Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0442640 | XP_003598025.2 | 75.191 | 524 | 111 | 5 | 1 | 507 | 20 | 541 | 0.0 | 783 |
Msa0442640 | XP_003598025.2 | 77.138 | 538 | 104 | 6 | 504 | 1025 | 8 | 542 | 0.0 | 808 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0442640 | sp|Q8L3W1|VRN1_ARATH | 42.991 | 107 | 61 | 0 | 260 | 366 | 6 | 112 | 2.27e-22 | 103 |
Msa0442640 | sp|Q8L3W1|VRN1_ARATH | 43.678 | 87 | 49 | 0 | 782 | 868 | 6 | 92 | 5.40e-17 | 87.0 |
Msa0442640 | sp|Q8L3W1|VRN1_ARATH | 38.384 | 99 | 57 | 1 | 539 | 633 | 6 | 104 | 2.17e-16 | 85.5 |
Msa0442640 | sp|Q8L3W1|VRN1_ARATH | 38.542 | 96 | 58 | 1 | 23 | 118 | 6 | 100 | 9.01e-15 | 80.5 |
Msa0442640 | sp|Q8L3W1|VRN1_ARATH | 34.266 | 143 | 82 | 5 | 888 | 1024 | 205 | 341 | 3.09e-11 | 69.7 |
Msa0442640 | sp|Q8L3W1|VRN1_ARATH | 43.119 | 109 | 54 | 3 | 133 | 236 | 229 | 334 | 6.03e-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0442640 | G7IYE4 | 75.191 | 524 | 111 | 5 | 1 | 507 | 20 | 541 | 0.0 | 783 |
Msa0442640 | G7IYE4 | 77.138 | 538 | 104 | 6 | 504 | 1025 | 8 | 542 | 0.0 | 808 |
Gene ID | Type | Classification |
---|---|---|
Msa0442640 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0442640 | MtrunA17_Chr3g0077361 | 74.432 | 528 | 101 | 6 | 504 | 1025 | 8 | 507 | 0.0 | 756 |
Msa0442640 | MtrunA17_Chr3g0077361 | 70.713 | 519 | 108 | 5 | 1 | 507 | 20 | 506 | 0.0 | 718 |
Msa0442640 | MtrunA17_Chr3g0077411 | 68.668 | 533 | 133 | 6 | 517 | 1025 | 1 | 523 | 0.0 | 702 |
Msa0442640 | MtrunA17_Chr3g0077411 | 62.738 | 526 | 161 | 7 | 1 | 501 | 1 | 516 | 0.0 | 620 |
Msa0442640 | MtrunA17_Chr3g0077411 | 47.710 | 262 | 97 | 4 | 18 | 239 | 257 | 518 | 4.64e-64 | 226 |
Msa0442640 | MtrunA17_Chr4g0009491 | 72.562 | 441 | 87 | 3 | 37 | 462 | 11 | 432 | 0.0 | 637 |
Msa0442640 | MtrunA17_Chr4g0009491 | 63.364 | 434 | 124 | 4 | 553 | 971 | 11 | 424 | 5.96e-176 | 520 |
Msa0442640 | MtrunA17_Chr4g0009491 | 44.632 | 475 | 175 | 7 | 274 | 716 | 11 | 429 | 3.85e-112 | 353 |
Msa0442640 | MtrunA17_Chr4g0009491 | 52.113 | 213 | 70 | 3 | 796 | 998 | 11 | 201 | 3.87e-57 | 204 |
Msa0442640 | MtrunA17_Chr4g0009491 | 50.725 | 207 | 70 | 2 | 18 | 192 | 220 | 426 | 3.64e-55 | 198 |
Msa0442640 | MtrunA17_Chr3g0077381 | 71.332 | 443 | 81 | 5 | 37 | 462 | 34 | 447 | 0.0 | 615 |
Msa0442640 | MtrunA17_Chr3g0077381 | 63.448 | 435 | 114 | 6 | 553 | 971 | 34 | 439 | 3.50e-172 | 511 |
Msa0442640 | MtrunA17_Chr3g0077381 | 44.304 | 474 | 170 | 7 | 274 | 716 | 34 | 444 | 3.58e-110 | 349 |
Msa0442640 | MtrunA17_Chr3g0077381 | 48.069 | 233 | 65 | 5 | 796 | 1016 | 34 | 222 | 4.03e-51 | 187 |
Msa0442640 | MtrunA17_Chr3g0077381 | 48.309 | 207 | 68 | 3 | 18 | 192 | 242 | 441 | 7.61e-50 | 183 |
Msa0442640 | MtrunA17_Chr3g0077461 | 63.333 | 480 | 126 | 9 | 554 | 1017 | 22 | 467 | 0.0 | 570 |
Msa0442640 | MtrunA17_Chr3g0077461 | 56.250 | 480 | 159 | 11 | 38 | 500 | 22 | 467 | 6.90e-162 | 485 |
Msa0442640 | MtrunA17_Chr3g0077461 | 45.924 | 503 | 192 | 11 | 275 | 756 | 22 | 465 | 6.99e-122 | 380 |
Msa0442640 | MtrunA17_Chr3g0077461 | 47.917 | 240 | 102 | 7 | 18 | 237 | 232 | 468 | 5.61e-52 | 190 |
Msa0442640 | MtrunA17_Chr5g0429931 | 66.109 | 239 | 71 | 1 | 797 | 1025 | 10 | 248 | 3.37e-102 | 320 |
