Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418610 | XP_013460954.1 | 92.963 | 1009 | 44 | 1 | 246 | 1227 | 564 | 1572 | 0.0 | 1874 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418610 | sp|Q9STM3|REF6_ARATH | 44.807 | 337 | 155 | 5 | 435 | 766 | 724 | 1034 | 1.12e-71 | 266 |
Msa0418610 | sp|Q9STM3|REF6_ARATH | 35.657 | 502 | 240 | 13 | 748 | 1224 | 913 | 1356 | 5.35e-68 | 255 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418610 | A0A072V0U6 | 92.963 | 1009 | 44 | 1 | 246 | 1227 | 564 | 1572 | 0.0 | 1874 |
Gene ID | Type | Classification |
---|---|---|
Msa0418610 | TF | C2H2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418610 | MtrunA17_Chr3g0116441 | 92.963 | 1009 | 44 | 1 | 246 | 1227 | 564 | 1572 | 0.0 | 1874 |
Msa0418610 | MtrunA17_Chr1g0205571 | 84.231 | 260 | 11 | 2 | 1 | 230 | 3 | 262 | 3.64e-140 | 441 |
Msa0418610 | MtrunA17_Chr1g0199511 | 52.353 | 170 | 56 | 2 | 1054 | 1223 | 1334 | 1478 | 2.82e-50 | 195 |
Msa0418610 | MtrunA17_Chr1g0199511 | 37.600 | 125 | 74 | 3 | 448 | 571 | 700 | 821 | 1.50e-16 | 85.9 |
Msa0418610 | MtrunA17_Chr4g0065981 | 36.667 | 270 | 134 | 4 | 3 | 238 | 7 | 273 | 4.38e-45 | 174 |
Msa0418610 | MtrunA17_Chr4g0023321 | 37.165 | 261 | 125 | 6 | 3 | 229 | 7 | 262 | 2.04e-44 | 162 |
Msa0418610 | MtrunA17_Chr1g0205541 | 36.653 | 251 | 119 | 5 | 12 | 229 | 18 | 261 | 6.91e-41 | 161 |
Msa0418610 | MtrunA17_Chr4g0065961 | 36.531 | 271 | 134 | 5 | 1 | 238 | 1 | 266 | 1.62e-39 | 157 |
Msa0418610 | MtrunA17_Chr4g0065991 | 48.077 | 104 | 52 | 1 | 137 | 238 | 3 | 106 | 2.68e-23 | 105 |
Msa0418610 | MtrunA17_Chr3g0119641 | 31.325 | 249 | 113 | 9 | 25 | 229 | 78 | 312 | 2.28e-20 | 97.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0418610 | AT3G48430.2 | 46.474 | 312 | 136 | 5 | 435 | 741 | 365 | 650 | 3.28e-74 | 268 |
Msa0418610 | AT3G48430.2 | 35.657 | 502 | 240 | 13 | 748 | 1224 | 554 | 997 | 6.89e-69 | 252 |
Msa0418610 | AT3G48430.1 | 44.807 | 337 | 155 | 5 | 435 | 766 | 724 | 1034 | 1.14e-72 | 266 |
Msa0418610 | AT3G48430.1 | 35.657 | 502 | 240 | 13 | 748 | 1224 | 913 | 1356 | 5.44e-69 | 255 |
Msa0418610 | AT1G31690.1 | 48.101 | 237 | 90 | 4 | 24 | 229 | 26 | 260 | 9.41e-60 | 219 |
Msa0418610 | AT1G31670.1 | 43.307 | 254 | 105 | 5 | 9 | 228 | 91 | 339 | 1.92e-55 | 207 |
Msa0418610 | AT1G31710.1 | 42.510 | 247 | 107 | 4 | 25 | 238 | 28 | 272 | 2.04e-54 | 203 |
Msa0418610 | AT5G04240.1 | 66.055 | 109 | 37 | 0 | 1112 | 1220 | 1229 | 1337 | 2.14e-44 | 176 |
Msa0418610 | AT5G04240.1 | 33.333 | 102 | 68 | 0 | 445 | 546 | 647 | 748 | 2.80e-13 | 75.5 |
Msa0418610 | AT4G14940.1 | 35.652 | 230 | 116 | 4 | 6 | 205 | 5 | 232 | 9.27e-34 | 139 |
Msa0418610 | AT1G62810.1 | 32.530 | 249 | 122 | 8 | 17 | 229 | 54 | 292 | 3.95e-26 | 116 |
Msa0418610 | AT4G12290.2 | 31.687 | 243 | 111 | 10 | 25 | 225 | 82 | 311 | 1.65e-22 | 104 |
Msa0418610 | AT4G12290.1 | 31.687 | 243 | 111 | 10 | 25 | 225 | 82 | 311 | 2.32e-22 | 104 |
Msa0418610 | AT3G43670.1 | 28.340 | 247 | 126 | 7 | 17 | 225 | 35 | 268 | 1.59e-20 | 98.2 |
Msa0418610 | AT4G12270.1 | 32.114 | 246 | 107 | 11 | 25 | 225 | 84 | 314 | 4.83e-20 | 95.5 |
Find 273 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCTCTTTGGCAAGGTTTC+TGG | 0.062437 | 3_2:-66386423 | None:intergenic |
AGCTACAGCTCTTGCATTAT+TGG | 0.121042 | 3_2:+66383936 | Msa0418610:CDS |
CAGAATCCCTTATTGCTAAA+AGG | 0.167612 | 3_2:-66385625 | None:intergenic |
CTCAGTTTCAGAGGATTCTT+TGG | 0.208317 | 3_2:+66386166 | Msa0418610:CDS |
CCGTTTGGTCCAAAGCTTAA+AGG | 0.225115 | 3_2:+66382382 | Msa0418610:CDS |
AACTTGCCTGCATACATATT+TGG | 0.229273 | 3_2:-66382954 | None:intergenic |
TGCTTCCTCGTCCTCTGATT+TGG | 0.231448 | 3_2:-66387194 | None:intergenic |
TGACTTTAACTGTCCTTCTT+TGG | 0.234048 | 3_2:-66386487 | None:intergenic |
TACTCAGTTCCTTCAGCTTT+TGG | 0.241847 | 3_2:-66382337 | None:intergenic |
ACAGTTGGTGGCAGAAGATT+TGG | 0.259584 | 3_2:+66385262 | Msa0418610:CDS |
AAGGCATTTGCTTGCTATAA+AGG | 0.271415 | 3_2:-66385451 | None:intergenic |
GCTTCCTCGTCCTCTGATTT+GGG | 0.282643 | 3_2:-66387193 | None:intergenic |
GAACTATATGTGGTGGAATA+AGG | 0.282774 | 3_2:-66384240 | None:intergenic |
CAAAATGTAAAGCCTCTTCT+TGG | 0.288186 | 3_2:-66383891 | None:intergenic |
CTTCGTTTGGATTGTTTACT+TGG | 0.289979 | 3_2:-66386866 | None:intergenic |
CTGTTTAACTGTCCTTCGTT+TGG | 0.298489 | 3_2:-66386879 | None:intergenic |
ATCTTCCTCTGCTACACATT+TGG | 0.302212 | 3_2:-66386516 | None:intergenic |
GGTTCTATCGGTGAGCTTGC+TGG | 0.305490 | 3_2:-66385512 | None:intergenic |
ATGGGTTGGGTTGCTGCCTC+TGG | 0.311715 | 3_2:+66382876 | Msa0418610:CDS |
AGTTTATTGCATTTGATTCA+TGG | 0.317217 | 3_2:-66384008 | None:intergenic |
TTGCTTCTAACAAACCTTCT+TGG | 0.326399 | 3_2:-66385861 | None:intergenic |
CAGTTGGTGGCAGAAGATTT+GGG | 0.328325 | 3_2:+66385263 | Msa0418610:CDS |
TGATGATAAGGATGTGGTTT+TGG | 0.332791 | 3_2:+66385806 | Msa0418610:CDS |
CAGGATTATAAAATCACTTC+AGG | 0.339815 | 3_2:+66384189 | Msa0418610:CDS |
GCCCTTCTCTGATAAACCTT+TGG | 0.343862 | 3_2:-66385533 | None:intergenic |
ATAGTCGGCATGCTTGCTTC+TGG | 0.346214 | 3_2:-66386222 | None:intergenic |
AGGAATATGACTGCATTCTA+TGG | 0.348088 | 3_2:-66381733 | None:intergenic |
AATATGTGGGCTCCACCTAT+TGG | 0.348646 | 3_2:-66384420 | None:intergenic |
AGACATCTTGCAACCCTTCC+AGG | 0.356231 | 3_2:-66387389 | None:intergenic |
CGGGAATATGTGCATCTTCA+TGG | 0.360471 | 3_2:-66382929 | None:intergenic |
AAGGGCTGACAAGCAGAAAA+AGG | 0.360982 | 3_2:+66385550 | Msa0418610:CDS |
GTTTCACTGGCTGAGGTGTC+TGG | 0.361129 | 3_2:-66386934 | None:intergenic |
TATTGTCATGGGATTATCAT+TGG | 0.361840 | 3_2:-66384067 | None:intergenic |
AGGCATTTGCTTGCTATAAA+GGG | 0.366029 | 3_2:-66385450 | None:intergenic |
CAGAGAGCCTAGTATAGATA+TGG | 0.366985 | 3_2:+66387027 | Msa0418610:CDS |
TGCTGCATAGAACCCCTAAA+AGG | 0.368234 | 3_2:+66386756 | Msa0418610:CDS |
AGAATCCCTTATTGCTAAAA+GGG | 0.374579 | 3_2:-66385624 | None:intergenic |
TTCTGAGCTCCTCGTTTCAC+TGG | 0.377100 | 3_2:-66386947 | None:intergenic |
AGCAAGCATGCCGACTATAT+TGG | 0.377154 | 3_2:+66386227 | Msa0418610:CDS |
TACATCACTTTCAGTGCAAT+TGG | 0.379183 | 3_2:-66385970 | None:intergenic |
ACAGATATGCCTTTAAGCTT+TGG | 0.386611 | 3_2:-66382391 | None:intergenic |
AGGTGGTGGAGGAAGAGTTT+TGG | 0.399864 | 3_2:-66381916 | None:intergenic |
ATATGTGGGCTCCACCTATT+GGG | 0.405980 | 3_2:-66384419 | None:intergenic |
AAACCTTCTTGGCCGAGGAC+TGG | 0.407990 | 3_2:-66385850 | None:intergenic |
CGAGTCTCGGGAATGGGGAC+TGG | 0.410037 | 3_2:+66385375 | Msa0418610:CDS |
TCTGTTATATATTATGCATT+CGG | 0.414294 | 3_2:+66385479 | Msa0418610:CDS |
GAGCAGCAACTCCGCCCAAT+AGG | 0.415857 | 3_2:+66384405 | Msa0418610:CDS |
TTGATTTCTGAAGGTGTTAG+AGG | 0.415988 | 3_2:-66381768 | None:intergenic |
CGTCGCTGCTTCTGCTTGTT+CGG | 0.416277 | 3_2:-66386377 | None:intergenic |
CAATCTCTCAATTTCACATC+AGG | 0.418820 | 3_2:-66385689 | None:intergenic |
ATTTCTGTGTGCTTCATAGC+TGG | 0.420808 | 3_2:-66384121 | None:intergenic |
AGGAAGCGAGTCTCGGGAAT+GGG | 0.420824 | 3_2:+66385369 | Msa0418610:CDS |
TGAAATGTCTGATGATCAAC+TGG | 0.421001 | 3_2:+66386631 | Msa0418610:CDS |
ACAGGCAAACCAAAAGGAAA+AGG | 0.421225 | 3_2:+66387131 | Msa0418610:CDS |
GTCTGACACAGTATCCTCTT+TGG | 0.423034 | 3_2:-66386435 | None:intergenic |
TCCTCTGAAGTGCCCCTGGA+AGG | 0.425256 | 3_2:+66387375 | Msa0418610:CDS |
GTCAAGCCTTTGTCATAGTA+AGG | 0.426454 | 3_2:+66381940 | Msa0418610:CDS |
CTGTGCTTCAGCCTCTATCT+TGG | 0.427331 | 3_2:-66385243 | None:intergenic |
TGAGAAAAGTTTACGTGGAT+TGG | 0.430240 | 3_2:+66385661 | Msa0418610:CDS |
TGTTTAATGCGCCTGCTCCT+AGG | 0.430876 | 3_2:-66386686 | None:intergenic |
CTTGATGAAATGAAGATTGT+TGG | 0.431974 | 3_2:+66382286 | Msa0418610:CDS |
TGCAATTTCTGATGACCATA+TGG | 0.433765 | 3_2:+66386256 | Msa0418610:CDS |
ATGATTACATGCAAAATAGA+TGG | 0.434485 | 3_2:+66386015 | Msa0418610:CDS |
CTGATGTGAAATTGAGAGAT+TGG | 0.434513 | 3_2:+66385690 | Msa0418610:CDS |
CATATCTATACTAGGCTCTC+TGG | 0.434737 | 3_2:-66387026 | None:intergenic |
AAAAGTGAGGTTGTAGTGTT+TGG | 0.434931 | 3_2:-66381826 | None:intergenic |
GTTTGGTTTGGTATGATTTG+AGG | 0.435547 | 3_2:-66381809 | None:intergenic |
