AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0422420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422420 MtrunA17_Chr3g0117511 98.210 447 7 1 1 446 3 449 0.0 912
Msa0422420 MtrunA17_Chr4g0058991 54.920 437 169 13 4 425 28 451 2.39e-148 430
Msa0422420 MtrunA17_Chr5g0421201 58.621 203 48 7 232 429 12 183 7.27e-68 214
Msa0422420 MtrunA17_Chr5g0429661 61.379 145 48 2 165 302 108 251 3.93e-56 189
Msa0422420 MtrunA17_Chr7g0228531 70.079 127 37 1 174 300 214 339 5.29e-56 191
Msa0422420 MtrunA17_Chr7g0228481 65.354 127 43 1 174 300 214 339 3.81e-50 176
Msa0422420 MtrunA17_Chr7g0228401 45.989 187 76 2 170 331 245 431 1.33e-43 159
Msa0422420 MtrunA17_Chr7g0233061 56.522 138 56 3 170 305 170 305 5.22e-42 152
Msa0422420 MtrunA17_Chr1g0177901 55.396 139 52 3 190 327 4 133 1.38e-40 144
Msa0422420 MtrunA17_Chr7g0238631 64.078 103 37 0 178 280 111 213 2.39e-40 152
Msa0422420 MtrunA17_Chr1g0157731 58.252 103 43 0 178 280 89 191 1.90e-38 148
Msa0422420 MtrunA17_Chr3g0139671 59.223 103 42 0 178 280 83 185 5.46e-38 147
Msa0422420 MtrunA17_Chr5g0397841 57.143 98 42 0 177 274 107 204 7.52e-35 135
Msa0422420 MtrunA17_Chr5g0401731 50.909 110 54 0 173 282 8 117 3.55e-34 130
Msa0422420 MtrunA17_Chr4g0053431 53.271 107 50 0 176 282 1 107 5.38e-34 128
Msa0422420 MtrunA17_Chr3g0133601 39.869 153 90 1 173 325 30 180 3.89e-33 124
Msa0422420 MtrunA17_Chr4g0008551 53.922 102 47 0 179 280 37 138 8.26e-33 127
Msa0422420 MtrunA17_Chr6g0454921 47.273 110 58 0 173 282 8 117 1.80e-31 119
Msa0422420 MtrunA17_Chr5g0437321 53.061 98 46 0 179 276 18 115 4.78e-30 118
Msa0422420 MtrunA17_Chr7g0233151 71.831 71 20 0 230 300 1 71 2.78e-28 110
Msa0422420 MtrunA17_Chr4g0055981 41.912 136 74 3 165 297 44 177 1.09e-27 110
Msa0422420 MtrunA17_Chr5g0435101 47.059 119 58 3 167 283 2 117 3.88e-27 108
Msa0422420 MtrunA17_Chr3g0099131 46.552 116 57 3 177 290 40 152 4.90e-27 113
Msa0422420 MtrunA17_Chr6g0460661 47.525 101 53 0 180 280 16 116 5.75e-27 106
Msa0422420 MtrunA17_Chr5g0417621 40.136 147 84 2 163 309 117 259 8.33e-27 112
Msa0422420 MtrunA17_Chr4g0042501 43.548 124 68 1 180 303 105 226 1.55e-26 110
Msa0422420 MtrunA17_Chr6g0480581 44.800 125 67 1 180 304 4 126 1.56e-26 107
Msa0422420 MtrunA17_Chr2g0281071 48.039 102 52 1 180 280 15 116 2.53e-26 108
Msa0422420 MtrunA17_Chr2g0323411 48.039 102 52 1 180 280 14 115 7.06e-26 107
Msa0422420 MtrunA17_Chr8g0354661 37.415 147 82 3 152 297 18 155 7.46e-26 110
Msa0422420 MtrunA17_Chr8g0346561 47.059 102 53 1 175 275 9 110 8.91e-26 106
Msa0422420 MtrunA17_Chr3g0103281 44.545 110 60 1 174 282 8 117 1.17e-25 106
Msa0422420 MtrunA17_Chr5g0395281 47.573 103 51 2 180 280 14 115 1.22e-25 106
Msa0422420 MtrunA17_Chr4g0037141 49.533 107 51 2 180 284 14 119 1.29e-25 105
Msa0422420 MtrunA17_Chr3g0104491 60.759 79 26 1 230 303 17 95 1.47e-25 105
Msa0422420 MtrunA17_Chr3g0080861 42.188 128 69 3 172 297 31 155 1.64e-25 108
Msa0422420 MtrunA17_Chr2g0323351 44.444 117 60 3 180 294 14 127 1.64e-25 104
Msa0422420 MtrunA17_Chr4g0022901 41.026 117 65 3 166 280 2 116 1.81e-25 105
Msa0422420 MtrunA17_Chr5g0410961 43.636 110 61 1 175 283 9 118 2.13e-25 106
Msa0422420 MtrunA17_Chr3g0117091 42.609 115 61 3 172 284 8 119 2.20e-25 106
Msa0422420 MtrunA17_Chr8g0343831 47.170 106 55 1 180 284 10 115 2.74e-25 103
Msa0422420 MtrunA17_Chr1g0211161 42.609 115 61 3 172 284 9 120 2.83e-25 103
Msa0422420 MtrunA17_Chr4g0048511 47.059 102 53 1 180 280 15 116 3.02e-25 106
Msa0422420 MtrunA17_Chr7g0254261 43.651 126 71 0 180 305 89 214 3.36e-25 105
Msa0422420 MtrunA17_Chr3g0131121 46.667 120 58 4 167 283 3 119 3.85e-25 104
Msa0422420 MtrunA17_Chr5g0441131 42.373 118 64 3 176 291 7 122 4.13e-25 101
Msa0422420 MtrunA17_Chr6g0452271 42.727 110 62 1 175 283 9 118 4.51e-25 105
Msa0422420 MtrunA17_Chr4g0058631 38.806 134 78 3 172 304 8 138 5.07e-25 105
Msa0422420 MtrunA17_Chr4g0044421 42.857 119 66 2 167 284 2 119 5.75e-25 101
Msa0422420 MtrunA17_Chr5g0434571 44.144 111 59 2 175 283 45 154 6.45e-25 105
Msa0422420 MtrunA17_Chr8g0385321 44.167 120 61 4 167 283 3 119 6.55e-25 104
Msa0422420 MtrunA17_Chr4g0057031 43.243 111 60 2 175 283 9 118 6.69e-25 103
Msa0422420 MtrunA17_Chr4g0068061 44.444 108 59 1 174 280 8 115 7.48e-25 104
Msa0422420 MtrunA17_Chr1g0209661 43.137 102 57 1 180 280 29 130 7.50e-25 104
Msa0422420 MtrunA17_Chr4g0039971 47.115 104 52 2 180 281 15 117 9.38e-25 104
Msa0422420 MtrunA17_Chr3g0125801 47.368 114 57 1 180 290 16 129 9.69e-25 103
Msa0422420 MtrunA17_Chr3g0104501 39.264 163 72 5 90 231 28 184 9.69e-25 101
Msa0422420 MtrunA17_Chr4g0070611 44.737 114 52 3 167 275 3 110 9.90e-25 103
Msa0422420 MtrunA17_Chr1g0167691 43.478 115 62 2 167 280 3 115 1.24e-24 102
Msa0422420 MtrunA17_Chr3g0088461 43.443 122 61 2 167 280 4 125 1.25e-24 104
Msa0422420 MtrunA17_Chr7g0275911 46.078 102 54 1 175 275 9 110 1.48e-24 102
Msa0422420 MtrunA17_Chr1g0193371 44.660 103 54 2 180 280 14 115 1.49e-24 104
Msa0422420 MtrunA17_Chr3g0110351 43.243 111 60 2 175 283 9 118 1.61e-24 103
Msa0422420 MtrunA17_Chr4g0022911 41.176 102 59 1 180 280 15 116 2.13e-24 102
Msa0422420 MtrunA17_Chr4g0022931 39.655 116 68 2 166 280 2 116 2.25e-24 102
Msa0422420 MtrunA17_Chr2g0328771 45.098 102 55 1 180 280 22 123 2.50e-24 102
Msa0422420 MtrunA17_Chr1g0193801 34.731 167 98 4 180 339 14 176 2.62e-24 103
Msa0422420 MtrunA17_Chr5g0440781 44.737 114 59 3 180 291 14 125 3.38e-24 99.4
Msa0422420 MtrunA17_Chr4g0032401 42.857 119 63 2 167 280 2 120 3.45e-24 102
Msa0422420 MtrunA17_Chr5g0441141 44.737 114 59 3 180 291 14 125 3.57e-24 101
Msa0422420 MtrunA17_Chr4g0070641 44.348 115 53 3 166 275 2 110 3.92e-24 98.6
Msa0422420 MtrunA17_Chr5g0440761 44.737 114 59 3 180 291 14 125 4.07e-24 101
Msa0422420 MtrunA17_Chr2g0309911 43.636 110 57 3 173 280 8 114 4.10e-24 102
Msa0422420 MtrunA17_Chr7g0271241 48.454 97 47 2 180 274 14 109 4.29e-24 103
Msa0422420 MtrunA17_Chr7g0261281 44.660 103 56 1 174 275 8 110 4.52e-24 101
Msa0422420 MtrunA17_Chr7g0274581 40.541 111 65 1 174 283 8 118 4.72e-24 99.4
Msa0422420 MtrunA17_Chr1g0167661 43.478 115 62 2 167 280 3 115 5.19e-24 100
Msa0422420 MtrunA17_Chr1g0168661 44.248 113 55 3 180 290 23 129 6.09e-24 100
Msa0422420 MtrunA17_Chr1g0154031 43.363 113 58 2 180 291 78 185 8.72e-24 102
Msa0422420 MtrunA17_Chr5g0417821 42.727 110 62 1 172 280 1 110 1.11e-23 100
Msa0422420 MtrunA17_Chr7g0217741 42.342 111 63 1 174 283 8 118 1.23e-23 100
Msa0422420 MtrunA17_Chr2g0322521 46.774 124 61 3 170 291 21 141 1.28e-23 102
Msa0422420 MtrunA17_Chr1g0186061 46.939 98 49 2 178 273 20 116 1.39e-23 99.4
