Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427010 | GAU12310.1 | 69.795 | 682 | 188 | 4 | 31 | 694 | 78 | 759 | 0.0 | 961 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427010 | sp|Q9SZL8|FRS5_ARATH | 38.261 | 575 | 325 | 8 | 41 | 591 | 70 | 638 | 2.85e-141 | 435 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427010 | A0A2K3L9Y4 | 63.348 | 663 | 217 | 7 | 48 | 693 | 1 | 654 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0427010 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427010 | MtrunA17_Chr5g0448761 | 37.750 | 649 | 370 | 11 | 38 | 657 | 54 | 697 | 4.28e-150 | 455 |
| Msa0427010 | MtrunA17_Chr1g0202341 | 39.543 | 569 | 311 | 7 | 42 | 586 | 49 | 608 | 8.92e-143 | 433 |
| Msa0427010 | MtrunA17_Chr5g0440451 | 35.570 | 596 | 315 | 10 | 43 | 593 | 42 | 613 | 3.49e-119 | 379 |
| Msa0427010 | MtrunA17_Chr5g0448511 | 40.611 | 458 | 254 | 6 | 206 | 648 | 5 | 459 | 3.89e-119 | 367 |
| Msa0427010 | MtrunA17_Chr2g0296781 | 35.088 | 684 | 364 | 19 | 48 | 689 | 1 | 646 | 7.55e-110 | 348 |
| Msa0427010 | MtrunA17_Chr3g0118611 | 42.686 | 417 | 223 | 3 | 214 | 618 | 118 | 530 | 9.89e-109 | 347 |
| Msa0427010 | MtrunA17_Chr1g0207551 | 36.870 | 575 | 321 | 12 | 41 | 588 | 31 | 590 | 1.36e-108 | 347 |
| Msa0427010 | MtrunA17_Chr3g0080351 | 32.923 | 650 | 373 | 14 | 10 | 623 | 39 | 661 | 5.60e-108 | 347 |
| Msa0427010 | MtrunA17_Chr5g0441581 | 36.140 | 570 | 316 | 10 | 44 | 585 | 32 | 581 | 4.07e-103 | 330 |
| Msa0427010 | MtrunA17_Chr2g0329031 | 32.746 | 568 | 338 | 12 | 43 | 586 | 13 | 560 | 1.11e-97 | 317 |
| Msa0427010 | MtrunA17_Chr2g0287061 | 33.333 | 606 | 336 | 16 | 27 | 612 | 168 | 725 | 7.17e-96 | 313 |
| Msa0427010 | MtrunA17_Chr6g0477261 | 35.231 | 562 | 298 | 12 | 166 | 689 | 2 | 535 | 8.49e-96 | 310 |
| Msa0427010 | MtrunA17_Chr3g0082121 | 32.689 | 621 | 375 | 14 | 44 | 640 | 43 | 644 | 2.79e-91 | 299 |
| Msa0427010 | MtrunA17_Chr2g0291581 | 34.201 | 576 | 318 | 16 | 44 | 585 | 71 | 619 | 1.26e-89 | 294 |
| Msa0427010 | MtrunA17_Chr1g0196541 | 34.982 | 566 | 326 | 13 | 48 | 584 | 1 | 553 | 8.62e-89 | 293 |
| Msa0427010 | MtrunA17_Chr8g0363841 | 31.616 | 563 | 348 | 9 | 51 | 586 | 24 | 576 | 1.67e-88 | 291 |
| Msa0427010 | MtrunA17_Chr2g0324011 | 29.196 | 572 | 372 | 7 | 44 | 591 | 10 | 572 | 5.37e-84 | 276 |
| Msa0427010 | MtrunA17_Chr1g0203721 | 28.485 | 660 | 426 | 13 | 46 | 671 | 65 | 712 | 3.30e-81 | 276 |
| Msa0427010 | MtrunA17_Chr1g0198761 | 29.765 | 682 | 406 | 20 | 50 | 691 | 53 | 701 | 1.34e-78 | 266 |
| Msa0427010 | MtrunA17_Chr6g0458391 | 30.442 | 611 | 365 | 17 | 10 | 588 | 184 | 766 | 1.69e-78 | 266 |
| Msa0427010 | MtrunA17_Chr2g0276841 | 29.451 | 601 | 373 | 14 | 20 | 584 | 41 | 626 | 5.64e-78 | 263 |
| Msa0427010 | MtrunA17_Chr2g0291591 | 31.721 | 517 | 316 | 10 | 44 | 536 | 64 | 567 | 6.07e-77 | 257 |
| Msa0427010 | MtrunA17_Chr2g0287651 | 27.549 | 657 | 429 | 12 | 43 | 671 | 74 | 711 | 2.48e-75 | 259 |
| Msa0427010 | MtrunA17_Chr1g0203051 | 28.261 | 598 | 391 | 11 | 3 | 575 | 38 | 622 | 1.24e-73 | 250 |
| Msa0427010 | MtrunA17_Chr2g0294841 | 28.548 | 620 | 401 | 13 | 1 | 590 | 1 | 608 | 4.84e-71 | 246 |
| Msa0427010 | MtrunA17_Chr2g0290391 | 26.587 | 583 | 375 | 15 | 42 | 588 | 49 | 614 | 5.21e-55 | 200 |
| Msa0427010 | MtrunA17_Chr1g0164591 | 33.654 | 312 | 191 | 3 | 122 | 421 | 1 | 308 | 4.74e-52 | 183 |
| Msa0427010 | MtrunA17_Chr5g0431001 | 29.864 | 442 | 264 | 12 | 41 | 444 | 55 | 488 | 1.99e-48 | 178 |
| Msa0427010 | MtrunA17_Chr7g0258861 | 32.343 | 303 | 183 | 6 | 41 | 328 | 5 | 300 | 1.84e-44 | 161 |
| Msa0427010 | MtrunA17_Chr2g0308841 | 27.948 | 229 | 162 | 2 | 365 | 591 | 4 | 231 | 5.79e-24 | 102 |
| Msa0427010 | MtrunA17_Chr2g0289081 | 51.282 | 78 | 36 | 1 | 37 | 112 | 57 | 134 | 1.63e-19 | 85.5 |
| Msa0427010 | MtrunA17_Chr1g0149131 | 32.727 | 110 | 62 | 1 | 319 | 416 | 1 | 110 | 1.14e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0427010 | AT4G38180.1 | 38.261 | 575 | 325 | 8 | 41 | 591 | 70 | 638 | 2.89e-142 | 435 |
| Msa0427010 | AT2G27110.2 | 34.966 | 592 | 337 | 12 | 11 | 586 | 19 | 578 | 4.69e-117 | 371 |
| Msa0427010 | AT2G27110.1 | 34.966 | 592 | 337 | 12 | 11 | 586 | 19 | 578 | 4.69e-117 | 371 |
| Msa0427010 | AT4G15090.1 | 36.210 | 591 | 326 | 13 | 33 | 593 | 46 | 615 | 8.23e-112 | 357 |
| Msa0427010 | AT4G15090.5 | 36.210 | 591 | 326 | 13 | 33 | 593 | 46 | 615 | 8.23e-112 | 357 |