GTGGTTGTCAGAAGCAGAAA+AGG | 0.442099 | 3_2:+66386282 | Msa0418610:CDS |
TAAAGTTTGGATGTCTAATC+AGG | 0.442290 | 3_2:+66385595 | Msa0418610:CDS |
GTGAAGTGTTATTACAAGAA+TGG | 0.446073 | 3_2:+66382211 | Msa0418610:CDS |
GCAAATGGTGTGGTAAAGTT+TGG | 0.446554 | 3_2:+66385582 | Msa0418610:CDS |
TCAGAGGATTCTTTGGATGT+TGG | 0.450445 | 3_2:+66386173 | Msa0418610:CDS |
ATGATTTGAGGATTATGTTA+CGG | 0.452510 | 3_2:-66381797 | None:intergenic |
TCCTATCAAAGGCATAAAAC+AGG | 0.454935 | 3_2:+66386566 | Msa0418610:CDS |
GTAATTTGAGTCATCATCCT+TGG | 0.455012 | 3_2:+66384148 | Msa0418610:CDS |
ATAAAACAGGTATTTCTAGA+AGG | 0.455035 | 3_2:+66386579 | Msa0418610:CDS |
TGTAATGTCTGACGACCAAT+TGG | 0.458204 | 3_2:+66386538 | Msa0418610:CDS |
GGCTACCCTATCCTTACCTT+TGG | 0.459203 | 3_2:+66382041 | Msa0418610:CDS |
AAAATGTAAAGCCTCTTCTT+GGG | 0.459937 | 3_2:-66383890 | None:intergenic |
AACCTTCTTGGCCGAGGACT+GGG | 0.459997 | 3_2:-66385849 | None:intergenic |
GGGAATATGTGCATCTTCAT+GGG | 0.460186 | 3_2:-66382928 | None:intergenic |
ATCTTTATCAAGTATTGTCA+TGG | 0.463045 | 3_2:-66384079 | None:intergenic |
ACAAATATCTGGTGCAGCAC+CGG | 0.464920 | 3_2:+66387332 | Msa0418610:CDS |
GAAGGTGTTAGAGGGTCAAA+TGG | 0.467066 | 3_2:-66381759 | None:intergenic |
AGTGATATCAGACGACCAAC+TGG | 0.468870 | 3_2:+66386352 | Msa0418610:CDS |
GAGAAACATCTGTCCAGTAC+AGG | 0.470283 | 3_2:+66387285 | Msa0418610:CDS |
CAGGCAAACCAAAAGGAAAA+GGG | 0.476390 | 3_2:+66387132 | Msa0418610:CDS |
TAATTTGAGTCATCATCCTT+GGG | 0.476520 | 3_2:+66384149 | Msa0418610:CDS |
CCTTATGCATGTGCCGAGCC+AGG | 0.478103 | 3_2:+66387466 | Msa0418610:CDS |
AAAGAGAGTCTCAAAAGCTC+AGG | 0.478650 | 3_2:+66387087 | Msa0418610:CDS |
CCTGCATACATATTTGGCTC+GGG | 0.478982 | 3_2:-66382948 | None:intergenic |
GCATTATTGGCTTCAGCGTA+TGG | 0.479451 | 3_2:+66383949 | Msa0418610:CDS |
TCTGACAACCACTCTCCATA+TGG | 0.479877 | 3_2:-66386271 | None:intergenic |
CAAAAGACAGGCAAACCAAA+AGG | 0.480752 | 3_2:+66387125 | Msa0418610:CDS |
TGTTCACCAAAGGTAAGGAT+AGG | 0.481924 | 3_2:-66382047 | None:intergenic |
TGTGCTTCAGCCTCTATCTT+GGG | 0.482658 | 3_2:-66385242 | None:intergenic |
TCCTCTTCCATATCTATACT+AGG | 0.483648 | 3_2:-66387034 | None:intergenic |
CTGAAGTAAAATCAAAAGAC+AGG | 0.484924 | 3_2:+66387113 | Msa0418610:CDS |
GTTGCTGCCTCTGGATTACC+TGG | 0.486133 | 3_2:+66382885 | Msa0418610:CDS |
TGAGGTTGTAGTGTTTGGTT+TGG | 0.487655 | 3_2:-66381821 | None:intergenic |
ACCGTCCTCTGAAGTGCCCC+TGG | 0.487673 | 3_2:+66387371 | Msa0418610:CDS |
CCTCACTATCCAGAGCTGAC+TGG | 0.488465 | 3_2:-66385349 | None:intergenic |
TAATGCAGCCGTCTCATTTG+CGG | 0.492874 | 3_2:+66386984 | Msa0418610:CDS |
TACCTAGCTGCTGGCTCTCT+AGG | 0.494577 | 3_2:-66382821 | None:intergenic |
GAAAAGGATCCAGTCAGCTC+TGG | 0.496531 | 3_2:+66385340 | Msa0418610:CDS |
GATTGAATGAGATGTTTGTC+GGG | 0.497240 | 3_2:-66381870 | None:intergenic |
CTCTTTCTAAGGCGTGTACT+AGG | 0.497241 | 3_2:-66387070 | None:intergenic |
TGATAAACCTTTGGTTCTAT+CGG | 0.497751 | 3_2:-66385524 | None:intergenic |
TGTTAGAAGCAAGCAAGCTA+AGG | 0.501831 | 3_2:+66385872 | Msa0418610:CDS |
TCTAAGATGAAGCCACCGTT+TGG | 0.502594 | 3_2:+66382367 | Msa0418610:CDS |
AGATGTCTTTCAAGTGGGCA+TGG | 0.505702 | 3_2:+66387404 | Msa0418610:CDS |
CCTTTAAGCTTTGGACCAAA+CGG | 0.506349 | 3_2:-66382382 | None:intergenic |
GCCTGCATACATATTTGGCT+CGG | 0.507051 | 3_2:-66382949 | None:intergenic |
AACCAAAGGTTTATCAGAGA+AGG | 0.509771 | 3_2:+66385531 | Msa0418610:CDS |
TTTGTATGCAAGACCATTGG+AGG | 0.509999 | 3_2:+66382243 | Msa0418610:CDS |
CCTGGCTCGGCACATGCATA+AGG | 0.511486 | 3_2:-66387466 | None:intergenic |
TGATCACTTTCAGAAGCAGC+AGG | 0.513069 | 3_2:+66386655 | Msa0418610:CDS |
CGGTTTGTTCACCAAAGGTA+AGG | 0.514359 | 3_2:-66382052 | None:intergenic |
CTCAGATTATCCCAAGATAG+AGG | 0.516424 | 3_2:+66385232 | Msa0418610:intron |
CCCGAGCCAAATATGTATGC+AGG | 0.516655 | 3_2:+66382948 | Msa0418610:CDS |
AAAGAAGGACAGTTAAAGTC+AGG | 0.522037 | 3_2:+66386489 | Msa0418610:CDS |
TGATTGAATGAGATGTTTGT+CGG | 0.522207 | 3_2:-66381871 | None:intergenic |
CATAGCTGGCACTCTCTGAA+AGG | 0.522886 | 3_2:-66384107 | None:intergenic |
CGAACAAGCAGAAGCAGCGA+CGG | 0.523677 | 3_2:+66386378 | Msa0418610:CDS |
GCATGTGCCGAGCCAGGTTG+TGG | 0.524672 | 3_2:+66387472 | Msa0418610:CDS |
AAATGATGTTGCAGCTGCAA+AGG | 0.524881 | 3_2:+66387156 | Msa0418610:CDS |
CCCTTCCAGGGGCACTTCAG+AGG | 0.525481 | 3_2:-66387376 | None:intergenic |
ATCTGTCCAGTACAGGGTTG+CGG | 0.525611 | 3_2:+66387292 | Msa0418610:CDS |
GACATAAGATACCTAGCTGC+TGG | 0.526060 | 3_2:-66382830 | None:intergenic |
GCCTAGTATAGATATGGAAG+AGG | 0.527237 | 3_2:+66387033 | Msa0418610:CDS |
AGAATATCAGTGTGACATTG+AGG | 0.528446 | 3_2:+66387216 | Msa0418610:CDS |
AAAGGAGAATTGCTAAAAGC+TGG | 0.528576 | 3_2:+66386300 | Msa0418610:CDS |
CCTCTGAAGTGCCCCTGGAA+GGG | 0.528920 | 3_2:+66387376 | Msa0418610:CDS |
TCTTTATCAAGTATTGTCAT+GGG | 0.529851 | 3_2:-66384078 | None:intergenic |
ACATAAGAGCATGAGGAGAA+AGG | 0.531215 | 3_2:-66381706 | None:intergenic |
TTTGATAGGAAACCTCCAAT+TGG | 0.531313 | 3_2:-66386553 | None:intergenic |
GATAGTGAGGAAGCGAGTCT+CGG | 0.532216 | 3_2:+66385362 | Msa0418610:CDS |
ACAAACATCTCATTCAATCA+TGG | 0.532245 | 3_2:+66381874 | Msa0418610:CDS |
GGGCTGCATTTGAAAATACA+AGG | 0.532249 | 3_2:+66384211 | Msa0418610:CDS |
CGGACAAGGTTGATTTCTGA+AGG | 0.532937 | 3_2:-66381777 | None:intergenic |
ACAAAGGCTTGACGAGGTGG+TGG | 0.532967 | 3_2:-66381930 | None:intergenic |
ATTACCTCACGGAGTGACCT+TGG | 0.533638 | 3_2:-66382444 | None:intergenic |
AAAAGGTTGTTGCTGGCAAA+TGG | 0.533727 | 3_2:+66385567 | Msa0418610:CDS |
TTGGAACCTTACTATGACAA+AGG | 0.533882 | 3_2:-66381946 | None:intergenic |
CTCCTTGGTGCCATGCCTGT+AGG | 0.534813 | 3_2:-66385312 | None:intergenic |
AGAGAGAGACTCAGTTTCAG+AGG | 0.534848 | 3_2:+66386157 | Msa0418610:CDS |
ATAGTGAGGAAGCGAGTCTC+GGG | 0.535074 | 3_2:+66385363 | Msa0418610:CDS |
TCTGCTTGTTCGGCTCCAGT+TGG | 0.536707 | 3_2:-66386367 | None:intergenic |
CTGGAAGTCTTTCTGTGCAA+CGG | 0.538427 | 3_2:-66386203 | None:intergenic |
TCCTCAAAAGATTGATCCCA+AGG | 0.538519 | 3_2:-66384165 | None:intergenic |
CCCTTATTGCTAAAAGGGGA+TGG | 0.538532 | 3_2:-66385619 | None:intergenic |
TAATATATAACAGAATTGTA+AGG | 0.539019 | 3_2:-66385470 | None:intergenic |
TGTTTGACCACAACCTGGCT+CGG | 0.539843 | 3_2:-66387479 | None:intergenic |
AACCCAGTCCTCGGCCAAGA+AGG | 0.539855 | 3_2:+66385847 | Msa0418610:CDS |
ACCAAAGGTTTATCAGAGAA+GGG | 0.540691 | 3_2:+66385532 | Msa0418610:CDS |
TGATGTGAAATTGAGAGATT+GGG | 0.542109 | 3_2:+66385691 | Msa0418610:CDS |
CTCAGCGTCATTAGTATCAC+GGG | 0.542261 | 3_2:-66384262 | None:intergenic |
GAGGAAGCGAGTCTCGGGAA+TGG | 0.542548 | 3_2:+66385368 | Msa0418610:CDS |
ATAGCTGGCACTCTCTGAAA+GGG | 0.543955 | 3_2:-66384106 | None:intergenic |
CAGCAACTCCGCCCAATAGG+TGG | 0.545927 | 3_2:+66384408 | Msa0418610:CDS |
AATTGGAGGTTTCCTATCAA+AGG | 0.546356 | 3_2:+66386555 | Msa0418610:CDS |
TACGGTAGGTTGGTTTGGAG+AGG | 0.547168 | 3_2:+66382166 | Msa0418610:intron |
ATTGGAGGGTGTGGCAGCTG+TGG | 0.548777 | 3_2:+66382258 | Msa0418610:CDS |
AAGAATATTGCCTACAGGCA+TGG | 0.549016 | 3_2:+66385302 | Msa0418610:CDS |
GAATATCAGTGTGACATTGA+GGG | 0.550459 | 3_2:+66387217 | Msa0418610:CDS |
CTGAATGTTTGACCACAACC+TGG | 0.550627 | 3_2:-66387484 | None:intergenic |
ATATTGCTCTTATGTCATCC+AGG | 0.551709 | 3_2:+66384438 | Msa0418610:CDS |
TCTGAGGAAGATGCAGTTGA+CGG | 0.551931 | 3_2:+66383985 | Msa0418610:CDS |
AGAGGCTGAAGCACAGTTGG+TGG | 0.552173 | 3_2:+66385250 | Msa0418610:CDS |
GCTCCTCGTTTCACTGGCTG+AGG | 0.553863 | 3_2:-66386941 | None:intergenic |
TGCAAGACCATTGGAGGGTG+TGG | 0.554369 | 3_2:+66382249 | Msa0418610:CDS |
AAGGCTTGACGAGGTGGTGG+AGG | 0.554722 | 3_2:-66381927 | None:intergenic |
AGTCGTCATAAGCGAAAGAC+TGG | 0.554927 | 3_2:+66387523 | Msa0418610:CDS |
CTTCGAGTCAAAAGAAGAGT+TGG | 0.555347 | 3_2:+66387252 | Msa0418610:CDS |
GATGTCTTTCAAGTGGGCAT+GGG | 0.555556 | 3_2:+66387405 | Msa0418610:CDS |
CGTGGAAGAATATTGCCTAC+AGG | 0.555811 | 3_2:+66385297 | Msa0418610:CDS |
AGGATTATAAAATCACTTCA+GGG | 0.555818 | 3_2:+66384190 | Msa0418610:CDS |
AAAAGTCTACGATGATTTCG+AGG | 0.556844 | 3_2:-66381977 | None:intergenic |
GCACCAAGGAGGATGAGAAA+AGG | 0.556987 | 3_2:+66385324 | Msa0418610:CDS |