Msa0442640 | MtrunA17_Chr5g0429931 | 64.831 | 236 | 78 | 1 | 275 | 505 | 10 | 245 | 5.25e-94 | 298 |
Msa0442640 | MtrunA17_Chr5g0429931 | 54.783 | 230 | 72 | 2 | 38 | 235 | 10 | 239 | 5.66e-69 | 230 |
Msa0442640 | MtrunA17_Chr5g0429931 | 55.844 | 231 | 74 | 4 | 554 | 757 | 10 | 239 | 1.28e-67 | 227 |
Msa0442640 | MtrunA17_Chr3g0077451 | 64.730 | 241 | 64 | 3 | 796 | 1025 | 10 | 240 | 7.16e-100 | 314 |
Msa0442640 | MtrunA17_Chr3g0077451 | 63.136 | 236 | 71 | 3 | 274 | 503 | 10 | 235 | 9.79e-91 | 289 |
Msa0442640 | MtrunA17_Chr3g0077451 | 56.757 | 222 | 73 | 3 | 37 | 235 | 10 | 231 | 3.44e-69 | 231 |
Msa0442640 | MtrunA17_Chr3g0077451 | 56.951 | 223 | 77 | 5 | 553 | 757 | 10 | 231 | 2.48e-67 | 226 |
Msa0442640 | MtrunA17_Chr3g0077431 | 62.559 | 211 | 58 | 3 | 826 | 1025 | 1 | 201 | 1.30e-81 | 263 |
Msa0442640 | MtrunA17_Chr3g0077431 | 59.709 | 206 | 67 | 3 | 304 | 503 | 1 | 196 | 1.19e-71 | 236 |
Msa0442640 | MtrunA17_Chr3g0077431 | 52.604 | 192 | 68 | 3 | 67 | 235 | 1 | 192 | 5.21e-51 | 178 |
Msa0442640 | MtrunA17_Chr3g0077431 | 52.850 | 193 | 72 | 5 | 583 | 757 | 1 | 192 | 2.54e-49 | 173 |
Msa0442640 | MtrunA17_Chr3g0077421 | 62.381 | 210 | 57 | 3 | 826 | 1023 | 1 | 200 | 2.31e-78 | 254 |
Msa0442640 | MtrunA17_Chr3g0077421 | 58.654 | 208 | 69 | 3 | 304 | 504 | 1 | 198 | 5.25e-69 | 229 |
Msa0442640 | MtrunA17_Chr3g0077421 | 52.850 | 193 | 67 | 3 | 67 | 235 | 1 | 193 | 1.34e-49 | 174 |
Msa0442640 | MtrunA17_Chr3g0077421 | 50.000 | 194 | 77 | 5 | 583 | 757 | 1 | 193 | 2.12e-44 | 159 |
Msa0442640 | MtrunA17_Chr3g0077441 | 62.381 | 210 | 57 | 3 | 826 | 1023 | 1 | 200 | 2.31e-78 | 254 |
Msa0442640 | MtrunA17_Chr3g0077441 | 58.654 | 208 | 69 | 3 | 304 | 504 | 1 | 198 | 5.25e-69 | 229 |
Msa0442640 | MtrunA17_Chr3g0077441 | 52.850 | 193 | 67 | 3 | 67 | 235 | 1 | 193 | 1.34e-49 | 174 |
Msa0442640 | MtrunA17_Chr3g0077441 | 50.000 | 194 | 77 | 5 | 583 | 757 | 1 | 193 | 2.12e-44 | 159 |
Msa0442640 | MtrunA17_Chr3g0131891 | 29.167 | 288 | 158 | 7 | 259 | 502 | 18 | 303 | 8.76e-26 | 109 |
Msa0442640 | MtrunA17_Chr3g0131891 | 24.913 | 289 | 170 | 5 | 781 | 1022 | 18 | 306 | 2.60e-18 | 87.4 |
Msa0442640 | MtrunA17_Chr3g0131891 | 25.532 | 282 | 140 | 9 | 532 | 746 | 12 | 290 | 5.92e-16 | 80.5 |
Msa0442640 | MtrunA17_Chr3g0131891 | 23.214 | 280 | 144 | 6 | 16 | 225 | 12 | 290 | 4.00e-12 | 68.9 |
Msa0442640 | MtrunA17_Chr7g0233561 | 28.289 | 304 | 164 | 10 | 253 | 502 | 9 | 312 | 3.62e-25 | 107 |
Msa0442640 | MtrunA17_Chr7g0233561 | 26.198 | 313 | 168 | 11 | 771 | 1022 | 5 | 315 | 7.50e-20 | 92.0 |
Msa0442640 | MtrunA17_Chr7g0233561 | 23.891 | 293 | 142 | 8 | 22 | 234 | 17 | 308 | 2.98e-13 | 72.4 |
Msa0442640 | MtrunA17_Chr7g0233561 | 29.310 | 116 | 74 | 2 | 538 | 645 | 17 | 132 | 8.12e-12 | 67.8 |
Msa0442640 | MtrunA17_Chr1g0162441 | 44.545 | 110 | 61 | 0 | 260 | 369 | 7 | 116 | 5.07e-25 | 109 |
Msa0442640 | MtrunA17_Chr1g0162441 | 42.982 | 114 | 59 | 3 | 782 | 895 | 7 | 114 | 3.53e-21 | 97.8 |
Msa0442640 | MtrunA17_Chr1g0162441 | 40.367 | 109 | 60 | 2 | 539 | 642 | 7 | 115 | 4.06e-20 | 94.4 |
Msa0442640 | MtrunA17_Chr1g0162441 | 39.316 | 117 | 68 | 2 | 23 | 139 | 7 | 120 | 1.40e-19 | 92.8 |
Msa0442640 | MtrunA17_Chr1g0162441 | 35.659 | 129 | 72 | 4 | 898 | 1019 | 268 | 392 | 5.16e-14 | 75.5 |
