AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0433430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433430 MtrunA17_Chr3g0139021 81.818 451 32 4 1 451 1 401 0.0 663
Msa0433430 MtrunA17_Chr1g0147881 61.006 159 52 5 279 432 178 331 7.35e-56 188
Msa0433430 MtrunA17_Chr1g0147881 42.723 213 85 9 1 179 1 210 4.98e-28 114
Msa0433430 MtrunA17_Chr4g0071521 62.143 140 43 4 281 419 174 304 1.87e-51 176
Msa0433430 MtrunA17_Chr4g0071521 30.469 256 122 9 1 219 1 237 2.60e-13 70.5
Msa0433430 MtrunA17_Chr7g0228941 92.593 81 5 1 339 419 31 110 2.55e-48 161
Msa0433430 MtrunA17_Chr4g0053281 58.065 124 50 1 296 417 200 323 4.36e-41 149
Msa0433430 MtrunA17_Chr5g0401821 58.621 116 47 1 303 417 141 256 6.39e-39 141
Msa0433430 MtrunA17_Chr1g0184691 62.500 80 30 0 338 417 271 350 2.68e-31 123
Msa0433430 MtrunA17_Chr2g0293481 48.454 97 45 2 326 417 228 324 5.08e-24 104
Msa0433430 MtrunA17_Chr2g0284321 52.439 82 38 1 337 417 11 92 8.26e-24 99.0
Msa0433430 MtrunA17_Chr2g0319961 49.462 93 31 2 336 417 50 137 5.53e-23 97.8
Msa0433430 MtrunA17_Chr7g0248691 43.396 106 49 3 312 417 117 211 2.69e-22 97.4
Msa0433430 MtrunA17_Chr2g0289181 56.250 64 28 0 354 417 8 71 3.02e-21 92.4
Msa0433430 MtrunA17_Chr8g0379461 40.952 105 55 2 320 417 29 133 3.10e-21 92.4
Msa0433430 MtrunA17_Chr8g0348311 50.000 80 39 1 338 417 134 212 1.65e-20 92.4
Msa0433430 MtrunA17_Chr7g0270051 43.023 86 40 1 341 417 25 110 2.13e-20 90.5
Msa0433430 MtrunA17_Chr8g0383351 31.674 221 111 9 232 417 1 216 1.14e-18 85.1
Msa0433430 MtrunA17_Chr8g0387501 58.333 60 25 0 360 419 129 188 3.89e-18 84.3
Msa0433430 MtrunA17_Chr5g0418781 44.706 85 46 1 336 420 100 183 4.85e-18 84.0
Msa0433430 MtrunA17_Chr2g0288871 48.649 74 38 0 344 417 289 362 2.11e-17 84.7
Msa0433430 MtrunA17_Chr7g0238921 37.615 109 53 3 339 436 106 210 2.34e-17 82.8
Msa0433430 MtrunA17_Chr1g0202461 43.373 83 46 1 336 417 236 318 2.55e-17 83.6
Msa0433430 MtrunA17_Chr1g0194481 40.217 92 54 1 326 417 124 214 4.45e-17 82.0
Msa0433430 MtrunA17_Chr3g0099641 45.946 74 40 0 344 417 235 308 6.43e-17 82.8
Msa0433430 MtrunA17_Chr3g0129361 51.613 62 29 1 356 417 140 200 8.06e-17 79.3
Msa0433430 MtrunA17_Chr2g0322391 47.297 74 39 0 344 417 333 406 8.39e-17 82.8
Msa0433430 MtrunA17_Chr5g0443131 47.222 72 37 1 347 418 144 214 9.20e-17 80.9
Msa0433430 MtrunA17_Chr7g0270191 38.614 101 60 2 317 417 103 201 9.84e-17 80.5
Msa0433430 MtrunA17_Chr8g0335811 44.706 85 43 3 336 417 127 210 1.07e-16 79.0
Msa0433430 MtrunA17_Chr4g0075201 47.297 74 39 0 344 417 251 324 1.20e-16 82.0
Msa0433430 MtrunA17_Chr7g0270831 45.946 74 40 0 344 417 200 273 2.40e-16 80.9
Msa0433430 MtrunA17_Chr4g0051881 45.070 71 38 1 347 417 165 234 3.59e-16 79.3
Msa0433430 MtrunA17_Chr5g0445311 47.297 74 38 1 344 417 348 420 3.88e-16 80.9
Msa0433430 MtrunA17_Chr1g0150281 52.632 57 27 0 361 417 141 197 4.19e-16 78.6
Msa0433430 MtrunA17_Chr5g0432161 48.052 77 39 1 341 417 402 477 5.29e-16 80.5
Msa0433430 MtrunA17_Chr3g0101131 43.678 87 42 2 344 424 399 484 5.64e-16 80.5
Msa0433430 MtrunA17_Chr3g0106491 47.436 78 40 1 340 417 345 421 8.32e-16 79.7
Msa0433430 MtrunA17_Chr7g0263531 52.239 67 31 1 352 418 353 418 8.77e-16 79.3
Msa0433430 MtrunA17_Chr7g0263531 45.122 82 38 4 356 436 184 259 7.28e-13 70.1
Msa0433430 MtrunA17_Chr2g0294231 45.333 75 40 1 343 417 186 259 1.37e-15 78.2
Msa0433430 MtrunA17_Chr4g0001361 41.379 87 44 2 351 434 150 232 1.93e-15 77.0
Msa0433430 MtrunA17_Chr2g0333851 36.047 86 43 1 344 417 141 226 2.00e-15 77.0
Msa0433430 MtrunA17_Chr7g0216891 48.101 79 33 2 341 417 204 276 2.05e-15 78.6
Msa0433430 MtrunA17_Chr4g0060271 47.368 76 36 3 344 417 239 312 2.24e-15 78.6
Msa0433430 MtrunA17_Chr1g0150801 43.662 71 39 1 347 417 89 158 2.38e-15 73.6
Msa0433430 MtrunA17_Chr7g0243891 31.447 159 97 3 259 417 284 430 2.71e-15 78.2
Msa0433430 MtrunA17_Chr7g0218081 53.226 62 28 1 356 417 406 466 3.19e-15 77.8
Msa0433430 MtrunA17_Chr7g0218081 46.053 76 38 3 357 431 224 297 1.46e-13 72.8
Msa0433430 MtrunA17_Chr3g0136961 45.455 66 34 1 361 426 139 202 3.21e-15 76.3
Msa0433430 MtrunA17_Chr3g0079691 39.604 101 55 2 322 417 452 551 3.51e-15 78.2
Msa0433430 MtrunA17_Chr3g0079691 47.368 57 28 2 361 417 281 335 2.73e-11 65.9
Msa0433430 MtrunA17_Chr1g0150271 51.667 60 29 0 358 417 99 158 4.24e-15 75.1
Msa0433430 MtrunA17_Chr8g0387981 40.816 98 46 3 336 422 100 196 4.60e-15 76.3
Msa0433430 MtrunA17_Chr4g0074001 55.000 60 26 1 358 417 357 415 5.26e-15 77.0
Msa0433430 MtrunA17_Chr4g0051181 46.667 75 36 1 343 417 230 300 6.97e-15 76.6
Msa0433430 MtrunA17_Chr4g0068541 44.595 74 40 1 344 417 192 264 9.33e-15 75.9
Msa0433430 MtrunA17_Chr7g0249311 35.821 134 60 5 318 431 330 457 9.93e-15 76.6
Msa0433430 MtrunA17_Chr7g0249311 43.939 66 35 2 356 421 175 238 6.99e-11 64.3
Msa0433430 MtrunA17_Chr2g0302391 41.333 75 44 0 344 418 195 269 1.64e-14 75.1
Msa0433430 MtrunA17_Chr1g0189391 41.584 101 46 4 329 417 55 154 1.71e-14 74.3
Msa0433430 MtrunA17_Chr5g0418191 50.000 62 30 1 356 417 316 376 1.92e-14 75.1
Msa0433430 MtrunA17_Chr5g0418191 47.761 67 32 3 352 417 142 206 1.73e-11 65.9
Msa0433430 MtrunA17_Chr4g0004911 42.857 77 43 1 341 417 317 392 2.26e-14 75.1
Msa0433430 MtrunA17_Chr6g0485431 39.806 103 49 3 327 417 110 211 3.52e-14 73.6
Msa0433430 MtrunA17_Chr7g0249301 46.154 78 38 2 343 417 272 348 7.49e-14 72.8
Msa0433430 MtrunA17_Chr7g0249301 49.123 57 27 2 361 417 63 117 6.13e-11 63.9
Msa0433430 MtrunA17_Chr4g0042831 48.387 62 31 1 356 417 274 334 1.07e-13 72.4
Msa0433430 MtrunA17_Chr7g0275531 42.553 94 46 5 336 424 92 182 1.40e-13 71.6
Msa0433430 MtrunA17_Chr1g0188941 40.260 77 45 1 341 417 32 107 4.08e-13 65.9
Msa0433430 MtrunA17_Chr3g0126391 52.632 57 25 1 361 415 134 190 6.38e-13 69.7
Msa0433430 MtrunA17_Chr7g0224801 45.161 62 33 1 356 417 89 149 1.64e-12 65.5
Msa0433430 MtrunA17_Chr3g0129321 41.935 62 35 1 357 418 115 175 3.03e-12 65.9
Msa0433430 MtrunA17_Chr8g0383251 44.262 61 33 1 357 417 105 164 3.42e-12 65.1
Msa0433430 MtrunA17_Chr5g0447701 43.662 71 39 1 347 417 239 308 7.48e-12 67.0
Msa0433430 MtrunA17_Chr4g0025051 45.614 57 31 0 361 417 336 392 9.62e-12 67.0
Msa0433430 MtrunA17_Chr4g0025061 40.580 69 40 1 350 417 349 417 2.07e-11 66.2
Msa0433430 MtrunA17_Chr8g0347251 49.123 57 27 1 361 415 137 193 7.21e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433430 AT4G31550.2 63.690 168 52 4 272 434 152 315 8.75e-63 206
Msa0433430 AT4G31550.2 35.521 259 105 9 1 219 1 237 2.87e-29 117
Msa0433430 AT4G31550.1 63.314 169 52 5 272 434 152 316 5.46e-61 202
Msa0433430 AT4G31550.1 39.024 205 83 6 1 179 1 189 3.79e-29 117
Msa0433430 AT2G24570.1 57.485 167 58 6 278 436 154 315 5.16e-52 178
Msa0433430 AT2G24570.1 37.295 244 119 11 1 219 1 235 1.52e-22 98.2
Msa0433430 AT4G24240.1 51.282 156 59 5 267 417 195 338 1.76e-41 151
Msa0433430 AT4G31550.3 64.912 114 35 3 272 380 152 265 1.92e-37 138
Msa0433430 AT4G31550.3 39.024 205 83 6 1 179 1 189 1.92e-29 116
Msa0433430 AT2G23320.1 54.386 114 47 3 308 417 185 297 7.29e-37 137
Msa0433430 AT2G30590.1 58.879 107 41 2 321 424 271 377 7.63e-37 139
Msa0433430 AT3G04670.1 45.238 168 74 5 254 420 172 322 1.03e-35 135
Msa0433430 AT5G28650.1 44.253 174 81 6 248 420 164 322 4.18e-35 133
Msa0433430 AT4G24240.2 49.580 119 43 5 267 380 195 301 2.20e-23 100
Msa0433430 AT3G58710.2 49.462 93 31 2 336 417 40 127 3.79e-23 99.0
