Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437030 | XP_024626574.1 | 70.169 | 295 | 46 | 6 | 1 | 289 | 1 | 259 | 4.75e-129 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437030 | sp|Q9SZL8|FRS5_ARATH | 38.462 | 143 | 80 | 4 | 152 | 288 | 77 | 217 | 2.86e-12 | 72.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437030 | A0A072TYR1 | 66.978 | 321 | 62 | 8 | 1 | 313 | 1 | 285 | 4.37e-129 | 390 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0437030 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437030 | MtrunA17_Chr2g0287651 | 65.432 | 162 | 53 | 1 | 131 | 289 | 58 | 219 | 4.41e-71 | 240 |
| Msa0437030 | MtrunA17_Chr2g0287651 | 62.903 | 62 | 23 | 0 | 289 | 350 | 497 | 558 | 3.04e-18 | 87.4 |
| Msa0437030 | MtrunA17_Chr1g0203051 | 34.272 | 213 | 125 | 5 | 97 | 295 | 20 | 231 | 6.00e-30 | 122 |
| Msa0437030 | MtrunA17_Chr1g0171741 | 31.757 | 148 | 95 | 2 | 130 | 275 | 119 | 262 | 2.10e-20 | 90.5 |
| Msa0437030 | MtrunA17_Chr8g0389811 | 36.232 | 138 | 81 | 3 | 116 | 246 | 48 | 185 | 4.15e-19 | 85.5 |
| Msa0437030 | MtrunA17_Chr6g0458391 | 35.036 | 137 | 78 | 5 | 152 | 279 | 95 | 229 | 9.40e-16 | 79.7 |
| Msa0437030 | MtrunA17_Chr6g0458391 | 40.164 | 122 | 68 | 4 | 139 | 256 | 214 | 334 | 5.87e-14 | 74.3 |
| Msa0437030 | MtrunA17_Chr5g0448761 | 37.762 | 143 | 82 | 3 | 152 | 288 | 64 | 205 | 6.85e-14 | 73.9 |
| Msa0437030 | MtrunA17_Chr6g0473421 | 42.500 | 80 | 43 | 1 | 144 | 220 | 51 | 130 | 9.63e-14 | 68.6 |
| Msa0437030 | MtrunA17_Chr1g0203721 | 39.831 | 118 | 62 | 6 | 145 | 256 | 61 | 175 | 3.19e-13 | 72.0 |
| Msa0437030 | MtrunA17_Chr1g0202341 | 34.247 | 146 | 85 | 7 | 147 | 285 | 50 | 191 | 6.16e-12 | 67.8 |
| Msa0437030 | MtrunA17_Chr7g0238821 | 33.636 | 110 | 69 | 3 | 152 | 259 | 1 | 108 | 1.63e-11 | 60.8 |
| Msa0437030 | MtrunA17_Chr2g0329361 | 38.393 | 112 | 58 | 4 | 142 | 246 | 55 | 162 | 2.15e-11 | 63.9 |
| Msa0437030 | MtrunA17_Chr2g0331371 | 32.540 | 126 | 82 | 1 | 144 | 266 | 51 | 176 | 2.23e-11 | 63.2 |
| Msa0437030 | MtrunA17_Chr6g0479721 | 48.246 | 114 | 45 | 4 | 1 | 113 | 1 | 101 | 2.23e-11 | 61.2 |
| Msa0437030 | MtrunA17_Chr1g0198761 | 27.703 | 148 | 96 | 3 | 154 | 290 | 53 | 200 | 3.93e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437030 | AT4G38180.1 | 38.462 | 143 | 80 | 4 | 152 | 288 | 77 | 217 | 2.91e-13 | 72.4 |
| Msa0437030 | AT3G07500.1 | 41.584 | 101 | 56 | 3 | 152 | 250 | 37 | 136 | 3.20e-13 | 68.9 |
| Msa0437030 | AT1G10240.2 | 31.469 | 143 | 92 | 3 | 154 | 290 | 54 | 196 | 7.61e-12 | 67.8 |
| Msa0437030 | AT1G10240.1 | 31.469 | 143 | 92 | 3 | 154 | 290 | 54 | 196 | 7.61e-12 | 67.8 |
Find 87 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGCCTTTACTGATTT+TGG | 0.059598 | 3_2:+90984844 | Msa0437030:CDS |
| ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 3_2:-90987477 | None:intergenic |
| ATCCTGCTCCCACGTCTTTC+TGG | 0.117062 | 3_2:-90987579 | None:intergenic |
| GCAAGCACTGAGCATCTTTC+TGG | 0.124164 | 3_2:+90987433 | Msa0437030:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 3_2:+90985722 | Msa0437030:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.264525 | 3_2:+90985649 | Msa0437030:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 3_2:+90985563 | Msa0437030:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 3_2:+90985072 | Msa0437030:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 3_2:+90985307 | Msa0437030:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 3_2:+90985314 | Msa0437030:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 3_2:+90985400 | Msa0437030:CDS |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 3_2:-90985623 | None:intergenic |
| TGGCTAGCATGCTGAGACAT+TGG | 0.368552 | 3_2:-90987457 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 3_2:+90985723 | Msa0437030:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 3_2:+90984865 | Msa0437030:CDS |
| CAAGCACTGAGCATCTTTCT+GGG | 0.411830 | 3_2:+90987434 | Msa0437030:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 3_2:+90985096 | Msa0437030:CDS |
| TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 3_2:+90985372 | Msa0437030:CDS |
| GATGAGCGATATGAAGAAAC+TGG | 0.434304 | 3_2:+90985039 | Msa0437030:CDS |
| CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 3_2:+90986682 | Msa0437030:CDS |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 3_2:+90985414 | Msa0437030:CDS |
| TAGCTAGCATGCTGAGACAT+GGG | 0.456278 | 3_2:-90987661 | None:intergenic |
| TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 3_2:-90987559 | None:intergenic |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 3_2:-90985549 | None:intergenic |
| GAAACATATCCGATCATTGT+TGG | 0.469215 | 3_2:+90984913 | Msa0437030:CDS |
| GAGATAAGAAGCATTTATCA+AGG | 0.475640 | 3_2:+90985481 | Msa0437030:CDS |
| AGACGTGGGAGCAGGATCAA+AGG | 0.477291 | 3_2:+90987585 | Msa0437030:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 3_2:+90985684 | Msa0437030:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 3_2:+90984879 | Msa0437030:CDS |
| CAGCACAGGGGATGAAAACC+TGG | 0.488423 | 3_2:-90986633 | None:intergenic |
| CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 3_2:-90987560 | None:intergenic |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 3_2:+90985087 | Msa0437030:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 3_2:-90986647 | None:intergenic |
| AAACATATCCGATCATTGTT+GGG | 0.491804 | 3_2:+90984914 | Msa0437030:CDS |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 3_2:-90984871 | None:intergenic |
| AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 3_2:+90987483 | Msa0437030:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 3_2:+90985452 | Msa0437030:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 3_2:+90985272 | Msa0437030:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 3_2:+90985261 | Msa0437030:CDS |
| GACGTGGGAGCAGGATCAAA+GGG | 0.507704 | 3_2:+90987586 | Msa0437030:CDS |
| AGCCAGAAAGACGTGGGAGC+AGG | 0.508124 | 3_2:+90987577 | Msa0437030:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 3_2:+90985300 | Msa0437030:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 3_2:+90984922 | Msa0437030:CDS |
| CGGTGTACCAAAATCAGTAA+AGG | 0.530148 | 3_2:-90984851 | None:intergenic |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 3_2:-90984922 | None:intergenic |
| GTGAAAGAAGAAATTATGAA+AGG | 0.548916 | 3_2:+90986722 | Msa0437030:CDS |
| GGAACATGATTACGGTTCTA+CGG | 0.552732 | 3_2:+90984873 | Msa0437030:CDS |
| TTAGCTAGCATGCTGAGACA+TGG | 0.553987 | 3_2:-90987662 | None:intergenic |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 3_2:+90985731 | Msa0437030:CDS |
| GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 3_2:+90987484 | Msa0437030:CDS |
| TGTAAATGCACAGCATTGGT+TGG | 0.565762 | 3_2:-90985636 | None:intergenic |
| AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 3_2:+90987475 | Msa0437030:CDS |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 3_2:+90985277 | Msa0437030:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.573961 | 3_2:+90984919 | Msa0437030:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 3_2:-90986646 | None:intergenic |
| AGAAAGATGCTCAGTGCTTG+CGG | 0.581054 | 3_2:-90987431 | None:intergenic |
| ATTGATGGTCTTCAGTCATA+CGG | 0.582526 | 3_2:+90985699 | Msa0437030:CDS |
| AGGGTGTAAATGCACAGCAT+TGG | 0.584309 | 3_2:-90985640 | None:intergenic |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 3_2:+90985453 | Msa0437030:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 3_2:+90985108 | Msa0437030:CDS |
| GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 3_2:+90987468 | Msa0437030:CDS |
| GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 3_2:+90987570 | Msa0437030:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 3_2:+90985060 | Msa0437030:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 3_2:-90985679 | None:intergenic |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 3_2:+90985222 | Msa0437030:CDS |
| TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 3_2:+90986664 | Msa0437030:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 3_2:+90985141 | Msa0437030:CDS |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 3_2:+90985454 | Msa0437030:CDS |
