898170-61898189 Msa0415590:intron 20.0%
!! AAAGAATCTTAAAAAAGTGA+AGG + chr3_2:61898235-61898254 Msa0415590:intron 20.0%
!!! AGTATATTTTTTTTCCACTT+TGG + chr3_2:61898336-61898355 Msa0415590:intron 20.0%
!!! ATATATTTGCATGTTTTGAA+AGG - chr3_2:61898534-61898553 None:intergenic 20.0%
!! AAACATGCAAATATATAACT+AGG + chr3_2:61898538-61898557 Msa0415590:intron 20.0%
!! ATTATGCATGAAATCATTAT+AGG + chr3_2:61898612-61898631 Msa0415590:intron 20.0%
!! TTATGCATGAAATCATTATA+GGG + chr3_2:61898613-61898632 Msa0415590:intron 20.0%
!! TACTAGTTAGTAATAAAGTT+AGG - chr3_2:61898932-61898951 None:intergenic 20.0%
!! ATTACTAACTAGTATATGAT+TGG + chr3_2:61898938-61898957 Msa0415590:intron 20.0%
!! AATAAAAAATGATCAATAGG+TGG - chr3_2:61899057-61899076 None:intergenic 20.0%
!! TTGAAAAAAATTGTGATTTC+AGG + chr3_2:61899097-61899116 Msa0415590:intron 20.0%
!! AATATGTTAATAATGTGACT+AGG + chr3_2:61899183-61899202 Msa0415590:CDS 20.0%
!! ACACCAAAACTTAATTAAAT+AGG + chr3_2:61899501-61899520 Msa0415590:intron 20.0%
!!! TCTAGAATTATTTTACATTG+TGG - chr3_2:61899925-61899944 None:intergenic 20.0%
!! TTCATGACCAAATAAATTAT+AGG - chr3_2:61899967-61899986 None:intergenic 20.0%
!! AATTCTTCTTAATTATTTGC+AGG + chr3_2:61899996-61900015 Msa0415590:intron 20.0%
!!! AATGATTTTACTTTTATGGT+TGG + chr3_2:61900279-61900298 Msa0415590:CDS 20.0%
!! ATATTATAAAGTCCCAAAAA+TGG + chr3_2:61900582-61900601 Msa0415590:intron 20.0%
!!! GCATTTTTAAAATCCATTTT+TGG - chr3_2:61900598-61900617 None:intergenic 20.0%
!!! TTAATAAAATTCTAGGGTAT+GGG - chr3_2:61900628-61900647 None:intergenic 20.0%
!!! TAATGTTATCTTTTGAGTAT+TGG + chr3_2:61900737-61900756 Msa0415590:intron 20.0%
!! TATTCAATATTATAGGGTTT+AGG - chr3_2:61900818-61900837 None:intergenic 20.0%
!!! TTTATTTTTGTAATTGACCT+TGG + chr3_2:61901005-61901024 Msa0415590:intron 20.0%
!! AGTAAGTTAAAAAAAATCCA+AGG - chr3_2:61901025-61901044 None:intergenic 20.0%
!!! TAACATTGATAATTTCTCAA+TGG + chr3_2:61901138-61901157 Msa0415590:CDS 20.0%
!!! AACATTGATAATTTCTCAAT+GGG + chr3_2:61901139-61901158 Msa0415590:CDS 20.0%
!! CATCTATAAAATTCTCATTA+GGG - chr3_2:61901183-61901202 None:intergenic 20.0%
!! TCATCTATAAAATTCTCATT+AGG - chr3_2:61901184-61901203 None:intergenic 20.0%
!!! AATGAGAATTTTATAGATGA+TGG + chr3_2:61901184-61901203 Msa0415590:CDS 20.0%
!!! GATTTTTTATTTTCCAGAAT+TGG - chr3_2:61901358-61901377 None:intergenic 20.0%
!!! AATTTTCCTAACTATATCTT+TGG + chr3_2:61901705-61901724 Msa0415590:CDS 20.0%
!! TTCAATAACAAACTATCATA+TGG - chr3_2:61901753-61901772 None:intergenic 20.0%
!!! TGTTTTTAGTTTCTAACTTA+AGG + chr3_2:61901791-61901810 Msa0415590:three_prime_UTR 20.0%
!! AACAGTTTAAATTCTCAAAT+TGG + chr3_2:61901830-61901849 Msa0415590:three_prime_UTR 20.0%
!! ACAGTTTAAATTCTCAAATT+GGG + chr3_2:61901831-61901850 Msa0415590:three_prime_UTR 20.0%
!!! GGGGTTTTAAAATTATATAT+AGG + chr3_2:61901851-61901870 Msa0415590:three_prime_UTR 20.0%
!!! TTTTTTATTACCATGCTTGT+AGG + chr3_2:61897455-61897474 Msa0415590:intron 25.0%
!! TTTTTATTACCATGCTTGTA+GGG + chr3_2:61897456-61897475 Msa0415590:intron 25.0%
!!! TAATTTTGGCTTGTTTTTTG+TGG + chr3_2:61897483-61897502 Msa0415590:intron 25.0%