Msa0442640 | MtrunA17_Chr1g0162441 | 43.119 | 109 | 53 | 4 | 133 | 235 | 284 | 389 | 1.92e-11 | 67.4 |
Msa0442640 | MtrunA17_Chr8g0390841 | 28.808 | 302 | 147 | 12 | 260 | 502 | 39 | 331 | 3.51e-21 | 98.6 |
Msa0442640 | MtrunA17_Chr8g0390841 | 26.073 | 303 | 149 | 8 | 782 | 1019 | 39 | 331 | 7.59e-21 | 97.8 |
Msa0442640 | MtrunA17_Chr8g0390841 | 33.019 | 106 | 70 | 1 | 23 | 128 | 39 | 143 | 3.99e-11 | 67.0 |
Msa0442640 | MtrunA17_Chr4g0033961 | 37.500 | 136 | 73 | 2 | 257 | 392 | 3 | 126 | 4.53e-21 | 97.4 |
Msa0442640 | MtrunA17_Chr4g0033961 | 35.652 | 115 | 67 | 2 | 779 | 892 | 3 | 111 | 3.72e-17 | 85.5 |
Msa0442640 | MtrunA17_Chr4g0033961 | 36.283 | 113 | 71 | 1 | 20 | 131 | 3 | 115 | 1.46e-16 | 83.6 |
Msa0442640 | MtrunA17_Chr4g0033961 | 34.545 | 110 | 68 | 1 | 536 | 641 | 3 | 112 | 1.94e-15 | 80.1 |
Msa0442640 | MtrunA17_Chr4g0033961 | 36.434 | 129 | 71 | 4 | 898 | 1019 | 264 | 388 | 4.27e-14 | 75.9 |
Msa0442640 | MtrunA17_Chr4g0033961 | 43.103 | 116 | 55 | 5 | 129 | 236 | 274 | 386 | 4.72e-12 | 69.3 |
Msa0442640 | MtrunA17_Chr3g0103181 | 27.437 | 277 | 159 | 7 | 259 | 501 | 11 | 279 | 8.05e-21 | 94.0 |
Msa0442640 | MtrunA17_Chr3g0103181 | 25.899 | 278 | 157 | 7 | 781 | 1018 | 11 | 279 | 1.06e-17 | 84.7 |
Msa0442640 | MtrunA17_Chr3g0103181 | 37.500 | 88 | 53 | 1 | 22 | 109 | 11 | 96 | 2.21e-12 | 68.9 |
Msa0442640 | MtrunA17_Chr3g0103181 | 38.000 | 100 | 56 | 2 | 538 | 633 | 11 | 108 | 2.61e-12 | 68.6 |
Msa0442640 | MtrunA17_Chr1g0162411 | 46.667 | 90 | 48 | 0 | 260 | 349 | 7 | 96 | 1.20e-20 | 96.3 |
Msa0442640 | MtrunA17_Chr1g0162411 | 41.667 | 96 | 55 | 1 | 782 | 877 | 7 | 101 | 3.31e-18 | 89.0 |
Msa0442640 | MtrunA17_Chr1g0162411 | 40.777 | 103 | 60 | 1 | 23 | 125 | 7 | 108 | 4.45e-18 | 88.6 |
Msa0442640 | MtrunA17_Chr1g0162411 | 35.577 | 104 | 63 | 1 | 539 | 638 | 7 | 110 | 6.14e-15 | 78.6 |
Msa0442640 | MtrunA17_Chr7g0233521 | 27.985 | 268 | 146 | 6 | 276 | 502 | 2 | 263 | 4.35e-20 | 91.7 |
Msa0442640 | MtrunA17_Chr7g0233521 | 26.374 | 273 | 145 | 7 | 798 | 1022 | 2 | 266 | 8.47e-18 | 85.1 |
Msa0442640 | MtrunA17_Chr7g0233521 | 32.558 | 86 | 54 | 1 | 555 | 636 | 2 | 87 | 1.17e-11 | 66.6 |
Msa0442640 | MtrunA17_Chr3g0103171 | 26.966 | 267 | 149 | 7 | 275 | 501 | 5 | 265 | 4.39e-20 | 91.3 |
Msa0442640 | MtrunA17_Chr3g0103171 | 25.670 | 261 | 155 | 4 | 797 | 1018 | 5 | 265 | 1.10e-18 | 87.4 |
Msa0442640 | MtrunA17_Chr3g0103171 | 40.476 | 84 | 46 | 1 | 554 | 633 | 5 | 88 | 9.33e-13 | 69.7 |
Msa0442640 | MtrunA17_Chr3g0103171 | 40.278 | 72 | 43 | 0 | 38 | 109 | 5 | 76 | 4.20e-12 | 67.8 |
Msa0442640 | MtrunA17_Chr1g0163071 | 27.797 | 295 | 136 | 9 | 276 | 502 | 2 | 287 | 5.55e-19 | 89.0 |
Msa0442640 | MtrunA17_Chr7g0233531 | 28.517 | 263 | 151 | 8 | 276 | 502 | 2 | 263 | 1.14e-18 | 87.4 |
Msa0442640 | MtrunA17_Chr7g0233531 | 24.818 | 274 | 148 | 8 | 798 | 1022 | 2 | 266 | 2.46e-13 | 71.6 |
Msa0442640 | MtrunA17_Chr1g0208771 | 24.104 | 502 | 295 | 18 | 38 | 505 | 12 | 461 | 1.39e-18 | 90.1 |
Msa0442640 | MtrunA17_Chr5g0421921 | 40.187 | 107 | 63 | 1 | 396 | 502 | 3 | 108 | 2.03e-18 | 82.0 |
Msa0442640 | MtrunA17_Chr5g0421921 | 41.284 | 109 | 63 | 1 | 915 | 1023 | 5 | 112 | 4.25e-18 | 81.3 |