| Msa0427010 | AT4G15090.3 | 36.210 | 591 | 326 | 13 | 33 | 593 | 46 | 615 | 8.23e-112 | 357 |
| Msa0427010 | AT4G15090.2 | 36.210 | 591 | 326 | 13 | 33 | 593 | 46 | 615 | 8.23e-112 | 357 |
| Msa0427010 | AT4G15090.4 | 36.210 | 591 | 326 | 13 | 33 | 593 | 46 | 615 | 8.23e-112 | 357 |
| Msa0427010 | AT2G27110.3 | 43.117 | 385 | 205 | 4 | 214 | 586 | 51 | 433 | 3.03e-111 | 352 |
| Msa0427010 | AT4G38170.1 | 38.235 | 442 | 251 | 6 | 218 | 644 | 21 | 455 | 7.85e-108 | 338 |
| Msa0427010 | AT3G22170.2 | 32.292 | 576 | 341 | 10 | 38 | 586 | 64 | 617 | 2.76e-100 | 327 |
| Msa0427010 | AT3G22170.1 | 32.292 | 576 | 341 | 10 | 38 | 586 | 64 | 617 | 2.76e-100 | 327 |
| Msa0427010 | AT3G06250.2 | 32.155 | 594 | 328 | 12 | 43 | 616 | 189 | 727 | 1.83e-94 | 309 |
| Msa0427010 | AT3G06250.1 | 32.155 | 594 | 328 | 12 | 43 | 616 | 189 | 727 | 1.83e-94 | 309 |
| Msa0427010 | AT3G06250.3 | 32.155 | 594 | 328 | 12 | 43 | 616 | 189 | 727 | 1.83e-94 | 309 |
| Msa0427010 | AT5G18960.2 | 32.807 | 570 | 315 | 13 | 43 | 591 | 210 | 732 | 1.02e-91 | 302 |
| Msa0427010 | AT5G18960.1 | 32.807 | 570 | 315 | 13 | 43 | 591 | 210 | 732 | 1.02e-91 | 302 |
| Msa0427010 | AT1G76320.3 | 32.451 | 567 | 331 | 13 | 48 | 586 | 1 | 543 | 3.98e-89 | 293 |
| Msa0427010 | AT1G76320.1 | 32.628 | 567 | 330 | 14 | 48 | 586 | 1 | 543 | 5.81e-89 | 294 |
| Msa0427010 | AT1G76320.4 | 32.628 | 567 | 330 | 14 | 48 | 586 | 1 | 543 | 5.81e-89 | 294 |
| Msa0427010 | AT1G76320.2 | 32.628 | 567 | 330 | 14 | 48 | 586 | 1 | 543 | 6.92e-89 | 293 |
| Msa0427010 | AT4G19990.5 | 32.677 | 609 | 343 | 15 | 34 | 612 | 11 | 582 | 1.15e-87 | 291 |
| Msa0427010 | AT4G19990.3 | 32.677 | 609 | 343 | 15 | 34 | 612 | 11 | 582 | 1.61e-87 | 290 |
| Msa0427010 | AT4G19990.4 | 32.677 | 609 | 343 | 15 | 34 | 612 | 11 | 582 | 1.61e-87 | 290 |
| Msa0427010 | AT4G19990.6 | 32.677 | 609 | 343 | 15 | 34 | 612 | 11 | 582 | 1.88e-87 | 291 |
| Msa0427010 | AT4G19990.2 | 32.677 | 609 | 343 | 15 | 34 | 612 | 11 | 582 | 1.88e-87 | 291 |
| Msa0427010 | AT4G19990.7 | 32.677 | 609 | 343 | 15 | 34 | 612 | 25 | 596 | 2.40e-87 | 290 |
| Msa0427010 | AT2G32250.5 | 30.700 | 557 | 324 | 9 | 48 | 587 | 42 | 553 | 2.92e-85 | 285 |
| Msa0427010 | AT2G32250.7 | 30.700 | 557 | 324 | 9 | 48 | 587 | 1 | 512 | 3.84e-85 | 284 |
| Msa0427010 | AT2G32250.8 | 30.700 | 557 | 324 | 9 | 48 | 587 | 1 | 512 | 4.01e-85 | 284 |
| Msa0427010 | AT2G32250.6 | 30.700 | 557 | 324 | 9 | 48 | 587 | 42 | 553 | 5.44e-85 | 285 |
| Msa0427010 | AT2G32250.1 | 30.700 | 557 | 324 | 9 | 48 | 587 | 42 | 553 | 5.44e-85 | 285 |
| Msa0427010 | AT2G32250.3 | 30.700 | 557 | 324 | 9 | 48 | 587 | 42 | 553 | 5.44e-85 | 285 |
| Msa0427010 | AT2G32250.2 | 30.700 | 557 | 324 | 9 | 48 | 587 | 42 | 553 | 5.86e-85 | 285 |
| Msa0427010 | AT2G32250.4 | 30.700 | 557 | 324 | 9 | 48 | 587 | 42 | 553 | 5.86e-85 | 285 |
| Msa0427010 | AT4G19990.1 | 33.454 | 553 | 308 | 13 | 83 | 612 | 10 | 525 | 1.26e-84 | 281 |
| Msa0427010 | AT1G52520.1 | 29.851 | 603 | 370 | 15 | 34 | 601 | 74 | 658 | 1.85e-80 | 270 |
| Msa0427010 | AT1G80010.1 | 29.725 | 582 | 354 | 15 | 44 | 586 | 95 | 660 | 9.70e-77 | 261 |
| Msa0427010 | AT1G10240.2 | 27.667 | 600 | 378 | 15 | 21 | 584 | 25 | 604 | 6.90e-69 | 238 |
| Msa0427010 | AT1G10240.1 | 27.667 | 600 | 378 | 15 | 21 | 584 | 25 | 604 | 6.90e-69 | 238 |
| Msa0427010 | AT5G28530.3 | 25.039 | 639 | 420 | 18 | 44 | 646 | 55 | 670 | 5.41e-54 | 197 |
| Msa0427010 | AT5G28530.2 | 25.039 | 639 | 420 | 18 | 44 | 646 | 55 | 670 | 5.41e-54 | 197 |
| Msa0427010 | AT5G28530.1 | 25.039 | 639 | 424 | 18 | 44 | 646 | 55 | 674 | 9.42e-54 | 197 |
| Msa0427010 | AT5G28530.5 | 23.917 | 623 | 384 | 22 | 44 | 646 | 55 | 607 | 1.85e-35 | 142 |
| Msa0427010 | AT5G28530.4 | 23.917 | 623 | 388 | 22 | 44 | 646 | 55 | 611 | 3.21e-35 | 142 |
Find 77 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATTGCATAAAAGAAATT+TGG | 0.098305 | 3_2:-77702725 | None:intergenic |
| TTGTCAACTTTATGAATTTA+TGG | 0.151879 | 3_2:+77703714 | Msa0427010:CDS |
| AATCATATTTAACCATTATT+TGG | 0.161348 | 3_2:-77703222 | None:intergenic |
| AAACATCTTTAAGAAGTTTC+AGG | 0.189455 | 3_2:+77703546 | Msa0427010:CDS |
| TCTTCTTCGGCATTTGATTT+TGG | 0.192710 | 3_2:-77701921 | None:intergenic |
| CCTTTAGTTTGTGCCATTAT+CGG | 0.234963 | 3_2:-77704114 | None:intergenic |
| AGGTTGGCCTATAATTATTT+TGG | 0.238068 | 3_2:+77702800 | Msa0427010:CDS |
| TATTGATCCTTGTATTGATA+TGG | 0.239238 | 3_2:+77702160 | Msa0427010:CDS |