| TGCACAGCATTGGTTGGAGT+AGG | 0.638605 | 3_2:-90985630 | None:intergenic |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 3_2:+90985535 | Msa0437030:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 3_2:+90985266 | Msa0437030:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 3_2:+90985213 | Msa0437030:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.679569 | 3_2:+90984982 | Msa0437030:CDS |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 3_2:+90985430 | Msa0437030:CDS |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 3_2:+90986742 | Msa0437030:CDS |
| CATGCTAGCCAGAAAGACGT+GGG | 0.690224 | 3_2:+90987571 | Msa0437030:CDS |
| AGTCAAGGTGATGAAGGTGA+AGG | 0.696692 | 3_2:+90985147 | Msa0437030:CDS |
| CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 3_2:+90987469 | Msa0437030:CDS |
| AGTGAAGGTCATGCTAGTGA+AGG | 0.698593 | 3_2:+90985177 | Msa0437030:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 3_2:+90985662 | Msa0437030:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 3_2:+90985063 | Msa0437030:CDS |
| GTGGGAGCAGGATCAAAGGG+AGG | 0.712846 | 3_2:+90987589 | Msa0437030:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 3_2:+90985207 | Msa0437030:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.731903 | 3_2:+90985192 | Msa0437030:CDS |
| GGTGAAGGTGATGAAAGTGA+AGG | 0.739796 | 3_2:+90985162 | Msa0437030:CDS |
| AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 3_2:+90985132 | Msa0437030:CDS |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 3_2:-90986645 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | + | chr3_2:90985360-90985379 | Msa0437030:CDS | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | + | chr3_2:90985722-90985741 | Msa0437030:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | + | chr3_2:90985723-90985742 | Msa0437030:CDS | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | + | chr3_2:90986522-90986541 | Msa0437030:intron | 20.0% |
| !! | CTTCAACACAAAAAAAATAT+GGG | - | chr3_2:90986909-90986928 | None:intergenic | 20.0% |
| ! | AATTATACGAAGAATACTCA+AGG | + | chr3_2:90985006-90985025 | Msa0437030:intron | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | + | chr3_2:90985007-90985026 | Msa0437030:intron | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | + | chr3_2:90985300-90985319 | Msa0437030:CDS | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | + | chr3_2:90985821-90985840 | Msa0437030:intron | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | - | chr3_2:90985865-90985884 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | - | chr3_2:90985866-90985885 | None:intergenic | 25.0% |
| ! | AGAATATTCACAAAAGGAAT+GGG | - | chr3_2:90985901-90985920 | None:intergenic | 25.0% |
| !!! | AACGTTTGAAATGTCTATTT+TGG | + | chr3_2:90985934-90985953 | Msa0437030:intron | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | + | chr3_2:90985935-90985954 | Msa0437030:intron | 25.0% |
| ! | AAACAATAGACACTTATATG+TGG | + | chr3_2:90986117-90986136 | Msa0437030:intron | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | + | chr3_2:90986118-90986137 | Msa0437030:intron | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | + | chr3_2:90986331-90986350 | Msa0437030:intron | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | - | chr3_2:90986426-90986445 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | + | chr3_2:90986430-90986449 | Msa0437030:intron | 25.0% |
| ! | GTGAAAGAAGAAATTATGAA+AGG | + | chr3_2:90986722-90986741 | Msa0437030:CDS | 25.0% |
| ! | CCTTCAACACAAAAAAAATA+TGG | - | chr3_2:90986910-90986929 | None:intergenic | 25.0% |
| !!! | CCATATTTTTTTTGTGTTGA+AGG | + | chr3_2:90986907-90986926 | Msa0437030:intron | 25.0% |
| !! | ATGTGTTTACAAATTTTTGC+AGG | + | chr3_2:90987071-90987090 | Msa0437030:intron | 25.0% |
| !! | TGTGTTTACAAATTTTTGCA+GGG | + | chr3_2:90987072-90987091 | Msa0437030:intron | 25.0% |
| !! | GAACATTTTCTTACAAACTT+TGG | - | chr3_2:90987271-90987290 | None:intergenic | 25.0% |
| !!! | AACAATGCCTTTACTGATTT+TGG | + | chr3_2:90984844-90984863 | Msa0437030:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | + | chr3_2:90984914-90984933 | Msa0437030:CDS | 30.0% | |
| TATAAGTACGGTAAGTGTAA+TGG | + | chr3_2:90985372-90985391 | Msa0437030:CDS | 30.0% | |