! ATAAGAAACAAGTTCTTCAT+CGG - chr3_2:61897718-61897737 None:intergenic 25.0%
! TACCTCAAAAGAAAGATTAA+TGG + chr3_2:61897738-61897757 Msa0415590:CDS 25.0%
! CTGATTGACAAAATCATTAT+TGG + chr3_2:61898161-61898180 Msa0415590:intron 25.0%
!! CTAAATATTTTATGCCAAAG+TGG - chr3_2:61898353-61898372 None:intergenic 25.0%
! CTTTGGCATAAAATATTTAG+AGG + chr3_2:61898353-61898372 Msa0415590:intron 25.0%
! TAGTAATAAAGTTAGGTTCA+TGG - chr3_2:61898925-61898944 None:intergenic 25.0%
!! TAGTATATGATTGGTTAATG+TGG + chr3_2:61898947-61898966 Msa0415590:intron 25.0%
! ACTAATACTCTCAATAACAA+TGG + chr3_2:61899335-61899354 Msa0415590:CDS 25.0%
!! TGGCCTATTTAATTAAGTTT+TGG - chr3_2:61899507-61899526 None:intergenic 25.0%
! ACCAAAAATCTGTAACAAAT+TGG - chr3_2:61899527-61899546 None:intergenic 25.0%
!! CCTCTAAACAACTTTTTATT+TGG - chr3_2:61899673-61899692 None:intergenic 25.0%
! CCAAATAAAAAGTTGTTTAG+AGG + chr3_2:61899670-61899689 Msa0415590:intron 25.0%
!!! AGAATTATTTTACATTGTGG+AGG - chr3_2:61899922-61899941 None:intergenic 25.0%
! TTTGTCATCAATATATCTCA+TGG - chr3_2:61900340-61900359 None:intergenic 25.0%
!! ATATATTGATGACAAAGCAT+GGG + chr3_2:61900344-61900363 Msa0415590:CDS 25.0%
! ATTTCAATTGATCTTGTGTT+TGG - chr3_2:61900375-61900394 None:intergenic 25.0%
! AACACAAGATCAATTGAAAT+TGG + chr3_2:61900375-61900394 Msa0415590:CDS 25.0%
! ACACAAGATCAATTGAAATT+GGG + chr3_2:61900376-61900395 Msa0415590:CDS 25.0%
!!! CTTAATAAAATTCTAGGGTA+TGG - chr3_2:61900629-61900648 None:intergenic 25.0%
! TATTCTTATGAGTACTATCA+AGG + chr3_2:61900769-61900788 Msa0415590:intron 25.0%
! AAAGCTATTGTTAGTCAATT+TGG - chr3_2:61901063-61901082 None:intergenic 25.0%
! TTGACTTCTTTGTTGATATT+TGG - chr3_2:61901112-61901131 None:intergenic 25.0%
!! ACATTGATAATTTCTCAATG+GGG + chr3_2:61901140-61901159 Msa0415590:CDS 25.0%
! ATGATTATACCAAAGAATCA+AGG + chr3_2:61901397-61901416 Msa0415590:CDS 25.0%
!!! GTTCATATTTGCACTTTTTT+TGG + chr3_2:61901501-61901520 Msa0415590:CDS 25.0%
! ATAGCATGAAGAAAATCATT+TGG + chr3_2:61901608-61901627 Msa0415590:CDS 25.0%
! CAGTTTAAATTCTCAAATTG+GGG + chr3_2:61901832-61901851 Msa0415590:three_prime_UTR 25.0%
TCTTTCTCTTCAACTAATCA+AGG + chr3_2:61897338-61897357 Msa0415590:five_prime_UTR 30.0%
ATCCATGCAAACAAAAATAG+AGG + chr3_2:61898040-61898059 Msa0415590:intron 30.0%
!!! AACCTCTATTTTTGTTTGCA+TGG - chr3_2:61898045-61898064 None:intergenic 30.0%
GTCAATCAGAACAAAATAAG+AGG - chr3_2:61898150-61898169 None:intergenic 30.0%
ACTTAACATATTAGGGAGAA+TGG + chr3_2:61898379-61898398 Msa0415590:intron 30.0%
CATAGTAATGAGGAAATAGT+TGG + chr3_2:61898440-61898459 Msa0415590:intron 30.0%
!!! TTGTTGACTGTTTTTGAGTT+GGG - chr3_2:61898469-61898488 None:intergenic 30.0%
!!! TTTGTTGACTGTTTTTGAGT+TGG - chr3_2:61898470-61898489 None:intergenic 30.0%
ACTCAAAAACAGTCAACAAA+AGG + chr3_2:61898470-61898489 Msa0415590:intron 30.0%
AAAACAGTCAACAAAAGGAA+AGG + chr3_2:61898475-61898494 Msa0415590:intron 30.0%
TTGGATATTTCCTATCTCTA+GGG - chr3_2:61898683-61898702 None:intergenic 30.0%
TTTGGATATTTCCTATCTCT+AGG - chr3_2:61898684-61898703 None:intergenic 30.0%
AGAGATAGGAAATATCCAAA+TGG + chr3_2:61898684-61898703 Msa0415590:CDS 30.0%