Msa0422420 MtrunA17_Chr6g0460671 47.059 102 54 0 179 280 98 199 1.53e-23 101
Msa0422420 MtrunA17_Chr7g0270891 42.593 108 60 2 180 286 14 120 1.57e-23 101
Msa0422420 MtrunA17_Chr3g0115821 46.602 103 52 2 180 280 14 115 1.88e-23 100
Msa0422420 MtrunA17_Chr5g0397231 45.361 97 52 1 180 275 14 110 2.79e-23 100
Msa0422420 MtrunA17_Chr8g0349261 47.170 106 48 4 175 275 10 112 2.82e-23 99.4
Msa0422420 MtrunA17_Chr8g0387421 30.851 188 106 3 180 343 14 201 3.28e-23 99.8
Msa0422420 MtrunA17_Chr7g0228891 41.284 109 61 2 175 281 9 116 3.40e-23 98.6
Msa0422420 MtrunA17_Chr1g0187761 39.831 118 68 2 174 289 8 124 3.88e-23 98.2
Msa0422420 MtrunA17_Chr8g0342541 42.718 103 56 2 180 280 14 115 3.91e-23 100
Msa0422420 MtrunA17_Chr1g0203411 41.593 113 64 2 180 291 14 125 7.88e-23 98.2
Msa0422420 MtrunA17_Chr5g0434931 33.129 163 103 3 180 340 37 195 8.17e-23 97.8
Msa0422420 MtrunA17_Chr8g0334881 46.078 102 53 2 180 279 12 113 8.76e-23 98.6
Msa0422420 MtrunA17_Chr7g0228231 45.263 95 51 1 180 273 16 110 1.09e-22 95.5
Msa0422420 MtrunA17_Chr8g0342521 43.689 103 55 2 180 280 14 115 1.15e-22 98.6
Msa0422420 MtrunA17_Chr4g0046181 68.254 63 20 0 174 236 215 277 1.48e-22 97.4
Msa0422420 MtrunA17_Chr2g0330041 42.718 103 56 2 180 280 14 115 1.87e-22 99.0
Msa0422420 MtrunA17_Chr4g0022891 32.075 212 118 9 180 375 14 215 2.59e-22 95.5
Msa0422420 MtrunA17_Chr4g0042671 40.541 111 65 1 174 283 8 118 3.06e-22 98.2
Msa0422420 MtrunA17_Chr1g0180391 37.778 135 78 3 158 290 2 132 3.79e-22 94.7
Msa0422420 MtrunA17_Chr7g0220341 40.323 124 70 2 176 295 23 146 4.73e-22 95.5
Msa0422420 MtrunA17_Chr8g0342481 41.441 111 59 4 173 280 9 116 5.19e-22 97.4
Msa0422420 MtrunA17_Chr3g0121241 39.216 102 61 1 175 275 39 140 5.82e-22 95.9
Msa0422420 MtrunA17_Chr5g0434911 41.026 117 65 3 170 284 14 128 6.91e-22 95.1
Msa0422420 MtrunA17_Chr6g0453471 41.818 110 63 1 175 283 9 118 7.63e-22 96.3
Msa0422420 MtrunA17_Chr4g0013361 44.118 102 55 2 180 279 12 113 8.89e-22 95.1
Msa0422420 MtrunA17_Chr4g0030881 40.870 115 58 2 180 285 9 122 9.07e-22 94.4
Msa0422420 MtrunA17_Chr6g0470971 39.831 118 69 2 169 285 6 122 1.06e-21 94.7
Msa0422420 MtrunA17_Chr6g0450101 40.741 108 63 1 167 273 3 110 1.35e-21 92.4
Msa0422420 MtrunA17_Chr1g0194951 36.875 160 91 4 175 332 9 160 1.94e-21 95.5
Msa0422420 MtrunA17_Chr7g0254411 41.441 111 64 1 174 283 8 118 2.35e-21 94.7
Msa0422420 MtrunA17_Chr1g0152011 37.594 133 74 3 175 298 9 141 2.37e-21 94.7
Msa0422420 MtrunA17_Chr7g0240821 47.368 95 47 2 183 275 6 99 2.39e-21 92.4
Msa0422420 MtrunA17_Chr3g0135311 42.982 114 62 3 175 285 9 122 3.35e-21 94.4
Msa0422420 MtrunA17_Chr3g0092401 41.441 111 64 1 174 283 9 119 5.00e-21 93.2
Msa0422420 MtrunA17_Chr7g0217221 41.905 105 60 1 180 283 14 118 5.20e-21 92.4
Msa0422420 MtrunA17_Chr5g0434841 40.000 115 66 2 172 284 14 127 5.25e-21 93.6
Msa0422420 MtrunA17_Chr4g0060721 39.640 111 66 1 174 283 9 119 6.44e-21 93.6
Msa0422420 MtrunA17_Chr7g0228991 39.623 106 63 1 180 284 31 136 7.68e-21 92.0
Msa0422420 MtrunA17_Chr1g0151941 37.931 116 68 3 167 280 3 116 7.78e-21 91.7
Msa0422420 MtrunA17_Chr5g0416341 42.982 114 62 2 170 281 17 129 8.06e-21 94.7
Msa0422420 MtrunA17_Chr4g0054391 44.118 102 55 2 175 274 9 110 1.31e-20 91.7
Msa0422420 MtrunA17_Chr6g0453211 44.330 97 53 1 180 275 14 110 1.65e-20 92.0
Msa0422420 MtrunA17_Chr2g0327821 41.667 108 60 2 180 285 8 114 1.71e-20 90.1
Msa0422420 MtrunA17_Chr2g0327351 43.689 103 56 2 175 275 9 111 2.73e-20 91.3
Msa0422420 MtrunA17_Chr5g0434831 41.121 107 60 2 180 284 9 114 2.73e-20 88.6
Msa0422420 MtrunA17_Chr5g0400821 41.667 108 61 2 175 280 9 116 2.78e-20 91.3
Msa0422420 MtrunA17_Chr1g0203441 39.286 112 67 1 173 283 8 119 3.46e-20 90.1
Msa0422420 MtrunA17_Chr1g0192411 40.566 106 62 1 176 280 10 115 4.60e-20 92.0
Msa0422420 MtrunA17_Chr7g0233161 72.414 58 16 0 174 231 293 350 4.70e-20 91.3
Msa0422420 MtrunA17_Chr1g0194291 40.187 107 63 1 180 285 23 129 7.74e-20 89.0
Msa0422420 MtrunA17_Chr1g0194301 39.815 108 62 2 180 285 35 141 8.75e-20 89.0
Msa0422420 MtrunA17_Chr7g0269831 38.562 153 91 2 174 323 8 160 1.70e-19 89.7
Msa0422420 MtrunA17_Chr8g0360111 41.237 97 56 1 180 275 27 123 1.70e-19 87.8
Msa0422420 MtrunA17_Chr8g0362231 38.776 98 60 0 183 280 25 122 1.80e-19 90.5
Msa0422420 MtrunA17_Chr2g0293911 37.838 111 67 2 175 284 21 130 2.01e-19 89.0
Msa0422420 MtrunA17_Chr4g0072751 43.689 103 56 2 175 275 9 111 2.52e-19 89.0
Msa0422420 MtrunA17_Chr4g0022881 39.175 97 58 1 180 275 14 110 2.93e-19 86.7
Msa0422420 MtrunA17_Chr4g0068921 42.000 100 55 2 176 273 22 120 4.35e-19 85.1
Msa0422420 MtrunA17_Chr6g0487491 37.600 125 66 4 167 281 3 125 7.54e-19 86.3
Msa0422420 MtrunA17_Chr4g0028311 39.815 108 63 2 175 280 9 116 8.60e-19 87.0
Msa0422420 MtrunA17_Chr3g0099141 44.578 83 45 1 177 258 39 121 1.00e-18 82.4
Msa0422420 MtrunA17_Chr2g0311221 42.268 97 55 1 180 275 16 112 1.38e-18 86.7
Msa0422420 MtrunA17_Chr7g0247131 36.719 128 59 2 213 340 14 119 1.44e-18 85.5
Msa0422420 MtrunA17_Chr7g0264641 38.889 108 64 2 175 280 9 116 3.50e-18 84.3
Msa0422420 MtrunA17_Chr7g0238651 40.000 110 63 2 180 286 7 116 8.54e-17 81.6
Msa0422420 MtrunA17_Chr5g0434901 45.455 66 36 0 213 278 9 74 2.83e-16 74.7
Msa0422420 MtrunA17_Chr5g0425591 41.176 85 48 2 176 258 7 91 6.79e-15 70.1
Msa0422420 MtrunA17_Chr7g0229101 45.455 66 36 0 213 278 8 73 1.42e-14 72.4
Msa0422420 MtrunA17_Chr4g0042611 40.244 82 46 2 174 253 8 88 2.74e-14 68.2
Msa0422420 MtrunA17_Chr2g0323321 40.000 80 45 2 180 257 13 91 2.80e-14 68.9
Msa0422420 MtrunA17_Chr3g0093811 39.437 71 43 0 213 283 18 88 3.63e-14 72.4
Msa0422420 MtrunA17_Chr2g0294811 37.805 82 48 2 174 253 8 88 1.68e-13 67.0
Msa0422420 MtrunA17_Chr5g0395221 41.250 80 46 1 175 253 9 88 2.89e-13 65.5
Msa0422420 MtrunA17_Chr7g0229131 41.791 67 39 0 213 279 8 74 6.41e-13 67.0
Msa0422420 MtrunA17_Chr6g0483051 36.441 118 69 2 180 292 120 236 1.33e-12 69.7
Msa0422420 MtrunA17_Chr8g0342461 40.000 85 45 4 173 254 9 90 6.93e-12 63.2
Msa0422420 MtrunA17_Chr4g0046171 68.182 44 14 0 261 304 1 44 1.36e-11 62.0
Msa0422420 MtrunA17_Chr8g0342471 40.000 85 45 4 173 254 9 90 2.15e-11 61.6
Msa0422420 MtrunA17_Chr6g0453751 30.476 105 60 3 156 258 17 110 2.36e-11 61.2
Msa0422420 MtrunA17_Chr8g0342531 36.364 77 46 2 180 254 14 89 2.88e-11 62.0
Msa0422420 MtrunA17_Chr8g0342511 36.585 82 47 3 173 252 9 87 4.58e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422420 AT4G18770.1 48.949 333 145 6 72 392 107 426 1.43e-95 294
Msa0422420 AT3G27785.1 64.000 150 50 2 164 309 173 322 1.31e-59 201
Msa0422420 AT5G58850.1 62.329 146 42 2 171 303 96 241 9.37e-55 188