Msa0433430 AT2G34830.1 50.575 87 38 2 336 417 186 272 4.33e-23 101
Msa0433430 AT2G34830.2 50.575 87 38 2 336 417 195 281 5.04e-23 101
Msa0433430 AT1G29280.1 61.017 59 23 0 359 417 73 131 8.01e-23 97.8
Msa0433430 AT4G01250.1 44.898 98 49 1 320 417 93 185 1.20e-22 98.2
Msa0433430 AT1G30650.1 46.392 97 47 2 326 417 178 274 1.69e-22 99.8
Msa0433430 AT3G58710.1 48.387 93 32 2 336 417 41 128 2.03e-22 97.1
Msa0433430 AT5G52830.1 51.220 82 36 2 336 417 145 222 8.43e-21 93.6
Msa0433430 AT5G45050.1 33.503 197 110 8 225 417 1058 1237 1.28e-20 95.9
Msa0433430 AT5G45050.4 33.503 197 110 8 225 417 919 1098 1.35e-20 95.5
Msa0433430 AT5G45050.2 33.503 197 110 8 225 417 1030 1209 1.36e-20 95.9
Msa0433430 AT3G04670.2 43.182 132 57 5 254 384 172 286 2.04e-19 88.6
Msa0433430 AT2G23320.2 53.247 77 31 3 308 380 185 260 1.12e-18 85.9
Msa0433430 AT4G39410.1 46.988 83 40 2 338 417 198 279 4.21e-18 85.1
Msa0433430 AT1G29860.1 41.176 102 57 2 318 417 92 192 4.81e-18 84.7
Msa0433430 AT1G69310.4 45.349 86 45 2 336 420 122 206 9.33e-18 84.0
Msa0433430 AT1G69310.2 45.349 86 45 2 336 420 122 206 9.33e-18 84.0
Msa0433430 AT1G69310.1 45.349 86 45 2 336 420 122 206 9.33e-18 84.0
Msa0433430 AT4G18170.1 41.053 95 50 2 323 417 140 228 1.73e-17 83.6
Msa0433430 AT2G47260.1 40.217 92 54 1 326 417 140 230 2.04e-17 83.6
Msa0433430 AT4G04450.2 42.553 94 54 0 324 417 162 255 2.18e-17 84.3
Msa0433430 AT5G07100.1 37.143 105 64 2 315 418 188 291 3.78e-17 82.4
Msa0433430 AT5G26170.1 41.333 75 43 1 347 421 100 173 4.51e-17 79.3
Msa0433430 AT4G04450.1 42.553 94 54 0 324 417 256 349 6.17e-17 83.6
Msa0433430 AT4G23550.1 51.613 62 30 0 357 418 137 198 8.25e-17 81.3
Msa0433430 AT5G07100.2 37.143 105 64 2 315 418 95 198 1.14e-16 79.3
Msa0433430 AT5G07100.4 37.143 105 64 2 315 418 95 198 1.14e-16 79.3
Msa0433430 AT5G07100.5 37.143 105 64 2 315 418 95 198 1.14e-16 79.3
Msa0433430 AT5G07100.3 37.143 105 64 2 315 418 95 198 1.14e-16 79.3
Msa0433430 AT2G44745.1 44.048 84 43 3 337 417 119 201 1.25e-16 79.0
Msa0433430 AT1G62300.1 47.297 74 39 0 344 417 296 369 1.40e-16 82.4
Msa0433430 AT4G22070.4 47.297 74 39 0 344 417 281 354 1.79e-16 82.0
Msa0433430 AT4G22070.3 47.297 74 39 0 344 417 281 354 1.79e-16 82.0
Msa0433430 AT4G22070.2 47.297 74 39 0 344 417 281 354 1.79e-16 82.0
Msa0433430 AT4G22070.1 47.297 74 39 0 344 417 281 354 1.79e-16 82.0
Msa0433430 AT5G49520.1 45.946 74 39 1 344 417 205 277 1.89e-16 81.3
Msa0433430 AT4G31800.2 37.615 109 64 2 346 452 97 203 2.57e-16 79.0
Msa0433430 AT2G37260.2 45.882 85 43 2 338 420 243 326 2.84e-16 80.5
Msa0433430 AT2G37260.3 45.882 85 43 2 338 420 245 328 2.90e-16 80.5
Msa0433430 AT2G37260.1 53.846 65 29 1 356 420 345 408 3.46e-16 80.9
Msa0433430 AT5G46350.1 46.479 71 37 1 347 417 170 239 3.65e-16 79.7
Msa0433430 AT5G15130.2 43.434 99 42 4 321 417 156 242 4.88e-16 80.9
Msa0433430 AT5G15130.1 43.434 99 42 4 321 417 198 284 5.78e-16 80.5
Msa0433430 AT4G31800.1 37.615 109 64 2 346 452 162 268 6.52e-16 79.0
Msa0433430 AT4G26640.5 47.297 74 38 1 344 417 189 261 1.59e-15 78.6
Msa0433430 AT4G26640.6 47.297 74 38 1 344 417 189 261 1.59e-15 78.6
Msa0433430 AT4G26640.4 47.297 74 38 1 344 417 189 261 1.59e-15 78.6
Msa0433430 AT4G26640.3 47.297 74 38 1 344 417 189 261 1.59e-15 78.6
Msa0433430 AT4G26640.1 47.297 74 38 1 344 417 293 365 1.88e-15 79.0
Msa0433430 AT4G26640.7 47.297 74 38 1 344 417 325 397 1.94e-15 79.0
Msa0433430 AT4G26640.2 47.297 74 38 1 344 417 365 437 2.00e-15 79.0
Msa0433430 AT4G01720.1 47.297 74 39 0 344 417 223 296 3.25e-15 78.2
Msa0433430 AT2G04880.2 46.479 71 37 1 347 417 270 339 3.37e-15 77.8
Msa0433430 AT2G04880.1 46.479 71 37 1 347 417 294 363 3.57e-15 78.2
Msa0433430 AT1G64000.1 49.180 61 30 1 357 417 111 170 5.63e-15 73.9
Msa0433430 AT2G38470.1 45.946 74 39 1 344 417 346 418 5.78e-15 77.4
Msa0433430 AT5G41570.1 41.250 80 46 1 338 417 76 154 6.19e-15 73.2
Msa0433430 AT2G03340.1 46.479 71 37 1 347 417 402 471 6.88e-15 77.0
Msa0433430 AT2G03340.1 46.032 63 31 3 356 417 245 305 7.87e-11 64.7
Msa0433430 AT2G40740.1 37.190 121 62 5 299 415 120 230 7.22e-15 75.5
Msa0433430 AT3G01080.2 51.613 62 29 1 356 417 340 400 8.43e-15 76.6
Msa0433430 AT3G01080.2 43.529 85 45 3 357 440 201 283 1.01e-13 73.6
Msa0433430 AT2G40740.3 37.190 121 62 5 299 415 129 239 9.74e-15 75.1
Msa0433430 AT1G66550.2 38.281 128 66 4 290 415 44 160 1.02e-14 74.3
Msa0433430 AT1G13960.1 46.479 71 37 1 347 417 396 465 1.13e-14 76.6
Msa0433430 AT3G01080.1 51.613 62 29 1 356 417 302 362 1.32e-14 75.9
Msa0433430 AT3G01080.1 43.529 85 45 3 357 440 163 245 1.49e-13 72.8
Msa0433430 AT1G13960.2 46.479 71 37 1 347 417 243 312 2.20e-14 74.7
Msa0433430 AT5G56270.1 45.455 77 41 1 341 417 468 543 3.01e-14 75.5
Msa0433430 AT3G01080.3 43.529 85 45 3 357 440 201 283 3.19e-14 73.9
Msa0433430 AT1G68150.1 45.333 75 37 1 343 417 222 292 3.92e-14 74.3
Msa0433430 AT4G26440.1 41.237 97 51 2 341 437 353 443 4.53e-14 74.7
Msa0433430 AT4G26440.1 46.667 60 29 3 359 417 176 233 8.76e-11 64.3
Msa0433430 AT1G18860.1 54.717 53 24 0 365 417 244 296 4.61e-14 74.7
Msa0433430 AT3G62340.1 42.500 80 45 1 338 417 96 174 4.66e-14 72.8
Msa0433430 AT4G30935.1 51.667 60 28 1 358 417 329 387 5.17e-14 74.3
Msa0433430 AT2G25000.2 47.368 57 30 0 361 417 104 160 6.76e-14 71.2
Msa0433430 AT2G25000.4 47.368 57 30 0 361 417 104 160 6.76e-14 71.2
Msa0433430 AT2G25000.3 47.368 57 30 0 361 417 126 182 1.19e-13 71.2
Msa0433430 AT2G25000.1 47.368 57 30 0 361 417 147 203 1.96e-13 70.9
Msa0433430 AT1G66550.1 38.043 92 47 2 334 415 74 165 3.46e-13 69.7
Msa0433430 AT5G64810.1 39.474 76 45 1 347 422 97 171 3.56e-13 68.6
Msa0433430 AT1G69310.3 41.860 86 44 3 336 420 122 202 4.34e-13 70.1
Msa0433430 AT1G80840.1 41.667 60 35 0 358 417 144 203 6.54e-13 69.7
Msa0433430 AT5G45260.1 32.692 156 89 7 274 417 1116 1267 8.25e-13 71.2
Msa0433430 AT1G66560.1 35.772 123 68 3 295 415 47 160 1.78e-12 67.8
Msa0433430 AT5G43290.1 42.857 77 40 2 342 418 99 171 2.81e-12 67.4
Msa0433430 AT2G46130.1 45.161 62 33 1 356 417 26 86 4.39e-12 63.2
Msa0433430 AT2G46400.1 35.780 109 63 3 307 411 52 157 4.77e-12 67.0
Msa0433430 AT1G80590.1 44.304 79 37 2 361 437 86 159 5.41e-12 65.9
Msa0433430 AT1G55600.1 38.961 77 46 1 341 417 288 363 6.51e-12 67.8
Msa0433430 AT2G21900.1 45.614 57 30 1 361 417 110 165 8.50e-12 64.7
Msa0433430 AT1G69810.2 36.364 99 53 5 344 439 129 220 1.05e-11 66.2
Msa0433430 AT1G69810.1 36.364 99 53 5 344 439 187 278 1.19e-11 66.6
Msa0433430 AT2G30250.1 41.096 73 40 2 345 417 315 384 3.19e-11 65.5
Msa0433430 AT5G13080.1 31.897 116 73 3 307 417 9 123 6.05e-11 60.8
Msa0433430 AT3G01970.1 44.262 61 33 1 357 417 62 121 9.19e-11 60.5

Find 166 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCTAGATCTAAGGATTT+AGG 0.160577 3_2:+85917617 None:intergenic
GGATTTAGGGTTAGATTTAA+AGG 0.234283 3_2:+85917631 None:intergenic
AGGGAGTGGGAGCATGGATT+TGG 0.234912 3_2:-85916296 Msa0433430:CDS
GGGAGTGGGAGCATGGATTT+GGG 0.237711 3_2:-85916295 Msa0433430:CDS
TACGTTACAACTAGTATATT+TGG 0.242016 3_2:+85916391 None:intergenic
CTTGGGGATTTCTAGATCTA+AGG 0.245293 3_2:+85917610 None:intergenic
GAAAATGACTTTGAGATTGA+TGG 0.268812 3_2:-85918002 None:intergenic
AATAATTCTGGTTCAGGTTC+AGG 0.270724 3_2:-85916316 Msa0433430:CDS
GTATGGTTCCAAACCGATTA+AGG 0.275343 3_2:-85916598 Msa0433430:CDS
TTTATTTCAGGGGTTATTAT+AGG 0.286785 3_2:-85916471 Msa0433430:intron