GAGATAGGAAATATCCAAAT+GGG + chr3_2:61898685-61898704 Msa0415590:CDS 30.0%
AACAAAATCTGGATATTGGA+AGG + chr3_2:61898725-61898744 Msa0415590:CDS 30.0%
AAAACCCTAGTTTACTATAG+AGG + chr3_2:61898801-61898820 Msa0415590:CDS 30.0%
TCTTCCTCTATAGTAAACTA+GGG - chr3_2:61898808-61898827 None:intergenic 30.0%
! ATATGATTGGTTAATGTGGA+CGG + chr3_2:61898951-61898970 Msa0415590:intron 30.0%
CTGTACTCTTCTTGAATATA+CGG - chr3_2:61899139-61899158 None:intergenic 30.0%
AAGGAAGAGATGAAGTTATA+GGG + chr3_2:61899258-61899277 Msa0415590:CDS 30.0%
CTCAAATTATTTGATGCCAT+GGG + chr3_2:61899283-61899302 Msa0415590:CDS 30.0%
AATACTCTCAATAACAATGG+TGG + chr3_2:61899338-61899357 Msa0415590:CDS 30.0%
ATACTCTCAATAACAATGGT+GGG + chr3_2:61899339-61899358 Msa0415590:CDS 30.0%
TTGGGAAATGATGAAGATAT+TGG - chr3_2:61899425-61899444 None:intergenic 30.0%
TCTTCATCATTTCCCAATTA+TGG + chr3_2:61899428-61899447 Msa0415590:CDS 30.0%
GAAATTAACTAGTAGTACCT+TGG - chr3_2:61899477-61899496 None:intergenic 30.0%
!!! GCCAATTTGTTACAGATTTT+TGG + chr3_2:61899523-61899542 Msa0415590:intron 30.0%
TGTACGGACCAAAATTTAAA+AGG - chr3_2:61899881-61899900 None:intergenic 30.0%
TCTTCTTAATTATTTGCAGG+TGG + chr3_2:61899999-61900018 Msa0415590:intron 30.0%
AAATGAAACAGATATCTTGC+AGG + chr3_2:61900158-61900177 Msa0415590:CDS 30.0%
! GATATATTGATGACAAAGCA+TGG + chr3_2:61900343-61900362 Msa0415590:CDS 30.0%
CACAAGATCAATTGAAATTG+GGG + chr3_2:61900377-61900396 Msa0415590:CDS 30.0%
!! GGATCTTGATAATGAATTCA+AGG + chr3_2:61900398-61900417 Msa0415590:CDS 30.0%
ATAATGAATTCAAGGCTGAA+AGG + chr3_2:61900406-61900425 Msa0415590:CDS 30.0%
! GATGGTAGAGAATTTAAGAT+GGG + chr3_2:61900428-61900447 Msa0415590:CDS 30.0%
CATAGAAATCCACCATATAT+AGG + chr3_2:61900547-61900566 Msa0415590:intron 30.0%
AAAAGATAGCCTATATATGG+TGG - chr3_2:61900559-61900578 None:intergenic 30.0%
! ACCATATATAGGCTATCTTT+TGG + chr3_2:61900558-61900577 Msa0415590:intron 30.0%
ACCAAAAGATAGCCTATATA+TGG - chr3_2:61900562-61900581 None:intergenic 30.0%
ACATCAAATGATTGGATGTT+AGG - chr3_2:61900659-61900678 None:intergenic 30.0%
TACATGTGACATCAAATGAT+TGG - chr3_2:61900667-61900686 None:intergenic 30.0%
!!! TTTTATGGAAGAGCATCAAA+AGG + chr3_2:61900890-61900909 Msa0415590:CDS 30.0%
AAGCTTGAAATTTCCTCAAT+TGG - chr3_2:61900921-61900940 None:intergenic 30.0%
TTTCAAGCTTCAAAACAAAG+AGG + chr3_2:61900931-61900950 Msa0415590:CDS 30.0%
GAAACAACAAAAGTTAGTCA+TGG + chr3_2:61901250-61901269 Msa0415590:CDS 30.0%
!! TTGTTTGTGAAGGTGTTATT+TGG - chr3_2:61901318-61901337 None:intergenic 30.0%
TGAACTTTGATTGTTTGTGA+AGG - chr3_2:61901328-61901347 None:intergenic 30.0%
! CTTTTCACATATTCTGACTT+TGG - chr3_2:61901568-61901587 None:intergenic 30.0%
CAAAGTCAGAATATGTGAAA+AGG + chr3_2:61901566-61901585 Msa0415590:CDS 30.0%
GTGAAAAGGAAATATAGCTA+TGG + chr3_2:61901580-61901599 Msa0415590:CDS 30.0%
!! CAAGAGAAAATTTGGTTTGT+TGG + chr3_2:61901637-61901656 Msa0415590:CDS 30.0%
AAAGAGCCAAAGATATAGTT+AGG - chr3_2:61901714-61901733 None:intergenic 30.0%
AATTAAGAACCCTACAAGCA+TGG - chr3_2:61897468-61897487 None:intergenic 35.0%
! GCTTGTAGGGTTCTTAATTT+TGG + chr3_2:61897469-61897488 Msa0415590:intron 35.0%