Msa0422420 AT5G11050.1 66.923 130 42 1 161 289 86 215 3.16e-52 181
Msa0422420 AT5G40360.1 58.696 138 55 1 173 308 151 288 1.32e-49 172
Msa0422420 AT3G09370.1 59.167 120 47 1 177 294 127 246 1.36e-40 152
Msa0422420 AT3G09370.2 59.167 120 47 1 177 294 132 251 1.39e-40 152
Msa0422420 AT3G09370.3 59.167 120 47 1 177 294 140 259 1.69e-40 152
Msa0422420 AT5G02320.1 61.165 103 40 0 178 280 125 227 8.79e-39 147
Msa0422420 AT5G02320.2 61.165 103 40 0 178 280 125 227 8.79e-39 147
Msa0422420 AT5G02320.3 61.165 103 40 0 178 280 65 167 9.18e-39 146
Msa0422420 AT2G25230.1 48.872 133 68 0 174 306 20 152 4.90e-38 138
Msa0422420 AT5G11510.2 53.279 122 51 1 178 299 79 194 1.74e-37 145
Msa0422420 AT5G11510.3 53.279 122 51 1 178 299 79 194 1.75e-37 146
Msa0422420 AT5G11510.1 53.279 122 51 1 178 299 79 194 1.75e-37 146
Msa0422420 AT5G11510.4 53.279 122 51 1 178 299 79 194 1.75e-37 146
Msa0422420 AT5G11510.5 45.223 157 66 2 178 334 79 215 1.99e-37 145
Msa0422420 AT4G32730.5 55.000 120 49 1 178 297 85 199 4.65e-37 145
Msa0422420 AT4G32730.4 55.000 120 49 1 178 297 85 199 4.65e-37 145
Msa0422420 AT4G32730.3 55.000 120 49 1 178 297 85 199 4.65e-37 145
Msa0422420 AT4G32730.2 55.000 120 49 1 178 297 85 199 4.65e-37 145
Msa0422420 AT4G32730.1 55.000 120 49 1 178 297 85 199 5.53e-37 144
Msa0422420 AT3G55730.1 45.833 144 76 1 179 320 55 198 9.70e-36 136
Msa0422420 AT5G40430.1 47.761 134 67 3 174 306 48 179 1.64e-34 129
Msa0422420 AT4G37260.1 51.351 111 54 0 172 282 5 115 3.39e-33 127
Msa0422420 AT4G00540.2 59.615 104 39 1 180 280 103 206 5.04e-33 129
Msa0422420 AT2G23290.1 51.351 111 54 0 172 282 5 115 9.56e-33 126
Msa0422420 AT4G00540.1 59.615 104 39 1 180 280 101 204 1.45e-32 128
Msa0422420 AT3G09230.1 53.398 103 48 0 179 281 54 156 8.46e-31 122
Msa0422420 AT3G50060.1 48.077 104 54 0 179 282 5 108 1.50e-29 117
Msa0422420 AT5G67300.1 50.000 102 51 0 179 280 5 106 2.25e-29 117
Msa0422420 AT5G26660.1 37.725 167 98 4 180 344 14 176 8.43e-29 116
Msa0422420 AT3G29020.1 50.000 106 50 1 180 282 65 170 5.21e-28 111
Msa0422420 AT3G29020.2 50.000 106 50 1 180 282 67 172 1.56e-27 112
Msa0422420 AT3G28470.1 36.628 172 101 3 175 339 9 179 1.82e-27 112
Msa0422420 AT3G11440.2 45.000 120 61 3 174 291 37 153 2.02e-27 114
Msa0422420 AT2G39880.1 47.170 106 56 0 179 284 49 154 2.23e-27 112
Msa0422420 AT3G11440.3 41.912 136 70 4 174 307 37 165 5.34e-27 114
Msa0422420 AT3G11440.4 41.912 136 70 4 174 307 37 165 5.34e-27 114
Msa0422420 AT3G11440.1 41.912 136 70 4 174 307 37 165 5.34e-27 114
Msa0422420 AT5G14750.1 40.000 120 71 1 178 296 16 135 6.26e-27 107
Msa0422420 AT1G22640.1 48.333 120 57 3 167 284 3 119 8.87e-27 108
Msa0422420 AT1G69560.2 41.549 142 75 2 155 290 92 231 1.25e-26 110
Msa0422420 AT1G69560.1 41.549 142 75 2 155 290 76 215 1.32e-26 110
Msa0422420 AT1G74430.1 46.226 106 56 1 180 284 14 119 1.47e-26 108
Msa0422420 AT4G28110.1 47.619 105 54 1 180 283 14 118 1.68e-26 108
Msa0422420 AT2G26960.1 35.484 186 95 4 175 359 17 178 1.82e-26 111
Msa0422420 AT2G32460.1 47.826 115 53 4 180 291 20 130 2.44e-26 111
Msa0422420 AT4G26930.1 44.248 113 60 2 180 291 21 131 2.49e-26 110
Msa0422420 AT5G55020.1 44.248 113 60 2 180 291 28 138 2.54e-26 111
Msa0422420 AT2G32460.2 47.826 115 53 4 180 291 8 118 2.64e-26 111
Msa0422420 AT4G05100.1 46.018 113 60 1 172 283 7 119 2.89e-26 108
Msa0422420 AT1G26780.1 46.154 117 61 1 180 296 98 212 3.58e-26 107
Msa0422420 AT4G38620.1 50.467 107 50 2 180 284 14 119 4.11e-26 107
Msa0422420 AT1G26780.2 46.154 117 61 1 180 296 98 212 4.41e-26 108
Msa0422420 AT5G06100.1 40.876 137 70 4 180 308 34 167 7.25e-26 109
Msa0422420 AT2G26950.1 43.200 125 60 3 172 291 10 128 8.82e-26 108
Msa0422420 AT5G12870.1 43.651 126 59 3 167 283 2 124 1.02e-25 106
Msa0422420 AT4G21440.1 49.020 102 51 1 180 280 14 115 1.06e-25 107
Msa0422420 AT4G22680.1 45.045 111 58 2 175 283 9 118 1.39e-25 105
Msa0422420 AT5G06100.5 40.876 137 70 4 180 308 34 167 1.54e-25 109
Msa0422420 AT5G06100.2 40.876 137 70 4 180 308 34 167 1.54e-25 109
Msa0422420 AT5G06100.3 40.876 137 70 4 180 308 34 167 1.54e-25 109
Msa0422420 AT5G06100.4 40.876 137 70 4 180 308 34 167 1.54e-25 109
Msa0422420 AT1G57560.1 44.860 107 56 2 180 284 14 119 1.60e-25 106
Msa0422420 AT1G57560.2 44.860 107 56 2 180 284 14 119 1.73e-25 105
Msa0422420 AT4G33450.1 43.651 126 69 1 174 299 13 136 2.07e-25 104
Msa0422420 AT1G09540.1 44.860 107 56 2 180 284 14 119 2.15e-25 107
Msa0422420 AT5G07690.1 48.649 111 54 2 166 275 2 110 2.30e-25 106
Msa0422420 AT5G40330.1 37.681 138 75 3 174 310 8 135 2.51e-25 103
Msa0422420 AT3G27920.1 45.455 99 53 1 178 275 14 112 2.91e-25 103
Msa0422420 AT5G56110.1 45.455 110 59 1 174 282 8 117 3.77e-25 105
Msa0422420 AT5G54230.1 37.989 179 95 5 180 347 14 187 6.60e-25 105
Msa0422420 AT3G12720.1 45.192 104 54 2 180 281 24 126 7.58e-25 104
Msa0422420 AT1G66230.1 43.243 111 60 2 175 283 9 118 9.76e-25 103
Msa0422420 AT4G09460.1 48.039 102 52 1 180 280 14 115 1.00e-24 102
Msa0422420 AT5G35550.1 45.217 115 58 3 180 292 16 127 1.21e-24 102
Msa0422420 AT5G61420.2 44.828 116 61 2 166 280 2 115 1.46e-24 104
Msa0422420 AT3G61250.1 37.736 159 74 4 175 331 9 144 2.99e-24 102
Msa0422420 AT5G60890.1 48.148 108 54 2 180 286 14 120 3.22e-24 102
Msa0422420 AT5G17800.1 42.241 116 67 0 180 295 93 208 3.24e-24 103
Msa0422420 AT4G34990.1 47.222 108 55 2 180 286 14 120 3.33e-24 102
Msa0422420 AT4G12350.1 43.243 111 60 2 175 283 9 118 3.60e-24 102
Msa0422420 AT3G13540.1 36.364 121 76 1 165 284 10 130 4.75e-24 100
Msa0422420 AT5G07700.1 47.059 102 53 1 180 280 14 115 4.87e-24 102
Msa0422420 AT5G07700.2 47.059 102 53 1 180 280 14 115 4.87e-24 102
Msa0422420 AT2G16720.1 47.500 120 57 4 167 283 3 119 4.89e-24 101
Msa0422420 AT1G35515.1 42.017 119 66 2 167 284 3 119 7.78e-24 99.4
Msa0422420 AT1G63910.1 43.810 105 58 1 180 283 14 118 8.84e-24 102
Msa0422420 AT1G17950.1 42.017 119 66 1 180 295 5 123 9.13e-24 100
Msa0422420 AT5G16600.1 38.562 153 82 4 175 316 9 160 9.40e-24 101
Msa0422420 AT1G18570.1 42.105 114 65 1 172 284 7 120 9.48e-24 102
Msa0422420 AT2G47190.1 46.078 102 54 1 180 280 22 123 1.49e-23 100
Msa0422420 AT3G27810.1 33.133 166 91 2 180 344 22 168 1.70e-23 98.6
Msa0422420 AT3G23250.1 41.667 108 62 1 174 280 8 115 2.11e-23 100
Msa0422420 AT3G24310.1 45.946 111 52 3 180 288 20 124 2.12e-23 99.8
Msa0422420 AT5G26660.2 37.879 132 79 2 213 344 17 145 2.33e-23 100
Msa0422420 AT5G16770.4 46.078 102 54 1 180 280 14 115 2.68e-23 100
Msa0422420 AT5G16770.3 46.078 102 54 1 180 280 14 115 2.68e-23 100
Msa0422420 AT5G16770.1 46.078 102 54 1 180 280 14 115 3.69e-23 100
