AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0431480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431480 MtrunA17_Chr3g0082121 31.548 691 385 17 41 727 49 655 6.94e-99 323
Msa0431480 MtrunA17_Chr2g0324011 30.236 635 367 12 36 665 8 571 1.20e-98 319
Msa0431480 MtrunA17_Chr3g0088371 72.928 181 39 2 618 788 1 181 1.48e-83 265
Msa0431480 MtrunA17_Chr1g0202341 29.302 645 375 17 24 662 40 609 6.56e-78 266
Msa0431480 MtrunA17_Chr8g0363841 28.140 629 379 12 40 665 22 580 3.37e-73 253
Msa0431480 MtrunA17_Chr1g0203721 26.026 780 452 20 1 739 16 711 7.15e-72 253
Msa0431480 MtrunA17_Chr2g0296781 27.541 679 406 20 39 708 1 602 1.35e-67 239
Msa0431480 MtrunA17_Chr5g0448761 25.177 707 450 14 31 728 56 692 5.32e-67 238
Msa0431480 MtrunA17_Chr6g0458391 26.667 630 359 15 41 662 231 765 1.45e-63 228
Msa0431480 MtrunA17_Chr6g0477261 28.843 527 317 14 180 699 7 482 2.21e-62 223
Msa0431480 MtrunA17_Chr1g0164591 35.000 320 193 4 131 448 1 307 3.34e-62 213
Msa0431480 MtrunA17_Chr5g0441581 24.566 749 459 21 14 750 12 666 5.98e-59 214
Msa0431480 MtrunA17_Chr2g0287651 25.437 629 389 13 39 662 79 632 3.76e-58 214
Msa0431480 MtrunA17_Chr1g0207551 24.750 699 428 18 31 718 30 641 1.22e-53 200
Msa0431480 MtrunA17_Chr7g0258861 35.294 306 174 6 36 336 8 294 1.52e-53 188
Msa0431480 MtrunA17_Chr5g0440451 24.202 752 449 21 1 721 1 662 3.21e-53 200
Msa0431480 MtrunA17_Chr1g0172971 80.342 117 22 1 1 116 1 117 7.55e-53 193
Msa0431480 MtrunA17_Chr1g0196541 24.880 627 397 15 39 662 1 556 9.62e-53 196
Msa0431480 MtrunA17_Chr2g0329031 24.457 736 441 20 41 757 20 659 3.00e-52 195
Msa0431480 MtrunA17_Chr1g0198761 26.493 653 382 20 26 660 38 610 7.78e-51 191
Msa0431480 MtrunA17_Chr3g0118611 27.237 503 306 10 221 719 111 557 6.38e-50 189
Msa0431480 MtrunA17_Chr3g0080351 24.313 691 427 14 34 718 75 675 2.99e-48 184
Msa0431480 MtrunA17_Chr2g0290391 25.701 642 374 19 38 660 54 611 2.98e-46 177
Msa0431480 MtrunA17_Chr2g0287061 24.405 672 371 20 41 694 189 741 3.55e-46 177
Msa0431480 MtrunA17_Chr1g0203051 24.580 476 329 6 50 523 94 541 7.60e-45 172
Msa0431480 MtrunA17_Chr2g0276841 25.786 636 376 21 49 670 84 637 1.78e-43 168
Msa0431480 MtrunA17_Chr5g0448511 25.000 452 285 9 216 665 1 400 1.23e-42 164
Msa0431480 MtrunA17_Chr5g0431001 27.716 451 281 12 40 473 66 488 2.09e-41 159
Msa0431480 MtrunA17_Chr2g0291591 26.205 477 297 13 37 499 66 501 3.60e-41 159
Msa0431480 MtrunA17_Chr6g0475591 90.411 73 7 0 188 260 1 73 5.93e-40 141
Msa0431480 MtrunA17_Chr2g0291581 23.445 627 399 13 38 662 74 621 5.31e-39 154
Msa0431480 MtrunA17_Chr2g0294841 26.441 503 317 15 3 482 7 479 2.94e-35 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431480 AT4G38180.1 27.925 641 382 15 32 665 70 637 5.29e-69 244
Msa0431480 AT4G15090.1 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0431480 AT4G15090.5 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0431480 AT4G15090.3 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0431480 AT4G15090.2 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0431480 AT4G15090.4 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0431480 AT2G27110.2 26.633 597 364 17 127 719 108 634 1.52e-52 197
Msa0431480 AT2G27110.1 26.633 597 364 17 127 719 108 634 1.52e-52 197
Msa0431480 AT2G27110.3 27.701 509 311 13 213 719 36 489 3.70e-52 194
Msa0431480 AT3G06250.2 24.803 633 353 16 34 661 189 703 3.66e-50 189
Msa0431480 AT3G06250.1 24.803 633 353 16 34 661 189 703 3.66e-50 189
Msa0431480 AT3G06250.3 24.803 633 353 16 34 661 189 703 3.66e-50 189
Msa0431480 AT1G76320.3 24.704 676 413 19 50 719 12 597 2.79e-49 186
Msa0431480 AT1G76320.1 24.184 674 419 17 50 719 12 597 1.36e-48 184
Msa0431480 AT1G76320.4 24.184 674 419 17 50 719 12 597 1.36e-48 184
Msa0431480 AT1G76320.2 24.184 674 419 17 50 719 12 597 1.46e-48 184
Msa0431480 AT3G22170.2 22.678 732 445 17 34 753 69 691 1.59e-47 182
Msa0431480 AT3G22170.1 22.678 732 445 17 34 753 69 691 1.59e-47 182
Msa0431480 AT5G18960.2 24.186 645 361 18 26 661 202 727 9.80e-45 174
Msa0431480 AT5G18960.1 24.186 645 361 18 26 661 202 727 9.80e-45 174
Msa0431480 AT4G38170.1 25.058 431 265 10 235 662 24 399 3.81e-43 165
Msa0431480 AT1G10240.2 24.398 623 379 18 49 659 62 604 2.11e-40 159