GTTACACACCCAAAAAAACT+GGG - chr3_2:61897534-61897553 None:intergenic 35.0%
! AGGGGGTGCATATATAAATT+TGG + chr3_2:61897624-61897643 Msa0415590:five_prime_UTR 35.0%
! GGCCATTAATCTTTCTTTTG+AGG - chr3_2:61897743-61897762 None:intergenic 35.0%
AAAGAAAGATTAATGGCCGT+AGG + chr3_2:61897745-61897764 Msa0415590:CDS 35.0%
ACTTGTAGAGATCAACTTCA+GGG - chr3_2:61897788-61897807 None:intergenic 35.0%
TTGGTCAGTGTTCAAAACTA+AGG - chr3_2:61898086-61898105 None:intergenic 35.0%
!! AGGTTGATCTTTTCATCTCA+AGG - chr3_2:61898130-61898149 None:intergenic 35.0%
GAAACACATGCTTGCTTTAT+TGG + chr3_2:61898310-61898329 Msa0415590:intron 35.0%
! AGAGGCGTACTTAACATATT+AGG + chr3_2:61898371-61898390 Msa0415590:intron 35.0%
GAGGCGTACTTAACATATTA+GGG + chr3_2:61898372-61898391 Msa0415590:intron 35.0%
GAGAATGGTCCTTCAAAATA+GGG + chr3_2:61898394-61898413 Msa0415590:intron 35.0%
!! CAACAGTAACCCTATTTTGA+AGG - chr3_2:61898406-61898425 None:intergenic 35.0%
GCAAATATATAACTAGGTCG+AGG + chr3_2:61898544-61898563 Msa0415590:intron 35.0%
! TACCATTCCAAATCTTTTCC+CGG - chr3_2:61898651-61898670 None:intergenic 35.0%
!!! ATTTTTTCAGCCCTAGAGAT+AGG + chr3_2:61898670-61898689 Msa0415590:CDS 35.0%
ACCAATAGAGCAACAAAATC+TGG + chr3_2:61898714-61898733 Msa0415590:CDS 35.0%
! TCCAGATTTTGTTGCTCTAT+TGG - chr3_2:61898718-61898737 None:intergenic 35.0%
GAGCAACAAAATCTGGATAT+TGG + chr3_2:61898721-61898740 Msa0415590:CDS 35.0%
! TAGGGTTTTCTTCATTCCAA+CGG - chr3_2:61898790-61898809 None:intergenic 35.0%
CTCTTCCTCTATAGTAAACT+AGG - chr3_2:61898809-61898828 None:intergenic 35.0%
CACATTCTCTTTCATCAAGA+CGG - chr3_2:61898872-61898891 None:intergenic 35.0%
GAAGGAAGAGATGAAGTTAT+AGG + chr3_2:61899257-61899276 Msa0415590:CDS 35.0%
GCTCAAATTATTTGATGCCA+TGG + chr3_2:61899282-61899301 Msa0415590:CDS 35.0%
! ATTAGTCCCATTCGTGTTTT+GGG - chr3_2:61899321-61899340 None:intergenic 35.0%
! TATTAGTCCCATTCGTGTTT+TGG - chr3_2:61899322-61899341 None:intergenic 35.0%
TTAGGTGTGGATCCATAATT+GGG - chr3_2:61899443-61899462 None:intergenic 35.0%
ATTAGGTGTGGATCCATAAT+TGG - chr3_2:61899444-61899463 None:intergenic 35.0%
TTAACTAGTAGTACCTTGGA+TGG - chr3_2:61899473-61899492 None:intergenic 35.0%
CAGAATTCATACCAACTTGA+GGG - chr3_2:61900092-61900111 None:intergenic 35.0%
TCAGAATTCATACCAACTTG+AGG - chr3_2:61900093-61900112 None:intergenic 35.0%
! AAGATGACACAATTAGTCTC+AGG + chr3_2:61900117-61900136 Msa0415590:CDS 35.0%
!! TTCATTTCTAGTTCCACTCA+TGG - chr3_2:61900145-61900164 None:intergenic 35.0%
ATGCATGTGAGTAGTTTGAT+TGG - chr3_2:61900224-61900243 None:intergenic 35.0%
TCAAACTACTCACATGCATT+TGG + chr3_2:61900225-61900244 Msa0415590:CDS 35.0%
GGATGGTAGAGAATTTAAGA+TGG + chr3_2:61900427-61900446 Msa0415590:CDS 35.0%
! GTAGAGAATTTAAGATGGGT+TGG + chr3_2:61900432-61900451 Msa0415590:CDS 35.0%
GTCAAGCAATGATTTAGAGA+AGG + chr3_2:61900458-61900477 Msa0415590:CDS 35.0%
TCAAAAGGTTGTTCCAATTG+AGG + chr3_2:61900905-61900924 Msa0415590:CDS 35.0%
AACAAAGAGGAAAGAGAATG+AGG + chr3_2:61900944-61900963 Msa0415590:CDS 35.0%
TACAAGCTATGAAGTTGTTG+AGG + chr3_2:61901228-61901247 Msa0415590:CDS 35.0%
AGTTCAACTCAATCCAATTC+TGG + chr3_2:61901342-61901361 Msa0415590:CDS 35.0%