Msa0422420 AT5G16770.2 46.078 102 54 1 180 280 14 115 3.69e-23 100
Msa0422420 AT4G13480.1 40.496 121 69 2 180 298 8 127 3.95e-23 98.6
Msa0422420 AT4G01680.1 41.509 106 61 1 180 284 14 119 4.14e-23 100
Msa0422420 AT1G06180.1 42.149 121 63 4 167 283 3 120 4.29e-23 98.2
Msa0422420 AT5G10280.1 45.631 103 53 2 180 280 14 115 4.65e-23 100
Msa0422420 AT3G08500.1 44.118 102 56 1 180 280 32 133 4.89e-23 100
Msa0422420 AT4G01680.3 41.509 106 61 1 180 284 14 119 5.19e-23 97.8
Msa0422420 AT1G74080.1 40.602 133 77 2 180 311 14 145 6.06e-23 99.8
Msa0422420 AT3G13890.2 41.176 102 59 1 180 280 14 115 7.83e-23 99.8
Msa0422420 AT3G02940.2 45.098 102 55 1 180 280 14 115 8.73e-23 98.6
Msa0422420 AT3G30210.1 45.370 108 57 2 180 285 29 136 8.82e-23 97.8
Msa0422420 AT1G73410.1 46.729 107 54 1 180 283 6 112 1.07e-22 97.1
Msa0422420 AT5G62320.1 33.854 192 113 5 165 347 2 188 1.24e-22 96.7
Msa0422420 AT5G65230.1 45.631 103 53 2 180 280 14 115 1.34e-22 98.2
Msa0422420 AT3G02940.1 45.098 102 55 1 180 280 14 115 1.59e-22 98.2
Msa0422420 AT3G02940.3 45.098 102 55 1 180 280 14 115 1.59e-22 98.2
Msa0422420 AT5G40350.1 41.818 110 62 2 180 288 19 127 1.90e-22 95.5
Msa0422420 AT1G68320.1 42.157 102 58 1 180 280 21 122 2.19e-22 97.1
Msa0422420 AT1G73410.2 46.729 107 54 1 180 283 6 112 2.22e-22 95.1
Msa0422420 AT3G62610.1 41.667 108 62 1 174 280 8 115 2.42e-22 98.2
Msa0422420 AT5G14340.1 32.864 213 112 8 167 374 15 201 3.64e-22 96.3
Msa0422420 AT3G13890.1 39.640 111 57 1 180 280 14 124 4.32e-22 97.8
Msa0422420 AT2G31180.1 39.640 111 66 1 174 283 8 118 4.37e-22 95.5
Msa0422420 AT3G01530.1 44.118 102 56 1 180 280 27 128 4.48e-22 94.4
Msa0422420 AT5G15310.1 41.818 110 63 1 175 283 9 118 4.53e-22 97.1
Msa0422420 AT1G25340.1 38.346 133 62 2 180 311 20 133 4.58e-22 96.3
Msa0422420 AT5G62470.1 40.909 110 65 0 174 283 8 117 4.87e-22 97.4
Msa0422420 AT5G15310.2 41.818 110 63 1 175 283 9 118 4.90e-22 96.7
Msa0422420 AT3G60460.1 44.348 115 60 3 167 279 2 114 5.12e-22 96.3
Msa0422420 AT4G17785.2 43.689 103 55 2 180 280 15 116 5.37e-22 97.1
Msa0422420 AT4G17785.1 43.689 103 55 2 180 280 15 116 5.71e-22 97.4
Msa0422420 AT5G15310.4 41.818 110 63 1 175 283 9 118 6.85e-22 94.7
Msa0422420 AT1G66370.1 40.870 115 59 2 180 289 10 120 8.49e-22 94.4
Msa0422420 AT1G18710.1 42.593 108 60 2 180 286 14 120 8.51e-22 95.1
Msa0422420 AT5G59780.3 40.909 110 62 2 178 285 8 116 1.05e-21 94.0
Msa0422420 AT4G01680.2 38.983 118 59 2 180 284 14 131 1.14e-21 96.3
Msa0422420 AT3G01140.2 41.818 110 63 1 175 283 9 118 1.33e-21 95.9
Msa0422420 AT1G56160.1 39.831 118 66 3 167 282 5 119 1.34e-21 95.1
Msa0422420 AT1G48000.1 42.202 109 61 2 176 283 30 137 1.41e-21 94.0
Msa0422420 AT3G01140.1 41.818 110 63 1 175 283 52 161 1.58e-21 96.3
Msa0422420 AT3G53200.1 42.623 122 63 3 173 292 4 120 1.68e-21 93.6
Msa0422420 AT3G46130.1 42.593 108 59 2 180 285 11 117 1.70e-21 94.0
Msa0422420 AT1G25340.2 37.879 132 59 2 180 311 20 128 1.79e-21 94.4
Msa0422420 AT5G52600.1 41.121 107 62 1 180 285 14 120 2.18e-21 92.0
Msa0422420 AT1G66380.1 44.860 107 50 2 180 281 10 112 2.32e-21 90.1
Msa0422420 AT1G25340.3 37.879 132 59 2 180 311 20 128 3.53e-21 94.0
Msa0422420 AT1G08810.1 42.727 110 62 1 175 283 9 118 4.74e-21 93.2
Msa0422420 AT2G47460.1 39.815 108 64 1 174 280 8 115 5.24e-21 94.7
Msa0422420 AT1G34670.1 43.137 102 57 1 180 280 14 115 7.03e-21 94.4
Msa0422420 AT4G37780.1 37.069 116 71 2 175 288 9 124 7.22e-21 93.2
Msa0422420 AT3G47600.1 40.909 110 64 1 175 283 9 118 7.46e-21 93.6
Msa0422420 AT3G48920.1 43.564 101 56 1 180 279 20 120 1.20e-20 91.7
Msa0422420 AT5G39700.1 38.281 128 77 1 159 286 37 162 1.46e-20 89.7
Msa0422420 AT5G62470.2 40.541 111 65 1 174 283 8 118 1.56e-20 92.8
Msa0422420 AT1G16490.1 39.450 109 65 1 175 282 11 119 1.67e-20 91.7
Msa0422420 AT4G25560.1 39.815 108 64 1 180 286 12 119 2.14e-20 91.3
Msa0422420 AT1G79180.1 37.288 118 73 1 175 291 11 128 2.30e-20 91.7
Msa0422420 AT5G49330.1 39.815 108 64 1 174 280 8 115 3.39e-20 91.7
Msa0422420 AT1G74650.1 40.741 108 63 1 174 280 8 115 4.73e-20 91.3
Msa0422420 AT5G49620.1 39.130 115 68 2 171 284 19 132 5.57e-20 90.5
Msa0422420 AT3G28910.1 41.905 105 60 1 180 283 14 118 8.33e-20 90.5
Msa0422420 AT5G65790.1 39.062 128 75 3 175 300 9 135 8.88e-20 90.9
Msa0422420 AT5G57620.1 40.708 113 65 2 175 285 9 121 1.38e-19 89.7
Msa0422420 AT5G35550.2 48.750 80 39 1 213 292 53 130 2.52e-19 87.8
Msa0422420 AT5G14750.3 39.326 89 52 1 210 296 13 101 4.18e-19 84.7
Msa0422420 AT3G49690.1 41.667 108 61 2 175 280 9 116 7.33e-19 87.4
Msa0422420 AT1G56650.1 46.535 101 45 2 180 275 10 106 8.18e-19 85.9
Msa0422420 AT1G14350.2 38.776 98 60 0 183 280 28 125 1.30e-18 88.2
Msa0422420 AT1G14350.1 38.776 98 60 0 183 280 28 125 1.30e-18 88.2
Msa0422420 AT5G52260.1 41.071 112 63 2 180 289 14 124 1.88e-18 85.5
Msa0422420 AT5G23000.1 41.026 117 63 3 167 280 3 116 2.04e-18 86.3
Msa0422420 AT3G12820.1 39.252 107 62 2 180 284 16 121 3.22e-18 84.0
Msa0422420 AT2G02820.3 41.111 90 53 0 183 272 33 122 7.67e-18 84.7
Msa0422420 AT2G02820.2 39.785 93 56 0 183 275 33 125 1.13e-17 85.5
Msa0422420 AT2G02820.1 39.785 93 56 0 183 275 33 125 1.23e-17 85.5
Msa0422420 AT1G66390.1 45.545 101 46 2 180 275 10 106 2.40e-17 82.0
Msa0422420 AT3G06490.1 35.537 121 74 3 166 284 7 125 2.88e-17 82.8
Msa0422420 AT1G79180.2 44.304 79 44 0 213 291 83 161 5.08e-17 82.4
Msa0422420 AT5G49620.2 34.884 129 68 3 171 284 19 146 8.66e-17 81.6
Msa0422420 AT3G27810.2 32.576 132 70 1 213 344 7 119 8.70e-17 78.6
Msa0422420 AT3G53200.2 47.500 80 38 1 213 292 12 87 1.96e-16 78.2
Msa0422420 AT2G36890.1 38.889 108 64 2 175 280 9 116 2.03e-16 80.1
Msa0422420 AT2G36890.2 38.889 108 64 2 175 280 50 157 3.50e-16 80.1
Msa0422420 AT3G12820.2 45.833 72 39 0 213 284 2 73 5.23e-16 76.6
Msa0422420 AT2G37630.1 42.056 107 59 2 182 285 6 112 5.98e-16 79.7
Msa0422420 AT3G18100.1 40.426 94 56 0 180 273 546 639 9.24e-16 80.5
Msa0422420 AT3G18100.1 29.032 155 102 4 120 273 441 588 1.15e-12 70.9
Msa0422420 AT5G40350.2 44.737 76 41 1 213 288 8 82 1.11e-15 75.1
Msa0422420 AT3G18100.3 40.426 94 56 0 180 273 498 591 1.18e-15 80.1
Msa0422420 AT3G18100.3 29.032 155 102 4 120 273 393 540 1.18e-12 70.5
Msa0422420 AT3G18100.4 40.426 94 56 0 180 273 385 478 1.77e-15 79.3
Msa0422420 AT3G18100.4 29.032 155 102 4 120 273 280 427 2.79e-12 69.3
Msa0422420 AT3G18100.2 40.426 94 56 0 180 273 333 426 1.95e-15 79.0
Msa0422420 AT3G18100.2 29.032 155 102 4 120 273 228 375 3.29e-12 68.9
Msa0422420 AT5G59780.2 41.096 73 43 0 213 285 23 95 2.05e-15 75.5
Msa0422420 AT1G22640.3 52.459 61 29 0 224 284 2 62 5.79e-15 73.9