| ATGCCATTTGCGCCATTTAC+TGG | 0.253410 | 3_2:+77702869 | Msa0427010:CDS |
| TCTTTCGGAGTCCATCATTC+TGG | 0.292595 | 3_2:-77704007 | None:intergenic |
| AATAATGGTTAAATATGATT+TGG | 0.302795 | 3_2:+77703225 | Msa0427010:CDS |
| TGATGATTCAATCCAGTAAA+TGG | 0.305923 | 3_2:-77702881 | None:intergenic |
| CGCTTTAAAATATATTCATT+TGG | 0.310558 | 3_2:-77703793 | None:intergenic |
| GCAATACAATCACAGTAAAA+AGG | 0.311417 | 3_2:+77702336 | Msa0427010:CDS |
| AACTCAGCTTCTTCAGTTGT+TGG | 0.313522 | 3_2:-77704078 | None:intergenic |
| AAATGTAATGATAGTCCATT+TGG | 0.314496 | 3_2:-77702429 | None:intergenic |
| CTTAAGATAGTTTATACTCT+TGG | 0.319473 | 3_2:-77702483 | None:intergenic |
| CAAAGCACAACCGAATAAAA+TGG | 0.321919 | 3_2:-77702912 | None:intergenic |
| GATCAAGAGGGCTTGCTTAC+CGG | 0.322520 | 3_2:+77702554 | Msa0427010:CDS |
| AACATCTCCAAAATAATTAT+AGG | 0.322792 | 3_2:-77702807 | None:intergenic |
| TTAAGATAGTTTATACTCTT+GGG | 0.331752 | 3_2:-77702482 | None:intergenic |
| TGTCAACTTTATGAATTTAT+GGG | 0.343627 | 3_2:+77703715 | Msa0427010:CDS |
| GTATTGCATAAAAGAAATTT+GGG | 0.370134 | 3_2:-77702724 | None:intergenic |
| GCTTGAAAAGATCATCAAAA+AGG | 0.372423 | 3_2:+77703984 | Msa0427010:CDS |
| AAGGTCTTCATATTATAAAT+AGG | 0.380706 | 3_2:-77703298 | None:intergenic |
| TGAAACTCTAGTTTGTCTTT+CGG | 0.388167 | 3_2:-77704022 | None:intergenic |
| GGAAGATTGGCACCAAATAA+TGG | 0.388470 | 3_2:+77703210 | Msa0427010:CDS |
| TGATCTGTAATTATTGAAAC+AGG | 0.395118 | 3_2:-77703007 | None:intergenic |
| ATTATGCAGACATATCTTGA+TGG | 0.397243 | 3_2:+77703741 | Msa0427010:CDS |
| CATGTTATGACTATCTTCTT+CGG | 0.402279 | 3_2:-77701934 | None:intergenic |
| TGGACAAAGGATGCTAATAT+TGG | 0.412634 | 3_2:+77703817 | Msa0427010:CDS |
| ATAAAGTTGACAACCACATT+TGG | 0.431711 | 3_2:-77703704 | None:intergenic |
| AATGTTTAGCAATGAAGGTT+CGG | 0.437737 | 3_2:+77702589 | Msa0427010:CDS |
| TTACATGGTTGTTTGAAACT+TGG | 0.443448 | 3_2:+77702960 | Msa0427010:CDS |
| GCTACAATGTTTAGCAATGA+AGG | 0.444472 | 3_2:+77702584 | Msa0427010:CDS |
| AACATCAAGAACTGATTGTA+AGG | 0.444776 | 3_2:+77702373 | Msa0427010:CDS |
| CTCTAATTTCATACAAACCT+TGG | 0.445596 | 3_2:-77703264 | None:intergenic |
| CTTTCTCTGATAGAGATTGT+TGG | 0.446604 | 3_2:+77702612 | Msa0427010:CDS |
| ATATTTGTTTGCTCTAATGC+TGG | 0.447741 | 3_2:+77702281 | Msa0427010:CDS |
| CAATATTCGAGATCCGATAA+TGG | 0.452489 | 3_2:+77704101 | Msa0427010:CDS |
| AATCCAGTAAATGGCGCAAA+TGG | 0.467392 | 3_2:-77702872 | None:intergenic |
| ATTTGGCAGCCCTTGTATCA+AGG | 0.469613 | 3_2:-77703687 | None:intergenic |
| GTTGTTTGAAACTTGGCTAA+TGG | 0.473673 | 3_2:+77702967 | Msa0427010:CDS |
| TGAACATCTAAGTCATGCTC+AGG | 0.476339 | 3_2:-77702125 | None:intergenic |
| AATAATTACAGATCAAGATA+AGG | 0.482617 | 3_2:+77703015 | Msa0427010:CDS |
| CCGATAATGGCACAAACTAA+AGG | 0.499113 | 3_2:+77704114 | Msa0427010:CDS |
| AATGTAATGATAGTCCATTT+GGG | 0.500833 | 3_2:-77702428 | None:intergenic |
| GCTTGATGCAAGGTCGAGGT+TGG | 0.513779 | 3_2:+77702784 | Msa0427010:CDS |
| GGTCAGATAATAAACTTGCT+TGG | 0.514870 | 3_2:-77703921 | None:intergenic |
| ACAAACTAAAGGAAGACAAA+AGG | 0.527619 | 3_2:+77704125 | Msa0427010:CDS |
| TTTGGCTTGATGCAAGGTCG+AGG | 0.528670 | 3_2:+77702780 | Msa0427010:CDS |
| GCTAATATTGGCATTATATG+TGG | 0.529640 | 3_2:+77703829 | Msa0427010:CDS |
| TAAGATAGTTTATACTCTTG+GGG | 0.531783 | 3_2:-77702481 | None:intergenic |
| TGTCATTACTATCAACATGT+TGG | 0.533945 | 3_2:-77702304 | None:intergenic |
| TTTATGTGGACCTTGATACA+AGG | 0.535609 | 3_2:+77703677 | Msa0427010:CDS |
| TGAAACTTGGCTAATGGCAA+TGG | 0.547020 | 3_2:+77702973 | Msa0427010:CDS |
| GAAACTTGGCTAATGGCAAT+GGG | 0.548907 | 3_2:+77702974 | Msa0427010:CDS |
| AGAGTCATATACTGTTTATG+TGG | 0.549358 | 3_2:+77703663 | Msa0427010:CDS |
| TCATAACATGGAGGACATAG+AGG | 0.553789 | 3_2:+77701947 | Msa0427010:CDS |
| AGTTGAACAGTTTGATCAAG+AGG | 0.557965 | 3_2:+77702541 | Msa0427010:CDS |
| TATGTGCGGAGCAATATCTA+AGG | 0.563884 | 3_2:+77703039 | Msa0427010:CDS |
| TGTATGAAATTAGAGAGTCA+TGG | 0.568726 | 3_2:+77703272 | Msa0427010:CDS |
| GTTGAACAGTTTGATCAAGA+GGG | 0.578599 | 3_2:+77702542 | Msa0427010:CDS |
| GTTTCAGGACGAGCTTGCAA+AGG | 0.593760 | 3_2:+77703561 | Msa0427010:CDS |
| CGAAGAAGATAGTCATAACA+TGG | 0.604552 | 3_2:+77701935 | Msa0427010:CDS |
| CAATACTCATAATCATGCAA+TGG | 0.611156 | 3_2:+77702454 | Msa0427010:CDS |
| AAAGGTTAGCCACTACATCA+AGG | 0.613995 | 3_2:+77703579 | Msa0427010:CDS |