Msa0431480 AT1G10240.1 24.398 623 379 18 49 659 62 604 2.11e-40 159
Msa0431480 AT5G28530.1 23.318 639 393 17 40 660 60 619 2.52e-39 156
Msa0431480 AT2G32250.5 24.161 745 428 22 4 743 10 622 5.40e-39 155
Msa0431480 AT2G32250.2 24.161 745 428 22 4 743 10 622 9.79e-39 155
Msa0431480 AT2G32250.4 24.161 745 428 22 4 743 10 622 9.79e-39 155
Msa0431480 AT2G32250.6 24.161 745 428 22 4 743 10 622 1.32e-38 155
Msa0431480 AT2G32250.1 24.161 745 428 22 4 743 10 622 1.32e-38 155
Msa0431480 AT2G32250.3 24.161 745 428 22 4 743 10 622 1.32e-38 155
Msa0431480 AT5G28530.3 23.161 639 390 18 40 660 60 615 2.17e-38 153
Msa0431480 AT5G28530.2 23.161 639 390 18 40 660 60 615 2.17e-38 153
Msa0431480 AT2G32250.8 24.177 699 396 20 50 743 12 581 4.54e-38 153
Msa0431480 AT2G32250.7 24.177 699 396 20 50 743 12 581 4.59e-38 153
Msa0431480 AT1G80010.1 23.944 639 391 22 41 662 101 661 1.03e-35 145
Msa0431480 AT1G52520.1 21.990 623 410 15 41 662 91 638 5.62e-31 130
Msa0431480 AT4G19990.1 28.731 268 184 4 219 483 106 369 2.54e-27 119
Msa0431480 AT4G19990.1 34.328 134 74 3 591 722 438 559 1.47e-11 68.6
Msa0431480 AT4G19990.5 28.731 268 184 4 219 483 163 426 2.69e-27 119
Msa0431480 AT4G19990.5 34.328 134 74 3 591 722 495 616 1.55e-11 68.6
Msa0431480 AT4G19990.3 28.731 268 184 4 219 483 163 426 2.92e-27 119
Msa0431480 AT4G19990.3 34.328 134 74 3 591 722 495 616 1.52e-11 68.6
Msa0431480 AT4G19990.4 28.731 268 184 4 219 483 163 426 2.92e-27 119
Msa0431480 AT4G19990.4 34.328 134 74 3 591 722 495 616 1.52e-11 68.6
Msa0431480 AT4G19990.7 28.731 268 184 4 219 483 177 440 3.42e-27 119
Msa0431480 AT4G19990.7 34.328 134 74 3 591 722 509 630 1.77e-11 68.6
Msa0431480 AT4G19990.6 28.731 268 184 4 219 483 163 426 4.37e-27 118
Msa0431480 AT4G19990.6 34.328 134 74 3 591 722 495 616 1.40e-11 68.9
Msa0431480 AT4G19990.2 28.731 268 184 4 219 483 163 426 4.37e-27 118
Msa0431480 AT4G19990.2 34.328 134 74 3 591 722 495 616 1.40e-11 68.9
Msa0431480 AT5G28530.4 21.145 629 356 20 40 660 60 556 8.35e-21 98.2

Find 136 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 3_2:-83528403 Msa0431480:CDS
TTTCGATGAGTTAACTAATT+TGG 0.156761 3_2:-83528712 Msa0431480:CDS
AGTCGCTTCTTTGACCTAAT+TGG 0.186128 3_2:+83527577 None:intergenic
CTTTAGTCATTTCAACATTA+TGG 0.194287 3_2:-83528445 Msa0431480:CDS
CAACAAGATTATGCTCTATT+TGG 0.198611 3_2:-83529498 Msa0431480:CDS
TTCATTTCAGCTGCCTTTCT+TGG 0.201003 3_2:-83528993 Msa0431480:intron
TATGGCTTGAGGTTTCTTAT+TGG 0.276008 3_2:+83528866 None:intergenic
CATCGTAAGAGTGTGTTATT+TGG 0.276792 3_2:-83528960 Msa0431480:CDS
TTCTTTGACCTAATTGGATT+TGG 0.299426 3_2:+83527583 None:intergenic
TTAGAAACTAAGCTACTATA+AGG 0.312371 3_2:+83527206 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 3_2:-83528671 Msa0431480:CDS
TGTTCTTGAGGCAGGGAAAA+AGG 0.322946 3_2:-83527731 Msa0431480:CDS
GCCGATATTTATTGTTTGTT+CGG 0.341758 3_2:+83529448 None:intergenic
ACTAGCCTGGTCTGTGTATA+TGG 0.347339 3_2:+83528848 None:intergenic
GGTTTCGAATGTTGATGTTT+TGG 0.354913 3_2:-83528148 Msa0431480:CDS
TATGCATTGGTCTTCAGTTT+GGG 0.370760 3_2:-83528571 Msa0431480:CDS
CTCAACGGTGTTCTTGAGGC+AGG 0.386173 3_2:-83527739 Msa0431480:CDS
AACAATAAATATCGGCCATT+AGG 0.388497 3_2:-83529441 Msa0431480:intron
ACCGAACAAACAATAAATAT+CGG 0.389395 3_2:-83529449 Msa0431480:CDS
TTTCAATTTATCATATCTAA+TGG 0.390380 3_2:-83530361 None:intergenic
GTATGCATTGGTCTTCAGTT+TGG 0.392120 3_2:-83528572 Msa0431480:CDS
TTTGGTCTTTCTTTGAACTT+TGG 0.395048 3_2:+83527601 None:intergenic
GTCTTTAGTGCCAACATTCA+TGG 0.395146 3_2:+83527855 None:intergenic
TTCTCATACTCAACAAGAAC+TGG 0.395633 3_2:+83529978 None:intergenic
AAGAAAGACCAAATCCAATT+AGG 0.397771 3_2:-83527591 Msa0431480:CDS
TTCCTTCAAATACTATTATG+AGG 0.399583 3_2:-83528271 Msa0431480:CDS
TAAAGAATCATGGAAGTCTT+TGG 0.408500 3_2:-83530207 Msa0431480:CDS
CATGTCGTATGTTTGAGAAC+CGG 0.411671 3_2:-83528023 Msa0431480:CDS
GATTATGATCTTCAAACCTT+GGG 0.413114 3_2:+83528100 None:intergenic
ATAACACTGGATTCTCTGTT+AGG 0.417808 3_2:-83530136 Msa0431480:CDS
GGGTTGTCACAGTCGACATT+AGG 0.419786 3_2:-83528065 Msa0431480:CDS
CGATTATGATCTTCAAACCT+TGG 0.425681 3_2:+83528099 None:intergenic
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 3_2:-83529801 Msa0431480:CDS
AGCTGGAATATATTTGAAGT+TGG 0.433136 3_2:-83529919 Msa0431480:CDS