!! AGAGAGTATCCTTGATTCTT+TGG - chr3_2:61901409-61901428 None:intergenic 35.0%
ATCAAGGATACTCTCTCTTA+AGG + chr3_2:61901413-61901432 Msa0415590:CDS 35.0%
CTCTCTCTTAAGGAAGTTTA+AGG + chr3_2:61901423-61901442 Msa0415590:CDS 35.0%
!! GCACTTGCTATTATCTTTGA+TGG - chr3_2:61901475-61901494 None:intergenic 35.0%
GGTGCTTTGTGTTTATTTGA+AGG + chr3_2:61901522-61901541 Msa0415590:CDS 35.0%
TGTTTATTTGAAGGAGCAAG+TGG + chr3_2:61901531-61901550 Msa0415590:CDS 35.0%
GGAATGAGCAAGAGAAAATT+TGG + chr3_2:61901629-61901648 Msa0415590:CDS 35.0%
!! TGGTTTGTTGGTATCAAAAG+TGG + chr3_2:61901649-61901668 Msa0415590:CDS 35.0%
GTTGGTATCAAAAGTGGTAA+AGG + chr3_2:61901655-61901674 Msa0415590:CDS 35.0%
! CAAAAGTGGTAAAGGTTTTG+AGG + chr3_2:61901663-61901682 Msa0415590:CDS 35.0%
AAGATCCTAAGAGAGCAACT+GGG - chr3_2:61897319-61897338 None:intergenic 40.0%
!!! TTTGGCTTGTTTTTTGTGGC+AGG + chr3_2:61897487-61897506 Msa0415590:intron 40.0%
TTGTGGCAGGATTTGAATTC+TGG + chr3_2:61897500-61897519 Msa0415590:intron 40.0%
!! GGATTTGAATTCTGGCCTTT+TGG + chr3_2:61897508-61897527 Msa0415590:intron 40.0%
!! CCTTTTGGCCCAGTTTTTTT+GGG + chr3_2:61897523-61897542 Msa0415590:five_prime_UTR 40.0%
CGTTACACACCCAAAAAAAC+TGG - chr3_2:61897535-61897554 None:intergenic 40.0%
!!! GTTTTTTTGGGTGTGTAACG+AGG + chr3_2:61897535-61897554 Msa0415590:five_prime_UTR 40.0%
TTTCATTGCCTCCTGGATTT+AGG + chr3_2:61897682-61897701 Msa0415590:CDS 40.0%
AAACAAGTTCTTCATCGGTG+GGG - chr3_2:61897713-61897732 None:intergenic 40.0%
GAAACAAGTTCTTCATCGGT+GGG - chr3_2:61897714-61897733 None:intergenic 40.0%
AGAAACAAGTTCTTCATCGG+TGG - chr3_2:61897715-61897734 None:intergenic 40.0%
TGATCTCCAACTCAATCCTA+CGG - chr3_2:61897764-61897783 None:intergenic 40.0%
CACTTGTAGAGATCAACTTC+AGG - chr3_2:61897789-61897808 None:intergenic 40.0%
ATCTCTACAAGTGTGAACCA+TGG + chr3_2:61897796-61897815 Msa0415590:CDS 40.0%
TCTCTACAAGTGTGAACCAT+GGG + chr3_2:61897797-61897816 Msa0415590:CDS 40.0%
GGAGAATGGTCCTTCAAAAT+AGG + chr3_2:61898393-61898412 Msa0415590:intron 40.0%
CGTCAAGGTACATAGTAATG+AGG + chr3_2:61898430-61898449 Msa0415590:intron 40.0%
TATAGGGAAGTCATTGCTAC+CGG + chr3_2:61898629-61898648 Msa0415590:intron 40.0%
ATTGCTACCGGGAAAAGATT+TGG + chr3_2:61898641-61898660 Msa0415590:CDS 40.0%
TACCGGGAAAAGATTTGGAA+TGG + chr3_2:61898646-61898665 Msa0415590:CDS 40.0%
!! CTATTGGTTCTTGACCCATT+TGG - chr3_2:61898702-61898721 None:intergenic 40.0%
ACAGTGATTGCTCCAAAAGT+TGG + chr3_2:61899155-61899174 Msa0415590:CDS 40.0%
CAGTGATTGCTCCAAAAGTT+GGG + chr3_2:61899156-61899175 Msa0415590:CDS 40.0%
AGTGATTGCTCCAAAAGTTG+GGG + chr3_2:61899157-61899176 Msa0415590:CDS 40.0%
! ACATATTGCTCCCCAACTTT+TGG - chr3_2:61899170-61899189 None:intergenic 40.0%
! AGCATTGAGTTGTACTCTGA+AGG + chr3_2:61899239-61899258 Msa0415590:CDS 40.0%
!! TCACAAGGGATGATGGAATT+TGG + chr3_2:61899366-61899385 Msa0415590:CDS 40.0%
ATATAGCACTAGAGTGTGCA+AGG + chr3_2:61900022-61900041 Msa0415590:CDS 40.0%
AACTACTCACATGCATTTGG+TGG + chr3_2:61900228-61900247 Msa0415590:CDS 40.0%
TGAATTCAAGGCTGAAAGGA+TGG + chr3_2:61900410-61900429 Msa0415590:CDS 40.0%
GAAAGAATGTGTCTGCTACT+TGG - chr3_2:61901294-61901313 None:intergenic 40.0%