TTTCTAGATCTAAGGATTTA+GGG 0.294531 3_2:+85917618 None:intergenic
AAAGGTTGGTTATGGCTCTT+AGG 0.300408 3_2:+85917680 None:intergenic
GGATGTGGTGTTCCCTTAAT+CGG 0.308127 3_2:+85916585 None:intergenic
TTAGTAAAATCGAGAGTTAA+AGG 0.311607 3_2:+85917662 None:intergenic
CAGAATTATTCTCTTGCATT+GGG 0.323224 3_2:+85916329 None:intergenic
CAAGAGAATAATTCTGGTTC+AGG 0.324630 3_2:-85916322 Msa0433430:CDS
AATCACTCCGGCGATGTCTC+TGG 0.334104 3_2:-85917047 Msa0433430:CDS
GTTTGTGGCAGCGGTTGATC+AGG 0.340156 3_2:+85917764 None:intergenic
GGAAGCGAGCGTGGCCTTTA+CGG 0.340610 3_2:+85917807 None:intergenic
GCCGGTGTAATGGCCGGTGA+TGG 0.353361 3_2:+85917295 None:intergenic
GTGGGGATGGTGGATGGCAT+TGG 0.362477 3_2:+85917377 None:intergenic
ACCCTCACCCCTGCTGTCTC+TGG 0.371044 3_2:-85917116 Msa0433430:CDS
GGAAAACTAAATGTTTCCTT+GGG 0.371745 3_2:+85917593 None:intergenic
CCAATGCAAGAGAATAATTC+TGG 0.372712 3_2:-85916328 Msa0433430:CDS
CTGAGTAGAGGTGGAGGGAG+TGG 0.376016 3_2:+85917739 None:intergenic
TGGAAAACTAAATGTTTCCT+TGG 0.386222 3_2:+85917592 None:intergenic
GGTTGATCAGGGGTTGCATT+TGG 0.390158 3_2:+85917776 None:intergenic
CCGGTGTAATGGCCGGTGAT+GGG 0.391889 3_2:+85917296 None:intergenic
GAGTATTCATGGAGGAAGTA+TGG 0.396538 3_2:-85916615 Msa0433430:CDS
CGAGAGTTAAAGGTTGGTTA+TGG 0.401114 3_2:+85917672 None:intergenic
TGAAGTGGTGGTGGTGGAGG+TGG 0.402228 3_2:+85917716 None:intergenic
TGGTGTTCCCTTAATCGGTT+TGG 0.407293 3_2:+85916590 None:intergenic
AAAATTGTCCAGCTAGGAAA+AGG 0.409042 3_2:-85916435 Msa0433430:CDS
CCAGAATTATTCTCTTGCAT+TGG 0.415510 3_2:+85916328 None:intergenic
GGGTTAGATTTAAAGGTGTA+AGG 0.415786 3_2:+85917638 None:intergenic
TGTTTACCACAGGAGATAGA+AGG 0.417341 3_2:+85917224 None:intergenic
ATTTGAAGTGGTGGTGGTGG+AGG 0.418020 3_2:+85917713 None:intergenic
GGGGTGTTTGAGCTAACCTT+AGG 0.419189 3_2:-85916274 Msa0433430:CDS
GGAGTGGGAGCATGGATTTG+GGG 0.422889 3_2:-85916294 Msa0433430:CDS
CGGTGTAATGGCCGGTGATG+GGG 0.429599 3_2:+85917297 None:intergenic
TGGAGGTGGCTGAGTAGAGG+TGG 0.430349 3_2:+85917730 None:intergenic
TACCAGCAGATGAGTATTCA+TGG 0.434617 3_2:-85916626 Msa0433430:CDS
GTGGAGGGAGTGGAAGTTTG+TGG 0.440856 3_2:+85917749 None:intergenic
CACTGGCTTCGCCGGTGTAA+TGG 0.443886 3_2:+85917285 None:intergenic
AACACTGCCGTCGCCGGTGA+TGG 0.454613 3_2:+85917553 None:intergenic
TAAAATCGAGAGTTAAAGGT+TGG 0.454643 3_2:+85917666 None:intergenic
AGAGACATTATTAGCGAAGT+TGG 0.457022 3_2:+85917907 None:intergenic
AGGTGGCTGAGTAGAGGTGG+AGG 0.473021 3_2:+85917733 None:intergenic
GAGTGGGAGCATGGATTTGG+GGG 0.475482 3_2:-85916293 Msa0433430:CDS
AAAGATGAGTAAGATGTAAG+AGG 0.475709 3_2:+85917200 None:intergenic
CTCCATGAATACTCATCTGC+TGG 0.476195 3_2:+85916624 None:intergenic
AGAAATGCCACTGCCAGAAA+AGG 0.476227 3_2:-85917007 Msa0433430:intron
TATGGTTCCAAACCGATTAA+GGG 0.476894 3_2:-85916597 Msa0433430:CDS
CTTGTTCTAATTCCCTCCTA+AGG 0.478049 3_2:+85916258 None:intergenic
ATCACTCCGGCGATGTCTCT+GGG 0.478282 3_2:-85917046 Msa0433430:CDS
TGTTTACCACGGGAGACAGC+GGG 0.481273 3_2:+85917353 None:intergenic
AACGCTTCTATCGCCGGTGA+TGG 0.481498 3_2:+85917166 None:intergenic
CAGGGGTTGCATTTGGATTG+CGG 0.482525 3_2:+85917783 None:intergenic
GAGTCCCGTGCATAAGTTCA+AGG 0.483185 3_2:-85916659 Msa0433430:CDS
TTCAATGACGGCGATAAAAG+AGG 0.485298 3_2:+85917083 None:intergenic
ATAATTCTGGTTCAGGTTCA+GGG 0.485370 3_2:-85916315 Msa0433430:CDS
CGCCGGTGATGGCGGAGGAT+AGG 0.488781 3_2:+85917564 None:intergenic
TTGGGGCTTGATTATGAAGC+TGG 0.489027 3_2:+85916347 None:intergenic
GAGATAGAAGGGGTGAGGAG+TGG 0.490991 3_2:+85917236 None:intergenic
GGTGTAATGGCCGGTGATGG+GGG 0.493480 3_2:+85917298 None:intergenic
GGTTTACCGCTGGAGACAGC+AGG 0.494929 3_2:+85917494 None:intergenic
AGTGTTTCCAATGGCAGACT+TGG 0.497101 3_2:-85917536 Msa0433430:CDS
TGGTGGAGGTGGCTGAGTAG+AGG 0.497676 3_2:+85917727 None:intergenic
CTGGTTCAGGTTCAGGGAGT+GGG 0.498298 3_2:-85916309 Msa0433430:CDS
GCCTTTACGGTGGAGTAAGT+TGG 0.499407 3_2:+85917820 None:intergenic
AGTGTCTCCAATGGCAGGCT+AGG 0.503100 3_2:-85917407 Msa0433430:CDS
AGATGGACCAAGTCTGCCAT+TGG 0.504301 3_2:+85917529 None:intergenic
ATGGTGGATGGCATTGGACA+TGG 0.505543 3_2:+85917383 None:intergenic
ATTGGAAACACTGGCTTCGC+CGG 0.506348 3_2:+85917277 None:intergenic
AGCTAGGAAAAGGGTGGAGA+AGG 0.508533 3_2:-85916425 Msa0433430:CDS
TGAATTTGAAGTGGTGGTGG+TGG 0.508665 3_2:+85917710 None:intergenic
TCTGGTTCAGGTTCAGGGAG+TGG 0.509914 3_2:-85916310 Msa0433430:CDS
GTGTTTGAGCTAACCTTAGG+AGG 0.513166 3_2:-85916271 Msa0433430:CDS
GATGACATGAATGATGAGTT+AGG 0.513463 3_2:+85917461 None:intergenic
ATAGAAGCGTTTCCAGCGGC+AGG 0.515749 3_2:-85917154 Msa0433430:CDS
GGCTTCGCCGGTGTAATGGC+CGG 0.516112 3_2:+85917289 None:intergenic
TTTGTGGCAGCGGTTGATCA+GGG 0.520203 3_2:+85917765 None:intergenic
ACATGGACCTAGCCTGCCAT+TGG 0.522173 3_2:+85917400 None:intergenic
AGGTTCAGGGAGTGGGAGCA+TGG 0.522327 3_2:-85916302 Msa0433430:CDS
AGATGGACCGATCCTGCCGC+TGG 0.527015 3_2:+85917142 None:intergenic
AGTGTTTCCAATGGCAGACT+AGG 0.528173 3_2:-85917266 Msa0433430:CDS
CACCAGAGACAGCAGGGGTG+AGG 0.529492 3_2:+85917114 None:intergenic
GCCGTCGCCGGTGATGGCGG+AGG 0.529845 3_2:+85917559 None:intergenic
GGAGTGGAAGTTTGTGGCAG+CGG 0.530182 3_2:+85917755 None:intergenic
TTCATGTCCTCCGCCATCAC+CGG 0.530650 3_2:-85917179 Msa0433430:CDS
ATTGGAAACACTGCCGTCGC+CGG 0.530836 3_2:+85917547 None:intergenic
ACGGCAGTGTCTCCAATGGC+AGG 0.531858 3_2:-85917412 Msa0433430:CDS
GAAGGGGTGAGGAGTGGAGA+TGG 0.533512 3_2:+85917242 None:intergenic
GCTGGAAACGCTTCTATCGC+CGG 0.535199 3_2:+85917160 None:intergenic
ATCATCAGTCACCTTGGATG+TGG 0.536621 3_2:+85916570 None:intergenic
AGCGTTTCCAGCGGCAGGAT+CGG 0.536745 3_2:-85917149 Msa0433430:CDS
CTCCTATCCTCCGCCATCAC+CGG 0.540008 3_2:-85917566 Msa0433430:CDS
ATGGCGGAGGATAGGAGTGA+TGG 0.540988 3_2:+85917572 None:intergenic
ACCAGAGACAGCAGGGGTGA+GGG 0.543631 3_2:+85917115 None:intergenic
TGAAAGAGGTGGTTTACCGC+TGG 0.544509 3_2:+85917484 None:intergenic
CCCATCACCGGCCATTACAC+CGG 0.545382 3_2:-85917296 Msa0433430:CDS
TCTATCGCCGGTGATGGCGG+AGG 0.548144 3_2:+85917172 None:intergenic
ATTGGAGACACTGCCGTCGC+CGG 0.548673 3_2:+85917418 None:intergenic
AGATGGTCCTAGTCTGCCAT+TGG 0.550295 3_2:+85917259 None:intergenic
GGTGGCTGAGTAGAGGTGGA+GGG 0.555049 3_2:+85917734 None:intergenic
CACAGGAGATAGAAGGGGTG+AGG 0.558130 3_2:+85917231 None:intergenic
AATGATGAGTTAGGTGAAAG+AGG 0.558263 3_2:+85917470 None:intergenic
GATTGCGGCGGAAGCGAGCG+TGG 0.558913 3_2:+85917798 None:intergenic
GGAGGAATTTGAATTTGAAG+TGG 0.561033 3_2:+85917701 None:intergenic
ACTGCCGTCGCCGGTGATGG+CGG 0.561235 3_2:+85917556 None:intergenic
GTTTACCGCTGGAGACAGCA+GGG 0.565068 3_2:+85917495 None:intergenic
GGTTTACCACCAGAGACAGC+AGG 0.565359 3_2:+85917107 None:intergenic
GGAATTTGAATTTGAAGTGG+TGG 0.567821 3_2:+85917704 None:intergenic
TCCTCCGCCATCACCGGCGA+CGG 0.570163 3_2:-85917560 Msa0433430:CDS
ATTTGAATTTGAAGTGGTGG+TGG 0.570309 3_2:+85917707 None:intergenic
GCTTCTATCGCCGGTGATGG+CGG 0.573163 3_2:+85917169 None:intergenic
TAGTCTGCCATTGGAAACAC+TGG 0.574513 3_2:+85917268 None:intergenic
GCCGGTGATATCGCGAGCAA+AGG 0.576295 3_2:+85917436 None:intergenic
GGTTGGTTATGGCTCTTAGG+AGG 0.578662 3_2:+85917683 None:intergenic
AAATTGTCCAGCTAGGAAAA+GGG 0.578813 3_2:-85916434 Msa0433430:CDS
CTGTTTACCACGGGAGACAG+CGG 0.579258 3_2:+85917352 None:intergenic
GTTTACCACAGGAGATAGAA+GGG 0.580348 3_2:+85917225 None:intergenic
TCCAACTTACTCCACCGTAA+AGG 0.584686 3_2:-85917821 Msa0433430:CDS
TGTAAGAGGCTGTTTACCAC+AGG 0.588372 3_2:+85917214 None:intergenic