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 3_2:-83529936 Msa0431480:CDS
CGCTTTAAAACATATTGTGC+AGG 0.447633 3_2:+83527922 None:intergenic
CGTTATGCTTGTAACAAAGA+AGG 0.449439 3_2:-83530053 Msa0431480:CDS
GCTTTAATAAATTCTAAAGC+TGG 0.450264 3_2:-83529771 Msa0431480:CDS
ATCTGAGAGTGGACAATTGA+CGG 0.452529 3_2:-83530282 Msa0431480:CDS
TGGTCTTTGCTCATGGCACA+TGG 0.452802 3_2:-83528781 Msa0431480:CDS
AAAGCTGCAACGGAGTAACT+TGG 0.457471 3_2:+83527239 None:intergenic
GGCCTACTTCGGACTTTAAG+TGG 0.458978 3_2:-83528617 Msa0431480:CDS
ATGTCGTATGTTTGAGAACC+GGG 0.461344 3_2:-83528022 Msa0431480:CDS
GGCCGTGCCACATGTTGGCA+CGG 0.463693 3_2:+83527303 None:intergenic
ATATATGATGGAAGGTGTCT+TGG 0.466340 3_2:-83527419 Msa0431480:CDS
GCACGGCCGTGCCACCCTCC+AGG 0.479737 3_2:-83527288 Msa0431480:CDS
GAAGTGATGGGTCAAGGAGT+TGG 0.484292 3_2:-83529726 Msa0431480:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 3_2:+83528269 None:intergenic
TTACAACCAACCCTTTCCTC+TGG 0.485330 3_2:+83529942 None:intergenic
TTTAATTATGCATATAACAC+TGG 0.485542 3_2:-83530149 Msa0431480:CDS
TCTAATGACAACTCGTCAAA+AGG 0.488137 3_2:-83529658 Msa0431480:CDS
CTCAAGTAGCACAAATGCTC+TGG 0.489977 3_2:+83529831 None:intergenic
TATGAGGAGGACACAACAAA+AGG 0.490908 3_2:-83528255 Msa0431480:CDS
ATGATTGTCAAAACCAAGAA+AGG 0.491378 3_2:+83528980 None:intergenic
ATCAGATTTCGACTACAATT+GGG 0.491708 3_2:-83528670 Msa0431480:CDS
CGTCAAAAGGAGATGGTGGC+TGG 0.492100 3_2:-83529645 Msa0431480:CDS
ACATTATGGTTCAGAGAATG+AGG 0.494022 3_2:-83528431 Msa0431480:CDS
GACCGCATAAGCTGACTGTT+GGG 0.496307 3_2:+83528351 None:intergenic
TAGAAACTAAGCTACTATAA+GGG 0.498953 3_2:+83527207 None:intergenic
AAAAGCAGCAAAAGTGGTCC+TGG 0.499540 3_2:+83527270 None:intergenic
GAGAACATCTTATGAAGTGA+TGG 0.499875 3_2:-83529739 Msa0431480:CDS
TGTCTTCTGCAGCATCAACT+TGG 0.502977 3_2:+83529553 None:intergenic
AAATGCTCTGGTTTATGTAA+TGG 0.504865 3_2:+83529843 None:intergenic
CTCATTCAAATCGTATGCAT+TGG 0.507227 3_2:-83528584 Msa0431480:CDS
ATCATAATCGACTTGATGAA+AGG 0.507955 3_2:-83528086 Msa0431480:CDS
TTTAAGTCCGAAAATCGAAA+AGG 0.508080 3_2:+83529687 None:intergenic
GAGGGATAATCATGCTGAGT+TGG 0.508852 3_2:-83528412 Msa0431480:CDS
ATTGGTCTTCAGTTTGGGTG+AGG 0.509410 3_2:-83528566 Msa0431480:CDS
TGTCTATAAGATATATAAGT+GGG 0.514682 3_2:-83529883 Msa0431480:CDS
GATCTTCAAACCTTGGGGAA+AGG 0.519004 3_2:+83528106 None:intergenic
TAAAGAATCGAACAAGTGAA+TGG 0.519618 3_2:+83528463 None:intergenic
TCATAATCGACTTGATGAAA+GGG 0.526860 3_2:-83528085 Msa0431480:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 3_2:+83528274 None:intergenic
ACAAAATAAGAAATCAGATA+AGG 0.530342 3_2:-83530087 Msa0431480:CDS
ACTTCAACAACGCACTAGCC+TGG 0.534735 3_2:+83528835 None:intergenic
TAACAAAGAAGGTTTCAAGA+AGG 0.538422 3_2:-83530042 Msa0431480:CDS
TTGAAGAAAAGCAGCAAAAG+TGG 0.539954 3_2:+83527264 None:intergenic
AATCGAACAAGTGAATGGTC+TGG 0.540971 3_2:+83528468 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 3_2:-83528254 Msa0431480:CDS
AGTGGTCCTGGAGGGTGGCA+CGG 0.544924 3_2:+83527282 None:intergenic
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 3_2:-83530041 Msa0431480:CDS
CATTTAGTGATAAAGAATCA+TGG 0.546005 3_2:-83530217 Msa0431480:CDS
AGGAAAGAATATATGATGGA+AGG 0.546216 3_2:-83527427 Msa0431480:CDS
GCACGGCCCGTGCCAACATG+TGG 0.553838 3_2:-83527310 Msa0431480:CDS
TGGTCTGTGTATATGGCTTG+AGG 0.556772 3_2:+83528855 None:intergenic
CTGAAATCCACCATGAATGT+TGG 0.557140 3_2:-83527865 Msa0431480:CDS
GGCACGGCCGTGCCACATGT+TGG 0.557392 3_2:+83527298 None:intergenic
TTTGGTGTAGTTCCAACAGA+TGG 0.560581 3_2:+83527619 None:intergenic
GTTGTCTATGAACCATCTGT+TGG 0.562937 3_2:-83527631 Msa0431480:CDS
TGAAAATTCAGTTATTGATG+CGG 0.565546 3_2:-83530258 Msa0431480:CDS
GTGATGGGTCAAGGAGTTGG+AGG 0.568802 3_2:-83529723 Msa0431480:CDS
TACACGTGTTTGCGCAGATG+CGG 0.571672 3_2:-83527779 Msa0431480:CDS
ATGTCTATAAGATATATAAG+TGG 0.572287 3_2:-83529884 Msa0431480:CDS
GCCCGTGCCAACATGTGGCA+CGG 0.574074 3_2:-83527305 Msa0431480:CDS
AATGAAACTCTCTCGAAACC+AGG 0.576081 3_2:-83529591 Msa0431480:CDS
GGACCGCATAAGCTGACTGT+TGG 0.579264 3_2:+83528350 None:intergenic
GCCGTGCCACATGTTGGCAC+GGG 0.580157 3_2:+83527304 None:intergenic
GCAAAAGTGGTCCTGGAGGG+TGG 0.583434 3_2:+83527277 None:intergenic