!!! AAGTGGTAAAGGTTTTGAGG+TGG + chr3_2:61901666-61901685 Msa0415590:CDS 40.0%
!! TTTGGCTCTTTGTACCATGT+GGG + chr3_2:61901723-61901742 Msa0415590:CDS 40.0%
! TATCATATGGTTAGCCCACA+TGG - chr3_2:61901740-61901759 None:intergenic 40.0%
GAAGATCCTAAGAGAGCAAC+TGG - chr3_2:61897320-61897339 None:intergenic 45.0%
! GCCTTTTGGCCCAGTTTTTT+TGG + chr3_2:61897522-61897541 Msa0415590:five_prime_UTR 45.0%
CCCAAAAAAACTGGGCCAAA+AGG - chr3_2:61897526-61897545 None:intergenic 45.0%
AATCCAGGAGGCAATGAAAC+AGG - chr3_2:61897681-61897700 None:intergenic 45.0%
TAATGGCCGTAGGATTGAGT+TGG + chr3_2:61897755-61897774 Msa0415590:CDS 45.0%
ATTATACCTGGCAAGTCCCA+TGG - chr3_2:61897816-61897835 None:intergenic 45.0%
GGTTACTGTTGTGAACGTCA+AGG + chr3_2:61898415-61898434 Msa0415590:intron 45.0%
ATAGGGAAGTCATTGCTACC+GGG + chr3_2:61898630-61898649 Msa0415590:intron 45.0%
TCTGGATATTGGAAGGCAAC+TGG + chr3_2:61898732-61898751 Msa0415590:CDS 45.0%
! TTTTCTTCATTCCAACGGCG+CGG - chr3_2:61898785-61898804 None:intergenic 45.0%
CATGGTTCAAACCTGCAAAC+CGG - chr3_2:61898907-61898926 None:intergenic 45.0%
!!! TTCGTGTTTTGGGATGTGCT+TGG - chr3_2:61899311-61899330 None:intergenic 45.0%
AGCACATCCCAAAACACGAA+TGG + chr3_2:61899311-61899330 Msa0415590:CDS 45.0%
GCACATCCCAAAACACGAAT+GGG + chr3_2:61899312-61899331 Msa0415590:CDS 45.0%
! ACAATGGTGGGAATGTCACA+AGG + chr3_2:61899351-61899370 Msa0415590:CDS 45.0%
! CAATGGTGGGAATGTCACAA+GGG + chr3_2:61899352-61899371 Msa0415590:CDS 45.0%
ACCTAATTACCCTCCATCCA+AGG + chr3_2:61899457-61899476 Msa0415590:CDS 45.0%
ACCTTGGATGGAGGGTAATT+AGG - chr3_2:61899461-61899480 None:intergenic 45.0%
CTAGTAGTACCTTGGATGGA+GGG - chr3_2:61899469-61899488 None:intergenic 45.0%
ACTAGTAGTACCTTGGATGG+AGG - chr3_2:61899470-61899489 None:intergenic 45.0%
AGTGTGCAAGGATGCAACAT+AGG + chr3_2:61900034-61900053 Msa0415590:CDS 45.0%
! TAGGTTTTCTTTGCCTCCCT+TGG + chr3_2:61900053-61900072 Msa0415590:CDS 45.0%
TTAGTCTCAGGTTCCATGAG+TGG + chr3_2:61900129-61900148 Msa0415590:CDS 45.0%
AGGAAAGAGAATGAGGTGCA+AGG + chr3_2:61900951-61900970 Msa0415590:CDS 45.0%
! GAGGTGGTCTTGAAGAAGAT+AGG + chr3_2:61901682-61901701 Msa0415590:CDS 45.0%
!! CTTTGGCTCTTTGTACCATG+TGG + chr3_2:61901722-61901741 Msa0415590:CDS 45.0%
!!! TTTTTTAATAAAAATAGTAA+AGG + chr3_2:61899030-61899049 Msa0415590:intron 5.0%
!! ATTAAATATTCAATATTATA+GGG - chr3_2:61900824-61900843 None:intergenic 5.0%
!! TATTAAATATTCAATATTAT+AGG - chr3_2:61900825-61900844 None:intergenic 5.0%
!! AATATTTAATAAATTAACAT+TGG + chr3_2:61900834-61900853 Msa0415590:intron 5.0%
TCTCTCCCAGTTGCTCTCTT+AGG + chr3_2:61897311-61897330 Msa0415590:five_prime_UTR 50.0%
GGCAACTGGAAAAGATCGCA+AGG + chr3_2:61898746-61898765 Msa0415590:CDS 50.0%
TTTCTTCATTCCAACGGCGC+GGG - chr3_2:61898784-61898803 None:intergenic 50.0%
!! TATAGAGGAAGAGCACCCCA+TGG + chr3_2:61898816-61898835 Msa0415590:CDS 50.0%
GAATGTGACAATCCTTCCGC+CGG + chr3_2:61898885-61898904 Msa0415590:CDS 50.0%
GGGAATGTCACAAGGGATGA+TGG + chr3_2:61899359-61899378 Msa0415590:CDS 50.0%
GGATGGAGGGTAATTAGGTG+TGG - chr3_2:61899456-61899475 None:intergenic 50.0%