GTAAGTTGGATAGTTTCTTG+AGG 0.588388 3_2:+85917834 None:intergenic
AGCGAGCGTGGCCTTTACGG+TGG 0.596751 3_2:+85917810 None:intergenic
TTGTGGCAGCGGTTGATCAG+GGG 0.597446 3_2:+85917766 None:intergenic
CTCACCCCTGCTGTCTCTGG+TGG 0.599307 3_2:-85917113 Msa0433430:CDS
GCAGGGGTGAGGGTATAAGA+TGG 0.600551 3_2:+85917125 None:intergenic
CAATCCTTGAACTTATGCAC+GGG 0.601760 3_2:+85916655 None:intergenic
GCCTTTGCTCGCGATATCAC+CGG 0.603472 3_2:-85917437 Msa0433430:CDS
AATGGTGAGATAGAAGAAAG+AGG 0.604400 3_2:+85917329 None:intergenic
GAGGTCTGAAACAGTGATGT+TGG 0.604494 3_2:+85917853 None:intergenic
GCAGTGGCATTTCTTAGATG+CGG 0.605629 3_2:+85917016 None:intergenic
AGAAAGAGGCTGTTTACCAC+GGG 0.608993 3_2:+85917343 None:intergenic
CTCACCCCTGCTGTCTCCAG+CGG 0.609509 3_2:-85917500 Msa0433430:CDS
GCAGGGGTGAGAATTTGAGA+TGG 0.611517 3_2:+85917512 None:intergenic
GGCGAAGCCAGTGTTTCCAA+TGG 0.611891 3_2:-85917275 Msa0433430:CDS
TTTACCACGGGAGACAGCGG+GGG 0.612657 3_2:+85917355 None:intergenic
GCTCGCGATATCACCGGCGA+CGG 0.612885 3_2:-85917431 Msa0433430:CDS
CTCACCCCTTCTATCTCCTG+TGG 0.614517 3_2:-85917230 Msa0433430:CDS
GTGGCATTTCTTAGATGCGG+AGG 0.615532 3_2:+85917019 None:intergenic
GTTTACCACCAGAGACAGCA+GGG 0.616141 3_2:+85917108 None:intergenic
GGCGACGGCAGTGTCTCCAA+TGG 0.618204 3_2:-85917416 Msa0433430:CDS
AGAATTATTCTCTTGCATTG+GGG 0.619176 3_2:+85916330 None:intergenic
GTTTACCACGGGAGACAGCG+GGG 0.620522 3_2:+85917354 None:intergenic
GAAAACTAAATGTTTCCTTG+GGG 0.621149 3_2:+85917594 None:intergenic
GCAATCCTTGAACTTATGCA+CGG 0.621816 3_2:+85916654 None:intergenic
AAGAAAGAGGCTGTTTACCA+CGG 0.623906 3_2:+85917342 None:intergenic
TTAAGGGAACACCACATCCA+AGG 0.631610 3_2:-85916581 Msa0433430:intron
TGTTTGAGCTAACCTTAGGA+GGG 0.631673 3_2:-85916270 Msa0433430:CDS
ATATTAGAAACTGCCACACA+AGG 0.641699 3_2:-85917944 Msa0433430:CDS
GGCGACGGCAGTGTTTCCAA+TGG 0.643275 3_2:-85917545 Msa0433430:CDS
GATGAGTTAGGTGAAAGAGG+TGG 0.645788 3_2:+85917473 None:intergenic
AAAAGCTGTCACAATCACTC+CGG 0.649448 3_2:-85917059 Msa0433430:CDS
TTGTCCAGCTAGGAAAAGGG+TGG 0.652692 3_2:-85916431 Msa0433430:CDS
GGCGATAGAAGCGTTTCCAG+CGG 0.654727 3_2:-85917158 Msa0433430:CDS
AAGTGAGTTTAAGCCTTGTG+TGG 0.663342 3_2:+85917931 None:intergenic
CTTAGATCTAGAAATCCCCA+AGG 0.682048 3_2:-85917609 Msa0433430:CDS
GGGTTGCATTTGGATTGCGG+CGG 0.683767 3_2:+85917786 None:intergenic
GGGCTTGATTATGAAGCTGG+TGG 0.693764 3_2:+85916350 None:intergenic
AATGACGGCGATAAAAGAGG+CGG 0.703282 3_2:+85917086 None:intergenic
TTTACCACAGGAGATAGAAG+GGG 0.709642 3_2:+85917226 None:intergenic
TTTACCGCTGGAGACAGCAG+GGG 0.716826 3_2:+85917496 None:intergenic
TTTACCACCAGAGACAGCAG+GGG 0.764702 3_2:+85917109 None:intergenic
CAGCAGATGAGTATTCATGG+AGG 0.765821 3_2:-85916623 Msa0433430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTTTTTTTTTTTTTGA+AGG - chr3_2:85917359-85917378 Msa0433430:CDS 10.0%
!!! GTTTTGATTTTATTTTTTTT+AGG - chr3_2:85917555-85917574 Msa0433430:CDS 10.0%
!!! TTATTTTTTTTAGGAAAAAT+CGG - chr3_2:85917564-85917583 Msa0433430:CDS 10.0%
!!! TTTGTTTTTTTTTTTTTTGA+AGG - chr3_2:85917359-85917378 Msa0433430:CDS 10.0%
!!! GTTTTGATTTTATTTTTTTT+AGG - chr3_2:85917555-85917574 Msa0433430:CDS 10.0%
!!! TTATTTTTTTTAGGAAAAAT+CGG - chr3_2:85917564-85917583 Msa0433430:CDS 10.0%
!!! TAAATTAATTTTACCTTTTC+TGG + chr3_2:85917271-85917290 None:intergenic 15.0%
!! TAAATGACAAATAAAATATG+CGG + chr3_2:85917463-85917482 None:intergenic 15.0%
!! ATTTATTTGAATATGGTAAA+AGG - chr3_2:85917731-85917750 Msa0433430:CDS 15.0%
!!! TAAATTAATTTTACCTTTTC+TGG + chr3_2:85917271-85917290 None:intergenic 15.0%
!! TAAATGACAAATAAAATATG+CGG + chr3_2:85917463-85917482 None:intergenic 15.0%
!! ATTTATTTGAATATGGTAAA+AGG - chr3_2:85917731-85917750 Msa0433430:CDS 15.0%
!! AAATGACAAATAAAATATGC+GGG + chr3_2:85917462-85917481 None:intergenic 20.0%
!! ACCATATTCAAATAAATCAA+CGG + chr3_2:85917728-85917747 None:intergenic 20.0%
!!! TGTTTTGTTTTGTTTATTTC+AGG - chr3_2:85917779-85917798 Msa0433430:CDS 20.0%
!!! GTTTTGTTTTGTTTATTTCA+GGG - chr3_2:85917780-85917799 Msa0433430:CDS 20.0%
!!! TTTTGTTTTGTTTATTTCAG+GGG - chr3_2:85917781-85917800 Msa0433430:CDS 20.0%
!! AAATGACAAATAAAATATGC+GGG + chr3_2:85917462-85917481 None:intergenic 20.0%
!! ACCATATTCAAATAAATCAA+CGG + chr3_2:85917728-85917747 None:intergenic 20.0%
!!! TGTTTTGTTTTGTTTATTTC+AGG - chr3_2:85917779-85917798 Msa0433430:CDS 20.0%
!!! GTTTTGTTTTGTTTATTTCA+GGG - chr3_2:85917780-85917799 Msa0433430:CDS 20.0%
!!! TTTTGTTTTGTTTATTTCAG+GGG - chr3_2:85917781-85917800 Msa0433430:CDS 20.0%
! TTAGTAAAATCGAGAGTTAA+AGG + chr3_2:85916603-85916622 None:intergenic 25.0%
! TTTCTAGATCTAAGGATTTA+GGG + chr3_2:85916647-85916666 None:intergenic 25.0%
!! ATTTCTAGATCTAAGGATTT+AGG + chr3_2:85916648-85916667 None:intergenic 25.0%
! TGTTAATAGTCAACATTCAT+TGG - chr3_2:85917302-85917321 Msa0433430:CDS 25.0%
! AATGACAAATAAAATATGCG+GGG + chr3_2:85917461-85917480 None:intergenic 25.0%
! GGTAAAAGGAATGTTTAATA+AGG - chr3_2:85917745-85917764 Msa0433430:CDS 25.0%
! TTTATTTCAGGGGTTATTAT+AGG - chr3_2:85917791-85917810 Msa0433430:CDS 25.0%
! TACGTTACAACTAGTATATT+TGG + chr3_2:85917874-85917893 None:intergenic 25.0%
! TTAGTAAAATCGAGAGTTAA+AGG + chr3_2:85916603-85916622 None:intergenic 25.0%
! TTTCTAGATCTAAGGATTTA+GGG + chr3_2:85916647-85916666 None:intergenic 25.0%
!! ATTTCTAGATCTAAGGATTT+AGG + chr3_2:85916648-85916667 None:intergenic 25.0%
! TGTTAATAGTCAACATTCAT+TGG - chr3_2:85917302-85917321 Msa0433430:CDS 25.0%
! AATGACAAATAAAATATGCG+GGG + chr3_2:85917461-85917480 None:intergenic 25.0%
! GGTAAAAGGAATGTTTAATA+AGG - chr3_2:85917745-85917764 Msa0433430:CDS 25.0%
! TTTATTTCAGGGGTTATTAT+AGG - chr3_2:85917791-85917810 Msa0433430:CDS 25.0%
! TACGTTACAACTAGTATATT+TGG + chr3_2:85917874-85917893 None:intergenic 25.0%
!!! ATTGATGGATTTTCCAAACA+TGG - chr3_2:85916275-85916294 Msa0433430:CDS 30.0%
TAAAATCGAGAGTTAAAGGT+TGG + chr3_2:85916599-85916618 None:intergenic 30.0%
! GGATTTAGGGTTAGATTTAA+AGG + chr3_2:85916634-85916653 None:intergenic 30.0%
GAAAACTAAATGTTTCCTTG+GGG + chr3_2:85916671-85916690 None:intergenic 30.0%
GGAAAACTAAATGTTTCCTT+GGG + chr3_2:85916672-85916691 None:intergenic 30.0%
TGGAAAACTAAATGTTTCCT+TGG + chr3_2:85916673-85916692 None:intergenic 30.0%
AAAGATGAGTAAGATGTAAG+AGG + chr3_2:85917065-85917084 None:intergenic 30.0%
!! TTTTTAGGAAAAATCGGAAC+AGG - chr3_2:85917570-85917589 Msa0433430:CDS 30.0%
!! GCCGTTGATTTATTTGAATA+TGG - chr3_2:85917724-85917743 Msa0433430:CDS 30.0%
AGAATTATTCTCTTGCATTG+GGG + chr3_2:85917935-85917954 None:intergenic 30.0%
CAGAATTATTCTCTTGCATT+GGG + chr3_2:85917936-85917955 None:intergenic 30.0%
!!! ATTGATGGATTTTCCAAACA+TGG - chr3_2:85916275-85916294 Msa0433430:CDS 30.0%
TAAAATCGAGAGTTAAAGGT+TGG + chr3_2:85916599-85916618 None:intergenic 30.0%
! GGATTTAGGGTTAGATTTAA+AGG + chr3_2:85916634-85916653 None:intergenic 30.0%
GAAAACTAAATGTTTCCTTG+GGG + chr3_2:85916671-85916690 None:intergenic 30.0%
GGAAAACTAAATGTTTCCTT+GGG + chr3_2:85916672-85916691 None:intergenic 30.0%
TGGAAAACTAAATGTTTCCT+TGG + chr3_2:85916673-85916692 None:intergenic 30.0%
AAAGATGAGTAAGATGTAAG+AGG + chr3_2:85917065-85917084 None:intergenic 30.0%
!! TTTTTAGGAAAAATCGGAAC+AGG - chr3_2:85917570-85917589 Msa0433430:CDS 30.0%
!! GCCGTTGATTTATTTGAATA+TGG - chr3_2:85917724-85917743 Msa0433430:CDS 30.0%
AGAATTATTCTCTTGCATTG+GGG + chr3_2:85917935-85917954 None:intergenic 30.0%