| TCAAATTCCATATCAATACA+AGG | 0.614636 | 3_2:-77702167 | None:intergenic |
| AGTAAAGTTTGACAAAGCAG+TGG | 0.629642 | 3_2:+77703414 | Msa0427010:CDS |
| GATACAAGGGCTGCCAAATG+TGG | 0.650490 | 3_2:+77703691 | Msa0427010:CDS |
| TTATGTGGACCTTGATACAA+GGG | 0.662546 | 3_2:+77703678 | Msa0427010:CDS |
| GAACATCTAAGTCATGCTCA+GGG | 0.664893 | 3_2:-77702124 | None:intergenic |
| GATCAAGATAAGGCTATGTG+CGG | 0.685544 | 3_2:+77703025 | Msa0427010:CDS |
| ACTTGGCTAATGGCAATGGG+TGG | 0.693217 | 3_2:+77702977 | Msa0427010:CDS |
| TACTACGAAATCTCGCAGTG+TGG | 0.701060 | 3_2:-77703395 | None:intergenic |
| AGAAGATAGTCATAACATGG+AGG | 0.736903 | 3_2:+77701938 | Msa0427010:CDS |
| CTGGGATGAATACAACACAG+AGG | 0.795926 | 3_2:+77703326 | Msa0427010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGAATGATTAATTTTTTT+TGG | + | chr3_2:77702762-77702781 | Msa0427010:CDS | 10.0% |
| !!! | ATAGAATGATTAATTTTTTT+TGG | + | chr3_2:77702762-77702781 | Msa0427010:CDS | 10.0% |
| !! | AATCATATTTAACCATTATT+TGG | - | chr3_2:77703225-77703244 | None:intergenic | 15.0% |
| !! | AATAATGGTTAAATATGATT+TGG | + | chr3_2:77703225-77703244 | Msa0427010:CDS | 15.0% |
| !! | AATCATATTTAACCATTATT+TGG | - | chr3_2:77703225-77703244 | None:intergenic | 15.0% |
| !! | AATAATGGTTAAATATGATT+TGG | + | chr3_2:77703225-77703244 | Msa0427010:CDS | 15.0% |
| !! | TTAAGATAGTTTATACTCTT+GGG | - | chr3_2:77702485-77702504 | None:intergenic | 20.0% |
| !! | GTATTGCATAAAAGAAATTT+GGG | - | chr3_2:77702727-77702746 | None:intergenic | 20.0% |
| !! | TGTATTGCATAAAAGAAATT+TGG | - | chr3_2:77702728-77702747 | None:intergenic | 20.0% |
| !! | AACATCTCCAAAATAATTAT+AGG | - | chr3_2:77702810-77702829 | None:intergenic | 20.0% |
| !! | AATAATTACAGATCAAGATA+AGG | + | chr3_2:77703015-77703034 | Msa0427010:CDS | 20.0% |
| !!! | ATGATTTGGAAAAAAATGAA+TGG | + | chr3_2:77703239-77703258 | Msa0427010:CDS | 20.0% |
| !! | AAGGTCTTCATATTATAAAT+AGG | - | chr3_2:77703301-77703320 | None:intergenic | 20.0% |
| !! | TTGTCAACTTTATGAATTTA+TGG | + | chr3_2:77703714-77703733 | Msa0427010:CDS | 20.0% |
| !! | TGTCAACTTTATGAATTTAT+GGG | + | chr3_2:77703715-77703734 | Msa0427010:CDS | 20.0% |
| !!! | CGCTTTAAAATATATTCATT+TGG | - | chr3_2:77703796-77703815 | None:intergenic | 20.0% |
| !!! | ATGAATATATTTTAAAGCGT+TGG | + | chr3_2:77703797-77703816 | Msa0427010:CDS | 20.0% |
| !! | TTAAGATAGTTTATACTCTT+GGG | - | chr3_2:77702485-77702504 | None:intergenic | 20.0% |
| !! | GTATTGCATAAAAGAAATTT+GGG | - | chr3_2:77702727-77702746 | None:intergenic | 20.0% |
| !! | TGTATTGCATAAAAGAAATT+TGG | - | chr3_2:77702728-77702747 | None:intergenic | 20.0% |
| !! | AACATCTCCAAAATAATTAT+AGG | - | chr3_2:77702810-77702829 | None:intergenic | 20.0% |
| !! | AATAATTACAGATCAAGATA+AGG | + | chr3_2:77703015-77703034 | Msa0427010:CDS | 20.0% |
| !!! | ATGATTTGGAAAAAAATGAA+TGG | + | chr3_2:77703239-77703258 | Msa0427010:CDS | 20.0% |
| !! | AAGGTCTTCATATTATAAAT+AGG | - | chr3_2:77703301-77703320 | None:intergenic | 20.0% |
| !! | TTGTCAACTTTATGAATTTA+TGG | + | chr3_2:77703714-77703733 | Msa0427010:CDS | 20.0% |
| !! | TGTCAACTTTATGAATTTAT+GGG | + | chr3_2:77703715-77703734 | Msa0427010:CDS | 20.0% |
| !!! | CGCTTTAAAATATATTCATT+TGG | - | chr3_2:77703796-77703815 | None:intergenic | 20.0% |
| !!! | ATGAATATATTTTAAAGCGT+TGG | + | chr3_2:77703797-77703816 | Msa0427010:CDS | 20.0% |
| !! | TATTGATCCTTGTATTGATA+TGG | + | chr3_2:77702160-77702179 | Msa0427010:CDS | 25.0% |
| ! | TCAAATTCCATATCAATACA+AGG | - | chr3_2:77702170-77702189 | None:intergenic | 25.0% |
| !! | ACATCATTTGCTAAAAAAGA+AGG | + | chr3_2:77702218-77702237 | Msa0427010:CDS | 25.0% |
| !! | TTTGCTAAAAAAGAAGGTTT+TGG | + | chr3_2:77702224-77702243 | Msa0427010:CDS | 25.0% |
| ! | TAGTTTCAAAAGCAAAAATG+AGG | + | chr3_2:77702405-77702424 | Msa0427010:CDS | 25.0% |
| ! | AATGTAATGATAGTCCATTT+GGG | - | chr3_2:77702431-77702450 | None:intergenic | 25.0% |
| ! | AAATGTAATGATAGTCCATT+TGG | - | chr3_2:77702432-77702451 | None:intergenic | 25.0% |
| ! | TAAGATAGTTTATACTCTTG+GGG | - | chr3_2:77702484-77702503 | None:intergenic | 25.0% |
| ! | CTTAAGATAGTTTATACTCT+TGG | - | chr3_2:77702486-77702505 | None:intergenic | 25.0% |
| ! | TCTTAAGTGCCATAAAAAAA+TGG | + | chr3_2:77702499-77702518 | Msa0427010:CDS | 25.0% |
| ! | CTTAAGTGCCATAAAAAAAT+GGG | + | chr3_2:77702500-77702519 | Msa0427010:CDS | 25.0% |
| ! | TGATCTGTAATTATTGAAAC+AGG | - | chr3_2:77703010-77703029 | None:intergenic | 25.0% |