Msa0422420 AT3G46130.4 41.096 73 43 0 213 285 23 95 6.03e-15 74.7
Msa0422420 AT3G46130.3 41.096 73 43 0 213 285 13 85 6.72e-15 74.3
Msa0422420 AT1G71030.2 41.176 68 40 0 216 283 5 72 3.41e-14 71.2
Msa0422420 AT1G71030.1 41.176 68 40 0 216 283 19 86 3.65e-14 71.2
Msa0422420 AT3G47600.2 36.842 95 49 1 189 283 29 112 3.76e-14 73.6
Msa0422420 AT5G14750.4 31.683 101 64 2 224 324 2 97 9.96e-14 68.6
Msa0422420 AT5G14750.2 31.683 101 64 2 224 324 2 97 9.96e-14 68.6
Msa0422420 AT1G66380.3 50.794 63 31 0 213 275 11 73 5.14e-13 65.5
Msa0422420 AT3G23250.2 45.614 57 31 0 224 280 2 58 1.93e-11 64.3

Find 70 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAAATGGAAAATAATTT+TGG 0.166549 3_2:-71723663 None:intergenic
GTTATGGATAATTTCTTATA+TGG 0.202096 3_2:+71723577 Msa0422420:CDS
AAGAAGATCAACTTTATAAA+AGG 0.205425 3_2:+71723829 Msa0422420:CDS
GTTTCTTGAGAAATATTAAA+TGG 0.212262 3_2:-71723676 None:intergenic
GATGAGAATTTGTTTCAAAA+TGG 0.230233 3_2:+71725027 Msa0422420:CDS
CTTTGATCTACCCTTTCTTT+TGG 0.231362 3_2:-71724782 None:intergenic
AATTTCTTATATGGAGGTTA+TGG 0.273864 3_2:+71723586 Msa0422420:CDS
AGAAATGCCACTAGATATTA+TGG 0.284041 3_2:+71725137 Msa0422420:CDS
TCATCTAAAGCCTGACATTA+AGG 0.317779 3_2:+71724141 Msa0422420:CDS
GAGAACATGGTTTGAGAAAA+TGG 0.322172 3_2:+71724056 Msa0422420:CDS
TAAGAAGGAGATGGATTTGA+TGG 0.326017 3_2:+71725182 Msa0422420:CDS
TTTGTAGAAGAGTTCCTTTA+GGG 0.335398 3_2:-71724807 None:intergenic
TGGCATGAACAGAAATAATA+AGG 0.340684 3_2:+71723768 Msa0422420:CDS
TGCTGAAGCTGATCAAATTA+TGG 0.373684 3_2:+71725086 Msa0422420:CDS
TTCTCTTTGTTGCATTCCAA+TGG 0.381694 3_2:-71724750 None:intergenic
CCCGGAAACAGGATTGAAAA+AGG 0.389806 3_2:-71723458 None:intergenic
ATGAGAATTTGTTTCAAAAT+GGG 0.396459 3_2:+71725028 Msa0422420:CDS
GGAGTGGTTCCTTCATCTCA+TGG 0.406341 3_2:+71723385 Msa0422420:CDS
AAACAGGTTGTTGGTTCAGC+TGG 0.412723 3_2:+71724030 Msa0422420:intron
GAGAATTTGCCTGGTAGAAT+AGG 0.417263 3_2:+71724091 Msa0422420:CDS
AATGGGCGGAGATAGCTAAA+AGG 0.422785 3_2:+71724695 Msa0422420:CDS
ACAGAAAACAATAGTGGTAA+TGG 0.423598 3_2:+71723544 Msa0422420:CDS
GAAATTATGATGAACATCAT+AGG 0.428182 3_2:-71723512 None:intergenic
TCAGGCTTTCTAGAGGCATA+AGG 0.428609 3_2:-71723796 None:intergenic
ATGAAGAGATAGGAAACAAA+TGG 0.432519 3_2:+71724677 Msa0422420:CDS
GTTCAGCTGGTTGGAGAACA+TGG 0.436361 3_2:+71724043 Msa0422420:CDS
GGAGATGGATTTGATGGAGA+TGG 0.438443 3_2:+71725188 Msa0422420:CDS
TTTGATTATTCCTTTGAGAA+AGG 0.439027 3_2:-71723621 None:intergenic
GAATAATCAAATGGAAATGA+TGG 0.445628 3_2:+71723633 Msa0422420:CDS
CCTTATTGCAGAAGGACATA+TGG 0.449990 3_2:+71724620 Msa0422420:intron
AAGACAATACTCCAAAAGAA+AGG 0.464183 3_2:+71724771 Msa0422420:CDS
TAAGAATTCACCTTAATGTC+AGG 0.466977 3_2:-71724151 None:intergenic
AGAAGATCAACTTTATAAAA+GGG 0.467069 3_2:+71723830 Msa0422420:CDS
TAATGGTCATGCTTATGTTA+TGG 0.467483 3_2:+71723561 Msa0422420:CDS
GGACATATGGAGTGAGGAAG+AGG 0.467712 3_2:+71724633 Msa0422420:CDS
CATATTGCTGAGAATTTGCC+TGG 0.468585 3_2:+71724082 Msa0422420:CDS
ATCAAAGCACATGAAGAGAT+AGG 0.469111 3_2:+71724667 Msa0422420:CDS
TTCTCAAAGGAATAATCAAA+TGG 0.473969 3_2:+71723624 Msa0422420:CDS
GTGAATTATTACAAAAGAGT+TGG 0.476372 3_2:+71723748 Msa0422420:CDS
TACAACACTATTCAAAGGCT+TGG 0.480870 3_2:-71723698 None:intergenic
TGGTACCAAACACTGATCAT+TGG 0.481846 3_2:-71724968 None:intergenic
GGTACCAAACACTGATCATT+GGG 0.487787 3_2:-71724967 None:intergenic
TGAAAGAATCCATGAGATGA+AGG 0.488924 3_2:-71723394 None:intergenic
GATATGCATGAGACTTCATC+TGG 0.491162 3_2:-71723721 None:intergenic
GCTTGGAGTTGAAGTTAAGA+AGG 0.493540 3_2:+71725167 Msa0422420:CDS
GATGAAGGAACCACTCCAAA+AGG 0.497596 3_2:-71723379 None:intergenic
AGTTGAAGTTAAGAAGGAGA+TGG 0.502240 3_2:+71725173 Msa0422420:CDS
TTCTTCTATAATCTTTGGGA+GGG 0.503404 3_2:-71724861 None:intergenic
CTTGGTAATGACATCAACAT+TGG 0.506271 3_2:+71725249 Msa0422420:CDS
TTTCTTCTATAATCTTTGGG+AGG 0.507727 3_2:-71724862 None:intergenic
ATGGATAATTTCTTATATGG+AGG 0.512418 3_2:+71723580 Msa0422420:CDS
GATATTATGGAATCTATGCT+TGG 0.512953 3_2:+71725150 Msa0422420:CDS
GGATATTGTTGTGCTTCTGT+TGG 0.528317 3_2:-71724914 None:intergenic
GGTAGATCAAAGTACCCTAA+AGG 0.542452 3_2:+71724793 Msa0422420:CDS
AGGTTGTTGGTTCAGCTGGT+TGG 0.546665 3_2:+71724034 Msa0422420:intron
AGACAATACTCCAAAAGAAA+GGG 0.551275 3_2:+71724772 Msa0422420:CDS
TGAAGAGATAGGAAACAAAT+GGG 0.553849 3_2:+71724678 Msa0422420:CDS
TCTGGTACAACACTATTCAA+AGG 0.554355 3_2:-71723703 None:intergenic
AACTTTCTCAGGCTTTCTAG+AGG 0.574016 3_2:-71723803 None:intergenic
GAGATAGCTAAAAGGTTACC+AGG 0.574186 3_2:+71724703 Msa0422420:CDS
TTCAGTTTGTTGAGACTGAG+AGG 0.582327 3_2:-71724935 None:intergenic
GAAGCTGATCAAATTATGGA+AGG 0.586708 3_2:+71725090 Msa0422420:CDS
ACATCATCAAAATCACAAGT+TGG 0.586726 3_2:-71724988 None:intergenic
TCAACTTTATAAAAGGGCAA+TGG 0.588167 3_2:+71723836 Msa0422420:CDS
TGAACAACAACCTTTCTCAA+AGG 0.590258 3_2:+71723611 Msa0422420:CDS
GAAAACAATGCAGAGAGAGA+TGG 0.604304 3_2:+71724113 Msa0422420:CDS
AATGGACAGTAGAAGAAGAT+CGG 0.617069 3_2:+71723854 Msa0422420:CDS
ATAGATTCCATAATATCTAG+TGG 0.637129 3_2:-71725144 None:intergenic
GCAGAAGGACATATGGAGTG+AGG 0.656245 3_2:+71724627 Msa0422420:intron
AGAGATAGGAAACAAATGGG+CGG 0.736615 3_2:+71724681 Msa0422420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAATGGAAAATAATTT+TGG - chr3_2:71723666-71723685 None:intergenic 10.0%
!!! TATTAAATGGAAAATAATTT+TGG - chr3_2:71723666-71723685 None:intergenic 10.0%
!!! TTCTCATAATTTTTTATGTT+GGG - chr3_2:71723358-71723377 None:intergenic 15.0%
!!! ATTCTCATAATTTTTTATGT+TGG - chr3_2:71723359-71723378 None:intergenic 15.0%
!!! AAAAAAAAAGTACCTATAAA+AGG - chr3_2:71723956-71723975 None:intergenic 15.0%
!!! TACTTTTTTTTTTACCAATT+TGG + chr3_2:71723964-71723983 Msa0422420:intron 15.0%
!!! AAAAAGTACAAATAATATTG+TGG + chr3_2:71724353-71724372 Msa0422420:intron 15.0%
!!! TTCTCATAATTTTTTATGTT+GGG - chr3_2:71723358-71723377 None:intergenic 15.0%
!!! ATTCTCATAATTTTTTATGT+TGG - chr3_2:71723359-71723378 None:intergenic 15.0%
!!! AAAAAAAAAGTACCTATAAA+AGG - chr3_2:71723956-71723975 None:intergenic 15.0%
!!! TACTTTTTTTTTTACCAATT+TGG + chr3_2:71723964-71723983 Msa0422420:intron 15.0%
!!! AAAAAGTACAAATAATATTG+TGG + chr3_2:71724353-71724372 Msa0422420:intron 15.0%
!!! AAAAATTATGAGAATCCTTT+TGG + chr3_2:71723364-71723383 Msa0422420:CDS 20.0%
!! GTTATGGATAATTTCTTATA+TGG + chr3_2:71723577-71723596 Msa0422420:CDS 20.0%
!! GTTTCTTGAGAAATATTAAA+TGG - chr3_2:71723679-71723698 None:intergenic 20.0%
!! AAGAAGATCAACTTTATAAA+AGG + chr3_2:71723829-71723848 Msa0422420:CDS 20.0%
!! AGAAGATCAACTTTATAAAA+GGG + chr3_2:71723830-71723849 Msa0422420:CDS 20.0%