CAGAATTATTCTCTTGCATT+GGG + chr3_2:85917936-85917955 None:intergenic 30.0%
! TCTTTTTCCTCATCCATGTT+TGG + chr3_2:85916291-85916310 None:intergenic 35.0%
ATATTAGAAACTGCCACACA+AGG - chr3_2:85916318-85916337 Msa0433430:CDS 35.0%
AGAGACATTATTAGCGAAGT+TGG + chr3_2:85916358-85916377 None:intergenic 35.0%
! GTAAGTTGGATAGTTTCTTG+AGG + chr3_2:85916431-85916450 None:intergenic 35.0%
! ATTTGAATTTGAAGTGGTGG+TGG + chr3_2:85916558-85916577 None:intergenic 35.0%
! GGAATTTGAATTTGAAGTGG+TGG + chr3_2:85916561-85916580 None:intergenic 35.0%
GGAGGAATTTGAATTTGAAG+TGG + chr3_2:85916564-85916583 None:intergenic 35.0%
! GGGTTAGATTTAAAGGTGTA+AGG + chr3_2:85916627-85916646 None:intergenic 35.0%
AATGATGAGTTAGGTGAAAG+AGG + chr3_2:85916795-85916814 None:intergenic 35.0%
GATGACATGAATGATGAGTT+AGG + chr3_2:85916804-85916823 None:intergenic 35.0%
AATGGTGAGATAGAAGAAAG+AGG + chr3_2:85916936-85916955 None:intergenic 35.0%
! TGACAGCTTTTCTTCAATGA+CGG + chr3_2:85917194-85917213 None:intergenic 35.0%
!! AATTTTACCTTTTCTGGCAG+TGG + chr3_2:85917265-85917284 None:intergenic 35.0%
TAGTCAACATTCATTGGTCA+CGG - chr3_2:85917308-85917327 Msa0433430:CDS 35.0%
CGTTTGTCGTAAAAAAGACA+AGG - chr3_2:85917407-85917426 Msa0433430:CDS 35.0%
TATGGTTCCAAACCGATTAA+GGG - chr3_2:85917665-85917684 Msa0433430:CDS 35.0%
AAATCAATCATCAGTCACCT+TGG + chr3_2:85917701-85917720 None:intergenic 35.0%
TGTCTAAAAATTGTCCAGCT+AGG - chr3_2:85917821-85917840 Msa0433430:CDS 35.0%
AAAATTGTCCAGCTAGGAAA+AGG - chr3_2:85917827-85917846 Msa0433430:CDS 35.0%
AAATTGTCCAGCTAGGAAAA+GGG - chr3_2:85917828-85917847 Msa0433430:CDS 35.0%
CCAGAATTATTCTCTTGCAT+TGG + chr3_2:85917937-85917956 None:intergenic 35.0%
CCAATGCAAGAGAATAATTC+TGG - chr3_2:85917934-85917953 Msa0433430:CDS 35.0%
!! CAAGAGAATAATTCTGGTTC+AGG - chr3_2:85917940-85917959 Msa0433430:CDS 35.0%
!! AATAATTCTGGTTCAGGTTC+AGG - chr3_2:85917946-85917965 Msa0433430:CDS 35.0%
!! ATAATTCTGGTTCAGGTTCA+GGG - chr3_2:85917947-85917966 Msa0433430:CDS 35.0%
! TCTTTTTCCTCATCCATGTT+TGG + chr3_2:85916291-85916310 None:intergenic 35.0%
ATATTAGAAACTGCCACACA+AGG - chr3_2:85916318-85916337 Msa0433430:CDS 35.0%
AGAGACATTATTAGCGAAGT+TGG + chr3_2:85916358-85916377 None:intergenic 35.0%
! GTAAGTTGGATAGTTTCTTG+AGG + chr3_2:85916431-85916450 None:intergenic 35.0%
! ATTTGAATTTGAAGTGGTGG+TGG + chr3_2:85916558-85916577 None:intergenic 35.0%
! GGAATTTGAATTTGAAGTGG+TGG + chr3_2:85916561-85916580 None:intergenic 35.0%
GGAGGAATTTGAATTTGAAG+TGG + chr3_2:85916564-85916583 None:intergenic 35.0%
! GGGTTAGATTTAAAGGTGTA+AGG + chr3_2:85916627-85916646 None:intergenic 35.0%
AATGATGAGTTAGGTGAAAG+AGG + chr3_2:85916795-85916814 None:intergenic 35.0%
GATGACATGAATGATGAGTT+AGG + chr3_2:85916804-85916823 None:intergenic 35.0%
AATGGTGAGATAGAAGAAAG+AGG + chr3_2:85916936-85916955 None:intergenic 35.0%
! TGACAGCTTTTCTTCAATGA+CGG + chr3_2:85917194-85917213 None:intergenic 35.0%
!! AATTTTACCTTTTCTGGCAG+TGG + chr3_2:85917265-85917284 None:intergenic 35.0%
TAGTCAACATTCATTGGTCA+CGG - chr3_2:85917308-85917327 Msa0433430:CDS 35.0%
CGTTTGTCGTAAAAAAGACA+AGG - chr3_2:85917407-85917426 Msa0433430:CDS 35.0%
TATGGTTCCAAACCGATTAA+GGG - chr3_2:85917665-85917684 Msa0433430:CDS 35.0%
AAATCAATCATCAGTCACCT+TGG + chr3_2:85917701-85917720 None:intergenic 35.0%
TGTCTAAAAATTGTCCAGCT+AGG - chr3_2:85917821-85917840 Msa0433430:CDS 35.0%
AAAATTGTCCAGCTAGGAAA+AGG - chr3_2:85917827-85917846 Msa0433430:CDS 35.0%
AAATTGTCCAGCTAGGAAAA+GGG - chr3_2:85917828-85917847 Msa0433430:CDS 35.0%
CCAGAATTATTCTCTTGCAT+TGG + chr3_2:85917937-85917956 None:intergenic 35.0%
CCAATGCAAGAGAATAATTC+TGG - chr3_2:85917934-85917953 Msa0433430:CDS 35.0%
!! CAAGAGAATAATTCTGGTTC+AGG - chr3_2:85917940-85917959 Msa0433430:CDS 35.0%
!! AATAATTCTGGTTCAGGTTC+AGG - chr3_2:85917946-85917965 Msa0433430:CDS 35.0%
!! ATAATTCTGGTTCAGGTTCA+GGG - chr3_2:85917947-85917966 Msa0433430:CDS 35.0%
! GGATTTTCCAAACATGGATG+AGG - chr3_2:85916281-85916300 Msa0433430:CDS 40.0%
! AAGTGAGTTTAAGCCTTGTG+TGG + chr3_2:85916334-85916353 None:intergenic 40.0%
!!! AGTGTTTTGAAGAGAGGCTT+GGG + chr3_2:85916382-85916401 None:intergenic 40.0%
!!! GAGTTCAGTGTTTTGAAGAG+AGG + chr3_2:85916388-85916407 None:intergenic 40.0%
! AAAGGTTGGTTATGGCTCTT+AGG + chr3_2:85916585-85916604 None:intergenic 40.0%
! CGAGAGTTAAAGGTTGGTTA+TGG + chr3_2:85916593-85916612 None:intergenic 40.0%
! CTTGGGGATTTCTAGATCTA+AGG + chr3_2:85916655-85916674 None:intergenic 40.0%
CTTAGATCTAGAAATCCCCA+AGG - chr3_2:85916653-85916672 Msa0433430:CDS 40.0%
AAGAAAGAGGCTGTTTACCA+CGG + chr3_2:85916923-85916942 None:intergenic 40.0%
TTTACCACAGGAGATAGAAG+GGG + chr3_2:85917039-85917058 None:intergenic 40.0%
GTTTACCACAGGAGATAGAA+GGG + chr3_2:85917040-85917059 None:intergenic 40.0%
TGTTTACCACAGGAGATAGA+AGG + chr3_2:85917041-85917060 None:intergenic 40.0%
TTCAATGACGGCGATAAAAG+AGG + chr3_2:85917182-85917201 None:intergenic 40.0%
AAAAGCTGTCACAATCACTC+CGG - chr3_2:85917203-85917222 Msa0433430:CDS 40.0%
CAATCCTTGAACTTATGCAC+GGG + chr3_2:85917610-85917629 None:intergenic 40.0%
GCAATCCTTGAACTTATGCA+CGG + chr3_2:85917611-85917630 None:intergenic 40.0%
TACCAGCAGATGAGTATTCA+TGG - chr3_2:85917636-85917655 Msa0433430:CDS 40.0%
GAGTATTCATGGAGGAAGTA+TGG - chr3_2:85917647-85917666 Msa0433430:CDS 40.0%
GTATGGTTCCAAACCGATTA+AGG - chr3_2:85917664-85917683 Msa0433430:CDS 40.0%
TGTTTGAGCTAACCTTAGGA+GGG - chr3_2:85917992-85918011 Msa0433430:CDS 40.0%
! GGATTTTCCAAACATGGATG+AGG - chr3_2:85916281-85916300 Msa0433430:CDS 40.0%
! AAGTGAGTTTAAGCCTTGTG+TGG + chr3_2:85916334-85916353 None:intergenic 40.0%
!!! AGTGTTTTGAAGAGAGGCTT+GGG + chr3_2:85916382-85916401 None:intergenic 40.0%
!!! GAGTTCAGTGTTTTGAAGAG+AGG + chr3_2:85916388-85916407 None:intergenic 40.0%
! AAAGGTTGGTTATGGCTCTT+AGG + chr3_2:85916585-85916604 None:intergenic 40.0%
! CGAGAGTTAAAGGTTGGTTA+TGG + chr3_2:85916593-85916612 None:intergenic 40.0%
! CTTGGGGATTTCTAGATCTA+AGG + chr3_2:85916655-85916674 None:intergenic 40.0%
CTTAGATCTAGAAATCCCCA+AGG - chr3_2:85916653-85916672 Msa0433430:CDS 40.0%
AAGAAAGAGGCTGTTTACCA+CGG + chr3_2:85916923-85916942 None:intergenic 40.0%
TTTACCACAGGAGATAGAAG+GGG + chr3_2:85917039-85917058 None:intergenic 40.0%
GTTTACCACAGGAGATAGAA+GGG + chr3_2:85917040-85917059 None:intergenic 40.0%
TGTTTACCACAGGAGATAGA+AGG + chr3_2:85917041-85917060 None:intergenic 40.0%
TTCAATGACGGCGATAAAAG+AGG + chr3_2:85917182-85917201 None:intergenic 40.0%
AAAAGCTGTCACAATCACTC+CGG - chr3_2:85917203-85917222 Msa0433430:CDS 40.0%
CAATCCTTGAACTTATGCAC+GGG + chr3_2:85917610-85917629 None:intergenic 40.0%
GCAATCCTTGAACTTATGCA+CGG + chr3_2:85917611-85917630 None:intergenic 40.0%
TACCAGCAGATGAGTATTCA+TGG - chr3_2:85917636-85917655 Msa0433430:CDS 40.0%
GAGTATTCATGGAGGAAGTA+TGG - chr3_2:85917647-85917666 Msa0433430:CDS 40.0%
GTATGGTTCCAAACCGATTA+AGG - chr3_2:85917664-85917683 Msa0433430:CDS 40.0%
TGTTTGAGCTAACCTTAGGA+GGG - chr3_2:85917992-85918011 Msa0433430:CDS 40.0%
!!! GTGTTTTGAAGAGAGGCTTG+GGG + chr3_2:85916381-85916400 None:intergenic 45.0%
!!! CAGTGTTTTGAAGAGAGGCT+TGG + chr3_2:85916383-85916402 None:intergenic 45.0%
! GAGGTCTGAAACAGTGATGT+TGG + chr3_2:85916412-85916431 None:intergenic 45.0%
TCCAACTTACTCCACCGTAA+AGG - chr3_2:85916441-85916460 Msa0433430:CDS 45.0%
!! TGAATTTGAAGTGGTGGTGG+TGG + chr3_2:85916555-85916574 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+TGG - chr3_2:85916726-85916745 Msa0433430:intron 45.0%