| !! | GAGATAAGAAGCATTTATCA+AGG | + | chr3_2:90985481-90985500 | Msa0437030:CDS | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | + | chr3_2:90985490-90985509 | Msa0437030:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | - | chr3_2:90985579-90985598 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | + | chr3_2:90985593-90985612 | Msa0437030:CDS | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | + | chr3_2:90985594-90985613 | Msa0437030:CDS | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | + | chr3_2:90985731-90985750 | Msa0437030:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+GGG | - | chr3_2:90985900-90985919 | None:intergenic | 30.0% | |
| CAGAATATTCACAAAAGGAA+TGG | - | chr3_2:90985902-90985921 | None:intergenic | 30.0% | |
| !! | AGATCAGATTATTTCTGCTT+TGG | + | chr3_2:90985972-90985991 | Msa0437030:intron | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | - | chr3_2:90986076-90986095 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | + | chr3_2:90986074-90986093 | Msa0437030:intron | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | + | chr3_2:90986146-90986165 | Msa0437030:intron | 30.0% |
| TTCCAAAAAAGCTGAATTCT+TGG | - | chr3_2:90986300-90986319 | None:intergenic | 30.0% | |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | + | chr3_2:90986299-90986318 | Msa0437030:intron | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | + | chr3_2:90986334-90986353 | Msa0437030:intron | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | + | chr3_2:90986354-90986373 | Msa0437030:intron | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | + | chr3_2:90986355-90986374 | Msa0437030:intron | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | + | chr3_2:90986356-90986375 | Msa0437030:intron | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | + | chr3_2:90986357-90986376 | Msa0437030:intron | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | + | chr3_2:90986429-90986448 | Msa0437030:intron | 30.0% | |
| AAGAGTTATGTTAGGAAGAA+AGG | + | chr3_2:90986530-90986549 | Msa0437030:intron | 30.0% | |
| !! | TTGTAGCTGATTTTAAATCC+AGG | + | chr3_2:90986615-90986634 | Msa0437030:CDS | 30.0% |
| GAAGTTGACAAAATATCTTG+AGG | + | chr3_2:90986796-90986815 | Msa0437030:intron | 30.0% | |
| TTGACAAAATATCTTGAGGA+GGG | + | chr3_2:90986800-90986819 | Msa0437030:intron | 30.0% | |
| ACAAAAAAAATATGGGAGCA+TGG | - | chr3_2:90986902-90986921 | None:intergenic | 30.0% | |
| !! | AATGTTTGATTTTGTTGCGT+TGG | + | chr3_2:90986954-90986973 | Msa0437030:intron | 30.0% |
| TGCTCCAAAGAAGAATAAAA+AGG | + | chr3_2:90987243-90987262 | Msa0437030:intron | 30.0% | |
| GTAAGAAAATGTTCAAACTG+TGG | + | chr3_2:90987277-90987296 | Msa0437030:intron | 30.0% | |
| !!! | CTTTACTGATTTTGGTACAC+CGG | + | chr3_2:90984852-90984871 | Msa0437030:CDS | 35.0% |
| GAAACATATCCGATCATTGT+TGG | + | chr3_2:90984913-90984932 | Msa0437030:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | + | chr3_2:90985015-90985034 | Msa0437030:intron | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | + | chr3_2:90985096-90985115 | Msa0437030:CDS | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | + | chr3_2:90985261-90985280 | Msa0437030:CDS | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | + | chr3_2:90985307-90985326 | Msa0437030:CDS | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | + | chr3_2:90985314-90985333 | Msa0437030:CDS | 35.0% | |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | + | chr3_2:90985385-90985404 | Msa0437030:CDS | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | + | chr3_2:90985400-90985419 | Msa0437030:CDS | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | + | chr3_2:90985414-90985433 | Msa0437030:CDS | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | + | chr3_2:90985430-90985449 | Msa0437030:CDS | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | - | chr3_2:90985580-90985599 | None:intergenic | 35.0% |
| TGCATTTACACCCTGTTTAT+CGG | + | chr3_2:90985649-90985668 | Msa0437030:CDS | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | - | chr3_2:90985662-90985681 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | - | chr3_2:90985663-90985682 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | + | chr3_2:90985662-90985681 | Msa0437030:CDS | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | - | chr3_2:90985682-90985701 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | + | chr3_2:90985684-90985703 | Msa0437030:CDS | 35.0% | |