!! TTTAGATCAAAATTCCAAAT+TGG - chr3_2:71723981-71724000 None:intergenic 20.0%
!!! TTTGGAATTTTGATCTAAAA+AGG + chr3_2:71723982-71724001 Msa0422420:intron 20.0%
!!! ATGAGAATTTGTTTCAAAAT+GGG + chr3_2:71725028-71725047 Msa0422420:CDS 20.0%
!!! AAAAATTATGAGAATCCTTT+TGG + chr3_2:71723364-71723383 Msa0422420:CDS 20.0%
!! GTTATGGATAATTTCTTATA+TGG + chr3_2:71723577-71723596 Msa0422420:CDS 20.0%
!! GTTTCTTGAGAAATATTAAA+TGG - chr3_2:71723679-71723698 None:intergenic 20.0%
!! AAGAAGATCAACTTTATAAA+AGG + chr3_2:71723829-71723848 Msa0422420:CDS 20.0%
!! AGAAGATCAACTTTATAAAA+GGG + chr3_2:71723830-71723849 Msa0422420:CDS 20.0%
!! TTTAGATCAAAATTCCAAAT+TGG - chr3_2:71723981-71724000 None:intergenic 20.0%
!!! TTTGGAATTTTGATCTAAAA+AGG + chr3_2:71723982-71724001 Msa0422420:intron 20.0%
!!! ATGAGAATTTGTTTCAAAAT+GGG + chr3_2:71725028-71725047 Msa0422420:CDS 20.0%
! GAAATTATGATGAACATCAT+AGG - chr3_2:71723515-71723534 None:intergenic 25.0%
!! TCTTTTACAGAAAACAATAG+TGG + chr3_2:71723538-71723557 Msa0422420:CDS 25.0%
! ATGGATAATTTCTTATATGG+AGG + chr3_2:71723580-71723599 Msa0422420:CDS 25.0%
! AATTTCTTATATGGAGGTTA+TGG + chr3_2:71723586-71723605 Msa0422420:CDS 25.0%
!! TTTGATTATTCCTTTGAGAA+AGG - chr3_2:71723624-71723643 None:intergenic 25.0%
! TTCTCAAAGGAATAATCAAA+TGG + chr3_2:71723624-71723643 Msa0422420:CDS 25.0%
! GAATAATCAAATGGAAATGA+TGG + chr3_2:71723633-71723652 Msa0422420:CDS 25.0%
!! TCTTTTGTAATAATTCACTG+AGG - chr3_2:71723746-71723765 None:intergenic 25.0%
! GTGAATTATTACAAAAGAGT+TGG + chr3_2:71723748-71723767 Msa0422420:CDS 25.0%
!!! ATCTTCTTTTTAACTTTCTC+AGG - chr3_2:71723817-71723836 None:intergenic 25.0%
! TAATAAATCTTCGTTGAAGT+TGG + chr3_2:71724280-71724299 Msa0422420:intron 25.0%
! TGTTTGCAATAAGATGTTTA+AGG + chr3_2:71724393-71724412 Msa0422420:intron 25.0%
!!! TACTTCACATTTCTTGTTTT+TGG + chr3_2:71724422-71724441 Msa0422420:intron 25.0%
! AAAACTCAATCAAAAACCAT+TGG + chr3_2:71724734-71724753 Msa0422420:CDS 25.0%
!! GGTTTTCTTCTATAATCTTT+GGG - chr3_2:71724868-71724887 None:intergenic 25.0%
!! AGGTTTTCTTCTATAATCTT+TGG - chr3_2:71724869-71724888 None:intergenic 25.0%
!!! TTTTTTATAGCATTAGCTGA+AGG - chr3_2:71724889-71724908 None:intergenic 25.0%
!! GATGAGAATTTGTTTCAAAA+TGG + chr3_2:71725027-71725046 Msa0422420:CDS 25.0%
! ATAGATTCCATAATATCTAG+TGG - chr3_2:71725147-71725166 None:intergenic 25.0%
! GAAATTATGATGAACATCAT+AGG - chr3_2:71723515-71723534 None:intergenic 25.0%
!! TCTTTTACAGAAAACAATAG+TGG + chr3_2:71723538-71723557 Msa0422420:CDS 25.0%
! ATGGATAATTTCTTATATGG+AGG + chr3_2:71723580-71723599 Msa0422420:CDS 25.0%
! AATTTCTTATATGGAGGTTA+TGG + chr3_2:71723586-71723605 Msa0422420:CDS 25.0%
!! TTTGATTATTCCTTTGAGAA+AGG - chr3_2:71723624-71723643 None:intergenic 25.0%
! TTCTCAAAGGAATAATCAAA+TGG + chr3_2:71723624-71723643 Msa0422420:CDS 25.0%
! GAATAATCAAATGGAAATGA+TGG + chr3_2:71723633-71723652 Msa0422420:CDS 25.0%
!! TCTTTTGTAATAATTCACTG+AGG - chr3_2:71723746-71723765 None:intergenic 25.0%
! GTGAATTATTACAAAAGAGT+TGG + chr3_2:71723748-71723767 Msa0422420:CDS 25.0%
!!! ATCTTCTTTTTAACTTTCTC+AGG - chr3_2:71723817-71723836 None:intergenic 25.0%
! TAATAAATCTTCGTTGAAGT+TGG + chr3_2:71724280-71724299 Msa0422420:intron 25.0%
! TGTTTGCAATAAGATGTTTA+AGG + chr3_2:71724393-71724412 Msa0422420:intron 25.0%
!!! TACTTCACATTTCTTGTTTT+TGG + chr3_2:71724422-71724441 Msa0422420:intron 25.0%
! AAAACTCAATCAAAAACCAT+TGG + chr3_2:71724734-71724753 Msa0422420:CDS 25.0%
!! GGTTTTCTTCTATAATCTTT+GGG - chr3_2:71724868-71724887 None:intergenic 25.0%
!! AGGTTTTCTTCTATAATCTT+TGG - chr3_2:71724869-71724888 None:intergenic 25.0%
!!! TTTTTTATAGCATTAGCTGA+AGG - chr3_2:71724889-71724908 None:intergenic 25.0%
!! GATGAGAATTTGTTTCAAAA+TGG + chr3_2:71725027-71725046 Msa0422420:CDS 25.0%
! ATAGATTCCATAATATCTAG+TGG - chr3_2:71725147-71725166 None:intergenic 25.0%
! TTTTTATGTTGGGTTTCAAG+TGG - chr3_2:71723348-71723367 None:intergenic 30.0%
! AAGATCAAAATTTTTGACCC+CGG - chr3_2:71723479-71723498 None:intergenic 30.0%
ACAGAAAACAATAGTGGTAA+TGG + chr3_2:71723544-71723563 Msa0422420:CDS 30.0%
TAATGGTCATGCTTATGTTA+TGG + chr3_2:71723561-71723580 Msa0422420:CDS 30.0%
TGGCATGAACAGAAATAATA+AGG + chr3_2:71723768-71723787 Msa0422420:CDS 30.0%
TCAACTTTATAAAAGGGCAA+TGG + chr3_2:71723836-71723855 Msa0422420:CDS 30.0%
!! GTGACTGTTTTTCCTTTTAT+AGG + chr3_2:71723941-71723960 Msa0422420:intron 30.0%
TAAGAATTCACCTTAATGTC+AGG - chr3_2:71724154-71724173 None:intergenic 30.0%
! GATGAGACATACATTTGTTA+GGG - chr3_2:71724313-71724332 None:intergenic 30.0%
AGATGAGACATACATTTGTT+AGG - chr3_2:71724314-71724333 None:intergenic 30.0%
TATTGCAAACACATGTGTAT+CGG - chr3_2:71724384-71724403 None:intergenic 30.0%
! TGCAATAAGATGTTTAAGGT+AGG + chr3_2:71724397-71724416 Msa0422420:intron 30.0%
ATGAAGAGATAGGAAACAAA+TGG + chr3_2:71724677-71724696 Msa0422420:CDS 30.0%
TGAAGAGATAGGAAACAAAT+GGG + chr3_2:71724678-71724697 Msa0422420:CDS 30.0%
AAGACAATACTCCAAAAGAA+AGG + chr3_2:71724771-71724790 Msa0422420:CDS 30.0%
AGACAATACTCCAAAAGAAA+GGG + chr3_2:71724772-71724791 Msa0422420:CDS 30.0%
TTTGTAGAAGAGTTCCTTTA+GGG - chr3_2:71724810-71724829 None:intergenic 30.0%
! TTTTGTAGAAGAGTTCCTTT+AGG - chr3_2:71724811-71724830 None:intergenic 30.0%
! TTCTTCTATAATCTTTGGGA+GGG - chr3_2:71724864-71724883 None:intergenic 30.0%
TTTCTTCTATAATCTTTGGG+AGG - chr3_2:71724865-71724884 None:intergenic 30.0%
ACATCATCAAAATCACAAGT+TGG - chr3_2:71724991-71725010 None:intergenic 30.0%
TTCTCATCGAAAGAAAAATC+CGG - chr3_2:71725015-71725034 None:intergenic 30.0%
AGAAATGCCACTAGATATTA+TGG + chr3_2:71725137-71725156 Msa0422420:CDS 30.0%
GATATTATGGAATCTATGCT+TGG + chr3_2:71725150-71725169 Msa0422420:CDS 30.0%
! TTTTTATGTTGGGTTTCAAG+TGG - chr3_2:71723348-71723367 None:intergenic 30.0%
! AAGATCAAAATTTTTGACCC+CGG - chr3_2:71723479-71723498 None:intergenic 30.0%
ACAGAAAACAATAGTGGTAA+TGG + chr3_2:71723544-71723563 Msa0422420:CDS 30.0%
TAATGGTCATGCTTATGTTA+TGG + chr3_2:71723561-71723580 Msa0422420:CDS 30.0%
TGGCATGAACAGAAATAATA+AGG + chr3_2:71723768-71723787 Msa0422420:CDS 30.0%
TCAACTTTATAAAAGGGCAA+TGG + chr3_2:71723836-71723855 Msa0422420:CDS 30.0%
!! GTGACTGTTTTTCCTTTTAT+AGG + chr3_2:71723941-71723960 Msa0422420:intron 30.0%
TAAGAATTCACCTTAATGTC+AGG - chr3_2:71724154-71724173 None:intergenic 30.0%
! GATGAGACATACATTTGTTA+GGG - chr3_2:71724313-71724332 None:intergenic 30.0%
AGATGAGACATACATTTGTT+AGG - chr3_2:71724314-71724333 None:intergenic 30.0%
TATTGCAAACACATGTGTAT+CGG - chr3_2:71724384-71724403 None:intergenic 30.0%
! TGCAATAAGATGTTTAAGGT+AGG + chr3_2:71724397-71724416 Msa0422420:intron 30.0%
ATGAAGAGATAGGAAACAAA+TGG + chr3_2:71724677-71724696 Msa0422420:CDS 30.0%