AAGCTGCAACGGAGTAACTT+GGG 0.584967 3_2:+83527240 None:intergenic
TGGTGTATACTTGTTTACTA+CGG 0.585960 3_2:+83528329 None:intergenic
ATATTAACTTCATCTGAGAG+TGG 0.588105 3_2:-83530293 Msa0431480:CDS
TGTCTTGGAGCAAAAGAAAG+AGG 0.588846 3_2:-83527404 Msa0431480:CDS
TCTTATGAAGTGATGGGTCA+AGG 0.589029 3_2:-83529732 Msa0431480:CDS
TCAACGGTGTTCTTGAGGCA+GGG 0.590097 3_2:-83527738 Msa0431480:CDS
ATTTCTCAACGGTGTTCTTG+AGG 0.591378 3_2:-83527743 Msa0431480:CDS
TTGAAGAAAACCTTTCCCCA+AGG 0.594796 3_2:-83528116 Msa0431480:CDS
GCCGTGCCAAGCTTCTGACT+TGG 0.595821 3_2:+83527326 None:intergenic
TGAAGACTTAGAAGGCGTAA+CGG 0.598405 3_2:+83527663 None:intergenic
GACAACTCGTCAAAAGGAGA+TGG 0.599038 3_2:-83529652 Msa0431480:CDS
TCTCTACCAAGTCAGAAGCT+TGG 0.600115 3_2:-83527332 Msa0431480:CDS
TGGAGCAAAAGAAAGAGGAC+TGG 0.601219 3_2:-83527399 Msa0431480:CDS
TTGATATCGTTGTGCTTGAG+TGG 0.601464 3_2:+83527831 None:intergenic
AGAACATCTTATGAAGTGAT+GGG 0.601988 3_2:-83529738 Msa0431480:CDS
AACTCGTCAAAAGGAGATGG+TGG 0.603142 3_2:-83529649 Msa0431480:CDS
GCAAAACAGTAAAGCTGCAA+CGG 0.603376 3_2:+83527229 None:intergenic
ACGTGTTTGCGCAGATGCGG+AGG 0.605934 3_2:-83527776 Msa0431480:CDS
ATCCCAACAGTCAGCTTATG+CGG 0.606153 3_2:-83528353 Msa0431480:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 3_2:-83528268 Msa0431480:CDS
AGAACTGGACTGTCACATGT+TGG 0.620791 3_2:+83529993 None:intergenic
AGCCACTTAAAGTCCGAAGT+AGG 0.621799 3_2:+83528615 None:intergenic
GGGTCAAGGAGTTGGAGGCA+CGG 0.621882 3_2:-83529718 Msa0431480:CDS
AGCAGCAAAAGTGGTCCTGG+AGG 0.624795 3_2:+83527273 None:intergenic
ATTATGATCTTCAAACCTTG+GGG 0.630358 3_2:+83528101 None:intergenic
GGTCTTTGCTCATGGCACAT+GGG 0.639768 3_2:-83528780 Msa0431480:CDS
TTTAGTGCCAACATTCATGG+TGG 0.641441 3_2:+83527858 None:intergenic
CATTATGGTTCAGAGAATGA+GGG 0.643278 3_2:-83528430 Msa0431480:CDS
GATTTCAGCTTATCGACAGA+CGG 0.644926 3_2:+83527880 None:intergenic
GCAGCAAAAGTGGTCCTGGA+GGG 0.646732 3_2:+83527274 None:intergenic
CACGTCGACATAAGAAACCC+CGG 0.652123 3_2:+83528004 None:intergenic
TGAATAAATGAAAAGCAAGA+TGG 0.655697 3_2:+83528309 None:intergenic
GCATCTGAAATATTTCTCAA+CGG 0.661104 3_2:-83527754 Msa0431480:CDS
TCAAGCCATATACACAGACC+AGG 0.664578 3_2:-83528853 Msa0431480:CDS
TGTCGTATGTTTGAGAACCG+GGG 0.673760 3_2:-83528021 Msa0431480:CDS
ACCAAGTCAGAAGCTTGGCA+CGG 0.680106 3_2:-83527327 Msa0431480:CDS
ATGTTGATAATGATAATGAG+AGG 0.683310 3_2:-83528170 Msa0431480:CDS
TGTTGATAATGATAATGAGA+GGG 0.689129 3_2:-83528169 Msa0431480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAGTAAAATATTCTAAA+AGG + chr3_2:83530093-83530112 None:intergenic 10.0%
!!! ATTGTCTTTTATTTTATTTT+AGG - chr3_2:83530113-83530132 Msa0431480:CDS 10.0%
!! TTTAATTATGCATATAACAC+TGG - chr3_2:83527411-83527430 Msa0431480:CDS 20.0%
!! ACAAAATAAGAAATCAGATA+AGG - chr3_2:83527473-83527492 Msa0431480:intron 20.0%
!! ATGTCTATAAGATATATAAG+TGG - chr3_2:83527676-83527695 Msa0431480:CDS 20.0%
!! TGTCTATAAGATATATAAGT+GGG - chr3_2:83527677-83527696 Msa0431480:CDS 20.0%
!!! TGAATGTTTATATTGATTGA+AGG - chr3_2:83528266-83528285 Msa0431480:CDS 20.0%
!!! AATTTAATGTTCTGGTTTAT+GGG - chr3_2:83528294-83528313 Msa0431480:CDS 20.0%
!!! ATGATGAAAAACTGTTTTAA+TGG - chr3_2:83528918-83528937 Msa0431480:CDS 20.0%
!!! TTTTAGGAAAGAATATATGA+TGG - chr3_2:83530129-83530148 Msa0431480:CDS 20.0%
! TGAAAATTCAGTTATTGATG+CGG - chr3_2:83527302-83527321 Msa0431480:CDS 25.0%
! CATTTAGTGATAAAGAATCA+TGG - chr3_2:83527343-83527362 Msa0431480:CDS 25.0%
!!! CTTATTTTGTGAATTGTTCT+TGG + chr3_2:83527463-83527482 None:intergenic 25.0%
!!! GCTTTAATAAATTCTAAAGC+TGG - chr3_2:83527789-83527808 Msa0431480:CDS 25.0%
! ACCGAACAAACAATAAATAT+CGG - chr3_2:83528111-83528130 Msa0431480:CDS 25.0%
! AGTACAAAATACTAACCTAA+TGG + chr3_2:83528137-83528156 None:intergenic 25.0%
! TGAAATTTGAATGAATGTTC+TGG - chr3_2:83528184-83528203 Msa0431480:CDS 25.0%
!! AGGTTTAGAATTTAATGTTC+TGG - chr3_2:83528286-83528305 Msa0431480:CDS 25.0%
!!! GAATTTAATGTTCTGGTTTA+TGG - chr3_2:83528293-83528312 Msa0431480:CDS 25.0%
! TTTCTATTTACACAACACAA+TGG - chr3_2:83528503-83528522 Msa0431480:CDS 25.0%
!! TGTTGTATTTTGTTCTGATT+TGG - chr3_2:83528544-83528563 Msa0431480:CDS 25.0%
! AAAACACCTTGAAAAACATT+CGG + chr3_2:83528756-83528775 None:intergenic 25.0%
! TTTCGATGAGTTAACTAATT+TGG - chr3_2:83528848-83528867 Msa0431480:CDS 25.0%