| ! | ATTGATGGTCTTCAGTCATA+CGG | + | chr3_2:90985699-90985718 | Msa0437030:CDS | 35.0% |
| ! | TCATATAATGGGATACATGG+TGG | + | chr3_2:90985734-90985753 | Msa0437030:intron | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | + | chr3_2:90985825-90985844 | Msa0437030:intron | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | - | chr3_2:90985907-90985926 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | + | chr3_2:90985942-90985961 | Msa0437030:intron | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | + | chr3_2:90986085-90986104 | Msa0437030:intron | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | + | chr3_2:90986145-90986164 | Msa0437030:intron | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | - | chr3_2:90986150-90986169 | None:intergenic | 35.0% | |
| !!! | TGCCAAGAATTCAGCTTTTT+TGG | + | chr3_2:90986295-90986314 | Msa0437030:intron | 35.0% |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | + | chr3_2:90986358-90986377 | Msa0437030:intron | 35.0% |
| ATGGAATTGAGAACAATCCA+TGG | + | chr3_2:90986396-90986415 | Msa0437030:intron | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | + | chr3_2:90986397-90986416 | Msa0437030:intron | 35.0% | |
| !!! | TCATATGTTTTGGTAACCCA+TGG | - | chr3_2:90986416-90986435 | None:intergenic | 35.0% |
| !! | ATTTCTGCACAATTTTGACG+AGG | + | chr3_2:90986565-90986584 | Msa0437030:intron | 35.0% |
| GTGAAGGAAAAAGAAGTGAA+TGG | + | chr3_2:90986758-90986777 | Msa0437030:intron | 35.0% | |
| GTTGACAAAATATCTTGAGG+AGG | + | chr3_2:90986799-90986818 | Msa0437030:intron | 35.0% | |
| CGCAACAAAATCAAACATTC+TGG | - | chr3_2:90986953-90986972 | None:intergenic | 35.0% | |
| !! | GAAGATTGGTTTCTTGAATG+TGG | + | chr3_2:90986988-90987007 | Msa0437030:intron | 35.0% |
| ! | TTCTTGAATGTGGACTATTG+TGG | + | chr3_2:90986998-90987017 | Msa0437030:intron | 35.0% |
| ! | TCTTGAATGTGGACTATTGT+GGG | + | chr3_2:90986999-90987018 | Msa0437030:intron | 35.0% |
| ! | GGAAGTAGATTCTAAGTTGA+TGG | + | chr3_2:90987021-90987040 | Msa0437030:intron | 35.0% |
| TGGATGACATACAAAAGCTT+CGG | + | chr3_2:90987131-90987150 | Msa0437030:intron | 35.0% | |
| CAGTAACAATTGGAACTTCA+GGG | - | chr3_2:90987171-90987190 | None:intergenic | 35.0% | |
| GTTGAGTTTCCAGTAACAAT+TGG | - | chr3_2:90987181-90987200 | None:intergenic | 35.0% | |
| TGTTACTGGAAACTCAACAA+TGG | + | chr3_2:90987183-90987202 | Msa0437030:intron | 35.0% | |
| ! | GGTGCCTTTTTATTCTTCTT+TGG | - | chr3_2:90987250-90987269 | None:intergenic | 35.0% |
| ! | CAGCACATGTCTTTTTCTTT+GGG | - | chr3_2:90987618-90987637 | None:intergenic | 35.0% |
| CGGTGTACCAAAATCAGTAA+AGG | - | chr3_2:90984854-90984873 | None:intergenic | 40.0% | |
| GTAGAACCGTAATCATGTTC+CGG | - | chr3_2:90984874-90984893 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | + | chr3_2:90984873-90984892 | Msa0437030:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | + | chr3_2:90984982-90985001 | Msa0437030:CDS | 40.0% |
| GATGAGCGATATGAAGAAAC+TGG | + | chr3_2:90985039-90985058 | Msa0437030:CDS | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | + | chr3_2:90985060-90985079 | Msa0437030:CDS | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | + | chr3_2:90985063-90985082 | Msa0437030:CDS | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | + | chr3_2:90985087-90985106 | Msa0437030:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | + | chr3_2:90985108-90985127 | Msa0437030:CDS | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | + | chr3_2:90985132-90985151 | Msa0437030:CDS | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | + | chr3_2:90985141-90985160 | Msa0437030:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr3_2:90985192-90985211 | Msa0437030:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr3_2:90985192-90985211 | Msa0437030:CDS | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | + | chr3_2:90985266-90985285 | Msa0437030:CDS | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | + | chr3_2:90985272-90985291 | Msa0437030:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | + | chr3_2:90985277-90985296 | Msa0437030:CDS | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | + | chr3_2:90985453-90985472 | Msa0437030:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | + | chr3_2:90985454-90985473 | Msa0437030:CDS | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | - | chr3_2:90985563-90985582 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | + | chr3_2:90985563-90985582 | Msa0437030:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | + | chr3_2:90985564-90985583 | Msa0437030:CDS | 40.0% | |