TGAAGAGATAGGAAACAAAT+GGG + chr3_2:71724678-71724697 Msa0422420:CDS 30.0%
AAGACAATACTCCAAAAGAA+AGG + chr3_2:71724771-71724790 Msa0422420:CDS 30.0%
AGACAATACTCCAAAAGAAA+GGG + chr3_2:71724772-71724791 Msa0422420:CDS 30.0%
TTTGTAGAAGAGTTCCTTTA+GGG - chr3_2:71724810-71724829 None:intergenic 30.0%
! TTTTGTAGAAGAGTTCCTTT+AGG - chr3_2:71724811-71724830 None:intergenic 30.0%
! TTCTTCTATAATCTTTGGGA+GGG - chr3_2:71724864-71724883 None:intergenic 30.0%
TTTCTTCTATAATCTTTGGG+AGG - chr3_2:71724865-71724884 None:intergenic 30.0%
ACATCATCAAAATCACAAGT+TGG - chr3_2:71724991-71725010 None:intergenic 30.0%
TTCTCATCGAAAGAAAAATC+CGG - chr3_2:71725015-71725034 None:intergenic 30.0%
AGAAATGCCACTAGATATTA+TGG + chr3_2:71725137-71725156 Msa0422420:CDS 30.0%
GATATTATGGAATCTATGCT+TGG + chr3_2:71725150-71725169 Msa0422420:CDS 30.0%
!! TTATGAGAATCCTTTTGGAG+TGG + chr3_2:71723369-71723388 Msa0422420:CDS 35.0%
TGAAAGAATCCATGAGATGA+AGG - chr3_2:71723397-71723416 None:intergenic 35.0%
!!! ACCTTTTTCAATCCTGTTTC+CGG + chr3_2:71723457-71723476 Msa0422420:CDS 35.0%
TGAACAACAACCTTTCTCAA+AGG + chr3_2:71723611-71723630 Msa0422420:CDS 35.0%
TACAACACTATTCAAAGGCT+TGG - chr3_2:71723701-71723720 None:intergenic 35.0%
TCTGGTACAACACTATTCAA+AGG - chr3_2:71723706-71723725 None:intergenic 35.0%
AATGGACAGTAGAAGAAGAT+CGG + chr3_2:71723854-71723873 Msa0422420:CDS 35.0%
ATATGTGTGCATGCAAAAAC+AGG + chr3_2:71724014-71724033 Msa0422420:intron 35.0%
GAGAACATGGTTTGAGAAAA+TGG + chr3_2:71724056-71724075 Msa0422420:CDS 35.0%
! CATTGTTTTCCTATTCTACC+AGG - chr3_2:71724103-71724122 None:intergenic 35.0%
! TCATCTAAAGCCTGACATTA+AGG + chr3_2:71724141-71724160 Msa0422420:CDS 35.0%
CAAATTTGACATTCTCCCTT+CGG + chr3_2:71724237-71724256 Msa0422420:intron 35.0%
CTTCTTTATAGTCTACCGAA+GGG - chr3_2:71724255-71724274 None:intergenic 35.0%
ACTTCTTTATAGTCTACCGA+AGG - chr3_2:71724256-71724275 None:intergenic 35.0%
TAAATCTTCGTTGAAGTTGG+TGG + chr3_2:71724283-71724302 Msa0422420:intron 35.0%
ATCAAAGCACATGAAGAGAT+AGG + chr3_2:71724667-71724686 Msa0422420:CDS 35.0%
! ATTGAGTTTTCAGTTCTTCC+TGG - chr3_2:71724724-71724743 None:intergenic 35.0%
TTCTCTTTGTTGCATTCCAA+TGG - chr3_2:71724753-71724772 None:intergenic 35.0%
! CTTTGATCTACCCTTTCTTT+TGG - chr3_2:71724785-71724804 None:intergenic 35.0%
! TTTTCCCAATGATCAGTGTT+TGG + chr3_2:71724963-71724982 Msa0422420:CDS 35.0%
!!! TTGTGATTTTGATGATGTCC+CGG + chr3_2:71724993-71725012 Msa0422420:CDS 35.0%
TCTCATCGAAAGAAAAATCC+GGG - chr3_2:71725014-71725033 None:intergenic 35.0%
TGCTGAAGCTGATCAAATTA+TGG + chr3_2:71725086-71725105 Msa0422420:CDS 35.0%
GAAGCTGATCAAATTATGGA+AGG + chr3_2:71725090-71725109 Msa0422420:CDS 35.0%
AGTTGAAGTTAAGAAGGAGA+TGG + chr3_2:71725173-71725192 Msa0422420:CDS 35.0%
! TAAGAAGGAGATGGATTTGA+TGG + chr3_2:71725182-71725201 Msa0422420:CDS 35.0%
!!! TTGATGGAGATGGTTTTTTC+AGG + chr3_2:71725198-71725217 Msa0422420:CDS 35.0%
! TCAGGTCAACGAAAATTTTC+AGG + chr3_2:71725216-71725235 Msa0422420:CDS 35.0%
!!! TTTTCAGGTGACTCATATCT+TGG + chr3_2:71725231-71725250 Msa0422420:CDS 35.0%
!! CTTGGTAATGACATCAACAT+TGG + chr3_2:71725249-71725268 Msa0422420:CDS 35.0%
!! TTATGAGAATCCTTTTGGAG+TGG + chr3_2:71723369-71723388 Msa0422420:CDS 35.0%
TGAAAGAATCCATGAGATGA+AGG - chr3_2:71723397-71723416 None:intergenic 35.0%
!!! ACCTTTTTCAATCCTGTTTC+CGG + chr3_2:71723457-71723476 Msa0422420:CDS 35.0%
TGAACAACAACCTTTCTCAA+AGG + chr3_2:71723611-71723630 Msa0422420:CDS 35.0%
TACAACACTATTCAAAGGCT+TGG - chr3_2:71723701-71723720 None:intergenic 35.0%
TCTGGTACAACACTATTCAA+AGG - chr3_2:71723706-71723725 None:intergenic 35.0%
AATGGACAGTAGAAGAAGAT+CGG + chr3_2:71723854-71723873 Msa0422420:CDS 35.0%
ATATGTGTGCATGCAAAAAC+AGG + chr3_2:71724014-71724033 Msa0422420:intron 35.0%
GAGAACATGGTTTGAGAAAA+TGG + chr3_2:71724056-71724075 Msa0422420:CDS 35.0%
! CATTGTTTTCCTATTCTACC+AGG - chr3_2:71724103-71724122 None:intergenic 35.0%
! TCATCTAAAGCCTGACATTA+AGG + chr3_2:71724141-71724160 Msa0422420:CDS 35.0%
CAAATTTGACATTCTCCCTT+CGG + chr3_2:71724237-71724256 Msa0422420:intron 35.0%
CTTCTTTATAGTCTACCGAA+GGG - chr3_2:71724255-71724274 None:intergenic 35.0%
ACTTCTTTATAGTCTACCGA+AGG - chr3_2:71724256-71724275 None:intergenic 35.0%
TAAATCTTCGTTGAAGTTGG+TGG + chr3_2:71724283-71724302 Msa0422420:intron 35.0%
ATCAAAGCACATGAAGAGAT+AGG + chr3_2:71724667-71724686 Msa0422420:CDS 35.0%
! ATTGAGTTTTCAGTTCTTCC+TGG - chr3_2:71724724-71724743 None:intergenic 35.0%
TTCTCTTTGTTGCATTCCAA+TGG - chr3_2:71724753-71724772 None:intergenic 35.0%
! CTTTGATCTACCCTTTCTTT+TGG - chr3_2:71724785-71724804 None:intergenic 35.0%
! TTTTCCCAATGATCAGTGTT+TGG + chr3_2:71724963-71724982 Msa0422420:CDS 35.0%
!!! TTGTGATTTTGATGATGTCC+CGG + chr3_2:71724993-71725012 Msa0422420:CDS 35.0%
TCTCATCGAAAGAAAAATCC+GGG - chr3_2:71725014-71725033 None:intergenic 35.0%
TGCTGAAGCTGATCAAATTA+TGG + chr3_2:71725086-71725105 Msa0422420:CDS 35.0%
GAAGCTGATCAAATTATGGA+AGG + chr3_2:71725090-71725109 Msa0422420:CDS 35.0%
AGTTGAAGTTAAGAAGGAGA+TGG + chr3_2:71725173-71725192 Msa0422420:CDS 35.0%
! TAAGAAGGAGATGGATTTGA+TGG + chr3_2:71725182-71725201 Msa0422420:CDS 35.0%
!!! TTGATGGAGATGGTTTTTTC+AGG + chr3_2:71725198-71725217 Msa0422420:CDS 35.0%
! TCAGGTCAACGAAAATTTTC+AGG + chr3_2:71725216-71725235 Msa0422420:CDS 35.0%
!!! TTTTCAGGTGACTCATATCT+TGG + chr3_2:71725231-71725250 Msa0422420:CDS 35.0%
!! CTTGGTAATGACATCAACAT+TGG + chr3_2:71725249-71725268 Msa0422420:CDS 35.0%
!!! CCTTTTTCAATCCTGTTTCC+GGG + chr3_2:71723458-71723477 Msa0422420:CDS 40.0%
!!! CTTTTTCAATCCTGTTTCCG+GGG + chr3_2:71723459-71723478 Msa0422420:CDS 40.0%
! AAATTTTTGACCCCGGAAAC+AGG - chr3_2:71723472-71723491 None:intergenic 40.0%
GATATGCATGAGACTTCATC+TGG - chr3_2:71723724-71723743 None:intergenic 40.0%
AACTTTCTCAGGCTTTCTAG+AGG - chr3_2:71723806-71723825 None:intergenic 40.0%
TGCATGCAAAAACAGGTTGT+TGG + chr3_2:71724021-71724040 Msa0422420:intron 40.0%
CATATTGCTGAGAATTTGCC+TGG + chr3_2:71724082-71724101 Msa0422420:CDS 40.0%
GAGAATTTGCCTGGTAGAAT+AGG + chr3_2:71724091-71724110 Msa0422420:CDS 40.0%
GAAAACAATGCAGAGAGAGA+TGG + chr3_2:71724113-71724132 Msa0422420:CDS 40.0%
!! TAGCACATTAGCACTGACTT+AGG + chr3_2:71724212-71724231 Msa0422420:intron 40.0%
! ATGTTGTGCCTTATTGCAGA+AGG + chr3_2:71724612-71724631 Msa0422420:intron 40.0%
CCATATGTCCTTCTGCAATA+AGG - chr3_2:71724623-71724642 None:intergenic 40.0%
CCTTATTGCAGAAGGACATA+TGG + chr3_2:71724620-71724639 Msa0422420:intron 40.0%
AGAGATAGGAAACAAATGGG+CGG + chr3_2:71724681-71724700 Msa0422420:CDS 40.0%
GAGATAGCTAAAAGGTTACC+AGG + chr3_2:71724703-71724722 Msa0422420:CDS 40.0%