!!! TGAAAAACTGTTTTAATGGA+AGG - chr3_2:83528922-83528941 Msa0431480:CDS 25.0%
! CTTTAGTCATTTCAACATTA+TGG - chr3_2:83529115-83529134 Msa0431480:intron 25.0%
! TGAATAAATGAAAAGCAAGA+TGG + chr3_2:83529254-83529273 None:intergenic 25.0%
! CATAATAGTATTTGAAGGAA+AGG + chr3_2:83529289-83529308 None:intergenic 25.0%
! TTCCTTCAAATACTATTATG+AGG - chr3_2:83529289-83529308 Msa0431480:intron 25.0%
!!! ATGTTGATAATGATAATGAG+AGG - chr3_2:83529390-83529409 Msa0431480:intron 25.0%
!!! TGTTGATAATGATAATGAGA+GGG - chr3_2:83529391-83529410 Msa0431480:intron 25.0%
!!! GAGGATTTTCTTATTTCTAA+AGG - chr3_2:83529854-83529873 Msa0431480:CDS 25.0%
ATATTAACTTCATCTGAGAG+TGG - chr3_2:83527267-83527286 Msa0431480:CDS 30.0%
TAAAGAATCATGGAAGTCTT+TGG - chr3_2:83527353-83527372 Msa0431480:CDS 30.0%
TAACAAAGAAGGTTTCAAGA+AGG - chr3_2:83527518-83527537 Msa0431480:intron 30.0%
AACAAAGAAGGTTTCAAGAA+GGG - chr3_2:83527519-83527538 Msa0431480:intron 30.0%
TAAAGAAAAACCAGAGGAAA+GGG - chr3_2:83527608-83527627 Msa0431480:CDS 30.0%
! AGCTGGAATATATTTGAAGT+TGG - chr3_2:83527641-83527660 Msa0431480:CDS 30.0%
! AAATGCTCTGGTTTATGTAA+TGG + chr3_2:83527720-83527739 None:intergenic 30.0%
AGAACATCTTATGAAGTGAT+GGG - chr3_2:83527822-83527841 Msa0431480:CDS 30.0%
! GAATCTTCCTTTTCGATTTT+CGG - chr3_2:83527866-83527885 Msa0431480:CDS 30.0%
TTTAAGTCCGAAAATCGAAA+AGG + chr3_2:83527876-83527895 None:intergenic 30.0%
TGGATATCATAGTAAAAACC+TGG + chr3_2:83527990-83528009 None:intergenic 30.0%
!!! AAGACATAGCCAGTATTTTT+TGG - chr3_2:83528024-83528043 Msa0431480:CDS 30.0%
!!! AGACATAGCCAGTATTTTTT+GGG - chr3_2:83528025-83528044 Msa0431480:CDS 30.0%
CAACAAGATTATGCTCTATT+TGG - chr3_2:83528062-83528081 Msa0431480:CDS 30.0%
GCCGATATTTATTGTTTGTT+CGG + chr3_2:83528115-83528134 None:intergenic 30.0%
AACAATAAATATCGGCCATT+AGG - chr3_2:83528119-83528138 Msa0431480:CDS 30.0%
!! ATGTTCTGGTTTAGAATTGA+AGG - chr3_2:83528198-83528217 Msa0431480:CDS 30.0%
CTGGTATATGTGTGTTAATT+TGG - chr3_2:83528223-83528242 Msa0431480:CDS 30.0%
AAACACATATGATCTTTCCA+TGG + chr3_2:83528357-83528376 None:intergenic 30.0%
ATGATTGTCAAAACCAAGAA+AGG + chr3_2:83528583-83528602 None:intergenic 30.0%
! TCAATTCCGAATGTTTTTCA+AGG - chr3_2:83528747-83528766 Msa0431480:CDS 30.0%
!!! GTTTTTCAAGGTGTTTTTCA+TGG - chr3_2:83528759-83528778 Msa0431480:CDS 30.0%
GAGAATGCAAAGAAAAATCT+CGG - chr3_2:83528804-83528823 Msa0431480:CDS 30.0%
AATCAGATTTCGACTACAAT+TGG - chr3_2:83528889-83528908 Msa0431480:CDS 30.0%
ATCAGATTTCGACTACAATT+GGG - chr3_2:83528890-83528909 Msa0431480:CDS 30.0%
TAAAGAATCGAACAAGTGAA+TGG + chr3_2:83529100-83529119 None:intergenic 30.0%
TGGTGTATACTTGTTTACTA+CGG + chr3_2:83529234-83529253 None:intergenic 30.0%
CTCCTCATAATAGTATTTGA+AGG + chr3_2:83529294-83529313 None:intergenic 30.0%
CTTCAAATACTATTATGAGG+AGG - chr3_2:83529292-83529311 Msa0431480:intron 30.0%
! CAAAGTTTTCACAATTGAGA+AGG - chr3_2:83529349-83529368 Msa0431480:intron 30.0%
ATTATGATCTTCAAACCTTG+GGG + chr3_2:83529462-83529481 None:intergenic 30.0%
GATTATGATCTTCAAACCTT+GGG + chr3_2:83529463-83529482 None:intergenic 30.0%
!! ATCATAATCGACTTGATGAA+AGG - chr3_2:83529474-83529493 Msa0431480:CDS 30.0%
!! TCATAATCGACTTGATGAAA+GGG - chr3_2:83529475-83529494 Msa0431480:CDS 30.0%
!!! CTGCACAATATGTTTTAAAG+CGG - chr3_2:83529639-83529658 Msa0431480:CDS 30.0%
! GCATCTGAAATATTTCTCAA+CGG - chr3_2:83529806-83529825 Msa0431480:CDS 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG + chr3_2:83529962-83529981 None:intergenic 30.0%
AAGAAAGACCAAATCCAATT+AGG - chr3_2:83529969-83529988 Msa0431480:CDS 30.0%
TTCTTTGACCTAATTGGATT+TGG + chr3_2:83529980-83529999 None:intergenic 30.0%
! AGGAAAGAATATATGATGGA+AGG - chr3_2:83530133-83530152 Msa0431480:CDS 30.0%
!!! GTGTTTGTTGCTGTTTTCAA+TGG - chr3_2:83527239-83527258 Msa0431480:CDS 35.0%
ATAACACTGGATTCTCTGTT+AGG - chr3_2:83527424-83527443 Msa0431480:CDS 35.0%
CGTTATGCTTGTAACAAAGA+AGG - chr3_2:83527507-83527526 Msa0431480:intron 35.0%
GTCTGCTTAATCCTAAAAAC+AGG - chr3_2:83527544-83527563 Msa0431480:intron 35.0%
TTCTCATACTCAACAAGAAC+TGG + chr3_2:83527585-83527604 None:intergenic 35.0%
GAAAGCTAAAGAAAAACCAG+AGG - chr3_2:83527602-83527621 Msa0431480:CDS 35.0%
CTAAAGAAAAACCAGAGGAA+AGG - chr3_2:83527607-83527626 Msa0431480:CDS 35.0%