GAATCCCTTATTGCTAAAAG+GGG | 0.557083 | 3_2:-66385623 | None:intergenic |
GCAAGCCAAATGTGTAGCAG+AGG | 0.559692 | 3_2:+66386511 | Msa0418610:CDS |
AGCCAGAAACCTTGCCAAAG+AGG | 0.559819 | 3_2:+66386421 | Msa0418610:CDS |
TCCAGGGGCACTTCAGAGGA+CGG | 0.560776 | 3_2:-66387372 | None:intergenic |
CAATCCCAAATCAGAGGACG+AGG | 0.561283 | 3_2:+66387189 | Msa0418610:CDS |
GATATGGAAGAGGATGAAGA+AGG | 0.562042 | 3_2:+66387043 | Msa0418610:CDS |
CCTCACGGAGTGACCTTGGA+TGG | 0.562981 | 3_2:-66382440 | None:intergenic |
GTTCACCAAAGGTAAGGATA+GGG | 0.566348 | 3_2:-66382046 | None:intergenic |
GATAGAGGCTGAAGCACAGT+TGG | 0.566351 | 3_2:+66385247 | Msa0418610:CDS |
TAAATTTGCTGGCAATGAAG+TGG | 0.567601 | 3_2:+66386058 | Msa0418610:CDS |
TAATTTGTATGCAAGACCAT+TGG | 0.568732 | 3_2:+66382240 | Msa0418610:CDS |
AAGGTGTTAGAGGGTCAAAT+GGG | 0.569528 | 3_2:-66381758 | None:intergenic |
ACACAGTATCCTCTTTGGCA+AGG | 0.570451 | 3_2:-66386430 | None:intergenic |
CTGAAGATAAACCCAGTCCT+CGG | 0.570588 | 3_2:+66385838 | Msa0418610:CDS |
GTTAGAGGGTCAAATGGGTG+AGG | 0.572225 | 3_2:-66381753 | None:intergenic |
GACATCTTGCAACCCTTCCA+GGG | 0.573074 | 3_2:-66387388 | None:intergenic |
GCTAAGGGTGTTGAGAAAGA+TGG | 0.574807 | 3_2:+66385888 | Msa0418610:CDS |
AGAATTGCTAAAAGCTGGCA+AGG | 0.575907 | 3_2:+66386305 | Msa0418610:CDS |
CTAACAAACCTTCTTGGCCG+AGG | 0.578907 | 3_2:-66385855 | None:intergenic |
ATCGTCGCAAGTACCAAAGA+AGG | 0.579741 | 3_2:+66386474 | Msa0418610:CDS |
GGCATTTGCTTGCTATAAAG+GGG | 0.579816 | 3_2:-66385449 | None:intergenic |
TGATTTCTGAAGGTGTTAGA+GGG | 0.580744 | 3_2:-66381767 | None:intergenic |
TGATTCTGACTGTAATCGAA+TGG | 0.582421 | 3_2:+66386103 | Msa0418610:CDS |
GTTAGAAGCAAGCAAGCTAA+GGG | 0.582982 | 3_2:+66385873 | Msa0418610:CDS |
AAGGGATTCTGAAGATGTTG+AGG | 0.583166 | 3_2:+66385637 | Msa0418610:CDS |
AATGTCTGACGACCAATTGG+AGG | 0.583608 | 3_2:+66386541 | Msa0418610:CDS |
TGCATCTTCACCAATATAGT+CGG | 0.585183 | 3_2:-66386237 | None:intergenic |
ACAGCTGCCACACCCTCCAA+TGG | 0.586261 | 3_2:-66382256 | None:intergenic |
AGTATCACGGGAACTATATG+TGG | 0.589203 | 3_2:-66384250 | None:intergenic |
ATTCCAGTGCCAAAAGCTGA+AGG | 0.590477 | 3_2:+66382328 | Msa0418610:CDS |
GGACCTGGTTTCACCATCCA+AGG | 0.591002 | 3_2:+66382427 | Msa0418610:CDS |
ATTTGGGGATTGATTGTACG+TGG | 0.594727 | 3_2:+66385279 | Msa0418610:CDS |
GGGGACTGGACTGTAAAGCT+AGG | 0.595731 | 3_2:+66385389 | Msa0418610:CDS |
TCTCAGCGTCATTAGTATCA+CGG | 0.596892 | 3_2:-66384263 | None:intergenic |
GTTGCAAGATGTCTTTCAAG+TGG | 0.598217 | 3_2:+66387398 | Msa0418610:CDS |
AGAAACATCTGTCCAGTACA+GGG | 0.599754 | 3_2:+66387286 | Msa0418610:CDS |
GCAGTATATTTATTGCTACC+AGG | 0.600218 | 3_2:-66382903 | None:intergenic |
TGAGGATTATGTTACGGACA+AGG | 0.603616 | 3_2:-66381791 | None:intergenic |
TTGCAAGATGTCTTTCAAGT+GGG | 0.608496 | 3_2:+66387399 | Msa0418610:CDS |
AGTTGGTGGCAGAAGATTTG+GGG | 0.609573 | 3_2:+66385264 | Msa0418610:CDS |
GGAAGCGAGTCTCGGGAATG+GGG | 0.610943 | 3_2:+66385370 | Msa0418610:CDS |
AAAGTCTACGATGATTTCGA+GGG | 0.611099 | 3_2:-66381976 | None:intergenic |
CCAGTCAGCTCTGGATAGTG+AGG | 0.614111 | 3_2:+66385349 | Msa0418610:CDS |
ATATCTGTCGGTCAACATGA+TGG | 0.614840 | 3_2:+66382406 | Msa0418610:CDS |
GACGGAGTAATCCTAAAAGT+AGG | 0.614883 | 3_2:+66386396 | Msa0418610:CDS |
AGCTTGCAATCCCAAATCAG+AGG | 0.615064 | 3_2:+66387183 | Msa0418610:CDS |
AAGGAAGAAAGCTAAATGCA+AGG | 0.618993 | 3_2:+66386775 | Msa0418610:CDS |
ACATGCATAAGGTCGTGCAC+CGG | 0.619919 | 3_2:-66387455 | None:intergenic |
TGACCTTGGATGGTGAAACC+AGG | 0.621250 | 3_2:-66382430 | None:intergenic |
TGTTTACTCCGCAAATGAGA+CGG | 0.622409 | 3_2:-66386992 | None:intergenic |
ATCACGGGAACTATATGTGG+TGG | 0.623085 | 3_2:-66384247 | None:intergenic |
GTCGGTCAACATGATGGACC+TGG | 0.624666 | 3_2:+66382412 | Msa0418610:CDS |
TTGTATGCAAGACCATTGGA+GGG | 0.628719 | 3_2:+66382244 | Msa0418610:CDS |
TGGAGCTACATAAGAGCATG+AGG | 0.631559 | 3_2:-66381713 | None:intergenic |
TTAAGCTTTGGACCAAACGG+TGG | 0.635575 | 3_2:-66382379 | None:intergenic |
ATGACAAAGGCTTGACGAGG+TGG | 0.637143 | 3_2:-66381933 | None:intergenic |
AGCCTAGAGAGCCAGCAGCT+AGG | 0.638707 | 3_2:+66382819 | Msa0418610:intron |
AAGCTTAAAGGCATATCTGT+CGG | 0.640352 | 3_2:+66382394 | Msa0418610:CDS |
TGCCTACAGGCATGGCACCA+AGG | 0.644856 | 3_2:+66385310 | Msa0418610:CDS |
ATCTCAACAAAACTCTACGA+AGG | 0.647204 | 3_2:+66382014 | Msa0418610:CDS |
TGCAACGGTTTGTTCACCAA+AGG | 0.647871 | 3_2:-66382057 | None:intergenic |
ACAAAACTCTACGAAGGACA+AGG | 0.648602 | 3_2:+66382020 | Msa0418610:CDS |
ATGACATAAGAGCAATATGT+GGG | 0.650529 | 3_2:-66384433 | None:intergenic |
GGTGTGAACTCGAATATGCT+CGG | 0.651079 | 3_2:-66387434 | None:intergenic |
AAGATGGTGCAGCTTTGCAG+AGG | 0.651138 | 3_2:+66385904 | Msa0418610:CDS |
GGTCATCTTCATGAACTCGC+CGG | 0.653793 | 3_2:-66387351 | None:intergenic |
TGGAAGTTCTTCTGACTCTG+AGG | 0.655083 | 3_2:+66383969 | Msa0418610:CDS |
AAGCTCACCGATAGAACCAA+AGG | 0.655614 | 3_2:+66385517 | Msa0418610:CDS |
GACGACTCTTCATCGCATTG+TGG | 0.657016 | 3_2:-66384342 | None:intergenic |
CCATCCAAGGTCACTCCGTG+AGG | 0.657199 | 3_2:+66382440 | Msa0418610:CDS |
GATGACATAAGAGCAATATG+TGG | 0.659855 | 3_2:-66384434 | None:intergenic |
GCTTGCTATAAAGGGGAGAG+CGG | 0.659886 | 3_2:-66385442 | None:intergenic |
GGAATATGTGCATCTTCATG+GGG | 0.661725 | 3_2:-66382927 | None:intergenic |
TGTGGGCTCCACCTATTGGG+CGG | 0.661848 | 3_2:-66384416 | None:intergenic |
TGAGAAGTCATTGTCAATCG+AGG | 0.663543 | 3_2:+66384281 | Msa0418610:CDS |
GGCTGCATTTGAAAATACAA+GGG | 0.665040 | 3_2:+66384212 | Msa0418610:CDS |
CAAGTAAACAATCCAAACGA+AGG | 0.668074 | 3_2:+66386867 | Msa0418610:CDS |
GCGCATTAAACAGACTGATG+AGG | 0.668737 | 3_2:+66386697 | Msa0418610:CDS |
ATTTCTAGAAGGAAGAACAA+AGG | 0.670421 | 3_2:+66386590 | Msa0418610:CDS |
TCTGATGACCATATGGAGAG+TGG | 0.676767 | 3_2:+66386263 | Msa0418610:CDS |
GGATTATAAAATCACTTCAG+GGG | 0.677804 | 3_2:+66384191 | Msa0418610:CDS |
GATCACTTTCAGAAGCAGCA+GGG | 0.677936 | 3_2:+66386656 | Msa0418610:CDS |
ATGGAAGAGGATGAAGAAGG+CGG | 0.682608 | 3_2:+66387046 | Msa0418610:CDS |
GAGGATGAGAAAAGTTTACG+TGG | 0.686586 | 3_2:+66385656 | Msa0418610:CDS |
GAATGGTAACTGTGATGCAA+CGG | 0.687125 | 3_2:-66382072 | None:intergenic |
ACATCTTGCAACCCTTCCAG+GGG | 0.692419 | 3_2:-66387387 | None:intergenic |
ATTGCTACCAGGTAATCCAG+AGG | 0.698796 | 3_2:-66382892 | None:intergenic |
ACACCTCAGCCAGTGAAACG+AGG | 0.699846 | 3_2:+66386938 | Msa0418610:CDS |
AGTGGTTTCAGATGATGCAG+TGG | 0.706523 | 3_2:+66386076 | Msa0418610:CDS |
ACTATGACAAAGGCTTGACG+AGG | 0.716443 | 3_2:-66381936 | None:intergenic |
GTTGTTGCTGGCAAATGGTG+TGG | 0.725282 | 3_2:+66385572 | Msa0418610:CDS |
ATCCTACGTAGTGAAAAGTG+AGG | 0.731935 | 3_2:-66381839 | None:intergenic |
CTACAGGCATGGCACCAAGG+AGG | 0.732746 | 3_2:+66385313 | Msa0418610:CDS |
GAGCATATTCGAGTTCACAC+CGG | 0.734529 | 3_2:+66387436 | Msa0418610:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTATCATATTTTATCAAAAT+TGG | + | chr3_2:66383002-66383021 | Msa0418610:intron | 15.0% |
!!! | ATTTTATCAAAATTGGTTTA+TGG | + | chr3_2:66383009-66383028 | Msa0418610:intron | 15.0% |
!!! | TTTTATCAAAATTGGTTTAT+GGG | + | chr3_2:66383010-66383029 | Msa0418610:intron | 15.0% |
!!! | AAAACATTTTTATGATTTAC+AGG | - | chr3_2:66384315-66384334 | None:intergenic | 15.0% |
!!! | AAATCATAAAAATGTTTTAC+TGG | + | chr3_2:66384317-66384336 | Msa0418610:CDS | 15.0% |
!!! | TATGATTTTTATTTATGTGA+TGG | + | chr3_2:66384929-66384948 | Msa0418610:intron | 15.0% |
!! | TAATATATAACAGAATTGTA+AGG | - | chr3_2:66385473-66385492 | None:intergenic | 15.0% |
!! | ATATTTAAATTAGCGACTAA+TGG | + | chr3_2:66382536-66382555 | Msa0418610:intron | 20.0% |
!! | ATGTCTTCAGTTTATTTATT+TGG | + | chr3_2:66383102-66383121 | Msa0418610:intron | 20.0% |
!! | GATGCAAATAAAAAATATCT+TGG | - | chr3_2:66383287-66383306 | None:intergenic | 20.0% |
!!! | CTTTTTAAATACTTCCTTTT+GGG | + | chr3_2:66383351-66383370 | Msa0418610:intron | 20.0% |
!! | AAAGAAAAAAGAAAGACAAA+TGG | - | chr3_2:66384662-66384681 | None:intergenic | 20.0% |
!! | CAAAAGAAATTGATTAGATA+AGG | - | chr3_2:66384755-66384774 | None:intergenic | 20.0% |
!!! | TAATCAATTTCTTTTGAGTA+AGG | + | chr3_2:66384759-66384778 | Msa0418610:intron | 20.0% |
