AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0420570


Find 197 sgRNAs with CRISPR-Local

Find 1553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr3_2 gene 69161090 69186208 69161090 ID=Msa0420570;Name=Msa0420570
chr3_2 mRNA 69161090 69186208 69161090 ID=Msa0420570-mRNA-1;Parent=Msa0420570;Name=Msa0420570-mRNA-1;_AED=0.16;_eAED=0.21;_QI=0|0|0|0.88|0.66|0.68|25|0|986
chr3_2 exon 69161090 69161136 69161090 ID=Msa0420570-mRNA-1:exon:16387;Parent=Msa0420570-mRNA-1
chr3_2 exon 69163041 69163071 69163041 ID=Msa0420570-mRNA-1:exon:16388;Parent=Msa0420570-mRNA-1
chr3_2 exon 69163473 69163537 69163473 ID=Msa0420570-mRNA-1:exon:16389;Parent=Msa0420570-mRNA-1
chr3_2 exon 69164757 69164812 69164757 ID=Msa0420570-mRNA-1:exon:16390;Parent=Msa0420570-mRNA-1
chr3_2 exon 69164893 69165071 69164893 ID=Msa0420570-mRNA-1:exon:16391;Parent=Msa0420570-mRNA-1
chr3_2 exon 69166883 69166948 69166883 ID=Msa0420570-mRNA-1:exon:16392;Parent=Msa0420570-mRNA-1
chr3_2 exon 69167084 69167209 69167084 ID=Msa0420570-mRNA-1:exon:16393;Parent=Msa0420570-mRNA-1
chr3_2 exon 69167297 69167369 69167297 ID=Msa0420570-mRNA-1:exon:16394;Parent=Msa0420570-mRNA-1
chr3_2 exon 69168267 69168324 69168267 ID=Msa0420570-mRNA-1:exon:16395;Parent=Msa0420570-mRNA-1
chr3_2 exon 69168401 69168459 69168401 ID=Msa0420570-mRNA-1:exon:16396;Parent=Msa0420570-mRNA-1
chr3_2 exon 69168554 69168628 69168554 ID=Msa0420570-mRNA-1:exon:16397;Parent=Msa0420570-mRNA-1
chr3_2 exon 69169887 69170112 69169887 ID=Msa0420570-mRNA-1:exon:16398;Parent=Msa0420570-mRNA-1
chr3_2 exon 69170446 69170656 69170446 ID=Msa0420570-mRNA-1:exon:16399;Parent=Msa0420570-mRNA-1
chr3_2 exon 69171275 69171511 69171275 ID=Msa0420570-mRNA-1:exon:16400;Parent=Msa0420570-mRNA-1
chr3_2 exon 69171682 69171861 69171682 ID=Msa0420570-mRNA-1:exon:16401;Parent=Msa0420570-mRNA-1
chr3_2 exon 69174409 69174484 69174409 ID=Msa0420570-mRNA-1:exon:16402;Parent=Msa0420570-mRNA-1
chr3_2 exon 69174595 69174779 69174595 ID=Msa0420570-mRNA-1:exon:16403;Parent=Msa0420570-mRNA-1
chr3_2 exon 69175191 69175256 69175191 ID=Msa0420570-mRNA-1:exon:16404;Parent=Msa0420570-mRNA-1
chr3_2 exon 69175376 69175468 69175376 ID=Msa0420570-mRNA-1:exon:16405;Parent=Msa0420570-mRNA-1
chr3_2 exon 69175585 69175657 69175585 ID=Msa0420570-mRNA-1:exon:16406;Parent=Msa0420570-mRNA-1
chr3_2 exon 69179849 69179891 69179849 ID=Msa0420570-mRNA-1:exon:16407;Parent=Msa0420570-mRNA-1
chr3_2 exon 69180027 69180119 69180027 ID=Msa0420570-mRNA-1:exon:16408;Parent=Msa0420570-mRNA-1
chr3_2 exon 69185370 69185568 69185370 ID=Msa0420570-mRNA-1:exon:16409;Parent=Msa0420570-mRNA-1
chr3_2 exon 69185669 69185914 69185669 ID=Msa0420570-mRNA-1:exon:16410;Parent=Msa0420570-mRNA-1
chr3_2 exon 69186011 69186208 69186011 ID=Msa0420570-mRNA-1:exon:16411;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69161090 69161136 69161090 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69163041 69163071 69163041 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69163473 69163537 69163473 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69164757 69164812 69164757 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69164893 69165071 69164893 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69166883 69166948 69166883 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69167084 69167209 69167084 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69167297 69167369 69167297 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69168267 69168324 69168267 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69168401 69168459 69168401 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69168554 69168628 69168554 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69169887 69170112 69169887 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69170446 69170656 69170446 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69171275 69171511 69171275 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69171682 69171861 69171682 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69174409 69174484 69174409 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69174595 69174779 69174595 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69175191 69175256 69175191 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69175376 69175468 69175376 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69175585 69175657 69175585 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69179849 69179891 69179849 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69180027 69180119 69180027 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69185370 69185568 69185370 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69185669 69185914 69185669 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
chr3_2 CDS 69186011 69186208 69186011 ID=Msa0420570-mRNA-1:cds;Parent=Msa0420570-mRNA-1
Gene Sequence