CGAGAAGTAAATGAAGTTCA+AGG - chr3_2:83527759-83527778 Msa0431480:CDS 35.0%
GAGAACATCTTATGAAGTGA+TGG - chr3_2:83527821-83527840 Msa0431480:CDS 35.0%
TCTAATGACAACTCGTCAAA+AGG - chr3_2:83527902-83527921 Msa0431480:CDS 35.0%
! TGGTTTAGAATTGAAGGTTC+TGG - chr3_2:83528204-83528223 Msa0431480:CDS 35.0%
CATAAATTCCAAGGCAAGAT+AGG + chr3_2:83528324-83528343 None:intergenic 35.0%
TGTACAGAGCATAAATTCCA+AGG + chr3_2:83528333-83528352 None:intergenic 35.0%
! CATCGTAAGAGTGTGTTATT+TGG - chr3_2:83528600-83528619 Msa0431480:CDS 35.0%
!!! AGACATCAGCTACTTTTGAT+TGG - chr3_2:83528643-83528662 Msa0431480:CDS 35.0%
TATGGCTTGAGGTTTCTTAT+TGG + chr3_2:83528697-83528716 None:intergenic 35.0%
! TTTTTCATGGTCTTTGCTCA+TGG - chr3_2:83528772-83528791 Msa0431480:CDS 35.0%
! TTTTAATGGAAGGCCTACTT+CGG - chr3_2:83528932-83528951 Msa0431480:CDS 35.0%
CTCATTCAAATCGTATGCAT+TGG - chr3_2:83528976-83528995 Msa0431480:CDS 35.0%
!! TATGCATTGGTCTTCAGTTT+GGG - chr3_2:83528989-83529008 Msa0431480:intron 35.0%
! TCTTTCAATGCTTTTCTTCG+TGG - chr3_2:83529059-83529078 Msa0431480:intron 35.0%
ACATTATGGTTCAGAGAATG+AGG - chr3_2:83529129-83529148 Msa0431480:intron 35.0%
CATTATGGTTCAGAGAATGA+GGG - chr3_2:83529130-83529149 Msa0431480:intron 35.0%
! GGTTTCGAATGTTGATGTTT+TGG - chr3_2:83529412-83529431 Msa0431480:intron 35.0%
CGATTATGATCTTCAAACCT+TGG + chr3_2:83529464-83529483 None:intergenic 35.0%
!! TCGACGTGTTTTCAAGATTT+TGG - chr3_2:83529571-83529590 Msa0431480:CDS 35.0%
!! ACGTGTTTTCAAGATTTTGG+AGG - chr3_2:83529574-83529593 Msa0431480:CDS 35.0%
!! TTCAAGATTTTGGAGGTCTT+AGG - chr3_2:83529581-83529600 Msa0431480:CDS 35.0%
!! CGCTTTAAAACATATTGTGC+AGG + chr3_2:83529641-83529660 None:intergenic 35.0%
!!! CACAATATGTTTTAAAGCGG+TGG - chr3_2:83529642-83529661 Msa0431480:CDS 35.0%
!! ACTGCTTTTGAAGACTTAGA+AGG + chr3_2:83529908-83529927 None:intergenic 35.0%
!! ATATATGATGGAAGGTGTCT+TGG - chr3_2:83530141-83530160 Msa0431480:CDS 35.0%
TTGAAGAAAAGCAGCAAAAG+TGG + chr3_2:83530299-83530318 None:intergenic 35.0%
ATCTGAGAGTGGACAATTGA+CGG - chr3_2:83527278-83527297 Msa0431480:CDS 40.0%
!! TCACATGTTGGCCTGTTTTT+AGG + chr3_2:83527558-83527577 None:intergenic 40.0%
!! TCTTATGAAGTGATGGGTCA+AGG - chr3_2:83527828-83527847 Msa0431480:CDS 40.0%
AATGAAACTCTCTCGAAACC+AGG - chr3_2:83527969-83527988 Msa0431480:CDS 40.0%
TCCATCTGCCCAAAAAATAC+TGG + chr3_2:83528036-83528055 None:intergenic 40.0%
ATTTATGCTCTGTACAGCCA+TGG - chr3_2:83528337-83528356 Msa0431480:CDS 40.0%
TCCAGCTATGCAAAGATCAT+AGG - chr3_2:83528447-83528466 Msa0431480:CDS 40.0%
ACCTATGATCTTTGCATAGC+TGG + chr3_2:83528451-83528470 None:intergenic 40.0%
TTCATTTCAGCTGCCTTTCT+TGG - chr3_2:83528567-83528586 Msa0431480:CDS 40.0%
!! GTATGCATTGGTCTTCAGTT+TGG - chr3_2:83528988-83529007 Msa0431480:intron 40.0%
AATCGAACAAGTGAATGGTC+TGG + chr3_2:83529095-83529114 None:intergenic 40.0%
! TCATGCTGAGTTGGACTTTA+AGG - chr3_2:83529157-83529176 Msa0431480:intron 40.0%
TATGAGGAGGACACAACAAA+AGG - chr3_2:83529305-83529324 Msa0431480:intron 40.0%
ATGAGGAGGACACAACAAAA+GGG - chr3_2:83529306-83529325 Msa0431480:intron 40.0%
TTGAAGAAAACCTTTCCCCA+AGG - chr3_2:83529444-83529463 Msa0431480:CDS 40.0%
CATGTCGTATGTTTGAGAAC+CGG - chr3_2:83529537-83529556 Msa0431480:CDS 40.0%
ATGTCGTATGTTTGAGAACC+GGG - chr3_2:83529538-83529557 Msa0431480:CDS 40.0%
!! AAGATTTTGGAGGTCTTAGG+TGG - chr3_2:83529584-83529603 Msa0431480:CDS 40.0%
GATTTCAGCTTATCGACAGA+CGG + chr3_2:83529683-83529702 None:intergenic 40.0%
CTGAAATCCACCATGAATGT+TGG - chr3_2:83529695-83529714 Msa0431480:CDS 40.0%
TTTAGTGCCAACATTCATGG+TGG + chr3_2:83529705-83529724 None:intergenic 40.0%
GTCTTTAGTGCCAACATTCA+TGG + chr3_2:83529708-83529727 None:intergenic 40.0%
TTGATATCGTTGTGCTTGAG+TGG + chr3_2:83529732-83529751 None:intergenic 40.0%
ATTTCTCAACGGTGTTCTTG+AGG - chr3_2:83529817-83529836 Msa0431480:CDS 40.0%
! TGAAGACTTAGAAGGCGTAA+CGG + chr3_2:83529900-83529919 None:intergenic 40.0%
GTTGTCTATGAACCATCTGT+TGG - chr3_2:83529929-83529948 Msa0431480:CDS 40.0%
! TTTGGTGTAGTTCCAACAGA+TGG + chr3_2:83529944-83529963 None:intergenic 40.0%
AGTCGCTTCTTTGACCTAAT+TGG + chr3_2:83529986-83530005 None:intergenic 40.0%
TGTCTTGGAGCAAAAGAAAG+AGG - chr3_2:83530156-83530175 Msa0431480:CDS 40.0%
GCAAAACAGTAAAGCTGCAA+CGG + chr3_2:83530334-83530353 None:intergenic 40.0%