| !! | TGTAAATGCACAGCATTGGT+TGG | - | chr3_2:90985639-90985658 | None:intergenic | 40.0% |
| TTTCTTAGTGAACCCAACAC+CGG | - | chr3_2:90985778-90985797 | None:intergenic | 40.0% | |
| TTTCAAACGTTCGTCATCAG+TGG | - | chr3_2:90985925-90985944 | None:intergenic | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | + | chr3_2:90985980-90985999 | Msa0437030:intron | 40.0% |
| GAACAAATACCACTATCCGT+TGG | + | chr3_2:90986028-90986047 | Msa0437030:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | - | chr3_2:90986040-90986059 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | + | chr3_2:90986041-90986060 | Msa0437030:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | - | chr3_2:90986182-90986201 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | + | chr3_2:90986179-90986198 | Msa0437030:intron | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | + | chr3_2:90986268-90986287 | Msa0437030:intron | 40.0% | |
| !! | AATTTTGACGAGGCAATGAG+AGG | + | chr3_2:90986575-90986594 | Msa0437030:intron | 40.0% |
| !! | CAGCAATTCAGTGTTTTTGC+AGG | + | chr3_2:90986855-90986874 | Msa0437030:intron | 40.0% |
| TGCAGGAAATTTGAATCTCG+AGG | + | chr3_2:90986872-90986891 | Msa0437030:intron | 40.0% | |
| GCAGGAAATTTGAATCTCGA+GGG | + | chr3_2:90986873-90986892 | Msa0437030:intron | 40.0% | |
| CAGGAAATTTGAATCTCGAG+GGG | + | chr3_2:90986874-90986893 | Msa0437030:intron | 40.0% | |
| TTTGTTGCGTTGGACGAAAA+AGG | + | chr3_2:90986964-90986983 | Msa0437030:intron | 40.0% | |
| ! | CTTGAATGTGGACTATTGTG+GGG | + | chr3_2:90987000-90987019 | Msa0437030:intron | 40.0% |
| TTGATGGAGATTGCTCGATA+TGG | + | chr3_2:90987037-90987056 | Msa0437030:intron | 40.0% | |
| ! | AGCATACAAGCTACCCTTTT+TGG | - | chr3_2:90987104-90987123 | None:intergenic | 40.0% |
| GGATGACATACAAAAGCTTC+GGG | + | chr3_2:90987132-90987151 | Msa0437030:intron | 40.0% | |
| CCAGTAACAATTGGAACTTC+AGG | - | chr3_2:90987172-90987191 | None:intergenic | 40.0% | |
| CCTGAAGTTCCAATTGTTAC+TGG | + | chr3_2:90987169-90987188 | Msa0437030:intron | 40.0% | |
| AAAAAGACATTCAGTGTCCG+CGG | - | chr3_2:90987332-90987351 | None:intergenic | 40.0% | |
| ! | GCAGCACATGTCTTTTTCTT+TGG | - | chr3_2:90987619-90987638 | None:intergenic | 40.0% |
| GGTACACCGGAACATGATTA+CGG | + | chr3_2:90984865-90984884 | Msa0437030:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | + | chr3_2:90984879-90984898 | Msa0437030:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | + | chr3_2:90984919-90984938 | Msa0437030:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | + | chr3_2:90985072-90985091 | Msa0437030:CDS | 45.0% |
| AGTCAAGGTGATGAAGGTGA+AGG | + | chr3_2:90985147-90985166 | Msa0437030:CDS | 45.0% | |
| GGTGAAGGTGATGAAAGTGA+AGG | + | chr3_2:90985162-90985181 | Msa0437030:CDS | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | + | chr3_2:90985177-90985196 | Msa0437030:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr3_2:90985168-90985187 | Msa0437030:CDS | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | + | chr3_2:90985222-90985241 | Msa0437030:CDS | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | + | chr3_2:90985452-90985471 | Msa0437030:CDS | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | - | chr3_2:90985626-90985645 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | - | chr3_2:90985643-90985662 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | - | chr3_2:90985777-90985796 | None:intergenic | 45.0% | |
| AAAGGAATGGGGATCAGTTG+AGG | - | chr3_2:90985889-90985908 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | - | chr3_2:90986047-90986066 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | + | chr3_2:90986091-90986110 | Msa0437030:intron | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | + | chr3_2:90986185-90986204 | Msa0437030:intron | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | + | chr3_2:90986196-90986215 | Msa0437030:intron | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | + | chr3_2:90986208-90986227 | Msa0437030:intron | 45.0% | |