Msa0442640 | MtrunA17_Chr5g0421921 | 35.577 | 104 | 66 | 1 | 131 | 234 | 2 | 104 | 5.56e-11 | 60.8 |
Msa0442640 | MtrunA17_Chr5g0421731 | 40.187 | 107 | 63 | 1 | 396 | 502 | 3 | 108 | 2.03e-18 | 82.0 |
Msa0442640 | MtrunA17_Chr5g0421731 | 41.284 | 109 | 63 | 1 | 915 | 1023 | 5 | 112 | 4.25e-18 | 81.3 |
Msa0442640 | MtrunA17_Chr5g0421731 | 35.577 | 104 | 66 | 1 | 131 | 234 | 2 | 104 | 5.56e-11 | 60.8 |
Msa0442640 | MtrunA17_Chr5g0421851 | 36.025 | 161 | 88 | 4 | 871 | 1023 | 34 | 187 | 2.73e-18 | 84.0 |
Msa0442640 | MtrunA17_Chr5g0421851 | 40.187 | 107 | 63 | 1 | 396 | 502 | 78 | 183 | 7.14e-18 | 82.8 |
Msa0442640 | MtrunA17_Chr5g0421851 | 35.135 | 111 | 71 | 1 | 124 | 234 | 70 | 179 | 6.97e-12 | 65.5 |
Msa0442640 | MtrunA17_Chr5g0419201 | 37.755 | 98 | 61 | 0 | 253 | 350 | 9 | 106 | 3.71e-18 | 84.0 |
Msa0442640 | MtrunA17_Chr5g0419201 | 32.308 | 130 | 82 | 3 | 539 | 663 | 16 | 144 | 1.39e-13 | 70.5 |
Msa0442640 | MtrunA17_Chr5g0419201 | 32.184 | 87 | 59 | 0 | 782 | 868 | 16 | 102 | 1.16e-12 | 67.8 |
Msa0442640 | MtrunA17_Chr5g0419201 | 34.483 | 87 | 57 | 0 | 23 | 109 | 16 | 102 | 1.95e-11 | 64.3 |
Msa0442640 | MtrunA17_Chr1g0154161 | 26.690 | 281 | 165 | 9 | 259 | 501 | 29 | 306 | 2.18e-17 | 84.7 |
Msa0442640 | MtrunA17_Chr7g0233541 | 27.526 | 287 | 140 | 8 | 276 | 502 | 2 | 280 | 2.19e-17 | 84.0 |
Msa0442640 | MtrunA17_Chr7g0233541 | 25.685 | 292 | 140 | 10 | 798 | 1022 | 2 | 283 | 1.85e-12 | 69.3 |
Msa0442640 | MtrunA17_Chr4g0067431 | 27.667 | 300 | 158 | 10 | 259 | 501 | 14 | 311 | 2.18e-16 | 81.6 |
Msa0442640 | MtrunA17_Chr1g0162421 | 50.000 | 58 | 29 | 0 | 274 | 331 | 7 | 64 | 2.73e-16 | 74.3 |
Msa0442640 | MtrunA17_Chr1g0162421 | 46.552 | 58 | 31 | 0 | 796 | 853 | 7 | 64 | 1.52e-14 | 69.3 |
Msa0442640 | MtrunA17_Chr1g0162421 | 43.103 | 58 | 33 | 0 | 37 | 94 | 7 | 64 | 7.53e-13 | 64.3 |
Msa0442640 | MtrunA17_Chr1g0162421 | 40.000 | 55 | 33 | 0 | 553 | 607 | 7 | 61 | 1.75e-11 | 60.5 |
Msa0442640 | MtrunA17_Chr7g0233571 | 40.217 | 92 | 55 | 0 | 259 | 350 | 9 | 100 | 1.19e-15 | 77.4 |
Msa0442640 | MtrunA17_Chr7g0233571 | 33.010 | 103 | 65 | 1 | 538 | 636 | 9 | 111 | 9.69e-14 | 71.6 |
Msa0442640 | MtrunA17_Chr7g0233571 | 33.028 | 109 | 73 | 0 | 781 | 889 | 9 | 117 | 2.52e-12 | 67.8 |
Msa0442640 | MtrunA17_Chr7g0233571 | 32.955 | 88 | 59 | 0 | 22 | 109 | 9 | 96 | 3.39e-11 | 64.3 |
Msa0442640 | MtrunA17_Chr3g0103151 | 35.200 | 125 | 73 | 2 | 259 | 383 | 11 | 127 | 3.33e-15 | 74.3 |
Msa0442640 | MtrunA17_Chr3g0103151 | 33.333 | 147 | 90 | 3 | 538 | 680 | 11 | 153 | 1.41e-13 | 69.7 |
Msa0442640 | MtrunA17_Chr3g0103151 | 33.051 | 118 | 76 | 2 | 781 | 898 | 11 | 125 | 9.10e-13 | 67.4 |
Msa0442640 | MtrunA17_Chr3g0103151 | 35.227 | 88 | 55 | 1 | 22 | 109 | 11 | 96 | 5.05e-11 | 62.4 |
Msa0442640 | MtrunA17_Chr1g0163221 | 26.667 | 285 | 163 | 9 | 259 | 501 | 10 | 290 | 1.14e-14 | 77.0 |
Msa0442640 | MtrunA17_Chr1g0171611 | 25.088 | 283 | 176 | 7 | 258 | 514 | 7 | 279 | 1.42e-14 | 75.5 |
Msa0442640 | MtrunA17_Chr1g0171611 | 24.345 | 267 | 165 | 9 | 780 | 1017 | 7 | 265 | 3.23e-11 | 65.5 |
Msa0442640 | MtrunA17_Chr3g0103191 | 42.222 | 90 | 50 | 1 | 260 | 349 | 12 | 99 | 3.13e-13 | 70.9 |
Msa0442640 | MtrunA17_Chr3g0103191 | 26.423 | 246 | 133 | 8 | 782 | 985 | 12 | 251 | 1.81e-12 | 68.6 |