GATGAGTTAGGTGAAAGAGG+TGG + chr3_2:85916792-85916811 None:intergenic 45.0%
AGAAAGAGGCTGTTTACCAC+GGG + chr3_2:85916922-85916941 None:intergenic 45.0%
TAGTCTGCCATTGGAAACAC+TGG + chr3_2:85916997-85917016 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+AGG - chr3_2:85916726-85916745 Msa0433430:intron 45.0%
TGTAAGAGGCTGTTTACCAC+AGG + chr3_2:85917051-85917070 None:intergenic 45.0%
AATGACGGCGATAAAAGAGG+CGG + chr3_2:85917179-85917198 None:intergenic 45.0%
GCAGTGGCATTTCTTAGATG+CGG + chr3_2:85917249-85917268 None:intergenic 45.0%
AGAAATGCCACTGCCAGAAA+AGG - chr3_2:85917255-85917274 Msa0433430:CDS 45.0%
CTCCATGAATACTCATCTGC+TGG + chr3_2:85917641-85917660 None:intergenic 45.0%
CAGCAGATGAGTATTCATGG+AGG - chr3_2:85917639-85917658 Msa0433430:CDS 45.0%
TGGTGTTCCCTTAATCGGTT+TGG + chr3_2:85917675-85917694 None:intergenic 45.0%
GGATGTGGTGTTCCCTTAAT+CGG + chr3_2:85917680-85917699 None:intergenic 45.0%
TTAAGGGAACACCACATCCA+AGG - chr3_2:85917681-85917700 Msa0433430:CDS 45.0%
ATCATCAGTCACCTTGGATG+TGG + chr3_2:85917695-85917714 None:intergenic 45.0%
TTGGGGCTTGATTATGAAGC+TGG + chr3_2:85917918-85917937 None:intergenic 45.0%
GTGTTTGAGCTAACCTTAGG+AGG - chr3_2:85917991-85918010 Msa0433430:CDS 45.0%
!!! GTGTTTTGAAGAGAGGCTTG+GGG + chr3_2:85916381-85916400 None:intergenic 45.0%
!!! CAGTGTTTTGAAGAGAGGCT+TGG + chr3_2:85916383-85916402 None:intergenic 45.0%
! GAGGTCTGAAACAGTGATGT+TGG + chr3_2:85916412-85916431 None:intergenic 45.0%
TCCAACTTACTCCACCGTAA+AGG - chr3_2:85916441-85916460 Msa0433430:CDS 45.0%
!! TGAATTTGAAGTGGTGGTGG+TGG + chr3_2:85916555-85916574 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+TGG - chr3_2:85916726-85916745 Msa0433430:intron 45.0%
GATGAGTTAGGTGAAAGAGG+TGG + chr3_2:85916792-85916811 None:intergenic 45.0%
AGAAAGAGGCTGTTTACCAC+GGG + chr3_2:85916922-85916941 None:intergenic 45.0%
TAGTCTGCCATTGGAAACAC+TGG + chr3_2:85916997-85917016 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+AGG - chr3_2:85916726-85916745 Msa0433430:intron 45.0%
TGTAAGAGGCTGTTTACCAC+AGG + chr3_2:85917051-85917070 None:intergenic 45.0%
AATGACGGCGATAAAAGAGG+CGG + chr3_2:85917179-85917198 None:intergenic 45.0%
GCAGTGGCATTTCTTAGATG+CGG + chr3_2:85917249-85917268 None:intergenic 45.0%
AGAAATGCCACTGCCAGAAA+AGG - chr3_2:85917255-85917274 Msa0433430:CDS 45.0%
CTCCATGAATACTCATCTGC+TGG + chr3_2:85917641-85917660 None:intergenic 45.0%
CAGCAGATGAGTATTCATGG+AGG - chr3_2:85917639-85917658 Msa0433430:CDS 45.0%
TGGTGTTCCCTTAATCGGTT+TGG + chr3_2:85917675-85917694 None:intergenic 45.0%
GGATGTGGTGTTCCCTTAAT+CGG + chr3_2:85917680-85917699 None:intergenic 45.0%
TTAAGGGAACACCACATCCA+AGG - chr3_2:85917681-85917700 Msa0433430:CDS 45.0%
ATCATCAGTCACCTTGGATG+TGG + chr3_2:85917695-85917714 None:intergenic 45.0%
TTGGGGCTTGATTATGAAGC+TGG + chr3_2:85917918-85917937 None:intergenic 45.0%
GTGTTTGAGCTAACCTTAGG+AGG - chr3_2:85917991-85918010 Msa0433430:CDS 45.0%
GCCTTTACGGTGGAGTAAGT+TGG + chr3_2:85916445-85916464 None:intergenic 50.0%
CAGGGGTTGCATTTGGATTG+CGG + chr3_2:85916482-85916501 None:intergenic 50.0%
GGTTGATCAGGGGTTGCATT+TGG + chr3_2:85916489-85916508 None:intergenic 50.0%
TTTGTGGCAGCGGTTGATCA+GGG + chr3_2:85916500-85916519 None:intergenic 50.0%
!! ATTTGAAGTGGTGGTGGTGG+AGG + chr3_2:85916552-85916571 None:intergenic 50.0%
! GGTTGGTTATGGCTCTTAGG+AGG + chr3_2:85916582-85916601 None:intergenic 50.0%
AGATGGACCAAGTCTGCCAT+TGG + chr3_2:85916736-85916755 None:intergenic 50.0%
GCAGGGGTGAGAATTTGAGA+TGG + chr3_2:85916753-85916772 None:intergenic 50.0%
TGAAAGAGGTGGTTTACCGC+TGG + chr3_2:85916781-85916800 None:intergenic 50.0%
!! ATGGTGGATGGCATTGGACA+TGG + chr3_2:85916882-85916901 None:intergenic 50.0%
!! ATTGGAAACACTGGCTTCGC+CGG + chr3_2:85916988-85917007 None:intergenic 50.0%
AGATGGTCCTAGTCTGCCAT+TGG + chr3_2:85917006-85917025 None:intergenic 50.0%
TTTACCACCAGAGACAGCAG+GGG + chr3_2:85917156-85917175 None:intergenic 50.0%
GTTTACCACCAGAGACAGCA+GGG + chr3_2:85917157-85917176 None:intergenic 50.0%
GTGGCATTTCTTAGATGCGG+AGG + chr3_2:85917246-85917265 None:intergenic 50.0%
GAGTCCCGTGCATAAGTTCA+AGG - chr3_2:85917603-85917622 Msa0433430:CDS 50.0%
TTGTCCAGCTAGGAAAAGGG+TGG - chr3_2:85917831-85917850 Msa0433430:CDS 50.0%
! TTCTCCACCCTTTTCCTAGC+TGG + chr3_2:85917838-85917857 None:intergenic 50.0%
AGCTAGGAAAAGGGTGGAGA+AGG - chr3_2:85917837-85917856 Msa0433430:CDS 50.0%
GGGCTTGATTATGAAGCTGG+TGG + chr3_2:85917915-85917934 None:intergenic 50.0%
! GGGGTGTTTGAGCTAACCTT+AGG - chr3_2:85917988-85918007 Msa0433430:CDS 50.0%
GCCTTTACGGTGGAGTAAGT+TGG + chr3_2:85916445-85916464 None:intergenic 50.0%
CAGGGGTTGCATTTGGATTG+CGG + chr3_2:85916482-85916501 None:intergenic 50.0%
GGTTGATCAGGGGTTGCATT+TGG + chr3_2:85916489-85916508 None:intergenic 50.0%
TTTGTGGCAGCGGTTGATCA+GGG + chr3_2:85916500-85916519 None:intergenic 50.0%
!! ATTTGAAGTGGTGGTGGTGG+AGG + chr3_2:85916552-85916571 None:intergenic 50.0%
! GGTTGGTTATGGCTCTTAGG+AGG + chr3_2:85916582-85916601 None:intergenic 50.0%
AGATGGACCAAGTCTGCCAT+TGG + chr3_2:85916736-85916755 None:intergenic 50.0%
GCAGGGGTGAGAATTTGAGA+TGG + chr3_2:85916753-85916772 None:intergenic 50.0%
TGAAAGAGGTGGTTTACCGC+TGG + chr3_2:85916781-85916800 None:intergenic 50.0%
!! ATGGTGGATGGCATTGGACA+TGG + chr3_2:85916882-85916901 None:intergenic 50.0%
!! ATTGGAAACACTGGCTTCGC+CGG + chr3_2:85916988-85917007 None:intergenic 50.0%
AGATGGTCCTAGTCTGCCAT+TGG + chr3_2:85917006-85917025 None:intergenic 50.0%
TTTACCACCAGAGACAGCAG+GGG + chr3_2:85917156-85917175 None:intergenic 50.0%
GTTTACCACCAGAGACAGCA+GGG + chr3_2:85917157-85917176 None:intergenic 50.0%
GTGGCATTTCTTAGATGCGG+AGG + chr3_2:85917246-85917265 None:intergenic 50.0%
GAGTCCCGTGCATAAGTTCA+AGG - chr3_2:85917603-85917622 Msa0433430:CDS 50.0%
TTGTCCAGCTAGGAAAAGGG+TGG - chr3_2:85917831-85917850 Msa0433430:CDS 50.0%
! TTCTCCACCCTTTTCCTAGC+TGG + chr3_2:85917838-85917857 None:intergenic 50.0%
AGCTAGGAAAAGGGTGGAGA+AGG - chr3_2:85917837-85917856 Msa0433430:CDS 50.0%
GGGCTTGATTATGAAGCTGG+TGG + chr3_2:85917915-85917934 None:intergenic 50.0%
! GGGGTGTTTGAGCTAACCTT+AGG - chr3_2:85917988-85918007 Msa0433430:CDS 50.0%
GGGTTGCATTTGGATTGCGG+CGG + chr3_2:85916479-85916498 None:intergenic 55.0%
TTGTGGCAGCGGTTGATCAG+GGG + chr3_2:85916499-85916518 None:intergenic 55.0%
GTTTGTGGCAGCGGTTGATC+AGG + chr3_2:85916501-85916520 None:intergenic 55.0%
GGAGTGGAAGTTTGTGGCAG+CGG + chr3_2:85916510-85916529 None:intergenic 55.0%
GTGGAGGGAGTGGAAGTTTG+TGG + chr3_2:85916516-85916535 None:intergenic 55.0%
! ATGGCGGAGGATAGGAGTGA+TGG + chr3_2:85916693-85916712 None:intergenic 55.0%
ATTGGAAACACTGCCGTCGC+CGG + chr3_2:85916718-85916737 None:intergenic 55.0%
TTTACCGCTGGAGACAGCAG+GGG + chr3_2:85916769-85916788 None:intergenic 55.0%
GTTTACCGCTGGAGACAGCA+GGG + chr3_2:85916770-85916789 None:intergenic 55.0%
GCCTTTGCTCGCGATATCAC+CGG - chr3_2:85916825-85916844 Msa0433430:intron 55.0%
AGTGTCTCCAATGGCAGGCT+AGG - chr3_2:85916855-85916874 Msa0433430:intron 55.0%
ACATGGACCTAGCCTGCCAT+TGG + chr3_2:85916865-85916884 None:intergenic 55.0%
TGTTTACCACGGGAGACAGC+GGG + chr3_2:85916912-85916931 None:intergenic 55.0%
CTGTTTACCACGGGAGACAG+CGG + chr3_2:85916913-85916932 None:intergenic 55.0%
! GTGATGGGGGAGGACATGAA+TGG + chr3_2:85916954-85916973 None:intergenic 55.0%
TTCATGTCCTCCCCCATCAC+CGG - chr3_2:85916954-85916973 Msa0433430:intron 55.0%