AGAACTGGACTGTCACATGT+TGG + chr3_2:83527570-83527589 None:intergenic 45.0%
GAAAAACCAGAGGAAAGGGT+TGG - chr3_2:83527612-83527631 Msa0431480:CDS 45.0%
TTACAACCAACCCTTTCCTC+TGG + chr3_2:83527621-83527640 None:intergenic 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG - chr3_2:83527624-83527643 Msa0431480:CDS 45.0%
CTCAAGTAGCACAAATGCTC+TGG + chr3_2:83527732-83527751 None:intergenic 45.0%
GACAACTCGTCAAAAGGAGA+TGG - chr3_2:83527908-83527927 Msa0431480:CDS 45.0%
AACTCGTCAAAAGGAGATGG+TGG - chr3_2:83527911-83527930 Msa0431480:CDS 45.0%
TGTCTTCTGCAGCATCAACT+TGG + chr3_2:83528010-83528029 None:intergenic 45.0%
!!! GCCAGTATTTTTTGGGCAGA+TGG - chr3_2:83528032-83528051 Msa0431480:CDS 45.0%
TGGTCTGTGTATATGGCTTG+AGG + chr3_2:83528708-83528727 None:intergenic 45.0%
TCAAGCCATATACACAGACC+AGG - chr3_2:83528707-83528726 Msa0431480:CDS 45.0%
! ACTAGCCTGGTCTGTGTATA+TGG + chr3_2:83528715-83528734 None:intergenic 45.0%
AGCCACTTAAAGTCCGAAGT+AGG + chr3_2:83528948-83528967 None:intergenic 45.0%
!! ATTGGTCTTCAGTTTGGGTG+AGG - chr3_2:83528994-83529013 Msa0431480:intron 45.0%
! GTGAGGTCACATTTTACAGC+TGG - chr3_2:83529011-83529030 Msa0431480:intron 45.0%
GAGGGATAATCATGCTGAGT+TGG - chr3_2:83529148-83529167 Msa0431480:intron 45.0%
ATCCCAACAGTCAGCTTATG+CGG - chr3_2:83529207-83529226 Msa0431480:intron 45.0%
GATCTTCAAACCTTGGGGAA+AGG + chr3_2:83529457-83529476 None:intergenic 45.0%
TGTCGTATGTTTGAGAACCG+GGG - chr3_2:83529539-83529558 Msa0431480:CDS 45.0%
TGTTCTTGAGGCAGGGAAAA+AGG - chr3_2:83529829-83529848 Msa0431480:CDS 45.0%
TGGAGCAAAAGAAAGAGGAC+TGG - chr3_2:83530161-83530180 Msa0431480:CDS 45.0%
TCTCTACCAAGTCAGAAGCT+TGG - chr3_2:83530228-83530247 Msa0431480:CDS 45.0%
AAAAGCAGCAAAAGTGGTCC+TGG + chr3_2:83530293-83530312 None:intergenic 45.0%
AAGCTGCAACGGAGTAACTT+GGG + chr3_2:83530323-83530342 None:intergenic 45.0%
AAAGCTGCAACGGAGTAACT+TGG + chr3_2:83530324-83530343 None:intergenic 45.0%
!! GAAGTGATGGGTCAAGGAGT+TGG - chr3_2:83527834-83527853 Msa0431480:CDS 50.0%
TGGGTGATCCTATCTTGCCT+TGG - chr3_2:83528313-83528332 Msa0431480:CDS 50.0%
ACTTCAACAACGCACTAGCC+TGG + chr3_2:83528728-83528747 None:intergenic 50.0%
TGGTCTTTGCTCATGGCACA+TGG - chr3_2:83528779-83528798 Msa0431480:CDS 50.0%
GGTCTTTGCTCATGGCACAT+GGG - chr3_2:83528780-83528799 Msa0431480:CDS 50.0%
GGCCTACTTCGGACTTTAAG+TGG - chr3_2:83528943-83528962 Msa0431480:CDS 50.0%
GACCGCATAAGCTGACTGTT+GGG + chr3_2:83529212-83529231 None:intergenic 50.0%
GGGTTGTCACAGTCGACATT+AGG - chr3_2:83529495-83529514 Msa0431480:CDS 50.0%
CACGTCGACATAAGAAACCC+CGG + chr3_2:83529559-83529578 None:intergenic 50.0%
TACACGTGTTTGCGCAGATG+CGG - chr3_2:83529781-83529800 Msa0431480:CDS 50.0%
TCAACGGTGTTCTTGAGGCA+GGG - chr3_2:83529822-83529841 Msa0431480:CDS 50.0%
ACCAAGTCAGAAGCTTGGCA+CGG - chr3_2:83530233-83530252 Msa0431480:CDS 50.0%
!! GTGATGGGTCAAGGAGTTGG+AGG - chr3_2:83527837-83527856 Msa0431480:CDS 55.0%
! CGTCAAAAGGAGATGGTGGC+TGG - chr3_2:83527915-83527934 Msa0431480:CDS 55.0%
GGACCGCATAAGCTGACTGT+TGG + chr3_2:83529213-83529232 None:intergenic 55.0%
CTCAACGGTGTTCTTGAGGC+AGG - chr3_2:83529821-83529840 Msa0431480:CDS 55.0%
TGAGGCAGGGAAAAAGGCAG+AGG - chr3_2:83529835-83529854 Msa0431480:CDS 55.0%
GCAGCAAAAGTGGTCCTGGA+GGG + chr3_2:83530289-83530308 None:intergenic 55.0%
AGCAGCAAAAGTGGTCCTGG+AGG + chr3_2:83530290-83530309 None:intergenic 55.0%
GGGTCAAGGAGTTGGAGGCA+CGG - chr3_2:83527842-83527861 Msa0431480:CDS 60.0%
ACGTGTTTGCGCAGATGCGG+AGG - chr3_2:83529784-83529803 Msa0431480:CDS 60.0%
GCCGTGCCAAGCTTCTGACT+TGG + chr3_2:83530237-83530256 None:intergenic 60.0%
GCAAAAGTGGTCCTGGAGGG+TGG + chr3_2:83530286-83530305 None:intergenic 60.0%
GCCCGTGCCAACATGTGGCA+CGG - chr3_2:83530255-83530274 Msa0431480:CDS 65.0%
GCCGTGCCACATGTTGGCAC+GGG + chr3_2:83530259-83530278 None:intergenic 65.0%
GGCCGTGCCACATGTTGGCA+CGG + chr3_2:83530260-83530279 None:intergenic 65.0%
AGTGGTCCTGGAGGGTGGCA+CGG + chr3_2:83530281-83530300 None:intergenic 65.0%
GCACGGCCCGTGCCAACATG+TGG - chr3_2:83530250-83530269 Msa0431480:CDS 70.0%
GGCACGGCCGTGCCACATGT+TGG + chr3_2:83530265-83530284 None:intergenic 70.0%
! GCACGGCCGTGCCACCCTCC+AGG - chr3_2:83530272-83530291 Msa0431480:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 83527213 83530369 83527213 ID=Msa0431480;Name=Msa0431480