!! | CTTGAAAAAAGGTAAAAAAA+AGG | - | chr3_2:66384885-66384904 | None:intergenic | 20.0% |
!! | TCTGTTATATATTATGCATT+CGG | + | chr3_2:66385479-66385498 | Msa0418610:CDS | 20.0% |
!!! | ATATGTTTTCTATGATGATA+TGG | - | chr3_2:66385939-66385958 | None:intergenic | 20.0% |
!!! | TATGATTTTAGATAACGAAA+TGG | + | chr3_2:66386808-66386827 | Msa0418610:CDS | 20.0% |
! | ATGATTTGAGGATTATGTTA+CGG | - | chr3_2:66381800-66381819 | None:intergenic | 25.0% |
! | TTCTTCAACGAATGTTTAAA+CGG | - | chr3_2:66382107-66382126 | None:intergenic | 25.0% |
! | TTAACAAAACTATTACCTCA+CGG | - | chr3_2:66382458-66382477 | None:intergenic | 25.0% |
!!! | ATTGCAGCTTCTTTTTTAAT+GGG | + | chr3_2:66382858-66382877 | Msa0418610:CDS | 25.0% |
!!! | AATGACTACACATTGTTTTT+TGG | + | chr3_2:66383053-66383072 | Msa0418610:intron | 25.0% |
! | ACAATTCAGGTATTACATAT+AGG | - | chr3_2:66383135-66383154 | None:intergenic | 25.0% |
! | TTTAAAAAGGAATAGGAAGA+AGG | - | chr3_2:66383340-66383359 | None:intergenic | 25.0% |
!!! | GGAAGTATTTAAAAAGGAAT+AGG | - | chr3_2:66383347-66383366 | None:intergenic | 25.0% |
!!! | CCAAAAGGAAGTATTTAAAA+AGG | - | chr3_2:66383353-66383372 | None:intergenic | 25.0% |
!! | CCTTTTTAAATACTTCCTTT+TGG | + | chr3_2:66383350-66383369 | Msa0418610:intron | 25.0% |
! | ATAACTAGGTTATGTACAAT+TGG | - | chr3_2:66383382-66383401 | None:intergenic | 25.0% |
!! | CTTTTCTCTTATTATGCATT+TGG | + | chr3_2:66383418-66383437 | Msa0418610:intron | 25.0% |
! | ATTATGCATTTGGACTTATA+TGG | + | chr3_2:66383428-66383447 | Msa0418610:intron | 25.0% |
! | TTATGCATTTGGACTTATAT+GGG | + | chr3_2:66383429-66383448 | Msa0418610:intron | 25.0% |
! | TACATATGAAAACACAACTT+AGG | + | chr3_2:66383713-66383732 | Msa0418610:intron | 25.0% |
!!! | AATATGATGTAAAAGGCATT+TGG | - | chr3_2:66383750-66383769 | None:intergenic | 25.0% |
!!! | TCTATTTTGTTTTGTAACAC+AGG | + | chr3_2:66383850-66383869 | Msa0418610:intron | 25.0% |
!!! | CTATTTTGTTTTGTAACACA+GGG | + | chr3_2:66383851-66383870 | Msa0418610:intron | 25.0% |
!!! | TTACATTTTGAAGGAGAAAA+TGG | + | chr3_2:66383904-66383923 | Msa0418610:CDS | 25.0% |
! | AGTTTATTGCATTTGATTCA+TGG | - | chr3_2:66384011-66384030 | None:intergenic | 25.0% |
! | TTGGAATCACAAAAATTAGA+AGG | - | chr3_2:66384051-66384070 | None:intergenic | 25.0% |
!! | TCTTTATCAAGTATTGTCAT+GGG | - | chr3_2:66384081-66384100 | None:intergenic | 25.0% |
!! | ATCTTTATCAAGTATTGTCA+TGG | - | chr3_2:66384082-66384101 | None:intergenic | 25.0% |
! | AGGATTATAAAATCACTTCA+GGG | + | chr3_2:66384190-66384209 | Msa0418610:CDS | 25.0% |
! | TTTACTAGAAGTGAAAAAAG+CGG | - | chr3_2:66384524-66384543 | None:intergenic | 25.0% |
! | ATTTCAACTCTTCTGTAAAT+AGG | + | chr3_2:66384546-66384565 | Msa0418610:intron | 25.0% |
!! | CAAGATCCATGATTTTTATA+GGG | - | chr3_2:66384830-66384849 | None:intergenic | 25.0% |
!! | ACAAGATCCATGATTTTTAT+AGG | - | chr3_2:66384831-66384850 | None:intergenic | 25.0% |
! | TACTAACTAGAATGTCTAAA+AGG | + | chr3_2:66385002-66385021 | Msa0418610:intron | 25.0% |
! | TAACTTTATCTTCATCTCAT+AGG | + | chr3_2:66385117-66385136 | Msa0418610:intron | 25.0% |
! | AACTTTATCTTCATCTCATA+GGG | + | chr3_2:66385118-66385137 | Msa0418610:intron | 25.0% |
!!! | TAGTTGCTTTTACAGTTTAT+TGG | + | chr3_2:66385170-66385189 | Msa0418610:intron | 25.0% |
! | ATGATTACATGCAAAATAGA+TGG | + | chr3_2:66386015-66386034 | Msa0418610:CDS | 25.0% |
!!! | ATAAAACAGGTATTTCTAGA+AGG | + | chr3_2:66386579-66386598 | Msa0418610:CDS | 25.0% |
!!! | ATTTAGCTTTCTTCCTTTTA+GGG | - | chr3_2:66386772-66386791 | None:intergenic | 25.0% |
TGATTGAATGAGATGTTTGT+CGG | - | chr3_2:66381874-66381893 | None:intergenic | 30.0% | |
ACAAACATCTCATTCAATCA+TGG | + | chr3_2:66381874-66381893 | Msa0418610:CDS | 30.0% | |
!!! | GTAGAGTTTTGTTGAGATTA+TGG | - | chr3_2:66382012-66382031 | None:intergenic | 30.0% |
!!! | TGTTATATGTGCTGCTTTTA+CGG | + | chr3_2:66382148-66382167 | Msa0418610:intron | 30.0% |
! | GTGAAGTGTTATTACAAGAA+TGG | + | chr3_2:66382211-66382230 | Msa0418610:CDS | 30.0% |
! | TAATTTGTATGCAAGACCAT+TGG | + | chr3_2:66382240-66382259 | Msa0418610:CDS | 30.0% |
CTTGATGAAATGAAGATTGT+TGG | + | chr3_2:66382286-66382305 | Msa0418610:CDS | 30.0% | |
GAAAATTGTGAGGATGAAAT+TGG | - | chr3_2:66382496-66382515 | None:intergenic | 30.0% | |
!!! | GATTGCAGCTTCTTTTTTAA+TGG | + | chr3_2:66382857-66382876 | Msa0418610:CDS | 30.0% |
!!! | AGCTTCTTTTTTAATGGGTT+GGG | + | chr3_2:66382863-66382882 | Msa0418610:CDS | 30.0% |
TCCTAATGAACATATGAAAC+AGG | - | chr3_2:66383079-66383098 | None:intergenic | 30.0% | |
TATGTAATACCTGAATTGTG+TGG | + | chr3_2:66383136-66383155 | Msa0418610:intron | 30.0% | |
ACATAACCTAGTTATGCATT+TGG | + | chr3_2:66383387-66383406 | Msa0418610:intron | 30.0% | |
TATGCATTTGGACTTATATG+GGG | + | chr3_2:66383430-66383449 | Msa0418610:intron | 30.0% | |
!!! | AAGGTTGGTTTGTTTTCTTT+CGG | + | chr3_2:66383457-66383476 | Msa0418610:intron | 30.0% |
AATGTTCAAATCCTAAACTC+CGG | + | chr3_2:66383519-66383538 | Msa0418610:intron | 30.0% | |
! | AAGATAATCTTCTAGTCTTC+CGG | - | chr3_2:66383541-66383560 | None:intergenic | 30.0% |
TAGCGTATCATTATGACATT+TGG | - | chr3_2:66383639-66383658 | None:intergenic | 30.0% | |
AAATGTCATAATGATACGCT+AGG | + | chr3_2:66383638-66383657 | Msa0418610:intron | 30.0% | |
! | GTTTTCATATGTACACCAAA+GGG | - | chr3_2:66383706-66383725 | None:intergenic | 30.0% |
! | TGTTTTCATATGTACACCAA+AGG | - | chr3_2:66383707-66383726 | None:intergenic | 30.0% |
GATGGCAAATATGATGTAAA+AGG | - | chr3_2:66383757-66383776 | None:intergenic | 30.0% | |
!!! | TATTTAGCTCTGATTTTCCT+TGG | + | chr3_2:66383803-66383822 | Msa0418610:intron | 30.0% |
AAAATGTAAAGCCTCTTCTT+GGG | - | chr3_2:66383893-66383912 | None:intergenic | 30.0% | |
TATTGTCATGGGATTATCAT+TGG | - | chr3_2:66384070-66384089 | None:intergenic | 30.0% | |
TAATTTGAGTCATCATCCTT+GGG | + | chr3_2:66384149-66384168 | Msa0418610:CDS | 30.0% | |
CAGGATTATAAAATCACTTC+AGG | + | chr3_2:66384189-66384208 | Msa0418610:CDS | 30.0% | |
GGATTATAAAATCACTTCAG+GGG | + | chr3_2:66384191-66384210 | Msa0418610:CDS | 30.0% | |
ATGACATAAGAGCAATATGT+GGG | - | chr3_2:66384436-66384455 | None:intergenic | 30.0% | |
GAAAAAAGAAAGACAAATGG+AGG | - | chr3_2:66384659-66384678 | None:intergenic | 30.0% | |
GAGTAAGGATCAATCTAAAA+TGG | + | chr3_2:66384774-66384793 | Msa0418610:intron | 30.0% | |
!!! | TTATTTTAACCAGTGTCCTA+AGG | + | chr3_2:66384803-66384822 | Msa0418610:intron | 30.0% |
! | ATGATTTTTATAGGGTCCTT+AGG | - | chr3_2:66384822-66384841 | None:intergenic | 30.0% |
TAAGGACCCTATAAAAATCA+TGG | + | chr3_2:66384821-66384840 | Msa0418610:intron | 30.0% | |
!! | ATTTATGTGATGGACAATGT+AGG | + | chr3_2:66384939-66384958 | Msa0418610:intron | 30.0% |
!! | GTATTTTTCAGTTAGTTTCG+TGG | + | chr3_2:66385049-66385068 | Msa0418610:intron | 30.0% |
AAAGTTAATCAGTAGCAAAG+AGG | - | chr3_2:66385104-66385123 | None:intergenic | 30.0% | |
! | GCAATGAATGATTTGCAAAA+AGG | - | chr3_2:66385200-66385219 | None:intergenic | 30.0% |
!! | TGATAAACCTTTGGTTCTAT+CGG | - | chr3_2:66385527-66385546 | None:intergenic | 30.0% |
TAAAGTTTGGATGTCTAATC+AGG | + | chr3_2:66385595-66385614 | Msa0418610:CDS | 30.0% | |
AGAATCCCTTATTGCTAAAA+GGG | - | chr3_2:66385627-66385646 | None:intergenic | 30.0% | |
TGATGTGAAATTGAGAGATT+GGG | + | chr3_2:66385691-66385710 | Msa0418610:CDS | 30.0% | |
!! | GGAAAGGAATTTTGATGATA+AGG | + | chr3_2:66385794-66385813 | Msa0418610:intron | 30.0% |
!! | GAATTTTGATGATAAGGATG+TGG | + | chr3_2:66385800-66385819 | Msa0418610:CDS | 30.0% |
GTCAAAAAAGCTAAATTTGC+TGG | + | chr3_2:66386047-66386066 | Msa0418610:CDS | 30.0% | |
! | ATTTCTAGAAGGAAGAACAA+AGG | + | chr3_2:66386590-66386609 | Msa0418610:CDS | 30.0% |
!!! | TTTAGCTTTCTTCCTTTTAG+GGG | - | chr3_2:66386771-66386790 | None:intergenic | 30.0% |
!!! | CATTTAGCTTTCTTCCTTTT+AGG | - | chr3_2:66386773-66386792 | None:intergenic | 30.0% |
! | GTTTTTCATTTGGAGAGTTT+TGG | - | chr3_2:66386915-66386934 | None:intergenic | 30.0% |
CTGAAGTAAAATCAAAAGAC+AGG | + | chr3_2:66387113-66387132 | Msa0418610:CDS | 30.0% | |
AGGAATATGACTGCATTCTA+TGG | - | chr3_2:66381736-66381755 | None:intergenic | 35.0% | |