GGCGAAGCCAGTGTTTCCAA+TGG - chr3_2:85916987-85917006 Msa0433430:intron 55.0%
GAGATAGAAGGGGTGAGGAG+TGG + chr3_2:85917029-85917048 None:intergenic 55.0%
CACAGGAGATAGAAGGGGTG+AGG + chr3_2:85917034-85917053 None:intergenic 55.0%
CTCACCCCTTCTATCTCCTG+TGG - chr3_2:85917032-85917051 Msa0433430:CDS 55.0%
TTCATGTCCTCCGCCATCAC+CGG - chr3_2:85917083-85917102 Msa0433430:CDS 55.0%
AACGCTTCTATCGCCGGTGA+TGG + chr3_2:85917099-85917118 None:intergenic 55.0%
GCTGGAAACGCTTCTATCGC+CGG + chr3_2:85917105-85917124 None:intergenic 55.0%
!! GGCGATAGAAGCGTTTCCAG+CGG - chr3_2:85917104-85917123 Msa0433430:CDS 55.0%
!! ATAGAAGCGTTTCCAGCGGC+AGG - chr3_2:85917108-85917127 Msa0433430:CDS 55.0%
! GCAGGGGTGAGGGTATAAGA+TGG + chr3_2:85917140-85917159 None:intergenic 55.0%
GGTTTACCACCAGAGACAGC+AGG + chr3_2:85917158-85917177 None:intergenic 55.0%
AATCACTCCGGCGATGTCTC+TGG - chr3_2:85917215-85917234 Msa0433430:CDS 55.0%
ATCACTCCGGCGATGTCTCT+GGG - chr3_2:85917216-85917235 Msa0433430:CDS 55.0%
! GGTTTTCCCAGAGACATCGC+CGG + chr3_2:85917225-85917244 None:intergenic 55.0%
! TCTGGTTCAGGTTCAGGGAG+TGG - chr3_2:85917952-85917971 Msa0433430:CDS 55.0%
! CTGGTTCAGGTTCAGGGAGT+GGG - chr3_2:85917953-85917972 Msa0433430:CDS 55.0%
! AGGGAGTGGGAGCATGGATT+TGG - chr3_2:85917966-85917985 Msa0433430:CDS 55.0%
! GGGAGTGGGAGCATGGATTT+GGG - chr3_2:85917967-85917986 Msa0433430:CDS 55.0%
! GGAGTGGGAGCATGGATTTG+GGG - chr3_2:85917968-85917987 Msa0433430:CDS 55.0%
! GAGTGGGAGCATGGATTTGG+GGG - chr3_2:85917969-85917988 Msa0433430:CDS 55.0%
GGGTTGCATTTGGATTGCGG+CGG + chr3_2:85916479-85916498 None:intergenic 55.0%
TTGTGGCAGCGGTTGATCAG+GGG + chr3_2:85916499-85916518 None:intergenic 55.0%
GTTTGTGGCAGCGGTTGATC+AGG + chr3_2:85916501-85916520 None:intergenic 55.0%
GGAGTGGAAGTTTGTGGCAG+CGG + chr3_2:85916510-85916529 None:intergenic 55.0%
GTGGAGGGAGTGGAAGTTTG+TGG + chr3_2:85916516-85916535 None:intergenic 55.0%
! ATGGCGGAGGATAGGAGTGA+TGG + chr3_2:85916693-85916712 None:intergenic 55.0%
ATTGGAAACACTGCCGTCGC+CGG + chr3_2:85916718-85916737 None:intergenic 55.0%
TTTACCGCTGGAGACAGCAG+GGG + chr3_2:85916769-85916788 None:intergenic 55.0%
GTTTACCGCTGGAGACAGCA+GGG + chr3_2:85916770-85916789 None:intergenic 55.0%
GCCTTTGCTCGCGATATCAC+CGG - chr3_2:85916825-85916844 Msa0433430:intron 55.0%
AGTGTCTCCAATGGCAGGCT+AGG - chr3_2:85916855-85916874 Msa0433430:intron 55.0%
ACATGGACCTAGCCTGCCAT+TGG + chr3_2:85916865-85916884 None:intergenic 55.0%
TGTTTACCACGGGAGACAGC+GGG + chr3_2:85916912-85916931 None:intergenic 55.0%
CTGTTTACCACGGGAGACAG+CGG + chr3_2:85916913-85916932 None:intergenic 55.0%
! GTGATGGGGGAGGACATGAA+TGG + chr3_2:85916954-85916973 None:intergenic 55.0%
TTCATGTCCTCCCCCATCAC+CGG - chr3_2:85916954-85916973 Msa0433430:intron 55.0%
GGCGAAGCCAGTGTTTCCAA+TGG - chr3_2:85916987-85917006 Msa0433430:intron 55.0%
GAGATAGAAGGGGTGAGGAG+TGG + chr3_2:85917029-85917048 None:intergenic 55.0%
CACAGGAGATAGAAGGGGTG+AGG + chr3_2:85917034-85917053 None:intergenic 55.0%
CTCACCCCTTCTATCTCCTG+TGG - chr3_2:85917032-85917051 Msa0433430:CDS 55.0%
TTCATGTCCTCCGCCATCAC+CGG - chr3_2:85917083-85917102 Msa0433430:CDS 55.0%
AACGCTTCTATCGCCGGTGA+TGG + chr3_2:85917099-85917118 None:intergenic 55.0%
GCTGGAAACGCTTCTATCGC+CGG + chr3_2:85917105-85917124 None:intergenic 55.0%
!! GGCGATAGAAGCGTTTCCAG+CGG - chr3_2:85917104-85917123 Msa0433430:CDS 55.0%
!! ATAGAAGCGTTTCCAGCGGC+AGG - chr3_2:85917108-85917127 Msa0433430:CDS 55.0%
! GCAGGGGTGAGGGTATAAGA+TGG + chr3_2:85917140-85917159 None:intergenic 55.0%
GGTTTACCACCAGAGACAGC+AGG + chr3_2:85917158-85917177 None:intergenic 55.0%
AATCACTCCGGCGATGTCTC+TGG - chr3_2:85917215-85917234 Msa0433430:CDS 55.0%
ATCACTCCGGCGATGTCTCT+GGG - chr3_2:85917216-85917235 Msa0433430:CDS 55.0%
! GGTTTTCCCAGAGACATCGC+CGG + chr3_2:85917225-85917244 None:intergenic 55.0%
! TCTGGTTCAGGTTCAGGGAG+TGG - chr3_2:85917952-85917971 Msa0433430:CDS 55.0%
! CTGGTTCAGGTTCAGGGAGT+GGG - chr3_2:85917953-85917972 Msa0433430:CDS 55.0%
! AGGGAGTGGGAGCATGGATT+TGG - chr3_2:85917966-85917985 Msa0433430:CDS 55.0%
! GGGAGTGGGAGCATGGATTT+GGG - chr3_2:85917967-85917986 Msa0433430:CDS 55.0%
! GGAGTGGGAGCATGGATTTG+GGG - chr3_2:85917968-85917987 Msa0433430:CDS 55.0%
! GAGTGGGAGCATGGATTTGG+GGG - chr3_2:85917969-85917988 Msa0433430:CDS 55.0%
GGAAGCGAGCGTGGCCTTTA+CGG + chr3_2:85916458-85916477 None:intergenic 60.0%
CTGAGTAGAGGTGGAGGGAG+TGG + chr3_2:85916526-85916545 None:intergenic 60.0%
GGTGGCTGAGTAGAGGTGGA+GGG + chr3_2:85916531-85916550 None:intergenic 60.0%
AGGTGGCTGAGTAGAGGTGG+AGG + chr3_2:85916532-85916551 None:intergenic 60.0%
TGGAGGTGGCTGAGTAGAGG+TGG + chr3_2:85916535-85916554 None:intergenic 60.0%
TGGTGGAGGTGGCTGAGTAG+AGG + chr3_2:85916538-85916557 None:intergenic 60.0%
!! TGAAGTGGTGGTGGTGGAGG+TGG + chr3_2:85916549-85916568 None:intergenic 60.0%
CTCCTATCCTCCGCCATCAC+CGG - chr3_2:85916696-85916715 Msa0433430:intron 60.0%
GGCGACGGCAGTGTTTCCAA+TGG - chr3_2:85916717-85916736 Msa0433430:intron 60.0%
GGTTTACCGCTGGAGACAGC+AGG + chr3_2:85916771-85916790 None:intergenic 60.0%
GCCGGTGATATCGCGAGCAA+AGG + chr3_2:85916829-85916848 None:intergenic 60.0%
ATTGGAGACACTGCCGTCGC+CGG + chr3_2:85916847-85916866 None:intergenic 60.0%
ACGGCAGTGTCTCCAATGGC+AGG - chr3_2:85916850-85916869 Msa0433430:intron 60.0%
!! GTGGGGATGGTGGATGGCAT+TGG + chr3_2:85916888-85916907 None:intergenic 60.0%
TTTACCACGGGAGACAGCGG+GGG + chr3_2:85916910-85916929 None:intergenic 60.0%
GTTTACCACGGGAGACAGCG+GGG + chr3_2:85916911-85916930 None:intergenic 60.0%
! GGTGTAATGGCCGGTGATGG+GGG + chr3_2:85916967-85916986 None:intergenic 60.0%
CGGTGTAATGGCCGGTGATG+GGG + chr3_2:85916968-85916987 None:intergenic 60.0%
CCGGTGTAATGGCCGGTGAT+GGG + chr3_2:85916969-85916988 None:intergenic 60.0%
CCCATCACCGGCCATTACAC+CGG - chr3_2:85916966-85916985 Msa0433430:intron 60.0%
!! CACTGGCTTCGCCGGTGTAA+TGG + chr3_2:85916980-85916999 None:intergenic 60.0%
GAAGGGGTGAGGAGTGGAGA+TGG + chr3_2:85917023-85917042 None:intergenic 60.0%
! GCTTCTATCGCCGGTGATGG+CGG + chr3_2:85917096-85917115 None:intergenic 60.0%
AGCGTTTCCAGCGGCAGGAT+CGG - chr3_2:85917113-85917132 Msa0433430:CDS 60.0%
ACCAGAGACAGCAGGGGTGA+GGG + chr3_2:85917150-85917169 None:intergenic 60.0%
AGGTTCAGGGAGTGGGAGCA+TGG - chr3_2:85917960-85917979 Msa0433430:CDS 60.0%
GGAAGCGAGCGTGGCCTTTA+CGG + chr3_2:85916458-85916477 None:intergenic 60.0%
CTGAGTAGAGGTGGAGGGAG+TGG + chr3_2:85916526-85916545 None:intergenic 60.0%
GGTGGCTGAGTAGAGGTGGA+GGG + chr3_2:85916531-85916550 None:intergenic 60.0%
AGGTGGCTGAGTAGAGGTGG+AGG + chr3_2:85916532-85916551 None:intergenic 60.0%
TGGAGGTGGCTGAGTAGAGG+TGG + chr3_2:85916535-85916554 None:intergenic 60.0%
TGGTGGAGGTGGCTGAGTAG+AGG + chr3_2:85916538-85916557 None:intergenic 60.0%
!! TGAAGTGGTGGTGGTGGAGG+TGG + chr3_2:85916549-85916568 None:intergenic 60.0%
CTCCTATCCTCCGCCATCAC+CGG - chr3_2:85916696-85916715 Msa0433430:intron 60.0%
GGCGACGGCAGTGTTTCCAA+TGG - chr3_2:85916717-85916736 Msa0433430:intron 60.0%
GGTTTACCGCTGGAGACAGC+AGG + chr3_2:85916771-85916790 None:intergenic 60.0%
GCCGGTGATATCGCGAGCAA+AGG + chr3_2:85916829-85916848 None:intergenic 60.0%
ATTGGAGACACTGCCGTCGC+CGG + chr3_2:85916847-85916866 None:intergenic 60.0%
ACGGCAGTGTCTCCAATGGC+AGG - chr3_2:85916850-85916869 Msa0433430:intron 60.0%
!! GTGGGGATGGTGGATGGCAT+TGG + chr3_2:85916888-85916907 None:intergenic 60.0%
TTTACCACGGGAGACAGCGG+GGG + chr3_2:85916910-85916929 None:intergenic 60.0%