| !! | GCTTGAAATTTGAACTTTTA+TGG | - | chr3_2:77703141-77703160 | None:intergenic | 25.0% |
| !! | ATTATGCATTGAAGATTTTG+AGG | + | chr3_2:77703189-77703208 | Msa0427010:CDS | 25.0% |
| ! | ATCAAAAATTGAAAAGCAAG+CGG | + | chr3_2:77703507-77703526 | Msa0427010:CDS | 25.0% |
| !! | AAACATCTTTAAGAAGTTTC+AGG | + | chr3_2:77703546-77703565 | Msa0427010:CDS | 25.0% |
| !! | TATTGATCCTTGTATTGATA+TGG | + | chr3_2:77702160-77702179 | Msa0427010:CDS | 25.0% |
| ! | TCAAATTCCATATCAATACA+AGG | - | chr3_2:77702170-77702189 | None:intergenic | 25.0% |
| !! | ACATCATTTGCTAAAAAAGA+AGG | + | chr3_2:77702218-77702237 | Msa0427010:CDS | 25.0% |
| !! | TTTGCTAAAAAAGAAGGTTT+TGG | + | chr3_2:77702224-77702243 | Msa0427010:CDS | 25.0% |
| ! | TAGTTTCAAAAGCAAAAATG+AGG | + | chr3_2:77702405-77702424 | Msa0427010:CDS | 25.0% |
| ! | AATGTAATGATAGTCCATTT+GGG | - | chr3_2:77702431-77702450 | None:intergenic | 25.0% |
| ! | AAATGTAATGATAGTCCATT+TGG | - | chr3_2:77702432-77702451 | None:intergenic | 25.0% |
| ! | TAAGATAGTTTATACTCTTG+GGG | - | chr3_2:77702484-77702503 | None:intergenic | 25.0% |
| ! | CTTAAGATAGTTTATACTCT+TGG | - | chr3_2:77702486-77702505 | None:intergenic | 25.0% |
| ! | TCTTAAGTGCCATAAAAAAA+TGG | + | chr3_2:77702499-77702518 | Msa0427010:CDS | 25.0% |
| ! | CTTAAGTGCCATAAAAAAAT+GGG | + | chr3_2:77702500-77702519 | Msa0427010:CDS | 25.0% |
| ! | TGATCTGTAATTATTGAAAC+AGG | - | chr3_2:77703010-77703029 | None:intergenic | 25.0% |
| !! | GCTTGAAATTTGAACTTTTA+TGG | - | chr3_2:77703141-77703160 | None:intergenic | 25.0% |
| !! | ATTATGCATTGAAGATTTTG+AGG | + | chr3_2:77703189-77703208 | Msa0427010:CDS | 25.0% |
| ! | ATCAAAAATTGAAAAGCAAG+CGG | + | chr3_2:77703507-77703526 | Msa0427010:CDS | 25.0% |
| !! | AAACATCTTTAAGAAGTTTC+AGG | + | chr3_2:77703546-77703565 | Msa0427010:CDS | 25.0% |
| CATGTTATGACTATCTTCTT+CGG | - | chr3_2:77701937-77701956 | None:intergenic | 30.0% | |
| ATATTTGTTTGCTCTAATGC+TGG | + | chr3_2:77702281-77702300 | Msa0427010:CDS | 30.0% | |
| TGTCATTACTATCAACATGT+TGG | - | chr3_2:77702307-77702326 | None:intergenic | 30.0% | |
| GCAATACAATCACAGTAAAA+AGG | + | chr3_2:77702336-77702355 | Msa0427010:CDS | 30.0% | |
| AACATCAAGAACTGATTGTA+AGG | + | chr3_2:77702373-77702392 | Msa0427010:CDS | 30.0% | |
| CAATACTCATAATCATGCAA+TGG | + | chr3_2:77702454-77702473 | Msa0427010:CDS | 30.0% | |
| AATGTTTAGCAATGAAGGTT+CGG | + | chr3_2:77702589-77702608 | Msa0427010:CDS | 30.0% | |
| !! | CAACATCCAGATTTTTAGAT+CGG | - | chr3_2:77702655-77702674 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTGGCTTGATGCA+AGG | + | chr3_2:77702774-77702793 | Msa0427010:CDS | 30.0% |
| !!! | AGGTTGGCCTATAATTATTT+TGG | + | chr3_2:77702800-77702819 | Msa0427010:CDS | 30.0% |
| TGATGATTCAATCCAGTAAA+TGG | - | chr3_2:77702884-77702903 | None:intergenic | 30.0% | |
| ! | CATCATCAGTCCATTTTATT+CGG | + | chr3_2:77702902-77702921 | Msa0427010:CDS | 30.0% |
| ! | AAACAGAGAAGTCTTTTACA+TGG | + | chr3_2:77702945-77702964 | Msa0427010:CDS | 30.0% |
| ! | TTACATGGTTGTTTGAAACT+TGG | + | chr3_2:77702960-77702979 | Msa0427010:CDS | 30.0% |
| !! | TTGAAGATTTTGAGGAAGAT+TGG | + | chr3_2:77703197-77703216 | Msa0427010:CDS | 30.0% |
| CTCTAATTTCATACAAACCT+TGG | - | chr3_2:77703267-77703286 | None:intergenic | 30.0% | |
| TGTATGAAATTAGAGAGTCA+TGG | + | chr3_2:77703272-77703291 | Msa0427010:CDS | 30.0% | |
| !!! | AATATGAAGACCTTTTTTGC+TGG | + | chr3_2:77703307-77703326 | Msa0427010:CDS | 30.0% |
| !!! | ATATGAAGACCTTTTTTGCT+GGG | + | chr3_2:77703308-77703327 | Msa0427010:CDS | 30.0% |
| AAGGACAAAATCGAGAAAAA+TGG | + | chr3_2:77703598-77703617 | Msa0427010:CDS | 30.0% | |
| AGGACAAAATCGAGAAAAAT+GGG | + | chr3_2:77703599-77703618 | Msa0427010:CDS | 30.0% | |
| AGAGTCATATACTGTTTATG+TGG | + | chr3_2:77703663-77703682 | Msa0427010:CDS | 30.0% | |
| ATAAAGTTGACAACCACATT+TGG | - | chr3_2:77703707-77703726 | None:intergenic | 30.0% | |
| ATTATGCAGACATATCTTGA+TGG | + | chr3_2:77703741-77703760 | Msa0427010:CDS | 30.0% | |
| !!! | TATTTTAAAGCGTTGGACAA+AGG | + | chr3_2:77703804-77703823 | Msa0427010:CDS | 30.0% |
| GCTAATATTGGCATTATATG+TGG | + | chr3_2:77703829-77703848 | Msa0427010:CDS | 30.0% | |
| ! | ATATGTTCTCAGATTTTGCA+AGG | - | chr3_2:77703945-77703964 | None:intergenic | 30.0% |
| GCTTGAAAAGATCATCAAAA+AGG | + | chr3_2:77703984-77704003 | Msa0427010:CDS | 30.0% | |