Msa0442640 | MtrunA17_Chr3g0103191 | 38.384 | 99 | 55 | 2 | 539 | 633 | 12 | 108 | 1.04e-11 | 66.2 |
Msa0442640 | MtrunA17_Chr6g0467351 | 32.374 | 139 | 86 | 3 | 244 | 376 | 1 | 137 | 1.53e-12 | 68.6 |
Msa0442640 | MtrunA17_Chr1g0154041 | 34.066 | 91 | 59 | 1 | 259 | 349 | 15 | 104 | 1.90e-12 | 71.2 |
Msa0442640 | MtrunA17_Chr1g0154101 | 33.871 | 124 | 74 | 3 | 234 | 350 | 150 | 272 | 9.61e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0442640 | AT3G18990.1 | 42.991 | 107 | 61 | 0 | 260 | 366 | 6 | 112 | 2.31e-23 | 103 |
Msa0442640 | AT3G18990.1 | 43.678 | 87 | 49 | 0 | 782 | 868 | 6 | 92 | 5.49e-18 | 87.0 |
Msa0442640 | AT3G18990.1 | 38.384 | 99 | 57 | 1 | 539 | 633 | 6 | 104 | 2.21e-17 | 85.5 |
Msa0442640 | AT3G18990.1 | 38.542 | 96 | 58 | 1 | 23 | 118 | 6 | 100 | 9.16e-16 | 80.5 |
Msa0442640 | AT3G18990.1 | 34.266 | 143 | 82 | 5 | 888 | 1024 | 205 | 341 | 3.14e-12 | 69.7 |
Msa0442640 | AT3G18990.1 | 43.119 | 109 | 54 | 3 | 133 | 236 | 229 | 334 | 6.13e-12 | 68.9 |
Msa0442640 | AT3G18990.2 | 44.660 | 103 | 57 | 0 | 260 | 362 | 6 | 108 | 4.21e-23 | 103 |
Msa0442640 | AT3G18990.2 | 43.678 | 87 | 49 | 0 | 782 | 868 | 6 | 92 | 1.03e-17 | 86.7 |
Msa0442640 | AT3G18990.2 | 38.384 | 99 | 57 | 1 | 539 | 633 | 6 | 104 | 3.18e-17 | 85.5 |
Msa0442640 | AT3G18990.2 | 38.542 | 96 | 58 | 1 | 23 | 118 | 6 | 100 | 1.30e-15 | 80.5 |
Msa0442640 | AT3G18990.2 | 34.722 | 144 | 82 | 5 | 888 | 1025 | 205 | 342 | 1.71e-12 | 70.9 |
Msa0442640 | AT3G18990.2 | 43.119 | 109 | 54 | 3 | 133 | 236 | 229 | 334 | 6.61e-12 | 68.9 |
Msa0442640 | AT3G18960.2 | 36.923 | 130 | 75 | 2 | 233 | 355 | 1 | 130 | 6.39e-17 | 80.9 |
Msa0442640 | AT3G18960.2 | 34.259 | 108 | 67 | 1 | 532 | 635 | 23 | 130 | 1.20e-14 | 73.9 |
Msa0442640 | AT3G18960.2 | 34.454 | 119 | 75 | 1 | 751 | 869 | 2 | 117 | 2.56e-13 | 70.1 |
Msa0442640 | AT3G18960.2 | 34.043 | 94 | 62 | 0 | 16 | 109 | 23 | 116 | 1.28e-11 | 65.5 |
Msa0442640 | AT3G18960.1 | 36.923 | 130 | 75 | 2 | 233 | 355 | 1 | 130 | 1.32e-16 | 80.1 |
Msa0442640 | AT3G18960.1 | 34.259 | 108 | 67 | 1 | 532 | 635 | 23 | 130 | 3.15e-14 | 73.2 |
Msa0442640 | AT3G18960.1 | 34.454 | 119 | 75 | 1 | 751 | 869 | 2 | 117 | 3.49e-13 | 70.1 |
Msa0442640 | AT3G18960.1 | 34.043 | 94 | 62 | 0 | 16 | 109 | 23 | 116 | 2.91e-11 | 64.7 |
Msa0442640 | AT4G01580.1 | 40.777 | 103 | 56 | 1 | 258 | 355 | 28 | 130 | 3.24e-16 | 78.6 |
Msa0442640 | AT4G01580.1 | 33.636 | 110 | 69 | 1 | 532 | 637 | 23 | 132 | 5.78e-15 | 75.1 |
Msa0442640 | AT4G01580.1 | 35.294 | 119 | 74 | 1 | 751 | 869 | 2 | 117 | 1.16e-14 | 73.9 |
Msa0442640 | AT4G01580.1 | 35.106 | 94 | 61 | 0 | 16 | 109 | 23 | 116 | 4.99e-12 | 66.2 |
Msa0442640 | AT1G49475.1 | 39.640 | 111 | 61 | 2 | 258 | 363 | 32 | 141 | 1.40e-15 | 76.6 |
Msa0442640 | AT1G49475.1 | 33.099 | 142 | 82 | 3 | 514 | 643 | 1 | 141 | 1.80e-15 | 76.3 |
Msa0442640 | AT1G26680.5 | 23.389 | 543 | 328 | 26 | 22 | 500 | 14 | 532 | 4.89e-14 | 77.4 |
Msa0442640 | AT1G26680.6 | 23.389 | 543 | 328 | 26 | 22 | 500 | 14 | 532 | 5.92e-14 | 77.0 |
Msa0442640 | AT1G49480.3 | 35.338 | 133 | 76 | 4 | 898 | 1024 | 98 | 226 | 7.64e-14 | 72.4 |
Msa0442640 | AT1G49480.3 | 45.045 | 111 | 51 | 5 | 133 | 237 | 114 | 220 | 8.17e-13 | 69.7 |