chr3_2 mRNA 83527213 83530369 83527213 ID=Msa0431480-mRNA-1;Parent=Msa0431480;Name=Msa0431480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=45|0.5|0.33|0.66|1|1|3|0|850
chr3_2 exon 83527213 83527447 83527213 ID=Msa0431480-mRNA-1:exon:23401;Parent=Msa0431480-mRNA-1
chr3_2 exon 83527571 83529005 83527571 ID=Msa0431480-mRNA-1:exon:23400;Parent=Msa0431480-mRNA-1
chr3_2 exon 83529442 83530369 83529442 ID=Msa0431480-mRNA-1:exon:23399;Parent=Msa0431480-mRNA-1
chr3_2 five_prime_UTR 83530325 83530369 83530325 ID=Msa0431480-mRNA-1:five_prime_utr;Parent=Msa0431480-mRNA-1
chr3_2 CDS 83529442 83530324 83529442 ID=Msa0431480-mRNA-1:cds;Parent=Msa0431480-mRNA-1
chr3_2 CDS 83527571 83529005 83527571 ID=Msa0431480-mRNA-1:cds;Parent=Msa0431480-mRNA-1
chr3_2 CDS 83527213 83527447 83527213 ID=Msa0431480-mRNA-1:cds;Parent=Msa0431480-mRNA-1
Gene Sequence

>Msa0431480

ATGGATTTGATATTAACTTCATCTGAGAGTGGACAATTGACGGTTGAAAATTCAGTTATTGATGCGGATAATTCTCAATGTTACTCATTTAGTGATAAAGAATCATGGAAGTCTTTGGTCTTTAAATCTATAAAAGAGATTGAAGATTTTTATTTTAATTATGCATATAACACTGGATTCTCTGTTAGGAGTATGTTGAAGTCCAAGAACAATTCACAAAATAAGAAATCAGATAAGGTACATTATGTGCGTTATGCTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAAAAACAGGCCAACATGTGACAGTCCAGTTCTTGTTGAGTATGAGAAAGCTAAAGAAAAACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGTTGGATGAAGCGTTGAATGTCTATAAGATATATAAGTGGGAAGTTGATCACTGTCATCCATTACATAAACCAGAGCATTTGTGCTACTTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACATCTTATGAAGTGATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGATTTTCGGACTTAAAGAACTATCTAATGACAACTCGTCAAAAGGAGATGGTGGCTGGTGAAGCAACTGTTATTCAAGAATTCTTTAGAAATGAAACTCTCTCGAAACCAGGTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCCAGTATTTTTTGGGCAGATGGAATTATGCAACAAGATTATGCTCTATTTGGTGATGTTGTCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGCTGCCTTTCTTGGTTTTGACAATCATCGTAAGAGTGTGTTATTTGGTGCTGCGCTACTGTATGATGAGACATCAGCTACTTTTGATTGGTTGTTTACAACTTTTTTGAAGTGTATGTCCAATAAGAAACCTCAAGCCATATACACAGACCAGGCTAGTGCGTTGTTGAAGTCAATTCCGAATGTTTTTCAAGGTGTTTTTCATGGTCTTTGCTCATGGCACATGGGAGAGAATGCAAAGAAAAATCTCGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTCGAAGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAACTGTTTTAATGGAAGGCCTACTTCGGACTTTAAGTGGCTTGTTCAAACTCATTCAAATCGTATGCATTGGTCTTCAGTTTGGGTGAGGTCACATTTTACAGCTGGTTTGAAAACGACACAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTTATGCGGTCCGTAGTAAACAAGTATACACCATCTTGCTTTTCATTTATTCACAGTCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGAATTGATCAAGTTCTTCAAAGTTTTCACAATTGAGAAGGTTGATTATAATTACGATGATGTTGATAATGATAATGAGAGGGTTTCGAATGTTGATGTTTTGGATGCAGAATTTGAAGAAAACCTTTCCCCAAGGTTTGAAGATCATAATCGACTTGATGAAAGGGTTGTCACAGTCGACATTAGGAGCAAAAGTTTTACTTGTTCATGTCGTATGTTTGAGAACCGGGGTTTCTTATGTCGACGTGTTTTCAAGATTTTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTCAAGCACAACGATATCAACAAATTTGTGCTGTTACAGTTCAGCTTTCTACACGTGTTTGCGCAGATGCGGAGGCATCTGAAATATTTCTCAACGGTGTTCTTGAGGCAGGGAAAAAGGCAGAGGATTTTCTTATTTCTAAAGGTATTCATACAGATCGATCATCCGTTACGCCTTCTAAGTCTTCAAAAGCAGTTGTTGTCTATGAACCATCTGTTGGAACTACACCAAAGTTCAAAGAAAGACCAAATCCAATTAGGTCAAAGAAGCGACTTGATGAGAAAGAATATATGATGGAAGGTGTCTTGGAGCAAAAGAAAGAGGACTGGAGCAAATACAGTGCAAAACTACGAAGATATGAGACAAAAATATGTCTCTACCAAGTCAGAAGCTTGGCACGGCCCGTGCCAACATGTGGCACGGCCGTGCCACCCTCCAGGACCACTTTTGCTGCTTTTCTTCAAGCCCAAGTTACTCCGTTGCAGCTTTACTGTTTTGCCCTTATAGTAGCTTAG
Protein sequence

>Msa0431480

MDLILTSSESGQLTVENSVIDADNSQCYSFSDKESWKSLVFKSIKEIEDFYFNYAYNTGFSVRSMLKSKNNSQNKKSDKVHYVRYACNKEGFKKGSLLNPKNRPTCDSPVLVEYEKAKEKPEERVGCKAGIYLKLDEALNVYKIYKWEVDHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTTRQKEMVAGEATVIQEFFRNETLSKPGFYYDIQVDAAEDIASIFWADGIMQQDYALFGDVVSFDTTYRTNNKYRPLAAFLGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCMSNKKPQAIYTDQASALLKSIPNVFQGVFHGLCSWHMGENAKKNLGSRANSAFFDELTNLVSNVEDESDFDYNWDQMMKNCFNGRPTSDFKWLVQTHSNRMHWSSVWVRSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFSFIHSQYDLSFKYYYEEDTTKGSELIKFFKVFTIEKVDYNYDDVDNDNERVSNVDVLDAEFEENLSPRFEDHNRLDERVVTVDIRSKSFTCSCRMFENRGFLCRRVFKILEVLGGHVQYHFLKTIPAQYVLKRWTRDVRPSVDKLKSTMNVGTKDTTQAQRYQQICAVTVQLSTRVCADAEASEIFLNGVLEAGKKAEDFLISKGIHTDRSSVTPSKSSKAVVVYEPSVGTTPKFKERPNPIRSKKRLDEKEYMMEGVLEQKKEDWSKYSAKLRRYETKICLYQVRSLARPVPTCGTAVPPSRTTFAAFLQAQVTPLQLYCFALIVA*