| TACGTGCGTGACGATTTCTT+TGG | + | chr3_2:90986461-90986480 | Msa0437030:intron | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | + | chr3_2:90986682-90986701 | Msa0437030:CDS | 45.0% | |
| TGGACGAAAAAGGCGAAGAT+TGG | + | chr3_2:90986974-90986993 | Msa0437030:intron | 45.0% | |
| !! | TTGCAGGGAAGTGTCCAAAA+AGG | + | chr3_2:90987087-90987106 | Msa0437030:intron | 45.0% |
| !! | TGCAGGGAAGTGTCCAAAAA+GGG | + | chr3_2:90987088-90987107 | Msa0437030:intron | 45.0% |
| ! | TAGCTTGTATGCTGATGTGC+TGG | + | chr3_2:90987111-90987130 | Msa0437030:intron | 45.0% |
| TGATGCCAGAAAATGTTCCG+CGG | + | chr3_2:90987312-90987331 | Msa0437030:intron | 45.0% | |
| CAAAGGGAGGCAAATCAAAG+AGG | + | chr3_2:90987398-90987417 | Msa0437030:intron | 45.0% | |
| AGAAAGATGCTCAGTGCTTG+CGG | - | chr3_2:90987434-90987453 | None:intergenic | 45.0% | |
| !! | CAAGCACTGAGCATCTTTCT+GGG | + | chr3_2:90987434-90987453 | Msa0437030:CDS | 45.0% |
| TAGCTAGCATGCTGAGACAT+GGG | - | chr3_2:90987664-90987683 | None:intergenic | 45.0% | |
| TTAGCTAGCATGCTGAGACA+TGG | - | chr3_2:90987665-90987684 | None:intergenic | 45.0% | |
| CCACCACTCCCAACAATGAT+CGG | - | chr3_2:90984925-90984944 | None:intergenic | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | + | chr3_2:90985535-90985554 | Msa0437030:CDS | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | - | chr3_2:90985633-90985652 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | + | chr3_2:90985744-90985763 | Msa0437030:intron | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | + | chr3_2:90986195-90986214 | Msa0437030:intron | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | + | chr3_2:90986211-90986230 | Msa0437030:intron | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | - | chr3_2:90986242-90986261 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | + | chr3_2:90986364-90986383 | Msa0437030:intron | 50.0% |
| GTGCGTGACGATTTCTTTGG+TGG | + | chr3_2:90986464-90986483 | Msa0437030:intron | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | - | chr3_2:90986648-90986667 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | - | chr3_2:90986649-90986668 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | + | chr3_2:90986742-90986761 | Msa0437030:CDS | 50.0% |
| CTGGCAATGGATCACGTATG+TGG | - | chr3_2:90987210-90987229 | None:intergenic | 50.0% | |
| CCTTTGCACTTCACTGGCAA+TGG | - | chr3_2:90987223-90987242 | None:intergenic | 50.0% | |
| CCATTGCCAGTGAAGTGCAA+AGG | + | chr3_2:90987220-90987239 | Msa0437030:intron | 50.0% | |
| ! | AGTGTCCGCGGAACATTTTC+TGG | - | chr3_2:90987320-90987339 | None:intergenic | 50.0% |
| TCCCACGTCTCTTTGGCTAT+CGG | - | chr3_2:90987371-90987390 | None:intergenic | 50.0% | |
| ATCCTTCTCCCACGTCTCTT+TGG | - | chr3_2:90987378-90987397 | None:intergenic | 50.0% | |
| AGACGTGGGAGAAGGATCAA+AGG | + | chr3_2:90987381-90987400 | Msa0437030:intron | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | + | chr3_2:90987382-90987401 | Msa0437030:intron | 50.0% | |
| !! | GCAAGCACTGAGCATCTTTC+TGG | + | chr3_2:90987433-90987452 | Msa0437030:CDS | 50.0% |
| TGGCTAGCATGCTGAGACAT+TGG | - | chr3_2:90987460-90987479 | None:intergenic | 50.0% | |
| CATGCTAGCCAGAAAGACGT+GGG | + | chr3_2:90987469-90987488 | Msa0437030:CDS | 50.0% | |
| ATCCTTCTCCCACGTCTTTC+TGG | - | chr3_2:90987480-90987499 | None:intergenic | 50.0% | |
| AGACGTGGGAGAAGGATCAA+AGG | + | chr3_2:90987381-90987400 | Msa0437030:intron | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | + | chr3_2:90987382-90987401 | Msa0437030:intron | 50.0% | |
| TGGCTAGCATGCTGAGACAT+GGG | - | chr3_2:90987460-90987479 | None:intergenic | 50.0% | |