Msa0442640 | AT1G49480.1 | 35.338 | 133 | 76 | 4 | 898 | 1024 | 98 | 226 | 7.64e-14 | 72.4 |
Msa0442640 | AT1G49480.1 | 45.045 | 111 | 51 | 5 | 133 | 237 | 114 | 220 | 8.17e-13 | 69.7 |
Msa0442640 | AT1G49480.2 | 35.338 | 133 | 76 | 4 | 898 | 1024 | 98 | 226 | 7.64e-14 | 72.4 |
Msa0442640 | AT1G49480.2 | 45.045 | 111 | 51 | 5 | 133 | 237 | 114 | 220 | 8.17e-13 | 69.7 |
Msa0442640 | AT3G18960.3 | 38.636 | 88 | 49 | 1 | 273 | 355 | 6 | 93 | 1.24e-11 | 64.7 |
Msa0442640 | AT1G26680.1 | 20.516 | 697 | 414 | 29 | 22 | 603 | 14 | 685 | 6.52e-11 | 67.0 |
Msa0442640 | AT1G26680.4 | 20.516 | 697 | 414 | 29 | 22 | 603 | 14 | 685 | 7.38e-11 | 67.0 |
Msa0442640 | AT4G31640.1 | 26.437 | 261 | 154 | 11 | 257 | 505 | 11 | 245 | 7.87e-11 | 65.5 |
Find 197 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGCTTTCCTTGTGAATTT+TGG | 0.083618 | 3_3:-12554506 | None:intergenic |
ACTGCTTTCCTTGATAATTT+TGG | 0.125823 | 3_3:-12560623 | None:intergenic |
ACAGCTTTCCTTGAGAATTT+TGG | 0.151929 | 3_3:-12556030 | None:intergenic |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3_3:+12554121 | Msa0442640:CDS |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3_3:+12560229 | Msa0442640:CDS |
TTGTTGTCCGTTATAAAATT+AGG | 0.232666 | 3_3:-12562152 | None:intergenic |
AATGAAACATACTATTTCTT+TGG | 0.239006 | 3_3:-12559743 | None:intergenic |
GATGAGCTTATAACAAGATT+TGG | 0.255560 | 3_3:+12561471 | Msa0442640:CDS |
TTCAAAACTTCAAGTGTTAC+TGG | 0.260689 | 3_3:+12561717 | Msa0442640:CDS |
AATTACTATTCGTTAGGATA+TGG | 0.265897 | 3_3:+12555573 | Msa0442640:CDS |
GGAAAGCAGTGGGAAGTTTC+TGG | 0.267335 | 3_3:+12560636 | Msa0442640:CDS |
GATGAGTTCATAACAAGATT+TGG | 0.268341 | 3_3:+12555435 | Msa0442640:CDS |
TATTGTGTATTGCATGAAAA+AGG | 0.278258 | 3_3:+12554537 | Msa0442640:CDS |
AAATACTATTCGTTAGGATA+TGG | 0.294914 | 3_3:+12561609 | Msa0442640:CDS |
GAGCTTGAACGGAACCTTTA+GGG | 0.299957 | 3_3:-12554484 | None:intergenic |
CTCCATTAGTCCTCCGAGTT+TGG | 0.310150 | 3_3:-12560339 | None:intergenic |
TACTATCTCTTTGTCATGAA+TGG | 0.314672 | 3_3:-12554906 | None:intergenic |
TACTATCTCTTTGTCATGAA+TGG | 0.314672 | 3_3:-12561022 | None:intergenic |
AAGGGAAAACAATCTATTAA+AGG | 0.316256 | 3_3:+12554602 | Msa0442640:CDS |
GGCAGCATCCTTTGATCTTT+CGG | 0.316735 | 3_3:-12560392 | None:intergenic |
ATGCGAATAACGGGTGGATT+TGG | 0.321640 | 3_3:+12554570 | Msa0442640:CDS |
AAGTGAGTGTCATGGGAAAA+AGG | 0.323227 | 3_3:+12561791 | Msa0442640:CDS |
TATGGCTTTCATAAAATGTT+TGG | 0.328767 | 3_3:-12553197 | None:intergenic |
TATGGCTTTCATAAAATGTT+TGG | 0.328767 | 3_3:-12559701 | None:intergenic |
TATGGCCTTCTTGAAATGTT+TGG | 0.331141 | 3_3:-12560989 | None:intergenic |
ACGAGTGGATTCTATAGATT+TGG | 0.332725 | 3_3:+12560696 | Msa0442640:CDS |
GGAGCTTGAACGGAACCTTT+AGG | 0.336035 | 3_3:-12554485 | None:intergenic |
TGGAGCTTTGTAGGAACATT+TGG | 0.337830 | 3_3:-12562047 | None:intergenic |
GCTCTTCTGGAAGCAGAGTT+AGG | 0.343489 | 3_3:-12554267 | None:intergenic |
CTACTTCTATGAAAAGTTCC+AGG | 0.344709 | 3_3:+12555724 | Msa0442640:CDS |
TCCCTTTGTATTTGAAAGAT+AGG | 0.356495 | 3_3:-12561638 | None:intergenic |
TCCATTGTGTAGTATGTTCC+TGG | 0.362474 | 3_3:+12560555 | Msa0442640:intron |
CGATGGTCATGAATGGGAAA+TGG | 0.364796 | 3_3:+12560150 | Msa0442640:CDS |