!! | TGATTTCTGAAGGTGTTAGA+GGG | - | chr3_2:66381770-66381789 | None:intergenic | 35.0% |
!! | TTGATTTCTGAAGGTGTTAG+AGG | - | chr3_2:66381771-66381790 | None:intergenic | 35.0% |
!! | GTTTGGTTTGGTATGATTTG+AGG | - | chr3_2:66381812-66381831 | None:intergenic | 35.0% |
AAAAGTGAGGTTGTAGTGTT+TGG | - | chr3_2:66381829-66381848 | None:intergenic | 35.0% | |
GATTGAATGAGATGTTTGTC+GGG | - | chr3_2:66381873-66381892 | None:intergenic | 35.0% | |
!!! | AAGAGTTTTGGTTTTGGTGT+TGG | - | chr3_2:66381907-66381926 | None:intergenic | 35.0% |
TTGGAACCTTACTATGACAA+AGG | - | chr3_2:66381949-66381968 | None:intergenic | 35.0% | |
! | TGATTTCGAGGGATTGTTTT+TGG | - | chr3_2:66381968-66381987 | None:intergenic | 35.0% |
AAAGTCTACGATGATTTCGA+GGG | - | chr3_2:66381979-66381998 | None:intergenic | 35.0% | |
AAAAGTCTACGATGATTTCG+AGG | - | chr3_2:66381980-66381999 | None:intergenic | 35.0% | |
ATCTCAACAAAACTCTACGA+AGG | + | chr3_2:66382014-66382033 | Msa0418610:CDS | 35.0% | |
TTAAACGGTTCATAGGTGAA+TGG | - | chr3_2:66382092-66382111 | None:intergenic | 35.0% | |
CGAATGTTTAAACGGTTCAT+AGG | - | chr3_2:66382099-66382118 | None:intergenic | 35.0% | |
ACAGATATGCCTTTAAGCTT+TGG | - | chr3_2:66382394-66382413 | None:intergenic | 35.0% | |
! | AAGCTTAAAGGCATATCTGT+CGG | + | chr3_2:66382394-66382413 | Msa0418610:CDS | 35.0% |
TGTGATGCAAGAAAATTGTG+AGG | - | chr3_2:66382506-66382525 | None:intergenic | 35.0% | |
!!! | CAGCTTCTTTTTTAATGGGT+TGG | + | chr3_2:66382862-66382881 | Msa0418610:CDS | 35.0% |
GCAGTATATTTATTGCTACC+AGG | - | chr3_2:66382906-66382925 | None:intergenic | 35.0% | |
AACTTGCCTGCATACATATT+TGG | - | chr3_2:66382957-66382976 | None:intergenic | 35.0% | |
GCCTGTTTCATATGTTCATT+AGG | + | chr3_2:66383075-66383094 | Msa0418610:intron | 35.0% | |
AGGAAAAAATCAGGACAGAT+TGG | - | chr3_2:66383162-66383181 | None:intergenic | 35.0% | |
CTCTACAGTAGGAAAAAATC+AGG | - | chr3_2:66383171-66383190 | None:intergenic | 35.0% | |
ATCTTGGCAACAAACAAAGA+GGG | - | chr3_2:66383271-66383290 | None:intergenic | 35.0% | |
TATCTTGGCAACAAACAAAG+AGG | - | chr3_2:66383272-66383291 | None:intergenic | 35.0% | |
!! | TACAATTGGTTTGTCCCAAA+AGG | - | chr3_2:66383368-66383387 | None:intergenic | 35.0% |
TAACGTCCAAATGCATAACT+AGG | - | chr3_2:66383396-66383415 | None:intergenic | 35.0% | |
!!! | AGGTTGGTTTGTTTTCTTTC+GGG | + | chr3_2:66383458-66383477 | Msa0418610:intron | 35.0% |
AATTAACTCAACCATCTCAG+GGG | - | chr3_2:66383493-66383512 | None:intergenic | 35.0% | |
CAATTAACTCAACCATCTCA+GGG | - | chr3_2:66383494-66383513 | None:intergenic | 35.0% | |
! | GATTATCTTGCCTTTTGTGA+TGG | + | chr3_2:66383552-66383571 | Msa0418610:intron | 35.0% |
!! | TGAAGAAGATTTGAGTTGTC+CGG | + | chr3_2:66383576-66383595 | Msa0418610:intron | 35.0% |
!! | TGATACGCTAGGATTTTAGT+TGG | + | chr3_2:66383649-66383668 | Msa0418610:intron | 35.0% |
!!! | GATACGCTAGGATTTTAGTT+GGG | + | chr3_2:66383650-66383669 | Msa0418610:intron | 35.0% |
AGTTGGGATAATAGTAGAAC+AGG | + | chr3_2:66383666-66383685 | Msa0418610:intron | 35.0% | |
!! | TGTCAAACTTTTGAGAGAGA+TGG | - | chr3_2:66383775-66383794 | None:intergenic | 35.0% |
!!! | TTTTGTTTTGTAACACAGGG+TGG | + | chr3_2:66383854-66383873 | Msa0418610:intron | 35.0% |
AAAGAAAAATGCCCAAGAAG+AGG | + | chr3_2:66383879-66383898 | Msa0418610:CDS | 35.0% | |
CAAAATGTAAAGCCTCTTCT+TGG | - | chr3_2:66383894-66383913 | None:intergenic | 35.0% | |
! | GAAGAGGCTTTACATTTTGA+AGG | + | chr3_2:66383895-66383914 | Msa0418610:CDS | 35.0% |
GTAATTTGAGTCATCATCCT+TGG | + | chr3_2:66384148-66384167 | Msa0418610:CDS | 35.0% | |
GGCTGCATTTGAAAATACAA+GGG | + | chr3_2:66384212-66384231 | Msa0418610:CDS | 35.0% | |
! | GAACTATATGTGGTGGAATA+AGG | - | chr3_2:66384243-66384262 | None:intergenic | 35.0% |
GATGACATAAGAGCAATATG+TGG | - | chr3_2:66384437-66384456 | None:intergenic | 35.0% | |
ATATTGCTCTTATGTCATCC+AGG | + | chr3_2:66384438-66384457 | Msa0418610:CDS | 35.0% | |
AAAAAAGCGGCAAAAAGCAA+AGG | - | chr3_2:66384511-66384530 | None:intergenic | 35.0% | |
TCAACTCTTCTGTAAATAGG+TGG | + | chr3_2:66384549-66384568 | Msa0418610:intron | 35.0% | |
GGCATCATATGATTCAATGA+CGG | + | chr3_2:66384570-66384589 | Msa0418610:intron | 35.0% | |
TTTCGTGGCTCAATAATAGT+TGG | + | chr3_2:66385064-66385083 | Msa0418610:intron | 35.0% | |
!! | AGGCATTTGCTTGCTATAAA+GGG | - | chr3_2:66385453-66385472 | None:intergenic | 35.0% |
!! | AAGGCATTTGCTTGCTATAA+AGG | - | chr3_2:66385454-66385473 | None:intergenic | 35.0% |
AACCAAAGGTTTATCAGAGA+AGG | + | chr3_2:66385531-66385550 | Msa0418610:CDS | 35.0% | |
ACCAAAGGTTTATCAGAGAA+GGG | + | chr3_2:66385532-66385551 | Msa0418610:CDS | 35.0% | |
GAATCCCTTATTGCTAAAAG+GGG | - | chr3_2:66385626-66385645 | None:intergenic | 35.0% | |
CAGAATCCCTTATTGCTAAA+AGG | - | chr3_2:66385628-66385647 | None:intergenic | 35.0% | |
TGAGAAAAGTTTACGTGGAT+TGG | + | chr3_2:66385661-66385680 | Msa0418610:CDS | 35.0% | |
CAATCTCTCAATTTCACATC+AGG | - | chr3_2:66385692-66385711 | None:intergenic | 35.0% | |
CTGATGTGAAATTGAGAGAT+TGG | + | chr3_2:66385690-66385709 | Msa0418610:CDS | 35.0% | |
! | TGATGATAAGGATGTGGTTT+TGG | + | chr3_2:66385806-66385825 | Msa0418610:CDS | 35.0% |
TTGCTTCTAACAAACCTTCT+TGG | - | chr3_2:66385864-66385883 | None:intergenic | 35.0% | |
TACATCACTTTCAGTGCAAT+TGG | - | chr3_2:66385973-66385992 | None:intergenic | 35.0% | |
!! | TAAATTTGCTGGCAATGAAG+TGG | + | chr3_2:66386058-66386077 | Msa0418610:CDS | 35.0% |
TGATTCTGACTGTAATCGAA+TGG | + | chr3_2:66386103-66386122 | Msa0418610:CDS | 35.0% | |
TGCATCTTCACCAATATAGT+CGG | - | chr3_2:66386240-66386259 | None:intergenic | 35.0% | |
TGCAATTTCTGATGACCATA+TGG | + | chr3_2:66386256-66386275 | Msa0418610:CDS | 35.0% | |
AAAGGAGAATTGCTAAAAGC+TGG | + | chr3_2:66386300-66386319 | Msa0418610:CDS | 35.0% | |
!!! | TCACTGAATCTTTTTCAGCA+AGG | - | chr3_2:66386337-66386356 | None:intergenic | 35.0% |
!!! | TTTCTGGCTTTCCTACTTTT+AGG | - | chr3_2:66386410-66386429 | None:intergenic | 35.0% |
TGACTTTAACTGTCCTTCTT+TGG | - | chr3_2:66386490-66386509 | None:intergenic | 35.0% | |
AAAGAAGGACAGTTAAAGTC+AGG | + | chr3_2:66386489-66386508 | Msa0418610:CDS | 35.0% | |
TTTGATAGGAAACCTCCAAT+TGG | - | chr3_2:66386556-66386575 | None:intergenic | 35.0% | |
AATTGGAGGTTTCCTATCAA+AGG | + | chr3_2:66386555-66386574 | Msa0418610:CDS | 35.0% | |
! | TCCTATCAAAGGCATAAAAC+AGG | + | chr3_2:66386566-66386585 | Msa0418610:CDS | 35.0% |
! | ACCTGTTTTATGCCTTTGAT+AGG | - | chr3_2:66386570-66386589 | None:intergenic | 35.0% |
TGAAATGTCTGATGATCAAC+TGG | + | chr3_2:66386631-66386650 | Msa0418610:CDS | 35.0% | |
AAGGAAGAAAGCTAAATGCA+AGG | + | chr3_2:66386775-66386794 | Msa0418610:CDS | 35.0% | |
CTTCGTTTGGATTGTTTACT+TGG | - | chr3_2:66386869-66386888 | None:intergenic | 35.0% | |
CAAGTAAACAATCCAAACGA+AGG | + | chr3_2:66386867-66386886 | Msa0418610:CDS | 35.0% | |
TCCTCTTCCATATCTATACT+AGG | - | chr3_2:66387037-66387056 | None:intergenic | 35.0% | |
!!! | CTTTTGAGACTCTCTTTCTA+AGG | - | chr3_2:66387084-66387103 | None:intergenic | 35.0% |
! | ATCATTTGCCCTTTTCCTTT+TGG | - | chr3_2:66387143-66387162 | None:intergenic | 35.0% |
AGAATATCAGTGTGACATTG+AGG | + | chr3_2:66387216-66387235 | Msa0418610:CDS | 35.0% | |
GAATATCAGTGTGACATTGA+GGG | + | chr3_2:66387217-66387236 | Msa0418610:CDS | 35.0% | |
! | GTTTTTCTCGCACAAATATC+TGG | + | chr3_2:66387321-66387340 | Msa0418610:CDS | 35.0% |
! | TTGCAAGATGTCTTTCAAGT+GGG | + | chr3_2:66387399-66387418 | Msa0418610:CDS | 35.0% |
! | ACATAAGAGCATGAGGAGAA+AGG | - | chr3_2:66381709-66381728 | None:intergenic | 40.0% |
! | AAGGTGTTAGAGGGTCAAAT+GGG | - | chr3_2:66381761-66381780 | None:intergenic | 40.0% |
TGAGGATTATGTTACGGACA+AGG | - | chr3_2:66381794-66381813 | None:intergenic | 40.0% | |
TGAGGTTGTAGTGTTTGGTT+TGG | - | chr3_2:66381824-66381843 | None:intergenic | 40.0% | |
!! | AACCTCACTTTTCACTACGT+AGG | + | chr3_2:66381837-66381856 | Msa0418610:CDS | 40.0% |
ATCCTACGTAGTGAAAAGTG+AGG | - | chr3_2:66381842-66381861 | None:intergenic | 40.0% | |
!!! | AGTTTTGGTTTTGGTGTTGG+AGG | - | chr3_2:66381904-66381923 | None:intergenic | 40.0% |
!!! | TGGAGGAAGAGTTTTGGTTT+TGG | - | chr3_2:66381913-66381932 | None:intergenic | 40.0% |