! GGTAGATCAAAGTACCCTAA+AGG + chr3_2:71724793-71724812 Msa0422420:CDS 40.0%
GGATATTGTTGTGCTTCTGT+TGG - chr3_2:71724917-71724936 None:intergenic 40.0%
!! TTCAGTTTGTTGAGACTGAG+AGG - chr3_2:71724938-71724957 None:intergenic 40.0%
GGTACCAAACACTGATCATT+GGG - chr3_2:71724970-71724989 None:intergenic 40.0%
TGGTACCAAACACTGATCAT+TGG - chr3_2:71724971-71724990 None:intergenic 40.0%
GCTTGGAGTTGAAGTTAAGA+AGG + chr3_2:71725167-71725186 Msa0422420:CDS 40.0%
!!! CCTTTTTCAATCCTGTTTCC+GGG + chr3_2:71723458-71723477 Msa0422420:CDS 40.0%
!!! CTTTTTCAATCCTGTTTCCG+GGG + chr3_2:71723459-71723478 Msa0422420:CDS 40.0%
! AAATTTTTGACCCCGGAAAC+AGG - chr3_2:71723472-71723491 None:intergenic 40.0%
GATATGCATGAGACTTCATC+TGG - chr3_2:71723724-71723743 None:intergenic 40.0%
AACTTTCTCAGGCTTTCTAG+AGG - chr3_2:71723806-71723825 None:intergenic 40.0%
TGCATGCAAAAACAGGTTGT+TGG + chr3_2:71724021-71724040 Msa0422420:intron 40.0%
CATATTGCTGAGAATTTGCC+TGG + chr3_2:71724082-71724101 Msa0422420:CDS 40.0%
GAGAATTTGCCTGGTAGAAT+AGG + chr3_2:71724091-71724110 Msa0422420:CDS 40.0%
GAAAACAATGCAGAGAGAGA+TGG + chr3_2:71724113-71724132 Msa0422420:CDS 40.0%
!! TAGCACATTAGCACTGACTT+AGG + chr3_2:71724212-71724231 Msa0422420:intron 40.0%
! ATGTTGTGCCTTATTGCAGA+AGG + chr3_2:71724612-71724631 Msa0422420:intron 40.0%
CCATATGTCCTTCTGCAATA+AGG - chr3_2:71724623-71724642 None:intergenic 40.0%
CCTTATTGCAGAAGGACATA+TGG + chr3_2:71724620-71724639 Msa0422420:intron 40.0%
AGAGATAGGAAACAAATGGG+CGG + chr3_2:71724681-71724700 Msa0422420:CDS 40.0%
GAGATAGCTAAAAGGTTACC+AGG + chr3_2:71724703-71724722 Msa0422420:CDS 40.0%
! GGTAGATCAAAGTACCCTAA+AGG + chr3_2:71724793-71724812 Msa0422420:CDS 40.0%
GGATATTGTTGTGCTTCTGT+TGG - chr3_2:71724917-71724936 None:intergenic 40.0%
!! TTCAGTTTGTTGAGACTGAG+AGG - chr3_2:71724938-71724957 None:intergenic 40.0%
GGTACCAAACACTGATCATT+GGG - chr3_2:71724970-71724989 None:intergenic 40.0%
TGGTACCAAACACTGATCAT+TGG - chr3_2:71724971-71724990 None:intergenic 40.0%
GCTTGGAGTTGAAGTTAAGA+AGG + chr3_2:71725167-71725186 Msa0422420:CDS 40.0%
GATGAAGGAACCACTCCAAA+AGG - chr3_2:71723382-71723401 None:intergenic 45.0%
CCCGGAAACAGGATTGAAAA+AGG - chr3_2:71723461-71723480 None:intergenic 45.0%
! TCAGGCTTTCTAGAGGCATA+AGG - chr3_2:71723799-71723818 None:intergenic 45.0%
!! AAACAGGTTGTTGGTTCAGC+TGG + chr3_2:71724030-71724049 Msa0422420:intron 45.0%
AATGGGCGGAGATAGCTAAA+AGG + chr3_2:71724695-71724714 Msa0422420:CDS 45.0%
! GGAGATGGATTTGATGGAGA+TGG + chr3_2:71725188-71725207 Msa0422420:CDS 45.0%
GATGAAGGAACCACTCCAAA+AGG - chr3_2:71723382-71723401 None:intergenic 45.0%
CCCGGAAACAGGATTGAAAA+AGG - chr3_2:71723461-71723480 None:intergenic 45.0%
! TCAGGCTTTCTAGAGGCATA+AGG - chr3_2:71723799-71723818 None:intergenic 45.0%
!! AAACAGGTTGTTGGTTCAGC+TGG + chr3_2:71724030-71724049 Msa0422420:intron 45.0%
AATGGGCGGAGATAGCTAAA+AGG + chr3_2:71724695-71724714 Msa0422420:CDS 45.0%
! GGAGATGGATTTGATGGAGA+TGG + chr3_2:71725188-71725207 Msa0422420:CDS 45.0%
GGAGTGGTTCCTTCATCTCA+TGG + chr3_2:71723385-71723404 Msa0422420:CDS 50.0%
!! AGGTTGTTGGTTCAGCTGGT+TGG + chr3_2:71724034-71724053 Msa0422420:intron 50.0%
GTTCAGCTGGTTGGAGAACA+TGG + chr3_2:71724043-71724062 Msa0422420:CDS 50.0%
GCAGAAGGACATATGGAGTG+AGG + chr3_2:71724627-71724646 Msa0422420:intron 50.0%
GGACATATGGAGTGAGGAAG+AGG + chr3_2:71724633-71724652 Msa0422420:CDS 50.0%
GGAGTGGTTCCTTCATCTCA+TGG + chr3_2:71723385-71723404 Msa0422420:CDS 50.0%
!! AGGTTGTTGGTTCAGCTGGT+TGG + chr3_2:71724034-71724053 Msa0422420:intron 50.0%
GTTCAGCTGGTTGGAGAACA+TGG + chr3_2:71724043-71724062 Msa0422420:CDS 50.0%
GCAGAAGGACATATGGAGTG+AGG + chr3_2:71724627-71724646 Msa0422420:intron 50.0%
GGACATATGGAGTGAGGAAG+AGG + chr3_2:71724633-71724652 Msa0422420:CDS 50.0%
!! CTTTGGGAGGGTTTTCGTCG+AGG - chr3_2:71724852-71724871 None:intergenic 55.0%
!! CTTTGGGAGGGTTTTCGTCG+AGG - chr3_2:71724852-71724871 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 71723310 71725278 71723310 ID=Msa0422420;Name=Msa0422420
chr3_2 mRNA 71723310 71725278 71723310 ID=Msa0422420-mRNA-1;Parent=Msa0422420;Name=Msa0422420-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|446
chr3_2 exon 71723310 71723875 71723310 ID=Msa0422420-mRNA-1:exon:17532;Parent=Msa0422420-mRNA-1
chr3_2 exon 71724036 71724162 71724036 ID=Msa0422420-mRNA-1:exon:17533;Parent=Msa0422420-mRNA-1
chr3_2 exon 71724631 71725278 71724631 ID=Msa0422420-mRNA-1:exon:17534;Parent=Msa0422420-mRNA-1
chr3_2 CDS 71723310 71723875 71723310 ID=Msa0422420-mRNA-1:cds;Parent=Msa0422420-mRNA-1
chr3_2 CDS 71724036 71724162 71724036 ID=Msa0422420-mRNA-1:cds;Parent=Msa0422420-mRNA-1
chr3_2 CDS 71724631 71725278 71724631 ID=Msa0422420-mRNA-1:cds;Parent=Msa0422420-mRNA-1
Gene Sequence

>Msa0422420

ATGGATTTTCAGACAAATTTTTTACAAGAAAATTACCACTTGAAACCCAACATAAAAAATTATGAGAATCCTTTTGGAGTGGTTCCTTCATCTCATGGATTCTTTCAAGATTTTAATCACATTGATAAATTTAATGTGAATAGTAGTACCTTTTTCAATCCTGTTTCCGGGGTCAAAAATTTTGATCTTAGTGATAATTTTACCTATGATGTTCATCATAATTTCAAGTCTTTTACAGAAAACAATAGTGGTAATGGTCATGCTTATGTTATGGATAATTTCTTATATGGAGGTTATGGATTGAACAACAACCTTTCTCAAAGGAATAATCAAATGGAAATGATGGTTACAAACCAAAATTATTTTCCATTTAATATTTCTCAAGAAACCAAGCCTTTGAATAGTGTTGTACCAGATGAAGTCTCATGCATATCCTCAGTGAATTATTACAAAAGAGTTGGCATGAACAGAAATAATAAGGCATATCCTTATGCCTCTAGAAAGCCTGAGAAAGTTAAAAAGAAGATCAACTTTATAAAAGGGCAATGGACAGTAGAAGAAGATCGGTTGTTGGTTCAGCTGGTTGGAGAACATGGTTTGAGAAAATGGTCTCATATTGCTGAGAATTTGCCTGGTAGAATAGGAAAACAATGCAGAGAGAGATGGCATAATCATCTAAAGCCTGACATTAAGAAGGACATATGGAGTGAGGAAGAGGACAACATATTGATCAAAGCACATGAAGAGATAGGAAACAAATGGGCGGAGATAGCTAAAAGGTTACCAGGAAGAACTGAAAACTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGACAATACTCCAAAAGAAAGGGTAGATCAAAGTACCCTAAAGGAACTCTTCTACAAAAATATATCAAGAGCTTGAACCTCGACGAAAACCCTCCCAAAGATTATAGAAGAAAACCTTCAGCTAATGCTATAAAAAACAAAACCAACAGAAGCACAACAATATCCTCTCAGTCTCAACAAACTGAACAATTTTTTCCCAATGATCAGTGTTTGGTACCAACTTGTGATTTTGATGATGTCCCGGATTTTTCTTTCGATGAGAATTTGTTTCAAAATGGGTGTAGCATTGATTCTCTACTAGATGATATGCAATGTGCTGAAGCTGATCAAATTATGGAAGGAAAAAAACATTTTGATGTTGAGACAGAAATGCCACTAGATATTATGGAATCTATGCTTGGAGTTGAAGTTAAGAAGGAGATGGATTTGATGGAGATGGTTTTTTCAGGTCAACGAAAATTTTCAGGTGACTCATATCTTGGTAATGACATCAACATTGGTTTGTGA
Protein sequence

>Msa0422420

MDFQTNFLQENYHLKPNIKNYENPFGVVPSSHGFFQDFNHIDKFNVNSSTFFNPVSGVKNFDLSDNFTYDVHHNFKSFTENNSGNGHAYVMDNFLYGGYGLNNNLSQRNNQMEMMVTNQNYFPFNISQETKPLNSVVPDEVSCISSVNYYKRVGMNRNNKAYPYASRKPEKVKKKINFIKGQWTVEEDRLLVQLVGEHGLRKWSHIAENLPGRIGKQCRERWHNHLKPDIKKDIWSEEEDNILIKAHEEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKGRSKYPKGTLLQKYIKSLNLDENPPKDYRRKPSANAIKNKTNRSTTISSQSQQTEQFFPNDQCLVPTCDFDDVPDFSFDENLFQNGCSIDSLLDDMQCAEADQIMEGKKHFDVETEMPLDIMESMLGVEVKKEMDLMEMVFSGQRKFSGDSYLGNDINIGL*