GTTTACCACGGGAGACAGCG+GGG + chr3_2:85916911-85916930 None:intergenic 60.0%
! GGTGTAATGGCCGGTGATGG+GGG + chr3_2:85916967-85916986 None:intergenic 60.0%
CGGTGTAATGGCCGGTGATG+GGG + chr3_2:85916968-85916987 None:intergenic 60.0%
CCGGTGTAATGGCCGGTGAT+GGG + chr3_2:85916969-85916988 None:intergenic 60.0%
CCCATCACCGGCCATTACAC+CGG - chr3_2:85916966-85916985 Msa0433430:intron 60.0%
!! CACTGGCTTCGCCGGTGTAA+TGG + chr3_2:85916980-85916999 None:intergenic 60.0%
GAAGGGGTGAGGAGTGGAGA+TGG + chr3_2:85917023-85917042 None:intergenic 60.0%
! GCTTCTATCGCCGGTGATGG+CGG + chr3_2:85917096-85917115 None:intergenic 60.0%
AGCGTTTCCAGCGGCAGGAT+CGG - chr3_2:85917113-85917132 Msa0433430:CDS 60.0%
ACCAGAGACAGCAGGGGTGA+GGG + chr3_2:85917150-85917169 None:intergenic 60.0%
AGGTTCAGGGAGTGGGAGCA+TGG - chr3_2:85917960-85917979 Msa0433430:CDS 60.0%
AGCGAGCGTGGCCTTTACGG+TGG + chr3_2:85916455-85916474 None:intergenic 65.0%
AACACTGCCGTCGCCGGTGA+TGG + chr3_2:85916712-85916731 None:intergenic 65.0%
CTCACCCCTGCTGTCTCCAG+CGG - chr3_2:85916762-85916781 Msa0433430:intron 65.0%
GCTCGCGATATCACCGGCGA+CGG - chr3_2:85916831-85916850 Msa0433430:intron 65.0%
GGCGACGGCAGTGTCTCCAA+TGG - chr3_2:85916846-85916865 Msa0433430:intron 65.0%
!! GTAATGGCCGGTGATGGGGG+AGG + chr3_2:85916964-85916983 None:intergenic 65.0%
GCCGGTGTAATGGCCGGTGA+TGG + chr3_2:85916970-85916989 None:intergenic 65.0%
GGCTTCGCCGGTGTAATGGC+CGG + chr3_2:85916976-85916995 None:intergenic 65.0%
!! TCTATCGCCGGTGATGGCGG+AGG + chr3_2:85917093-85917112 None:intergenic 65.0%
AGATGGACCGATCCTGCCGC+TGG + chr3_2:85917123-85917142 None:intergenic 65.0%
ACCCTCACCCCTGCTGTCTC+TGG - chr3_2:85917146-85917165 Msa0433430:CDS 65.0%
CACCAGAGACAGCAGGGGTG+AGG + chr3_2:85917151-85917170 None:intergenic 65.0%
CTCACCCCTGCTGTCTCTGG+TGG - chr3_2:85917149-85917168 Msa0433430:CDS 65.0%
AGCGAGCGTGGCCTTTACGG+TGG + chr3_2:85916455-85916474 None:intergenic 65.0%
AACACTGCCGTCGCCGGTGA+TGG + chr3_2:85916712-85916731 None:intergenic 65.0%
CTCACCCCTGCTGTCTCCAG+CGG - chr3_2:85916762-85916781 Msa0433430:intron 65.0%
GCTCGCGATATCACCGGCGA+CGG - chr3_2:85916831-85916850 Msa0433430:intron 65.0%
GGCGACGGCAGTGTCTCCAA+TGG - chr3_2:85916846-85916865 Msa0433430:intron 65.0%
!! GTAATGGCCGGTGATGGGGG+AGG + chr3_2:85916964-85916983 None:intergenic 65.0%
GCCGGTGTAATGGCCGGTGA+TGG + chr3_2:85916970-85916989 None:intergenic 65.0%
GGCTTCGCCGGTGTAATGGC+CGG + chr3_2:85916976-85916995 None:intergenic 65.0%
!! TCTATCGCCGGTGATGGCGG+AGG + chr3_2:85917093-85917112 None:intergenic 65.0%
AGATGGACCGATCCTGCCGC+TGG + chr3_2:85917123-85917142 None:intergenic 65.0%
ACCCTCACCCCTGCTGTCTC+TGG - chr3_2:85917146-85917165 Msa0433430:CDS 65.0%
CACCAGAGACAGCAGGGGTG+AGG + chr3_2:85917151-85917170 None:intergenic 65.0%
CTCACCCCTGCTGTCTCTGG+TGG - chr3_2:85917149-85917168 Msa0433430:CDS 65.0%
GATTGCGGCGGAAGCGAGCG+TGG + chr3_2:85916467-85916486 None:intergenic 70.0%
!! CGCCGGTGATGGCGGAGGAT+AGG + chr3_2:85916701-85916720 None:intergenic 70.0%
TCCTCCGCCATCACCGGCGA+CGG - chr3_2:85916702-85916721 Msa0433430:intron 70.0%
! ACTGCCGTCGCCGGTGATGG+CGG + chr3_2:85916709-85916728 None:intergenic 70.0%
GATTGCGGCGGAAGCGAGCG+TGG + chr3_2:85916467-85916486 None:intergenic 70.0%
!! CGCCGGTGATGGCGGAGGAT+AGG + chr3_2:85916701-85916720 None:intergenic 70.0%
TCCTCCGCCATCACCGGCGA+CGG - chr3_2:85916702-85916721 Msa0433430:intron 70.0%
! ACTGCCGTCGCCGGTGATGG+CGG + chr3_2:85916709-85916728 None:intergenic 70.0%
!! GCGGGGGTGGGGATGGTGGA+TGG + chr3_2:85916894-85916913 None:intergenic 75.0%
GACAGCGGGGGTGGGGATGG+TGG + chr3_2:85916898-85916917 None:intergenic 75.0%
GGAGACAGCGGGGGTGGGGA+TGG + chr3_2:85916901-85916920 None:intergenic 75.0%
CACGGGAGACAGCGGGGGTG+GGG + chr3_2:85916905-85916924 None:intergenic 75.0%
CCACGGGAGACAGCGGGGGT+GGG + chr3_2:85916906-85916925 None:intergenic 75.0%
ACCACGGGAGACAGCGGGGG+TGG + chr3_2:85916907-85916926 None:intergenic 75.0%
!! GCGGGGGTGGGGATGGTGGA+TGG + chr3_2:85916894-85916913 None:intergenic 75.0%
GACAGCGGGGGTGGGGATGG+TGG + chr3_2:85916898-85916917 None:intergenic 75.0%
GGAGACAGCGGGGGTGGGGA+TGG + chr3_2:85916901-85916920 None:intergenic 75.0%
CACGGGAGACAGCGGGGGTG+GGG + chr3_2:85916905-85916924 None:intergenic 75.0%
CCACGGGAGACAGCGGGGGT+GGG + chr3_2:85916906-85916925 None:intergenic 75.0%
ACCACGGGAGACAGCGGGGG+TGG + chr3_2:85916907-85916926 None:intergenic 75.0%
!!! GCCGTCGCCGGTGATGGCGG+AGG + chr3_2:85916706-85916725 None:intergenic 80.0%
! CCCACCCCCGCTGTCTCCCG+TGG - chr3_2:85916903-85916922 Msa0433430:intron 80.0%
!!! GCCGTCGCCGGTGATGGCGG+AGG + chr3_2:85916706-85916725 None:intergenic 80.0%
! CCCACCCCCGCTGTCTCCCG+TGG - chr3_2:85916903-85916922 Msa0433430:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 85916264 85918020 85916264 ID=Msa0433430;Name=Msa0433430
chr3_2 mRNA 85916264 85918020 85916264 ID=Msa0433430-mRNA-1;Parent=Msa0433430;Name=Msa0433430-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|452
chr3_2 exon 85917008 85918020 85917008 ID=Msa0433430-mRNA-1:exon:24739;Parent=Msa0433430-mRNA-1
chr3_2 exon 85916582 85916707 85916582 ID=Msa0433430-mRNA-1:exon:24738;Parent=Msa0433430-mRNA-1
chr3_2 exon 85916264 85916483 85916264 ID=Msa0433430-mRNA-1:exon:24737;Parent=Msa0433430-mRNA-1
chr3_2 CDS 85917008 85918020 85917008 ID=Msa0433430-mRNA-1:cds;Parent=Msa0433430-mRNA-1
chr3_2 CDS 85916582 85916707 85916582 ID=Msa0433430-mRNA-1:cds;Parent=Msa0433430-mRNA-1
chr3_2 CDS 85916264 85916483 85916264 ID=Msa0433430-mRNA-1:cds;Parent=Msa0433430-mRNA-1
Gene Sequence

>Msa0433430

ATGACTTTGAGATTGATGGATTTTCCAAACATGGATGAGGAAAAAGAAAAAGCAATATTAGAAACTGCCACACAAGGCTTAAACTCACTTGCCAACTTCGCTAATAATGTCTCTCCCCAAGCCTCTCTTCAAAACACTGAACTCACCAACATCACTGTTTCAGACCTCAAGAAACTATCCAACTTACTCCACCGTAAAGGCCACGCTCGCTTCCGCCGCAATCCAAATGCAACCCCTGATCAACCGCTGCCACAAACTTCCACTCCCTCCACCTCTACTCAGCCACCTCCACCACCACCACTTCAAATTCAAATTCCTCCTAAGAGCCATAACCAACCTTTAACTCTCGATTTTACTAAACCTTACACCTTTAAATCTAACCCTAAATCCTTAGATCTAGAAATCCCCAAGGAAACATTTAGTTTTCCATCACTCCTATCCTCCGCCATCACCGGCGACGGCAGTGTTTCCAATGGCAGACTTGGTCCATCTCAAATTCTCACCCCTGCTGTCTCCAGCGGTAAACCACCTCTTTCACCTAACTCATCATTCATGTCATCTGCCTTTGCTCGCGATATCACCGGCGACGGCAGTGTCTCCAATGGCAGGCTAGGTCCATGTCCAATGCCATCCACCATCCCCACCCCCGCTGTCTCCCGTGGTAAACAGCCTCTTTCTTCTATCTCACCATTCATGTCCTCCCCCATCACCGGCCATTACACCGGCGAAGCCAGTGTTTCCAATGGCAGACTAGGACCATCTCCACTCCTCACCCCTTCTATCTCCTGTGGTAAACAGCCTCTTACATCTTACTCATCTTTCATGTCCTCCGCCATCACCGGCGATAGAAGCGTTTCCAGCGGCAGGATCGGTCCATCTTATACCCTCACCCCTGCTGTCTCTGGTGGTAAACCGCCTCTTTTATCGCCGTCATTGAAGAAAAGCTGTCACAATCACTCCGGCGATGTCTCTGGGAAAACCTCCGCATCTAAGAAATGCCACTGCCAGAAAAGGAAAAATCGGAACAGGAGACAAGTGAGAGTCCCGTGCATAAGTTCAAGGATTGCTGATATACCAGCAGATGAGTATTCATGGAGGAAGTATGGTTCCAAACCGATTAAGGGAACACCACATCCAAGGGGTTATTATAGGTGCACTATGTCTAAAAATTGTCCAGCTAGGAAAAGGGTGGAGAAGGCGAAAGATGATCCAAATATACTAGTTGTAACGTATGAGTTTGAGCATCGTCACCACCAGCTTCATAATCAAGCCCCAATGCAAGAGAATAATTCTGGTTCAGGTTCAGGGAGTGGGAGCATGGATTTGGGGGTGTTTGAGCTAACCTTAGGAGGGAATTAG
Protein sequence

>Msa0433430

MTLRLMDFPNMDEEKEKAILETATQGLNSLANFANNVSPQASLQNTELTNITVSDLKKLSNLLHRKGHARFRRNPNATPDQPLPQTSTPSTSTQPPPPPPLQIQIPPKSHNQPLTLDFTKPYTFKSNPKSLDLEIPKETFSFPSLLSSAITGDGSVSNGRLGPSQILTPAVSSGKPPLSPNSSFMSSAFARDITGDGSVSNGRLGPCPMPSTIPTPAVSRGKQPLSSISPFMSSPITGHYTGEASVSNGRLGPSPLLTPSISCGKQPLTSYSSFMSSAITGDRSVSSGRIGPSYTLTPAVSGGKPPLLSPSLKKSCHNHSGDVSGKTSASKKCHCQKRKNRNRRQVRVPCISSRIADIPADEYSWRKYGSKPIKGTPHPRGYYRCTMSKNCPARKRVEKAKDDPNILVVTYEFEHRHHQLHNQAPMQENNSGSGSGSGSMDLGVFELTLGGN*