| ! | TGAAACTCTAGTTTGTCTTT+CGG | - | chr3_2:77704025-77704044 | None:intergenic | 30.0% |
| ACAAACTAAAGGAAGACAAA+AGG | + | chr3_2:77704125-77704144 | Msa0427010:CDS | 30.0% | |
| CATGTTATGACTATCTTCTT+CGG | - | chr3_2:77701937-77701956 | None:intergenic | 30.0% | |
| ATATTTGTTTGCTCTAATGC+TGG | + | chr3_2:77702281-77702300 | Msa0427010:CDS | 30.0% | |
| TGTCATTACTATCAACATGT+TGG | - | chr3_2:77702307-77702326 | None:intergenic | 30.0% | |
| GCAATACAATCACAGTAAAA+AGG | + | chr3_2:77702336-77702355 | Msa0427010:CDS | 30.0% | |
| AACATCAAGAACTGATTGTA+AGG | + | chr3_2:77702373-77702392 | Msa0427010:CDS | 30.0% | |
| CAATACTCATAATCATGCAA+TGG | + | chr3_2:77702454-77702473 | Msa0427010:CDS | 30.0% | |
| AATGTTTAGCAATGAAGGTT+CGG | + | chr3_2:77702589-77702608 | Msa0427010:CDS | 30.0% | |
| !! | CAACATCCAGATTTTTAGAT+CGG | - | chr3_2:77702655-77702674 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTGGCTTGATGCA+AGG | + | chr3_2:77702774-77702793 | Msa0427010:CDS | 30.0% |
| !!! | AGGTTGGCCTATAATTATTT+TGG | + | chr3_2:77702800-77702819 | Msa0427010:CDS | 30.0% |
| TGATGATTCAATCCAGTAAA+TGG | - | chr3_2:77702884-77702903 | None:intergenic | 30.0% | |
| ! | CATCATCAGTCCATTTTATT+CGG | + | chr3_2:77702902-77702921 | Msa0427010:CDS | 30.0% |
| ! | AAACAGAGAAGTCTTTTACA+TGG | + | chr3_2:77702945-77702964 | Msa0427010:CDS | 30.0% |
| ! | TTACATGGTTGTTTGAAACT+TGG | + | chr3_2:77702960-77702979 | Msa0427010:CDS | 30.0% |
| !! | TTGAAGATTTTGAGGAAGAT+TGG | + | chr3_2:77703197-77703216 | Msa0427010:CDS | 30.0% |
| CTCTAATTTCATACAAACCT+TGG | - | chr3_2:77703267-77703286 | None:intergenic | 30.0% | |
| TGTATGAAATTAGAGAGTCA+TGG | + | chr3_2:77703272-77703291 | Msa0427010:CDS | 30.0% | |
| !!! | AATATGAAGACCTTTTTTGC+TGG | + | chr3_2:77703307-77703326 | Msa0427010:CDS | 30.0% |
| !!! | ATATGAAGACCTTTTTTGCT+GGG | + | chr3_2:77703308-77703327 | Msa0427010:CDS | 30.0% |
| AAGGACAAAATCGAGAAAAA+TGG | + | chr3_2:77703598-77703617 | Msa0427010:CDS | 30.0% | |
| AGGACAAAATCGAGAAAAAT+GGG | + | chr3_2:77703599-77703618 | Msa0427010:CDS | 30.0% | |
| AGAGTCATATACTGTTTATG+TGG | + | chr3_2:77703663-77703682 | Msa0427010:CDS | 30.0% | |
| ATAAAGTTGACAACCACATT+TGG | - | chr3_2:77703707-77703726 | None:intergenic | 30.0% | |
| ATTATGCAGACATATCTTGA+TGG | + | chr3_2:77703741-77703760 | Msa0427010:CDS | 30.0% | |
| !!! | TATTTTAAAGCGTTGGACAA+AGG | + | chr3_2:77703804-77703823 | Msa0427010:CDS | 30.0% |
| GCTAATATTGGCATTATATG+TGG | + | chr3_2:77703829-77703848 | Msa0427010:CDS | 30.0% | |
| ! | ATATGTTCTCAGATTTTGCA+AGG | - | chr3_2:77703945-77703964 | None:intergenic | 30.0% |
| GCTTGAAAAGATCATCAAAA+AGG | + | chr3_2:77703984-77704003 | Msa0427010:CDS | 30.0% | |
| ! | TGAAACTCTAGTTTGTCTTT+CGG | - | chr3_2:77704025-77704044 | None:intergenic | 30.0% |
| ACAAACTAAAGGAAGACAAA+AGG | + | chr3_2:77704125-77704144 | Msa0427010:CDS | 30.0% | |
| !! | TCTTCTTCGGCATTTGATTT+TGG | - | chr3_2:77701924-77701943 | None:intergenic | 35.0% |
| CGAAGAAGATAGTCATAACA+TGG | + | chr3_2:77701935-77701954 | Msa0427010:CDS | 35.0% | |
| AGAAGATAGTCATAACATGG+AGG | + | chr3_2:77701938-77701957 | Msa0427010:CDS | 35.0% | |
| AAGTGCCATAAAAAAATGGG+TGG | + | chr3_2:77702503-77702522 | Msa0427010:CDS | 35.0% | |
| AGTGCCATAAAAAAATGGGT+GGG | + | chr3_2:77702504-77702523 | Msa0427010:CDS | 35.0% | |
| AGTTGAACAGTTTGATCAAG+AGG | + | chr3_2:77702541-77702560 | Msa0427010:CDS | 35.0% | |
| GTTGAACAGTTTGATCAAGA+GGG | + | chr3_2:77702542-77702561 | Msa0427010:CDS | 35.0% | |
| ! | AAACATTGTAGCGACTTTTC+CGG | - | chr3_2:77702576-77702595 | None:intergenic | 35.0% |
| GCTACAATGTTTAGCAATGA+AGG | + | chr3_2:77702584-77702603 | Msa0427010:CDS | 35.0% | |
| CTTTCTCTGATAGAGATTGT+TGG | + | chr3_2:77702612-77702631 | Msa0427010:CDS | 35.0% | |
| AGATCTCCGATCTAAAAATC+TGG | + | chr3_2:77702646-77702665 | Msa0427010:CDS | 35.0% | |
| CGATCTAAAAATCTGGATGT+TGG | + | chr3_2:77702653-77702672 | Msa0427010:CDS | 35.0% | |
| CAAAGCACAACCGAATAAAA+TGG | - | chr3_2:77702915-77702934 | None:intergenic | 35.0% | |
| ! | GTTGTTTGAAACTTGGCTAA+TGG | + | chr3_2:77702967-77702986 | Msa0427010:CDS | 35.0% |
| CATAAACGATGTCGAGTATT+AGG | - | chr3_2:77703070-77703089 | None:intergenic | 35.0% | |
| GAAAAAAATGAATGGCTCCA+AGG | + | chr3_2:77703247-77703266 | Msa0427010:CDS | 35.0% | |
| TGTATTCATCCCAGCAAAAA+AGG | - | chr3_2:77703320-77703339 | None:intergenic | 35.0% | |
| AGTAAAGTTTGACAAAGCAG+TGG | + | chr3_2:77703414-77703433 | Msa0427010:CDS | 35.0% | |