GTCAAGCCTTTGTCATAGTA+AGG | + | chr3_2:66381940-66381959 | Msa0418610:CDS | 40.0% | |
ACAAAACTCTACGAAGGACA+AGG | + | chr3_2:66382020-66382039 | Msa0418610:CDS | 40.0% | |
GTTCACCAAAGGTAAGGATA+GGG | - | chr3_2:66382049-66382068 | None:intergenic | 40.0% | |
TGTTCACCAAAGGTAAGGAT+AGG | - | chr3_2:66382050-66382069 | None:intergenic | 40.0% | |
GAATGGTAACTGTGATGCAA+CGG | - | chr3_2:66382075-66382094 | None:intergenic | 40.0% | |
!!! | ATATGTGCTGCTTTTACGGT+AGG | + | chr3_2:66382152-66382171 | Msa0418610:intron | 40.0% |
TTTGTATGCAAGACCATTGG+AGG | + | chr3_2:66382243-66382262 | Msa0418610:CDS | 40.0% | |
TTGTATGCAAGACCATTGGA+GGG | + | chr3_2:66382244-66382263 | Msa0418610:CDS | 40.0% | |
! | TACTCAGTTCCTTCAGCTTT+TGG | - | chr3_2:66382340-66382359 | None:intergenic | 40.0% |
!! | CCTTTAAGCTTTGGACCAAA+CGG | - | chr3_2:66382385-66382404 | None:intergenic | 40.0% |
ATATCTGTCGGTCAACATGA+TGG | + | chr3_2:66382406-66382425 | Msa0418610:CDS | 40.0% | |
! | AGTGAAAGTGAGACTAGTCA+AGG | + | chr3_2:66382719-66382738 | Msa0418610:intron | 40.0% |
GGAATATGTGCATCTTCATG+GGG | - | chr3_2:66382930-66382949 | None:intergenic | 40.0% | |
GGGAATATGTGCATCTTCAT+GGG | - | chr3_2:66382931-66382950 | None:intergenic | 40.0% | |
TGAACTTAGGCTATCCTGTT+TGG | + | chr3_2:66383242-66383261 | Msa0418610:intron | 40.0% | |
TCTTGGCAACAAACAAAGAG+GGG | - | chr3_2:66383270-66383289 | None:intergenic | 40.0% | |
AAGGAATAGGAAGAAGGAGA+AGG | - | chr3_2:66383334-66383353 | None:intergenic | 40.0% | |
ATTAACTCAACCATCTCAGG+GGG | - | chr3_2:66383492-66383511 | None:intergenic | 40.0% | |
CCAATTAACTCAACCATCTC+AGG | - | chr3_2:66383495-66383514 | None:intergenic | 40.0% | |
CCTGAGATGGTTGAGTTAAT+TGG | + | chr3_2:66383492-66383511 | Msa0418610:intron | 40.0% | |
TCTTCTTCAGCCATCACAAA+AGG | - | chr3_2:66383565-66383584 | None:intergenic | 40.0% | |
TGACCAGTTCATGACACTTA+TGG | - | chr3_2:66383602-66383621 | None:intergenic | 40.0% | |
! | ATATGTACACCAAAGGGCAT+TGG | - | chr3_2:66383700-66383719 | None:intergenic | 40.0% |
AGCTACAGCTCTTGCATTAT+TGG | + | chr3_2:66383936-66383955 | Msa0418610:CDS | 40.0% | |
ATTTCTGTGTGCTTCATAGC+TGG | - | chr3_2:66384124-66384143 | None:intergenic | 40.0% | |
! | TCCTTGGGATCAATCTTTTG+AGG | + | chr3_2:66384164-66384183 | Msa0418610:CDS | 40.0% |
TCCTCAAAAGATTGATCCCA+AGG | - | chr3_2:66384168-66384187 | None:intergenic | 40.0% | |
!! | GGATCAATCTTTTGAGGAAC+AGG | + | chr3_2:66384170-66384189 | Msa0418610:CDS | 40.0% |
GGGCTGCATTTGAAAATACA+AGG | + | chr3_2:66384211-66384230 | Msa0418610:CDS | 40.0% | |
AGTATCACGGGAACTATATG+TGG | - | chr3_2:66384253-66384272 | None:intergenic | 40.0% | |
TCTCAGCGTCATTAGTATCA+CGG | - | chr3_2:66384266-66384285 | None:intergenic | 40.0% | |
TGAGAAGTCATTGTCAATCG+AGG | + | chr3_2:66384281-66384300 | Msa0418610:CDS | 40.0% | |
CTATATCATTCTATGCGACG+AGG | - | chr3_2:66384701-66384720 | None:intergenic | 40.0% | |
AAGGTCTGCGACTTGAAAAA+AGG | - | chr3_2:66384896-66384915 | None:intergenic | 40.0% | |
ATCATACAAAGCCTCTGCAA+AGG | - | chr3_2:66384915-66384934 | None:intergenic | 40.0% | |
ATAGCTAAAAAAGTTCCCCG+AGG | - | chr3_2:66384973-66384992 | None:intergenic | 40.0% | |
ATCTTCATCTCATAGGGTTG+AGG | + | chr3_2:66385124-66385143 | Msa0418610:intron | 40.0% | |
CTCAGATTATCCCAAGATAG+AGG | + | chr3_2:66385232-66385251 | Msa0418610:intron | 40.0% | |
ATTTGGGGATTGATTGTACG+TGG | + | chr3_2:66385279-66385298 | Msa0418610:CDS | 40.0% | |
AAGAATATTGCCTACAGGCA+TGG | + | chr3_2:66385302-66385321 | Msa0418610:CDS | 40.0% | |
!! | GGCATTTGCTTGCTATAAAG+GGG | - | chr3_2:66385452-66385471 | None:intergenic | 40.0% |
AAGCAGAAAAAGGTTGTTGC+TGG | + | chr3_2:66385560-66385579 | Msa0418610:CDS | 40.0% | |
AAAAGGTTGTTGCTGGCAAA+TGG | + | chr3_2:66385567-66385586 | Msa0418610:CDS | 40.0% | |
GCAAATGGTGTGGTAAAGTT+TGG | + | chr3_2:66385582-66385601 | Msa0418610:CDS | 40.0% | |
! | TCCATCCCCTTTTAGCAATA+AGG | + | chr3_2:66385618-66385637 | Msa0418610:CDS | 40.0% |
! | CCATCCCCTTTTAGCAATAA+GGG | + | chr3_2:66385619-66385638 | Msa0418610:CDS | 40.0% |
! | AAGGGATTCTGAAGATGTTG+AGG | + | chr3_2:66385637-66385656 | Msa0418610:CDS | 40.0% |
GAGGATGAGAAAAGTTTACG+TGG | + | chr3_2:66385656-66385675 | Msa0418610:CDS | 40.0% | |
TCTCAAAATCAGGCAGGAAA+AGG | + | chr3_2:66385740-66385759 | Msa0418610:intron | 40.0% | |
AAACAACCTCAGAGAGTAGA+CGG | + | chr3_2:66385764-66385783 | Msa0418610:intron | 40.0% | |
TGTTAGAAGCAAGCAAGCTA+AGG | + | chr3_2:66385872-66385891 | Msa0418610:CDS | 40.0% | |
GTTAGAAGCAAGCAAGCTAA+GGG | + | chr3_2:66385873-66385892 | Msa0418610:CDS | 40.0% | |
CTCAGTTTCAGAGGATTCTT+TGG | + | chr3_2:66386166-66386185 | Msa0418610:CDS | 40.0% | |
TCAGAGGATTCTTTGGATGT+TGG | + | chr3_2:66386173-66386192 | Msa0418610:CDS | 40.0% | |
AGAATTGCTAAAAGCTGGCA+AGG | + | chr3_2:66386305-66386324 | Msa0418610:CDS | 40.0% | |
GACGGAGTAATCCTAAAAGT+AGG | + | chr3_2:66386396-66386415 | Msa0418610:CDS | 40.0% | |
ATCTTCCTCTGCTACACATT+TGG | - | chr3_2:66386519-66386538 | None:intergenic | 40.0% | |
TGTAATGTCTGACGACCAAT+TGG | + | chr3_2:66386538-66386557 | Msa0418610:CDS | 40.0% | |
CTGTTTAACTGTCCTTCGTT+TGG | - | chr3_2:66386882-66386901 | None:intergenic | 40.0% | |
!!! | GAGGTGTCTGGTTTTTCATT+TGG | - | chr3_2:66386925-66386944 | None:intergenic | 40.0% |
TGTTTACTCCGCAAATGAGA+CGG | - | chr3_2:66386995-66387014 | None:intergenic | 40.0% | |
CATATCTATACTAGGCTCTC+TGG | - | chr3_2:66387029-66387048 | None:intergenic | 40.0% | |
CAGAGAGCCTAGTATAGATA+TGG | + | chr3_2:66387027-66387046 | Msa0418610:CDS | 40.0% | |
GCCTAGTATAGATATGGAAG+AGG | + | chr3_2:66387033-66387052 | Msa0418610:CDS | 40.0% | |
GATATGGAAGAGGATGAAGA+AGG | + | chr3_2:66387043-66387062 | Msa0418610:CDS | 40.0% | |
AAAGAGAGTCTCAAAAGCTC+AGG | + | chr3_2:66387087-66387106 | Msa0418610:CDS | 40.0% | |
CAAAAGACAGGCAAACCAAA+AGG | + | chr3_2:66387125-66387144 | Msa0418610:CDS | 40.0% | |
ACAGGCAAACCAAAAGGAAA+AGG | + | chr3_2:66387131-66387150 | Msa0418610:CDS | 40.0% | |
CAGGCAAACCAAAAGGAAAA+GGG | + | chr3_2:66387132-66387151 | Msa0418610:CDS | 40.0% | |
AAATGATGTTGCAGCTGCAA+AGG | + | chr3_2:66387156-66387175 | Msa0418610:CDS | 40.0% | |
!! | TTCTTTTGACTCGAAGCTCA+TGG | - | chr3_2:66387248-66387267 | None:intergenic | 40.0% |
CTTCGAGTCAAAAGAAGAGT+TGG | + | chr3_2:66387252-66387271 | Msa0418610:CDS | 40.0% | |
AGAAACATCTGTCCAGTACA+GGG | + | chr3_2:66387286-66387305 | Msa0418610:CDS | 40.0% | |
GTTGCAAGATGTCTTTCAAG+TGG | + | chr3_2:66387398-66387417 | Msa0418610:CDS | 40.0% | |
! | TGGAGCTACATAAGAGCATG+AGG | - | chr3_2:66381716-66381735 | None:intergenic | 45.0% |
!! | GAAGGTGTTAGAGGGTCAAA+TGG | - | chr3_2:66381762-66381781 | None:intergenic | 45.0% |
! | CGGACAAGGTTGATTTCTGA+AGG | - | chr3_2:66381780-66381799 | None:intergenic | 45.0% |
ACTATGACAAAGGCTTGACG+AGG | - | chr3_2:66381939-66381958 | None:intergenic | 45.0% | |
! | CGGTTTGTTCACCAAAGGTA+AGG | - | chr3_2:66382055-66382074 | None:intergenic | 45.0% |
! | TGCAACGGTTTGTTCACCAA+AGG | - | chr3_2:66382060-66382079 | None:intergenic | 45.0% |
!!! | GCTTTTACGGTAGGTTGGTT+TGG | + | chr3_2:66382161-66382180 | Msa0418610:intron | 45.0% |
ATTCCAGTGCCAAAAGCTGA+AGG | + | chr3_2:66382328-66382347 | Msa0418610:CDS | 45.0% | |
! | TCTAAGATGAAGCCACCGTT+TGG | + | chr3_2:66382367-66382386 | Msa0418610:CDS | 45.0% |
!! | TTAAGCTTTGGACCAAACGG+TGG | - | chr3_2:66382382-66382401 | None:intergenic | 45.0% |
CCGTTTGGTCCAAAGCTTAA+AGG | + | chr3_2:66382382-66382401 | Msa0418610:CDS | 45.0% | |
! | AGTGAGACTAGTCAAGGAGA+TGG | + | chr3_2:66382725-66382744 | Msa0418610:intron | 45.0% |
GACATAAGATACCTAGCTGC+TGG | - | chr3_2:66382833-66382852 | None:intergenic | 45.0% | |
ATTGCTACCAGGTAATCCAG+AGG | - | chr3_2:66382895-66382914 | None:intergenic | 45.0% | |
CGGGAATATGTGCATCTTCA+TGG | - | chr3_2:66382932-66382951 | None:intergenic | 45.0% | |
! | CCTGCATACATATTTGGCTC+GGG | - | chr3_2:66382951-66382970 | None:intergenic | 45.0% |
GCCTGCATACATATTTGGCT+CGG | - | chr3_2:66382952-66382971 | None:intergenic | 45.0% | |
! | ACAGATTGGCCACACAATTC+AGG | - | chr3_2:66383148-66383167 | None:intergenic | 45.0% |