! GTTTTCTTTGCCTCCCTTGG+AGG + chr3_2:61900056-61900075 Msa0415590:CDS 50.0%
GTGGAAGACTTCCCTCAAGT+TGG + chr3_2:61900078-61900097 Msa0415590:CDS 50.0%
GCACCTGTTTCATTGCCTCC+TGG + chr3_2:61897675-61897694 Msa0415590:CDS 55.0%
GGGTGGAACCTAAATCCAGG+AGG - chr3_2:61897693-61897712 None:intergenic 55.0%
GTGGGGTGGAACCTAAATCC+AGG - chr3_2:61897696-61897715 None:intergenic 55.0%
CAAGTTCTTCATCGGTGGGG+TGG - chr3_2:61897710-61897729 None:intergenic 55.0%
TGTGAACCATGGGACTTGCC+AGG + chr3_2:61897807-61897826 Msa0415590:CDS 55.0%
AGCACCCCATGGATCTCGTA+CGG + chr3_2:61898827-61898846 Msa0415590:CDS 55.0%
CAACCCGTACGAGATCCATG+GGG - chr3_2:61898834-61898853 None:intergenic 55.0%
CCAACCCGTACGAGATCCAT+GGG - chr3_2:61898835-61898854 None:intergenic 55.0%
CCATGGATCTCGTACGGGTT+GGG + chr3_2:61898833-61898852 Msa0415590:CDS 55.0%
GGTTCAAACCTGCAAACCGG+CGG - chr3_2:61898904-61898923 None:intergenic 55.0%
TGGGATGTGCTTGGATCCCA+TGG - chr3_2:61899302-61899321 None:intergenic 55.0%
TTCTTTGCCTCCCTTGGAGG+TGG + chr3_2:61900059-61900078 Msa0415590:CDS 55.0%
AAGTCTTCCACCTCCAAGGG+AGG - chr3_2:61900069-61900088 None:intergenic 55.0%
GGGAAGTCTTCCACCTCCAA+GGG - chr3_2:61900072-61900091 None:intergenic 55.0%
AGGGAAGTCTTCCACCTCCA+AGG - chr3_2:61900073-61900092 None:intergenic 55.0%
GCACCCCATGGATCTCGTAC+GGG + chr3_2:61898828-61898847 Msa0415590:CDS 60.0%
CCCATGGATCTCGTACGGGT+TGG + chr3_2:61898832-61898851 Msa0415590:CDS 60.0%
CCCAACCCGTACGAGATCCA+TGG - chr3_2:61898836-61898855 None:intergenic 60.0%
!! CAATCCTTCCGCCGGTTTGC+AGG + chr3_2:61898893-61898912 Msa0415590:CDS 60.0%
CAAACCTGCAAACCGGCGGA+AGG - chr3_2:61898900-61898919 None:intergenic 60.0%
AATGCTCAGACCCGCGCCGT+TGG + chr3_2:61898771-61898790 Msa0415590:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 61897292 61901933 61897292 ID=Msa0415590;Name=Msa0415590
chr3_2 mRNA 61897292 61901933 61897292 ID=Msa0415590-mRNA-1;Parent=Msa0415590;Name=Msa0415590-mRNA-1;_AED=0.04;_eAED=0.04;_QI=231|1|1|1|0.83|0.71|7|162|673
chr3_2 exon 61897292 61897359 61897292 ID=Msa0415590-mRNA-1:exon:13165;Parent=Msa0415590-mRNA-1
chr3_2 exon 61897509 61897828 61897509 ID=Msa0415590-mRNA-1:exon:13166;Parent=Msa0415590-mRNA-1
chr3_2 exon 61898634 61898914 61898634 ID=Msa0415590-mRNA-1:exon:13167;Parent=Msa0415590-mRNA-1
chr3_2 exon 61899119 61899478 61899119 ID=Msa0415590-mRNA-1:exon:13168;Parent=Msa0415590-mRNA-1
chr3_2 exon 61900018 61900479 61900018 ID=Msa0415590-mRNA-1:exon:13169;Parent=Msa0415590-mRNA-1
chr3_2 exon 61900888 61900972 61900888 ID=Msa0415590-mRNA-1:exon:13170;Parent=Msa0415590-mRNA-1
chr3_2 exon 61901095 61901933 61901095 ID=Msa0415590-mRNA-1:exon:13171;Parent=Msa0415590-mRNA-1
chr3_2 five_prime_UTR 61897292 61897359 61897292 ID=Msa0415590-mRNA-1:five_prime_utr;Parent=Msa0415590-mRNA-1
chr3_2 five_prime_UTR 61897509 61897671 61897509 ID=Msa0415590-mRNA-1:five_prime_utr;Parent=Msa0415590-mRNA-1
chr3_2 CDS 61897672 61897828 61897672 ID=Msa0415590-mRNA-1:cds;Parent=Msa0415590-mRNA-1
chr3_2 CDS 61898634 61898914 61898634 ID=Msa0415590-mRNA-1:cds;Parent=Msa0415590-mRNA-1
chr3_2 CDS 61899119 61899478 61899119 ID=Msa0415590-mRNA-1:cds;Parent=Msa0415590-mRNA-1