GGACTAGCACACTTTGTGTT+TGG | 0.364884 | 3_3:-12561744 | None:intergenic |
ACTATTTCTTTGGTGTGATC+TGG | 0.366153 | 3_3:-12559733 | None:intergenic |
TGGAGTGCGATTGGAACATT+TGG | 0.367737 | 3_3:-12556010 | None:intergenic |
TGCATAGCAGCCAAAGGCTT+TGG | 0.374814 | 3_3:-12560449 | None:intergenic |
CGATGGTCGTGAATGGGAAA+TGG | 0.374916 | 3_3:+12554042 | Msa0442640:CDS |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3_3:-12554891 | None:intergenic |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3_3:-12561007 | None:intergenic |
ATGAGTTCATAACAAGATTT+GGG | 0.379410 | 3_3:+12555436 | Msa0442640:CDS |
GTTATCACTGCAGAGAATTC+CGG | 0.381761 | 3_3:+12555413 | Msa0442640:intron |
TGGAGCATGAACGGAACATT+TGG | 0.383147 | 3_3:-12560603 | None:intergenic |
AATCTTGTTATAAGCTCATC+TGG | 0.387104 | 3_3:-12561468 | None:intergenic |
AGCATGTTTAGACACGCTTT+TGG | 0.391587 | 3_3:-12561814 | None:intergenic |
TTCAAAACTTCAAGTACTAA+TGG | 0.395849 | 3_3:+12554225 | Msa0442640:CDS |
GAGCTCAGACAGTTTATGTT+TGG | 0.396072 | 3_3:-12560364 | None:intergenic |
ATGAGCTTATAACAAGATTT+GGG | 0.396141 | 3_3:+12561472 | Msa0442640:CDS |
GTGGGAAGTTTCTGGTGTAT+TGG | 0.397299 | 3_3:+12560644 | Msa0442640:CDS |
ATTTGCATTGAGAATGAATT+GGG | 0.414962 | 3_3:-12556079 | None:intergenic |
TTCCAAACTCGGAGGACTAA+TGG | 0.416125 | 3_3:+12560337 | Msa0442640:CDS |
TTTCTGTCTTTCAAATATGA+AGG | 0.422326 | 3_3:+12555600 | Msa0442640:CDS |
TTTGCAAATTACTATTCGTT+AGG | 0.423437 | 3_3:+12555567 | Msa0442640:CDS |
TTTGCAAAATACTATTCGTT+AGG | 0.426106 | 3_3:+12561603 | Msa0442640:CDS |
CAGTTCCCGATGGTCGTGAT+TGG | 0.434376 | 3_3:+12555487 | Msa0442640:CDS |
CAGTTCCTGATGGTCGTGAT+TGG | 0.434376 | 3_3:+12561523 | Msa0442640:CDS |
AGGGAAAACAATCTATTAAA+GGG | 0.437546 | 3_3:+12554603 | Msa0442640:CDS |
TTGGAGTCTTTCTCCGGTGC+CGG | 0.438643 | 3_3:-12553178 | None:intergenic |
TTGGAGTCTTTCTCCGGTGC+CGG | 0.438643 | 3_3:-12559682 | None:intergenic |
TATTGCAATGCAGCCTCCAC+AGG | 0.439091 | 3_3:+12560924 | Msa0442640:intron |
TATTTAGATTTCAAGTATGA+AGG | 0.439885 | 3_3:+12554148 | Msa0442640:CDS |
AATTACAGAAAAGGAAGTTA+AGG | 0.441454 | 3_3:+12560963 | Msa0442640:CDS |
CAATGACAGAAAAGGAAGTA+AGG | 0.446214 | 3_3:+12554846 | Msa0442640:CDS |
TATTGCAATGCAGCCTCCAC+GGG | 0.446625 | 3_3:+12554808 | Msa0442640:intron |
TTCTTTGGTGTGATCTGGAG+GGG | 0.446677 | 3_3:-12559728 | None:intergenic |
ACTATCTCTTTGTCATGAAT+GGG | 0.448674 | 3_3:-12554905 | None:intergenic |
ACTATCTCTTTGTCATGAAT+GGG | 0.448674 | 3_3:-12561021 | None:intergenic |
TATTTAGATTTCAAATATGA+AGG | 0.449992 | 3_3:+12560256 | Msa0442640:intron |
ATTGTGACTTCTAGCACAAC+CGG | 0.451587 | 3_3:-12562221 | None:intergenic |
TATTTGCATTGAGAATGAAT+TGG | 0.458395 | 3_3:-12556080 | None:intergenic |
ACACTCACTTGTTTCAACCT+TGG | 0.458460 | 3_3:-12561778 | None:intergenic |
CTGTTCCCGATGGTCGTGAA+TGG | 0.460301 | 3_3:+12554035 | Msa0442640:CDS |
AGATCACACATGCGAATAAC+GGG | 0.463203 | 3_3:+12554561 | Msa0442640:CDS |
ACCTATCTTTCAAATACAAA+GGG | 0.468933 | 3_3:+12561637 | Msa0442640:CDS |
AAATGTTTGGAGTCTTTCTC+CGG | 0.471746 | 3_3:-12553184 | None:intergenic |
AAATGTTTGGAGTCTTTCTC+CGG | 0.471746 | 3_3:-12559688 | None:intergenic |
TCTTTCTCCGGTGCCGGTGA+CGG | 0.475517 | 3_3:-12553172 | None:intergenic |
TCTTTCTCCGGTGCCGGTGA+CGG | 0.475517 | 3_3:-12559676 | None:intergenic |