>Msa0420570

ATGGGTCAGTCCCGAGCCGCGTCACGCTCATCTGCTCATGACAACAGACAAAAGAGAAGAGTACTATTAGGTGGTCTGTTGTTCATAAAACTTGGAACGGTAATAAAAACCATCTTAGGGCTTGTCTGGTTTCCTAAGGTAGGGTCCAAGAGAAAAAAGGCCGCTTTAAATGCTGATGATTTAGAAGCTTCATATGCAGGCATGGGAATAACTGATGGCAAAGTGTCACTATATCACTGTAATTACTGCAAAAAAAATATTTCAGGGAAGATTCACATCAAATGCGCTGTGTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTTTGTTGGTGCTGAGTTGACTCCTCATAAAAGCAATCATCCATATCGAGTTATGGATAGTCTATCTTTTCCGCTTACATCTCCAGATTGGAGTGCAGGTGAAGAGAAGTTACTTATTGAGGCCATTGACATGCATGGATTTGGGAATTGGAATGGTGTTGCTGAAAACGTTGGGACGAAAAGCAAATCTCAGTGTATTGACCATTATAATGCTGTATATCTGAATTCGCCATGTTTTCCTCTACCTGATTTGTCTTATTCTATGGGAAAGAACAAAGAGGAACTCCTTGCCATGGCAAAAGGACATCAACTCAAGAAAGATTTTCCTTCAAATGCAGAGCTGACTCTGAAAGAACCTCACCTTTCTGATGGAATAAACTCCGAAGAATCTAAGAAGGCAGAGACCACTAATCAAAACATGTCTAGGCCAACCTCAGCAGGCGATGAAGCTCTTCCAAGTATAACCAAGAAGGCTTCCATGAGTCAGAATAATGATGGAGTTAAGGTGGAAGGAGAATTTCAAGCAGGTTGGAGCACTGGTGAAAAGAAACCTAAATTATCTGGGGAATATAAGCCATCTATGGAAGTGTTGAGAGGGTACAATTCTAACAGAGGTGAATTTGAGATTGAATATGACAATGAGGCCGAGCAAGTTTTGGCAGAAATGGAATTTAAGGACACTGATACTGAAGCTGAACGTGAAACGAAACTGCAGGTGCTCCGTGGCTACGGAAAAAAGCTAGATGAACGAAAGCACAGAAAAGAATTTATACTTGAAAGAAATTTACTTTATCCTGATCCTTTTGAGAAATTTCTCTCACCTGAAGAGCTTCAAATATGTGAACAGTACAAGGTCTTCATGCGGTTTCACTCAAAAGAAGAGCATGAGGAGTTGCTGCAAACTGCTATTCGAGAACACCGACTTGCCAAAAGAATAAAAGACTTAAAGGAAGCTAGAATTGCTGGCTGTGTAACTTCTGATGAAGCTTATCAATTTATTGAACAAAAGAGGACAAAAGAAGCTGAACAAGGTAACTATAAAGAAAGTGGTCAGATTGGAACAAGCGGCAAGACAGAATCATTTCCTAGTACCAAGGATGCACCGCCAGCCATACAAGCTATCACAAAGACACTAGAAGAATGGGATATTAGTGATTTTGAAGGGGCTGAATTGCTATCTGAATCTGAGATAAAGCTTTGTAATGAGATCAGAATGCTACCACCCATCTTCCTCAACATTACGCGGATCATGCAGTTAGAAATTTCAAAGGGCAGACTAACCAAGAAATCTGATGCATATCCACTGTTCAAGTTCTCTCCAAGCAAGATTGACAGAATTTATGGTTTGCTTGTGGAAAAAGGAGTTAAAAAAAGTGCTGCTTTTGGATCCAAGAAAAAAAAGGCTGCTTTAAATGCTGAGGGTTTAGAAACTTCATTTGCAGGCATGGAAGTCACTGATGGCAAGGTATCATTATATCAGTGCAAATGCAAATACTGCAAAATTGATATTTCAGGGAAGGCACGTATCAAATGCGCTGTGTGTCAAGATTTCAATCTTTGCGTAAAATGCTTTTCTGTTGGTGCTGAGGTGAAACCTCATAAAAGCAATCATCCATATCAGGTTATGGAAGATCTTTCTTTTCCGCTTACATGTCCAGATTGGAGTGCGCATGAAGAGAGGTTACTTCTTGAGGCCCTTGACATGTATGGATTTGAGAATTGGAATGGTGTTGCCGAACATGTTGGGTCGAAAAGCAAACCTGAATGTATTGACCACTATAATGTGGATTTGTCTTATTCCAAGGGAAAGAACAAAGAGCAACTCCGTGCCATGGGAAAGCGAGATCAACTCAAGAAAGGAAGATCTATCTTTTCCGCTTACATGTCCAGATTGGAGTGCGCGCCCTTGACATGTATGGATTTGCAAATTGGAATGGTGTTGCTGAACATGTTGGGACAAAAAGCGAATCTCAGTGTATTGGCCACTATAATGATAGAGCACAAGAAGAAATTTATACTTGAAAGAAGTTTGCTATATCCAAATCCATTTCAGAAGGATTTAACACCCGAGGAAAAGGCAATATGCCAGAAATATGACGTGTTAATGCGCTTTCATACTAAGGAAAAGCACAATGAATCTCTTAGAACTGTTATCTCTGAACATAGATATCTGAAAAGAATTCAAGAGCTTAAGGAAGCAATTGTTGTTGGTTGCCGTTGTTCAGATGAAGCACATATATATCTGGCAAATAAGAGAAGAAATGAAGCTGAAGGAAGTGCTCGTTGGGCAAGAGAAAGTACTCATATGGTCCCAAACAATCACGGGGTTCCGAATGCATTGATGTCTCCAGACTCTGCTGGTACCAGACCTGCAGGGCCAGCTACATCAAGTGTTGTCAAAGCAACAGGATACGCTGTAGCAGATTTACTTTCTGAAGTTGAGAAACATTTGTGCTGCAAGTTAAGGTTGTCTCCATCCATGTATCTGAAGATGCAAGAGGACATGTCGGTACAAATGATTGCTAGAAGTGTCTCTTCAAAGTTCGATGTTCATCAAATGTTCAAGAATATGGATATCATGAGAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGTATTGGTTCCTCCCTGA

Protein sequence

>Msa0420570

MGQSRAASRSSAHDNRQKRRVLLGGLLFIKLGTVIKTILGLVWFPKVGSKRKKAALNADDLEASYAGMGITDGKVSLYHCNYCKKNISGKIHIKCAVCQDFDLCIECFFVGAELTPHKSNHPYRVMDSLSFPLTSPDWSAGEEKLLIEAIDMHGFGNWNGVAENVGTKSKSQCIDHYNAVYLNSPCFPLPDLSYSMGKNKEELLAMAKGHQLKKDFPSNAELTLKEPHLSDGINSEESKKAETTNQNMSRPTSAGDEALPSITKKASMSQNNDGVKVEGEFQAGWSTGEKKPKLSGEYKPSMEVLRGYNSNRGEFEIEYDNEAEQVLAEMEFKDTDTEAERETKLQVLRGYGKKLDERKHRKEFILERNLLYPDPFEKFLSPEELQICEQYKVFMRFHSKEEHEELLQTAIREHRLAKRIKDLKEARIAGCVTSDEAYQFIEQKRTKEAEQGNYKESGQIGTSGKTESFPSTKDAPPAIQAITKTLEEWDISDFEGAELLSESEIKLCNEIRMLPPIFLNITRIMQLEISKGRLTKKSDAYPLFKFSPSKIDRIYGLLVEKGVKKSAAFGSKKKKAALNAEGLETSFAGMEVTDGKVSLYQCKCKYCKIDISGKARIKCAVCQDFNLCVKCFSVGAEVKPHKSNHPYQVMEDLSFPLTCPDWSAHEERLLLEALDMYGFENWNGVAEHVGSKSKPECIDHYNVDLSYSKGKNKEQLRAMGKRDQLKKGRSIFSAYMSRLECAPLTCMDLQIGMVLLNMLGQKANLSVLATIMIEHKKKFILERSLLYPNPFQKDLTPEEKAICQKYDVLMRFHTKEKHNESLRTVISEHRYLKRIQELKEAIVVGCRCSDEAHIYLANKRRNEAEGSARWARESTHMVPNNHGVPNALMSPDSAGTRPAGPATSSVVKATGYAVADLLSEVEKHLCCKLRLSPSMYLKMQEDMSVQMIARSVSSKFDVHQMFKNMDIMRKLTGCMICSLRRVLVPP*