chr3_2 CDS 61900018 61900479 61900018 ID=Msa0415590-mRNA-1:cds;Parent=Msa0415590-mRNA-1
chr3_2 CDS 61900888 61900972 61900888 ID=Msa0415590-mRNA-1:cds;Parent=Msa0415590-mRNA-1
chr3_2 CDS 61901095 61901771 61901095 ID=Msa0415590-mRNA-1:cds;Parent=Msa0415590-mRNA-1
chr3_2 three_prime_UTR 61901772 61901933 61901772 ID=Msa0415590-mRNA-1:three_prime_utr;Parent=Msa0415590-mRNA-1
Gene Sequence

>Msa0415590

ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCCACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGCTACCGGGAAAAGATTTGGAATGGTATTTTTTCAGCCCTAGAGATAGGAAATATCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACTGGAAAAGATCGCAAGGTGAATGCTCAGACCCGCGCCGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCCCATGGATCTCGTACGGGTTGGGTTATGCATGAGTACCGTCTTGATGAAAGAGAATGTGACAATCCTTCCGCCGGTTTGCAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATTGCTCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACTAGGCATGCAAATCATATGACAAGTGATCAATCATCAAGCATTGAGTTGTACTCTGAAGGAAGAGATGAAGTTATAGGGAGCTCAAATTATTTGATGCCATGGGATCCAAGCACATCCCAAAACACGAATGGGACTAATACTCTCAATAACAATGGTGGGAATGTCACAAGGGATGATGGAATTTGGACACAATTCTTATCAGAAGACTTACTCAGTCTTCCAATATCTTCATCATTTCCCAATTATGGATCCACACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTTCTTTGCCTCCCTTGGAGGTGGAAGACTTCCCTCAAGTTGGTATGAATTCTGAGCTGAAGATGACACAATTAGTCTCAGGTTCCATGAGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAAGAATTGATAAACCAATCAAACTACTCACATGCATTTGGTGGCAATGAAAATTATGCTACTGATCATGAAAATGATTTTACTTTTATGGTTGGAAATAATTACAATCATGTGACTGATCATATGAATTCCATGAGATATATTGATGACAAAGCATGGGAAGATCCAAACACAAGATCAATTGAAATTGGGGATCTTGATAATGAATTCAAGGCTGAAAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGGAAATTTCAAGCTTCAAAACAAAGAGGAAAGAGAATGAGGTGCAAGTAGAATCTGAGCAACCAAATATCAACAAAGAAGTCAATGATGCTAACATTGATAATTTCTCAATGGGGTTTATCAATGATAATGACCCTAATGAGAATTTTATAGATGATGGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGCCAAGTAGCAGACACATTCTTTCACCAAATAACACCTTCACAAACAATCAAAGTTCAACTCAATCCAATTCTGGAAAATAAAAAATCTATAGAGAATGCAGAGACAATGATTATACCAAAGAATCAAGGATACTCTCTCTTAAGGAAGTTTAAGGCTAATTTGATGAAGTACATGAAAAATCCATCAAAGATAATAGCAAGTGCAATTGTGTTCATATTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTGGAAGATATGAAACCAAAGTCAGAATATGTGAAAAGGAAATATAGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAATGAGCAAGAGAAAATTTGGTTTGTTGGTATCAAAAGTGGTAAAGGTTTTGAGGTGGTCTTGAAGAAGATAGGAATTTTCCTAACTATATCTTTGGCTCTTTGTACCATGTGGGCTAACCATATGATAGTTTGTTATTGA
Protein sequence

>Msa0415590

MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNAQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSAGLQDAYALCRIFKKSTVIAPKVGEQYVNNVTRHANHMTSDQSSSIELYSEGRDEVIGSSNYLMPWDPSTSQNTNGTNTLNNNGGNVTRDDGIWTQFLSEDLLSLPISSSFPNYGSTPNYPPSKVDIALECARMQHRFSLPPLEVEDFPQVGMNSELKMTQLVSGSMSGTRNETDILQEILSVAQASQELINQSNYSHAFGGNENYATDHENDFTFMVGNNYNHVTDHMNSMRYIDDKAWEDPNTRSIEIGDLDNEFKAERMVENLRWVGMSSNDLEKSFMEEHQKVVPIEEISSFKTKRKENEVQVESEQPNINKEVNDANIDNFSMGFINDNDPNENFIDDGNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPILENKKSIENAETMIIPKNQGYSLLRKFKANLMKYMKNPSKIIASAIVFIFALFLVLCVYLKEQVEDMKPKSEYVKRKYSYGANSMKKIIWNEQEKIWFVGIKSGKGFEVVLKKIGIFLTISLALCTMWANHMIVCY*