| CATGCTAGCCAGAAAGACGT+GGG | + | chr3_2:90987469-90987488 | Msa0437030:CDS | 50.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | + | chr3_2:90984922-90984941 | Msa0437030:CDS | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | - | chr3_2:90985552-90985571 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | + | chr3_2:90985743-90985762 | Msa0437030:intron | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | + | chr3_2:90985747-90985766 | Msa0437030:intron | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | + | chr3_2:90985756-90985775 | Msa0437030:intron | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | + | chr3_2:90985762-90985781 | Msa0437030:intron | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | + | chr3_2:90985763-90985782 | Msa0437030:intron | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | + | chr3_2:90986199-90986218 | Msa0437030:intron | 55.0% |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | + | chr3_2:90986369-90986388 | Msa0437030:intron | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | + | chr3_2:90986370-90986389 | Msa0437030:intron | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | + | chr3_2:90986377-90986396 | Msa0437030:intron | 55.0% |
| CAGCACAGGGGATGAAAACC+TGG | - | chr3_2:90986636-90986655 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | - | chr3_2:90986650-90986669 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | + | chr3_2:90986664-90986683 | Msa0437030:CDS | 55.0% | |
| ! | GGAGCACCTTTGCACTTCAC+TGG | - | chr3_2:90987229-90987248 | None:intergenic | 55.0% |
| TGGCTATCGGGCTGAGACAT+GGG | - | chr3_2:90987358-90987377 | None:intergenic | 55.0% | |
| TTGGCTATCGGGCTGAGACA+TGG | - | chr3_2:90987359-90987378 | None:intergenic | 55.0% | |
| CCCACGTCTCTTTGGCTATC+GGG | - | chr3_2:90987370-90987389 | None:intergenic | 55.0% | |
| CCCGATAGCCAAAGAGACGT+GGG | + | chr3_2:90987367-90987386 | Msa0437030:intron | 55.0% | |
| AGCCAAAGAGACGTGGGAGA+AGG | + | chr3_2:90987373-90987392 | Msa0437030:intron | 55.0% | |
| GTGGGAGAAGGATCAAAGGG+AGG | + | chr3_2:90987385-90987404 | Msa0437030:intron | 55.0% | |
| GCATGCTAGCCAGAAAGACG+TGG | + | chr3_2:90987468-90987487 | Msa0437030:CDS | 55.0% | |
| AGCCAGAAAGACGTGGGAGA+AGG | + | chr3_2:90987475-90987494 | Msa0437030:CDS | 55.0% | |
| CTGGCTAGCATGCTGAGACA+TGG | - | chr3_2:90987461-90987480 | None:intergenic | 55.0% | |
| GCATGCTAGCCAGAAAGACG+TGG | + | chr3_2:90987468-90987487 | Msa0437030:CDS | 55.0% | |
| ATCCTGCTCCCACGTCTTTC+TGG | - | chr3_2:90987582-90987601 | None:intergenic | 55.0% | |
| AGACGTGGGAGCAGGATCAA+AGG | + | chr3_2:90987585-90987604 | Msa0437030:CDS | 55.0% | |
| GACGTGGGAGCAGGATCAAA+GGG | + | chr3_2:90987586-90987605 | Msa0437030:CDS | 55.0% | |
| GCCCGATAGCCAAAGAGACG+TGG | + | chr3_2:90987366-90987385 | Msa0437030:intron | 60.0% | |
| AGCCAGAAAGACGTGGGAGC+AGG | + | chr3_2:90987577-90987596 | Msa0437030:CDS | 60.0% | |
| GTGGGAGCAGGATCAAAGGG+AGG | + | chr3_2:90987589-90987608 | Msa0437030:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 90984832 | 90987684 | 90984832 | ID=Msa0437030;Name=Msa0437030 |
| chr3_2 | mRNA | 90984832 | 90987684 | 90984832 | ID=Msa0437030-mRNA-1;Parent=Msa0437030;Name=Msa0437030-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|0.83|0.2|0.16|6|0|436 |
| chr3_2 | exon | 90984832 | 90985003 | 90984832 | ID=Msa0437030-mRNA-1:exon:27150;Parent=Msa0437030-mRNA-1 |
| chr3_2 | exon | 90985037 | 90985243 | 90985037 | ID=Msa0437030-mRNA-1:exon:27151;Parent=Msa0437030-mRNA-1 |
| chr3_2 | exon | 90985259 | 90985502 | 90985259 | ID=Msa0437030-mRNA-1:exon:27152;Parent=Msa0437030-mRNA-1 |
| chr3_2 | exon | 90985512 | 90985752 | 90985512 | ID=Msa0437030-mRNA-1:exon:27153;Parent=Msa0437030-mRNA-1 |
| chr3_2 | exon | 90986587 | 90986772 | 90986587 | ID=Msa0437030-mRNA-1:exon:27154;Parent=Msa0437030-mRNA-1 |
| chr3_2 | exon | 90987424 | 90987684 | 90987424 | ID=Msa0437030-mRNA-1:exon:27155;Parent=Msa0437030-mRNA-1 |
| chr3_2 | CDS | 90984832 | 90985003 | 90984832 | ID=Msa0437030-mRNA-1:cds;Parent=Msa0437030-mRNA-1 |
| chr3_2 | CDS | 90985037 | 90985243 | 90985037 | ID=Msa0437030-mRNA-1:cds;Parent=Msa0437030-mRNA-1 |
| chr3_2 | CDS | 90985259 | 90985502 | 90985259 | ID=Msa0437030-mRNA-1:cds;Parent=Msa0437030-mRNA-1 |
| chr3_2 | CDS | 90985512 | 90985752 | 90985512 | ID=Msa0437030-mRNA-1:cds;Parent=Msa0437030-mRNA-1 |
| chr3_2 | CDS | 90986587 | 90986772 | 90986587 | ID=Msa0437030-mRNA-1:cds;Parent=Msa0437030-mRNA-1 |
| chr3_2 | CDS | 90987424 | 90987684 | 90987424 | ID=Msa0437030-mRNA-1:cds;Parent=Msa0437030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