! | CTGTGTTTCTGCTCTACAGT+AGG | - | chr3_2:66383182-66383201 | None:intergenic | 45.0% |
! | AACACAGTTGTTTCGCATGC+TGG | + | chr3_2:66383195-66383214 | Msa0418610:intron | 45.0% |
TGGACTTATATGGGGTCTCA+AGG | + | chr3_2:66383438-66383457 | Msa0418610:intron | 45.0% | |
CTTATATGGGGTCTCAAGGT+TGG | + | chr3_2:66383442-66383461 | Msa0418610:intron | 45.0% | |
! | CTTCTAGTCTTCCGGAGTTT+AGG | - | chr3_2:66383533-66383552 | None:intergenic | 45.0% |
CAGTTCATGACACTTATGGC+CGG | - | chr3_2:66383598-66383617 | None:intergenic | 45.0% | |
! | GCTCTGATTTTCCTTGGCAA+CGG | + | chr3_2:66383809-66383828 | Msa0418610:intron | 45.0% |
! | ATTTTCCTTGGCAACGGTCT+AGG | + | chr3_2:66383815-66383834 | Msa0418610:intron | 45.0% |
! | TTTTACCTAGACCGTTGCCA+AGG | - | chr3_2:66383823-66383842 | None:intergenic | 45.0% |
!! | GCATTATTGGCTTCAGCGTA+TGG | + | chr3_2:66383949-66383968 | Msa0418610:CDS | 45.0% |
TGGAAGTTCTTCTGACTCTG+AGG | + | chr3_2:66383969-66383988 | Msa0418610:CDS | 45.0% | |
TCTGAGGAAGATGCAGTTGA+CGG | + | chr3_2:66383985-66384004 | Msa0418610:CDS | 45.0% | |
! | ATAGCTGGCACTCTCTGAAA+GGG | - | chr3_2:66384109-66384128 | None:intergenic | 45.0% |
ATCACGGGAACTATATGTGG+TGG | - | chr3_2:66384250-66384269 | None:intergenic | 45.0% | |
CTCAGCGTCATTAGTATCAC+GGG | - | chr3_2:66384265-66384284 | None:intergenic | 45.0% | |
ATATGTGGGCTCCACCTATT+GGG | - | chr3_2:66384422-66384441 | None:intergenic | 45.0% | |
AATATGTGGGCTCCACCTAT+TGG | - | chr3_2:66384423-66384442 | None:intergenic | 45.0% | |
TCTTATGTCATCCAGGTCTG+AGG | + | chr3_2:66384445-66384464 | Msa0418610:intron | 45.0% | |
CTTATGTCATCCAGGTCTGA+GGG | + | chr3_2:66384446-66384465 | Msa0418610:intron | 45.0% | |
AATCAATCAACCCTCAGACC+TGG | - | chr3_2:66384459-66384478 | None:intergenic | 45.0% | |
CGACGAGGTGCATAGAATAA+AGG | - | chr3_2:66384686-66384705 | None:intergenic | 45.0% | |
TTATAGGGTCCTTAGGACAC+TGG | - | chr3_2:66384815-66384834 | None:intergenic | 45.0% | |
CAATGTAGGAAACTGAGCCT+CGG | + | chr3_2:66384953-66384972 | Msa0418610:intron | 45.0% | |
AATGTAGGAAACTGAGCCTC+GGG | + | chr3_2:66384954-66384973 | Msa0418610:intron | 45.0% | |
CGTGGCTCAATAATAGTTGG+TGG | + | chr3_2:66385067-66385086 | Msa0418610:intron | 45.0% | |
TGTGCTTCAGCCTCTATCTT+GGG | - | chr3_2:66385245-66385264 | None:intergenic | 45.0% | |
!! | ACAGTTGGTGGCAGAAGATT+TGG | + | chr3_2:66385262-66385281 | Msa0418610:CDS | 45.0% |
!! | CAGTTGGTGGCAGAAGATTT+GGG | + | chr3_2:66385263-66385282 | Msa0418610:CDS | 45.0% |
!! | AGTTGGTGGCAGAAGATTTG+GGG | + | chr3_2:66385264-66385283 | Msa0418610:CDS | 45.0% |
CGTGGAAGAATATTGCCTAC+AGG | + | chr3_2:66385297-66385316 | Msa0418610:CDS | 45.0% | |
! | GATCCTTTTCTCATCCTCCT+TGG | - | chr3_2:66385330-66385349 | None:intergenic | 45.0% |
AAGCTCACCGATAGAACCAA+AGG | + | chr3_2:66385517-66385536 | Msa0418610:CDS | 45.0% | |
GCCCTTCTCTGATAAACCTT+TGG | - | chr3_2:66385536-66385555 | None:intergenic | 45.0% | |
AAGGGCTGACAAGCAGAAAA+AGG | + | chr3_2:66385550-66385569 | Msa0418610:CDS | 45.0% | |
CCCTTATTGCTAAAAGGGGA+TGG | - | chr3_2:66385622-66385641 | None:intergenic | 45.0% | |
AAGTACCCCCAAAACTGCAA+CGG | + | chr3_2:66385714-66385733 | Msa0418610:intron | 45.0% | |
! | AGATAGCCGTTGCAGTTTTG+GGG | - | chr3_2:66385723-66385742 | None:intergenic | 45.0% |
! | GAGATAGCCGTTGCAGTTTT+GGG | - | chr3_2:66385724-66385743 | None:intergenic | 45.0% |
! | TGAGATAGCCGTTGCAGTTT+TGG | - | chr3_2:66385725-66385744 | None:intergenic | 45.0% |
GCAACGGCTATCTCAAAATC+AGG | + | chr3_2:66385730-66385749 | Msa0418610:intron | 45.0% | |
CTGAAGATAAACCCAGTCCT+CGG | + | chr3_2:66385838-66385857 | Msa0418610:CDS | 45.0% | |
!! | GCTAAGGGTGTTGAGAAAGA+TGG | + | chr3_2:66385888-66385907 | Msa0418610:CDS | 45.0% |
AGTGGTTTCAGATGATGCAG+TGG | + | chr3_2:66386076-66386095 | Msa0418610:CDS | 45.0% | |
AGAGAGAGACTCAGTTTCAG+AGG | + | chr3_2:66386157-66386176 | Msa0418610:CDS | 45.0% | |
CTGGAAGTCTTTCTGTGCAA+CGG | - | chr3_2:66386206-66386225 | None:intergenic | 45.0% | |
! | AGCAAGCATGCCGACTATAT+TGG | + | chr3_2:66386227-66386246 | Msa0418610:CDS | 45.0% |
TCTGATGACCATATGGAGAG+TGG | + | chr3_2:66386263-66386282 | Msa0418610:CDS | 45.0% | |
TCTGACAACCACTCTCCATA+TGG | - | chr3_2:66386274-66386293 | None:intergenic | 45.0% | |
GTGGTTGTCAGAAGCAGAAA+AGG | + | chr3_2:66386282-66386301 | Msa0418610:CDS | 45.0% | |
AGTGATATCAGACGACCAAC+TGG | + | chr3_2:66386352-66386371 | Msa0418610:CDS | 45.0% | |
ATCCTCTTTGGCAAGGTTTC+TGG | - | chr3_2:66386426-66386445 | None:intergenic | 45.0% | |
ACACAGTATCCTCTTTGGCA+AGG | - | chr3_2:66386433-66386452 | None:intergenic | 45.0% | |
GTCTGACACAGTATCCTCTT+TGG | - | chr3_2:66386438-66386457 | None:intergenic | 45.0% | |
ATCGTCGCAAGTACCAAAGA+AGG | + | chr3_2:66386474-66386493 | Msa0418610:CDS | 45.0% | |
AATGTCTGACGACCAATTGG+AGG | + | chr3_2:66386541-66386560 | Msa0418610:CDS | 45.0% | |
TGATCACTTTCAGAAGCAGC+AGG | + | chr3_2:66386655-66386674 | Msa0418610:CDS | 45.0% | |
GATCACTTTCAGAAGCAGCA+GGG | + | chr3_2:66386656-66386675 | Msa0418610:CDS | 45.0% | |
GCGCATTAAACAGACTGATG+AGG | + | chr3_2:66386697-66386716 | Msa0418610:CDS | 45.0% | |
TGCTGCATAGAACCCCTAAA+AGG | + | chr3_2:66386756-66386775 | Msa0418610:CDS | 45.0% | |
TAATGCAGCCGTCTCATTTG+CGG | + | chr3_2:66386984-66387003 | Msa0418610:CDS | 45.0% | |
ATGGAAGAGGATGAAGAAGG+CGG | + | chr3_2:66387046-66387065 | Msa0418610:CDS | 45.0% | |
!! | CTCTTTCTAAGGCGTGTACT+AGG | - | chr3_2:66387073-66387092 | None:intergenic | 45.0% |
AGCTTGCAATCCCAAATCAG+AGG | + | chr3_2:66387183-66387202 | Msa0418610:CDS | 45.0% | |
GAGAAACATCTGTCCAGTAC+AGG | + | chr3_2:66387285-66387304 | Msa0418610:CDS | 45.0% | |
!!! | TTTTTTCCGCAACCCTGTAC+TGG | - | chr3_2:66387301-66387320 | None:intergenic | 45.0% |
ACAAATATCTGGTGCAGCAC+CGG | + | chr3_2:66387332-66387351 | Msa0418610:CDS | 45.0% | |
! | AGATGTCTTTCAAGTGGGCA+TGG | + | chr3_2:66387404-66387423 | Msa0418610:CDS | 45.0% |
! | GATGTCTTTCAAGTGGGCAT+GGG | + | chr3_2:66387405-66387424 | Msa0418610:CDS | 45.0% |
GGTGTGAACTCGAATATGCT+CGG | - | chr3_2:66387437-66387456 | None:intergenic | 45.0% | |
! | GAGCATATTCGAGTTCACAC+CGG | + | chr3_2:66387436-66387455 | Msa0418610:CDS | 45.0% |
CTGAATGTTTGACCACAACC+TGG | - | chr3_2:66387487-66387506 | None:intergenic | 45.0% | |
AGTCGTCATAAGCGAAAGAC+TGG | + | chr3_2:66387523-66387542 | Msa0418610:CDS | 45.0% | |
GTTAGAGGGTCAAATGGGTG+AGG | - | chr3_2:66381756-66381775 | None:intergenic | 50.0% | |
!!! | AGGTGGTGGAGGAAGAGTTT+TGG | - | chr3_2:66381919-66381938 | None:intergenic | 50.0% |
ATGACAAAGGCTTGACGAGG+TGG | - | chr3_2:66381936-66381955 | None:intergenic | 50.0% | |
GGCTACCCTATCCTTACCTT+TGG | + | chr3_2:66382041-66382060 | Msa0418610:CDS | 50.0% | |
!!! | GTGCTGCTTTTACGGTAGGT+TGG | + | chr3_2:66382156-66382175 | Msa0418610:intron | 50.0% |
!! | TACGGTAGGTTGGTTTGGAG+AGG | + | chr3_2:66382166-66382185 | Msa0418610:intron | 50.0% |
! | GTTCCTTCAGCTTTTGGCAC+TGG | - | chr3_2:66382334-66382353 | None:intergenic | 50.0% |
TGACCTTGGATGGTGAAACC+AGG | - | chr3_2:66382433-66382452 | None:intergenic | 50.0% | |
ATTACCTCACGGAGTGACCT+TGG | - | chr3_2:66382447-66382466 | None:intergenic | 50.0% | |
! | CTGTTTTCGTGTGTCACGTG+TGG | + | chr3_2:66382764-66382783 | Msa0418610:intron | 50.0% |
CCCGAGCCAAATATGTATGC+AGG | + | chr3_2:66382948-66382967 | Msa0418610:CDS | 50.0% | |
CTCTGCATGCGCATGAACTT+AGG | + | chr3_2:66383229-66383248 | Msa0418610:intron | 50.0% | |
AACAAAGAGGGGAGCCAAAC+AGG | - | chr3_2:66383259-66383278 | None:intergenic | 50.0% | |
CGGCCATAAGTGTCATGAAC+TGG | + | chr3_2:66383596-66383615 | Msa0418610:intron | 50.0% | |
GAACATGCACCAATGCCCTT+TGG | + | chr3_2:66383688-66383707 | Msa0418610:intron | 50.0% | |
CATAGCTGGCACTCTCTGAA+AGG | - | chr3_2:66384110-66384129 | None:intergenic | 50.0% | |
GACGACTCTTCATCGCATTG+TGG | - | chr3_2:66384345-66384364 | None:intergenic | 50.0% | |
ATGTAGGAAACTGAGCCTCG+GGG | + | chr3_2:66384955-66384974 | Msa0418610:intron | 50.0% | |
CTGTGCTTCAGCCTCTATCT+TGG | - | chr3_2:66385246-66385265 | None:intergenic | 50.0% | |
GATAGAGGCTGAAGCACAGT+TGG | + | chr3_2:66385247-66385266 | Msa0418610:CDS | 50.0% | |