| TTTATGTGGACCTTGATACA+AGG | + | chr3_2:77703677-77703696 | Msa0427010:CDS | 35.0% | |
| TTATGTGGACCTTGATACAA+GGG | + | chr3_2:77703678-77703697 | Msa0427010:CDS | 35.0% | |
| TGGACAAAGGATGCTAATAT+TGG | + | chr3_2:77703817-77703836 | Msa0427010:CDS | 35.0% | |
| ! | GGTCAGATAATAAACTTGCT+TGG | - | chr3_2:77703924-77703943 | None:intergenic | 35.0% |
| !! | TTGATGATCTTTTCAAGCTC+TGG | - | chr3_2:77703982-77704001 | None:intergenic | 35.0% |
| CAATATTCGAGATCCGATAA+TGG | + | chr3_2:77704101-77704120 | Msa0427010:CDS | 35.0% | |
| !! | CCTTTAGTTTGTGCCATTAT+CGG | - | chr3_2:77704117-77704136 | None:intergenic | 35.0% |
| !! | TCTTCTTCGGCATTTGATTT+TGG | - | chr3_2:77701924-77701943 | None:intergenic | 35.0% |
| CGAAGAAGATAGTCATAACA+TGG | + | chr3_2:77701935-77701954 | Msa0427010:CDS | 35.0% | |
| AGAAGATAGTCATAACATGG+AGG | + | chr3_2:77701938-77701957 | Msa0427010:CDS | 35.0% | |
| AAGTGCCATAAAAAAATGGG+TGG | + | chr3_2:77702503-77702522 | Msa0427010:CDS | 35.0% | |
| AGTGCCATAAAAAAATGGGT+GGG | + | chr3_2:77702504-77702523 | Msa0427010:CDS | 35.0% | |
| AGTTGAACAGTTTGATCAAG+AGG | + | chr3_2:77702541-77702560 | Msa0427010:CDS | 35.0% | |
| GTTGAACAGTTTGATCAAGA+GGG | + | chr3_2:77702542-77702561 | Msa0427010:CDS | 35.0% | |
| ! | AAACATTGTAGCGACTTTTC+CGG | - | chr3_2:77702576-77702595 | None:intergenic | 35.0% |
| GCTACAATGTTTAGCAATGA+AGG | + | chr3_2:77702584-77702603 | Msa0427010:CDS | 35.0% | |
| CTTTCTCTGATAGAGATTGT+TGG | + | chr3_2:77702612-77702631 | Msa0427010:CDS | 35.0% | |
| AGATCTCCGATCTAAAAATC+TGG | + | chr3_2:77702646-77702665 | Msa0427010:CDS | 35.0% | |
| CGATCTAAAAATCTGGATGT+TGG | + | chr3_2:77702653-77702672 | Msa0427010:CDS | 35.0% | |
| CAAAGCACAACCGAATAAAA+TGG | - | chr3_2:77702915-77702934 | None:intergenic | 35.0% | |
| ! | GTTGTTTGAAACTTGGCTAA+TGG | + | chr3_2:77702967-77702986 | Msa0427010:CDS | 35.0% |
| CATAAACGATGTCGAGTATT+AGG | - | chr3_2:77703070-77703089 | None:intergenic | 35.0% | |
| GAAAAAAATGAATGGCTCCA+AGG | + | chr3_2:77703247-77703266 | Msa0427010:CDS | 35.0% | |
| TGTATTCATCCCAGCAAAAA+AGG | - | chr3_2:77703320-77703339 | None:intergenic | 35.0% | |
| AGTAAAGTTTGACAAAGCAG+TGG | + | chr3_2:77703414-77703433 | Msa0427010:CDS | 35.0% | |
| TTTATGTGGACCTTGATACA+AGG | + | chr3_2:77703677-77703696 | Msa0427010:CDS | 35.0% | |
| TTATGTGGACCTTGATACAA+GGG | + | chr3_2:77703678-77703697 | Msa0427010:CDS | 35.0% | |
| TGGACAAAGGATGCTAATAT+TGG | + | chr3_2:77703817-77703836 | Msa0427010:CDS | 35.0% | |
| ! | GGTCAGATAATAAACTTGCT+TGG | - | chr3_2:77703924-77703943 | None:intergenic | 35.0% |
| !! | TTGATGATCTTTTCAAGCTC+TGG | - | chr3_2:77703982-77704001 | None:intergenic | 35.0% |
| CAATATTCGAGATCCGATAA+TGG | + | chr3_2:77704101-77704120 | Msa0427010:CDS | 35.0% | |
| !! | CCTTTAGTTTGTGCCATTAT+CGG | - | chr3_2:77704117-77704136 | None:intergenic | 35.0% |
| TCATAACATGGAGGACATAG+AGG | + | chr3_2:77701947-77701966 | Msa0427010:CDS | 40.0% | |
| GAACATCTAAGTCATGCTCA+GGG | - | chr3_2:77702127-77702146 | None:intergenic | 40.0% | |
| TGAACATCTAAGTCATGCTC+AGG | - | chr3_2:77702128-77702147 | None:intergenic | 40.0% | |
| AAGCAAAAATGAGGCCCAAA+TGG | + | chr3_2:77702414-77702433 | Msa0427010:CDS | 40.0% | |
| GTGCCATAAAAAAATGGGTG+GGG | + | chr3_2:77702505-77702524 | Msa0427010:CDS | 40.0% | |
| AATCCAGTAAATGGCGCAAA+TGG | - | chr3_2:77702875-77702894 | None:intergenic | 40.0% | |
| TGAAACTTGGCTAATGGCAA+TGG | + | chr3_2:77702973-77702992 | Msa0427010:CDS | 40.0% | |
| GAAACTTGGCTAATGGCAAT+GGG | + | chr3_2:77702974-77702993 | Msa0427010:CDS | 40.0% | |
| GATCAAGATAAGGCTATGTG+CGG | + | chr3_2:77703025-77703044 | Msa0427010:CDS | 40.0% | |
| TATGTGCGGAGCAATATCTA+AGG | + | chr3_2:77703039-77703058 | Msa0427010:CDS | 40.0% | |
| GGAAGATTGGCACCAAATAA+TGG | + | chr3_2:77703210-77703229 | Msa0427010:CDS | 40.0% | |
| ! | AAAGGTTAGCCACTACATCA+AGG | + | chr3_2:77703579-77703598 | Msa0427010:CDS | 40.0% |
| ! | CGATTTTGTCCTTGATGTAG+TGG | - | chr3_2:77703591-77703610 | None:intergenic | 40.0% |
| CATCAAAAAGGCCAGAATGA+TGG | + | chr3_2:77703996-77704015 | Msa0427010:CDS | 40.0% | |
| AACTCAGCTTCTTCAGTTGT+TGG | - | chr3_2:77704081-77704100 | None:intergenic | 40.0% | |
| ! | CCGATAATGGCACAAACTAA+AGG | + | chr3_2:77704114-77704133 | Msa0427010:CDS | 40.0% |
| TCATAACATGGAGGACATAG+AGG | + | chr3_2:77701947-77701966 | Msa0427010:CDS | 40.0% | |