GCACCAAGGAGGATGAGAAA+AGG | + | chr3_2:66385324-66385343 | Msa0418610:CDS | 50.0% | |
GAAAAGGATCCAGTCAGCTC+TGG | + | chr3_2:66385340-66385359 | Msa0418610:CDS | 50.0% | |
GATAGTGAGGAAGCGAGTCT+CGG | + | chr3_2:66385362-66385381 | Msa0418610:CDS | 50.0% | |
ATAGTGAGGAAGCGAGTCTC+GGG | + | chr3_2:66385363-66385382 | Msa0418610:CDS | 50.0% | |
!! | GCTTGCTATAAAGGGGAGAG+CGG | - | chr3_2:66385445-66385464 | None:intergenic | 50.0% |
GTTGTTGCTGGCAAATGGTG+TGG | + | chr3_2:66385572-66385591 | Msa0418610:CDS | 50.0% | |
!! | GATAGCCGTTGCAGTTTTGG+GGG | - | chr3_2:66385722-66385741 | None:intergenic | 50.0% |
CGGCTATCTCAAAATCAGGC+AGG | + | chr3_2:66385734-66385753 | Msa0418610:intron | 50.0% | |
AGTAGACGGCGAATCAGGAA+AGG | + | chr3_2:66385778-66385797 | Msa0418610:intron | 50.0% | |
CTAACAAACCTTCTTGGCCG+AGG | - | chr3_2:66385858-66385877 | None:intergenic | 50.0% | |
AAGATGGTGCAGCTTTGCAG+AGG | + | chr3_2:66385904-66385923 | Msa0418610:CDS | 50.0% | |
ATAGTCGGCATGCTTGCTTC+TGG | - | chr3_2:66386225-66386244 | None:intergenic | 50.0% | |
AGCCAGAAACCTTGCCAAAG+AGG | + | chr3_2:66386421-66386440 | Msa0418610:CDS | 50.0% | |
GCAAGCCAAATGTGTAGCAG+AGG | + | chr3_2:66386511-66386530 | Msa0418610:CDS | 50.0% | |
TGTTTAATGCGCCTGCTCCT+AGG | - | chr3_2:66386689-66386708 | None:intergenic | 50.0% | |
TTCTGAGCTCCTCGTTTCAC+TGG | - | chr3_2:66386950-66386969 | None:intergenic | 50.0% | |
CAATCCCAAATCAGAGGACG+AGG | + | chr3_2:66387189-66387208 | Msa0418610:CDS | 50.0% | |
GCTTCCTCGTCCTCTGATTT+GGG | - | chr3_2:66387196-66387215 | None:intergenic | 50.0% | |
TGCTTCCTCGTCCTCTGATT+TGG | - | chr3_2:66387197-66387216 | None:intergenic | 50.0% | |
ATCTGTCCAGTACAGGGTTG+CGG | + | chr3_2:66387292-66387311 | Msa0418610:CDS | 50.0% | |
GGTCATCTTCATGAACTCGC+CGG | - | chr3_2:66387354-66387373 | None:intergenic | 50.0% | |
ACATCTTGCAACCCTTCCAG+GGG | - | chr3_2:66387390-66387409 | None:intergenic | 50.0% | |
GACATCTTGCAACCCTTCCA+GGG | - | chr3_2:66387391-66387410 | None:intergenic | 50.0% | |
AGACATCTTGCAACCCTTCC+AGG | - | chr3_2:66387392-66387411 | None:intergenic | 50.0% | |
ACATGCATAAGGTCGTGCAC+CGG | - | chr3_2:66387458-66387477 | None:intergenic | 50.0% | |
TGTTTGACCACAACCTGGCT+CGG | - | chr3_2:66387482-66387501 | None:intergenic | 50.0% | |
ACAAAGGCTTGACGAGGTGG+TGG | - | chr3_2:66381933-66381952 | None:intergenic | 55.0% | |
TGCAAGACCATTGGAGGGTG+TGG | + | chr3_2:66382249-66382268 | Msa0418610:CDS | 55.0% | |
!! | GTCGGTCAACATGATGGACC+TGG | + | chr3_2:66382412-66382431 | Msa0418610:CDS | 55.0% |
GGACCTGGTTTCACCATCCA+AGG | + | chr3_2:66382427-66382446 | Msa0418610:CDS | 55.0% | |
!! | TACCTAGCTGCTGGCTCTCT+AGG | - | chr3_2:66382824-66382843 | None:intergenic | 55.0% |
GTTGCTGCCTCTGGATTACC+TGG | + | chr3_2:66382885-66382904 | Msa0418610:CDS | 55.0% | |
CAAGTCGCAGACCTTTGCAG+AGG | + | chr3_2:66384901-66384920 | Msa0418610:intron | 55.0% | |
AGAGGCTGAAGCACAGTTGG+TGG | + | chr3_2:66385250-66385269 | Msa0418610:CDS | 55.0% | |
CCTCACTATCCAGAGCTGAC+TGG | - | chr3_2:66385352-66385371 | None:intergenic | 55.0% | |
!! | CCAGTCAGCTCTGGATAGTG+AGG | + | chr3_2:66385349-66385368 | Msa0418610:CDS | 55.0% |
AGGAAGCGAGTCTCGGGAAT+GGG | + | chr3_2:66385369-66385388 | Msa0418610:CDS | 55.0% | |
GGGGACTGGACTGTAAAGCT+AGG | + | chr3_2:66385389-66385408 | Msa0418610:CDS | 55.0% | |
GGTTCTATCGGTGAGCTTGC+TGG | - | chr3_2:66385515-66385534 | None:intergenic | 55.0% | |
GATTCGCCGTCTACTCTCTG+AGG | - | chr3_2:66385773-66385792 | None:intergenic | 55.0% | |
CAGAGAGTAGACGGCGAATC+AGG | + | chr3_2:66385773-66385792 | Msa0418610:intron | 55.0% | |
AACCTTCTTGGCCGAGGACT+GGG | - | chr3_2:66385852-66385871 | None:intergenic | 55.0% | |
AAACCTTCTTGGCCGAGGAC+TGG | - | chr3_2:66385853-66385872 | None:intergenic | 55.0% | |
TCTGCTTGTTCGGCTCCAGT+TGG | - | chr3_2:66386370-66386389 | None:intergenic | 55.0% | |
CGTCGCTGCTTCTGCTTGTT+CGG | - | chr3_2:66386380-66386399 | None:intergenic | 55.0% | |
CGAACAAGCAGAAGCAGCGA+CGG | + | chr3_2:66386378-66386397 | Msa0418610:CDS | 55.0% | |
! | GTTTCACTGGCTGAGGTGTC+TGG | - | chr3_2:66386937-66386956 | None:intergenic | 55.0% |
ACACCTCAGCCAGTGAAACG+AGG | + | chr3_2:66386938-66386957 | Msa0418610:CDS | 55.0% | |
! | AAGGCTTGACGAGGTGGTGG+AGG | - | chr3_2:66381930-66381949 | None:intergenic | 60.0% |
ACAGCTGCCACACCCTCCAA+TGG | - | chr3_2:66382259-66382278 | None:intergenic | 60.0% | |
! | ATTGGAGGGTGTGGCAGCTG+TGG | + | chr3_2:66382258-66382277 | Msa0418610:CDS | 60.0% |
CCTCACGGAGTGACCTTGGA+TGG | - | chr3_2:66382443-66382462 | None:intergenic | 60.0% | |
CCATCCAAGGTCACTCCGTG+AGG | + | chr3_2:66382440-66382459 | Msa0418610:CDS | 60.0% | |
AGCCTAGAGAGCCAGCAGCT+AGG | + | chr3_2:66382819-66382838 | Msa0418610:intron | 60.0% | |
!! | ATGGGTTGGGTTGCTGCCTC+TGG | + | chr3_2:66382876-66382895 | Msa0418610:CDS | 60.0% |
GGCTTATGCACCCCCTGAGA+TGG | + | chr3_2:66383479-66383498 | Msa0418610:intron | 60.0% | |
GAGCAGCAACTCCGCCCAAT+AGG | + | chr3_2:66384405-66384424 | Msa0418610:CDS | 60.0% | |
CAGCAACTCCGCCCAATAGG+TGG | + | chr3_2:66384408-66384427 | Msa0418610:CDS | 60.0% | |
TGTGGGCTCCACCTATTGGG+CGG | - | chr3_2:66384419-66384438 | None:intergenic | 60.0% | |
TGCCTACAGGCATGGCACCA+AGG | + | chr3_2:66385310-66385329 | Msa0418610:CDS | 60.0% | |
!! | CTCCTTGGTGCCATGCCTGT+AGG | - | chr3_2:66385315-66385334 | None:intergenic | 60.0% |
CTACAGGCATGGCACCAAGG+AGG | + | chr3_2:66385313-66385332 | Msa0418610:CDS | 60.0% | |
GAGGAAGCGAGTCTCGGGAA+TGG | + | chr3_2:66385368-66385387 | Msa0418610:CDS | 60.0% | |
GGAAGCGAGTCTCGGGAATG+GGG | + | chr3_2:66385370-66385389 | Msa0418610:CDS | 60.0% | |
AACCCAGTCCTCGGCCAAGA+AGG | + | chr3_2:66385847-66385866 | Msa0418610:CDS | 60.0% | |
! | GCTCCTCGTTTCACTGGCTG+AGG | - | chr3_2:66386944-66386963 | None:intergenic | 60.0% |
!! | TCCAGGGGCACTTCAGAGGA+CGG | - | chr3_2:66387375-66387394 | None:intergenic | 60.0% |
!! | TCCTCTGAAGTGCCCCTGGA+AGG | + | chr3_2:66387375-66387394 | Msa0418610:CDS | 60.0% |
!! | CCTCTGAAGTGCCCCTGGAA+GGG | + | chr3_2:66387376-66387395 | Msa0418610:CDS | 60.0% |
!! | CCTGGCTCGGCACATGCATA+AGG | - | chr3_2:66387469-66387488 | None:intergenic | 60.0% |
CCTTATGCATGTGCCGAGCC+AGG | + | chr3_2:66387466-66387485 | Msa0418610:CDS | 60.0% | |
CGAGTCTCGGGAATGGGGAC+TGG | + | chr3_2:66385375-66385394 | Msa0418610:CDS | 65.0% | |
!! | ACCGTCCTCTGAAGTGCCCC+TGG | + | chr3_2:66387371-66387390 | Msa0418610:CDS | 65.0% |
!! | CCCTTCCAGGGGCACTTCAG+AGG | - | chr3_2:66387379-66387398 | None:intergenic | 65.0% |
GCATGTGCCGAGCCAGGTTG+TGG | + | chr3_2:66387472-66387491 | Msa0418610:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 66381684 | 66387573 | 66381684 | ID=Msa0418610;Name=Msa0418610 |
chr3_2 | mRNA | 66381684 | 66387573 | 66381684 | ID=Msa0418610-mRNA-1;Parent=Msa0418610;Name=Msa0418610-mRNA-1;_AED=0.09;_eAED=0.11;_QI=0|0.2|0|1|1|1|6|0|1227 |
chr3_2 | exon | 66381684 | 66382084 | 66381684 | ID=Msa0418610-mRNA-1:exon:15139;Parent=Msa0418610-mRNA-1 |
chr3_2 | exon | 66382174 | 66382461 | 66382174 | ID=Msa0418610-mRNA-1:exon:15140;Parent=Msa0418610-mRNA-1 |
chr3_2 | exon | 66382821 | 66382969 | 66382821 | ID=Msa0418610-mRNA-1:exon:15141;Parent=Msa0418610-mRNA-1 |
chr3_2 | exon | 66383872 | 66384459 | 66383872 | ID=Msa0418610-mRNA-1:exon:15142;Parent=Msa0418610-mRNA-1 |
chr3_2 | exon | 66385237 | 66385715 | 66385237 | ID=Msa0418610-mRNA-1:exon:15143;Parent=Msa0418610-mRNA-1 |
chr3_2 | exon | 66385795 | 66387573 | 66385795 | ID=Msa0418610-mRNA-1:exon:15144;Parent=Msa0418610-mRNA-1 |
chr3_2 | CDS | 66381684 | 66382084 | 66381684 | ID=Msa0418610-mRNA-1:cds;Parent=Msa0418610-mRNA-1 |
chr3_2 | CDS | 66382174 | 66382461 | 66382174 | ID=Msa0418610-mRNA-1:cds;Parent=Msa0418610-mRNA-1 |
chr3_2 | CDS | 66382821 | 66382969 | 66382821 | ID=Msa0418610-mRNA-1:cds;Parent=Msa0418610-mRNA-1 |
chr3_2 | CDS | 66383872 | 66384459 | 66383872 | ID=Msa0418610-mRNA-1:cds;Parent=Msa0418610-mRNA-1 |
chr3_2 | CDS | 66385237 | 66385715 | 66385237 | ID=Msa0418610-mRNA-1:cds;Parent=Msa0418610-mRNA-1 |
chr3_2 | CDS | 66385795 | 66387573 | 66385795 | ID=Msa0418610-mRNA-1:cds;Parent=Msa0418610-mRNA-1 |
Gene Sequence |
Protein sequence |