| GAACATCTAAGTCATGCTCA+GGG | - | chr3_2:77702127-77702146 | None:intergenic | 40.0% | |
| TGAACATCTAAGTCATGCTC+AGG | - | chr3_2:77702128-77702147 | None:intergenic | 40.0% | |
| AAGCAAAAATGAGGCCCAAA+TGG | + | chr3_2:77702414-77702433 | Msa0427010:CDS | 40.0% | |
| GTGCCATAAAAAAATGGGTG+GGG | + | chr3_2:77702505-77702524 | Msa0427010:CDS | 40.0% | |
| AATCCAGTAAATGGCGCAAA+TGG | - | chr3_2:77702875-77702894 | None:intergenic | 40.0% | |
| TGAAACTTGGCTAATGGCAA+TGG | + | chr3_2:77702973-77702992 | Msa0427010:CDS | 40.0% | |
| GAAACTTGGCTAATGGCAAT+GGG | + | chr3_2:77702974-77702993 | Msa0427010:CDS | 40.0% | |
| GATCAAGATAAGGCTATGTG+CGG | + | chr3_2:77703025-77703044 | Msa0427010:CDS | 40.0% | |
| TATGTGCGGAGCAATATCTA+AGG | + | chr3_2:77703039-77703058 | Msa0427010:CDS | 40.0% | |
| GGAAGATTGGCACCAAATAA+TGG | + | chr3_2:77703210-77703229 | Msa0427010:CDS | 40.0% | |
| ! | AAAGGTTAGCCACTACATCA+AGG | + | chr3_2:77703579-77703598 | Msa0427010:CDS | 40.0% |
| ! | CGATTTTGTCCTTGATGTAG+TGG | - | chr3_2:77703591-77703610 | None:intergenic | 40.0% |
| CATCAAAAAGGCCAGAATGA+TGG | + | chr3_2:77703996-77704015 | Msa0427010:CDS | 40.0% | |
| AACTCAGCTTCTTCAGTTGT+TGG | - | chr3_2:77704081-77704100 | None:intergenic | 40.0% | |
| ! | CCGATAATGGCACAAACTAA+AGG | + | chr3_2:77704114-77704133 | Msa0427010:CDS | 40.0% |
| !!! | CTGCCCCACCCATTTTTTTA+TGG | - | chr3_2:77702511-77702530 | None:intergenic | 45.0% |
| ! | ATGCCATTTGCGCCATTTAC+TGG | + | chr3_2:77702869-77702888 | Msa0427010:CDS | 45.0% |
| CTGGGATGAATACAACACAG+AGG | + | chr3_2:77703326-77703345 | Msa0427010:CDS | 45.0% | |
| TACTACGAAATCTCGCAGTG+TGG | - | chr3_2:77703398-77703417 | None:intergenic | 45.0% | |
| ATTTGGCAGCCCTTGTATCA+AGG | - | chr3_2:77703690-77703709 | None:intergenic | 45.0% | |
| TCTTTCGGAGTCCATCATTC+TGG | - | chr3_2:77704010-77704029 | None:intergenic | 45.0% | |
| !!! | CTGCCCCACCCATTTTTTTA+TGG | - | chr3_2:77702511-77702530 | None:intergenic | 45.0% |
| ! | ATGCCATTTGCGCCATTTAC+TGG | + | chr3_2:77702869-77702888 | Msa0427010:CDS | 45.0% |
| CTGGGATGAATACAACACAG+AGG | + | chr3_2:77703326-77703345 | Msa0427010:CDS | 45.0% | |
| TACTACGAAATCTCGCAGTG+TGG | - | chr3_2:77703398-77703417 | None:intergenic | 45.0% | |
| ATTTGGCAGCCCTTGTATCA+AGG | - | chr3_2:77703690-77703709 | None:intergenic | 45.0% | |
| TCTTTCGGAGTCCATCATTC+TGG | - | chr3_2:77704010-77704029 | None:intergenic | 45.0% | |
| ! | GATCAAGAGGGCTTGCTTAC+CGG | + | chr3_2:77702554-77702573 | Msa0427010:CDS | 50.0% |
| !! | TTTGGCTTGATGCAAGGTCG+AGG | + | chr3_2:77702780-77702799 | Msa0427010:CDS | 50.0% |
| ACTTGGCTAATGGCAATGGG+TGG | + | chr3_2:77702977-77702996 | Msa0427010:CDS | 50.0% | |
| GTTTCAGGACGAGCTTGCAA+AGG | + | chr3_2:77703561-77703580 | Msa0427010:CDS | 50.0% | |
| GATACAAGGGCTGCCAAATG+TGG | + | chr3_2:77703691-77703710 | Msa0427010:CDS | 50.0% | |
| ! | GATCAAGAGGGCTTGCTTAC+CGG | + | chr3_2:77702554-77702573 | Msa0427010:CDS | 50.0% |
| !! | TTTGGCTTGATGCAAGGTCG+AGG | + | chr3_2:77702780-77702799 | Msa0427010:CDS | 50.0% |
| ACTTGGCTAATGGCAATGGG+TGG | + | chr3_2:77702977-77702996 | Msa0427010:CDS | 50.0% | |
| GTTTCAGGACGAGCTTGCAA+AGG | + | chr3_2:77703561-77703580 | Msa0427010:CDS | 50.0% | |
| GATACAAGGGCTGCCAAATG+TGG | + | chr3_2:77703691-77703710 | Msa0427010:CDS | 50.0% | |
| GCTTGATGCAAGGTCGAGGT+TGG | + | chr3_2:77702784-77702803 | Msa0427010:CDS | 55.0% | |
| GCTTGATGCAAGGTCGAGGT+TGG | + | chr3_2:77702784-77702803 | Msa0427010:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 77701912 | 77704158 | 77701912 | ID=Msa0427010;Name=Msa0427010 |
| chr3_2 | mRNA | 77701912 | 77704158 | 77701912 | ID=Msa0427010-mRNA-1;Parent=Msa0427010;Name=Msa0427010-mRNA-1;_AED=0.26;_eAED=0.29;_QI=0|0|0|0.66|1|1|3|0|694 |
| chr3_2 | exon | 77701912 | 77701968 | 77701912 | ID=Msa0427010-mRNA-1:exon:20309;Parent=Msa0427010-mRNA-1 |
| chr3_2 | exon | 77702095 | 77703060 | 77702095 | ID=Msa0427010-mRNA-1:exon:20310;Parent=Msa0427010-mRNA-1 |
| chr3_2 | exon | 77703097 | 77704158 | 77703097 | ID=Msa0427010-mRNA-1:exon:20311;Parent=Msa0427010-mRNA-1 |
| chr3_2 | CDS | 77701912 | 77701968 | 77701912 | ID=Msa0427010-mRNA-1:cds;Parent=Msa0427010-mRNA-1 |
| chr3_2 | CDS | 77702095 | 77703060 | 77702095 | ID=Msa0427010-mRNA-1:cds;Parent=Msa0427010-mRNA-1 |
| chr3_2 | CDS | 77703097 | 77704158 | 77703097 | ID=Msa0427010-mRNA-1:cds;Parent=Msa0427010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