TTGTGTATTTGAGTTGATCA+AGG | 0.476643 | 3_3:+12556156 | Msa0442640:CDS |
ATTTCTTTGGTGTGATCTGG+AGG | 0.477704 | 3_3:-12559730 | None:intergenic |
TTTCTTATCCATTCCAAACT+CGG | 0.478870 | 3_3:+12560326 | Msa0442640:CDS |
TGCCCAGTCAATTACAGAAA+AGG | 0.486571 | 3_3:+12560954 | Msa0442640:CDS |
CTGTTCCCGATGGTCATGAA+TGG | 0.486944 | 3_3:+12560143 | Msa0442640:CDS |
AATCTTGTTATGAACTCATC+CGG | 0.487752 | 3_3:-12555432 | None:intergenic |
TTCTGTCTTTCAAATATGAA+GGG | 0.490414 | 3_3:+12555601 | Msa0442640:CDS |
CTCTTTGTCATGAATGGGCG+AGG | 0.492559 | 3_3:-12554900 | None:intergenic |
CTCTTTGTCATGAATGGGCG+AGG | 0.492559 | 3_3:-12561016 | None:intergenic |
CATTTCCCATTCACGACCAT+CGG | 0.495250 | 3_3:-12554041 | None:intergenic |
CATTCTCAATGCAAATAACA+AGG | 0.496017 | 3_3:+12556086 | Msa0442640:CDS |
GTAACTTGTAACACCACAAC+AGG | 0.496207 | 3_3:-12560777 | None:intergenic |
GATGGTCATGAATGGGAAAT+GGG | 0.496743 | 3_3:+12560151 | Msa0442640:CDS |
GATGGTCGTGAATGGGAAAT+GGG | 0.497506 | 3_3:+12554043 | Msa0442640:CDS |
ACACAAAGTGTGCTAGTCCT+AGG | 0.498715 | 3_3:+12561748 | Msa0442640:CDS |
TTTCTTTGGTGTGATCTGGA+GGG | 0.501002 | 3_3:-12559729 | None:intergenic |
ATTTCCCATTCACGACCATC+GGG | 0.501758 | 3_3:-12554040 | None:intergenic |
TCCGGTGCCGGTGACGGTGT+CGG | 0.503622 | 3_3:-12553166 | None:intergenic |
TCCGGTGCCGGTGACGGTGT+CGG | 0.503622 | 3_3:-12559670 | None:intergenic |
CATTTCCCATTCATGACCAT+CGG | 0.508232 | 3_3:-12560149 | None:intergenic |
TACCTATCTTTCAAATACAA+AGG | 0.508968 | 3_3:+12561636 | Msa0442640:CDS |
GTGGATTTGGTAAATTTGCA+AGG | 0.510118 | 3_3:+12554583 | Msa0442640:CDS |
GCTGTAACAAGTAGTACAAC+AGG | 0.510742 | 3_3:-12554660 | None:intergenic |
TCCGACACCGTCACCGGCAC+CGG | 0.511549 | 3_3:+12553165 | Msa0442640:CDS |
TCCGACACCGTCACCGGCAC+CGG | 0.511549 | 3_3:+12559669 | Msa0442640:CDS |
TTGAAACAAGTGAGTGTCAT+GGG | 0.514216 | 3_3:+12561784 | Msa0442640:CDS |
TGTTCCCGATGGTCGTGAAT+GGG | 0.514313 | 3_3:+12554036 | Msa0442640:CDS |
ACTGTTGCCAATTGTTGCTA+AGG | 0.515477 | 3_3:-12554093 | None:intergenic |
ACTGTTGCCAATTGTTGCTA+AGG | 0.515477 | 3_3:-12560201 | None:intergenic |
AAGATCACACATGCGAATAA+CGG | 0.515693 | 3_3:+12554560 | Msa0442640:CDS |
ATTTCCCATTCATGACCATC+GGG | 0.517431 | 3_3:-12560148 | None:intergenic |
TTCATGCTCCAAAATTATCA+AGG | 0.518713 | 3_3:+12560615 | Msa0442640:CDS |
ACAAAGCTCCAAAATTCTGA+TGG | 0.522166 | 3_3:+12562059 | Msa0442640:CDS |
TGCCCAGTCAATGACAGAAA+AGG | 0.524540 | 3_3:+12554838 | Msa0442640:CDS |
ACTGCCACTTGTTTCAACCC+TGG | 0.525622 | 3_3:-12555742 | None:intergenic |
TGTTCCCGATGGTCATGAAT+GGG | 0.526364 | 3_3:+12560144 | Msa0442640:CDS |
CTCTGCTTCCGAAAGATCAA+AGG | 0.527426 | 3_3:+12560384 | Msa0442640:CDS |
GGAATCCAAACATTTCAAGA+AGG | 0.529320 | 3_3:+12560984 | Msa0442640:CDS |
TGAGTTGATCAAGGAGAAGC+CGG | 0.530941 | 3_3:+12556165 | Msa0442640:CDS |
GTGTCGGAACACATCTTCTC+CGG | 0.535373 | 3_3:-12553150 | None:intergenic |
GTGTCGGAACACATCTTCTC+CGG | 0.535373 | 3_3:-12559654 | None:intergenic |
ATTTAGATTTCAAGTATGAA+GGG | 0.536271 | 3_3:+12554149 | Msa0442640:CDS |
TGGGCACACCTTCCCTGTGG+AGG | 0.538744 | 3_3:-12560937 | None:intergenic |
GTGGATTCTATAGATTTGGA+AGG | 0.539846 | 3_3:+12560700 | Msa0442640:CDS |
ATTTAGATTTCAAATATGAA+GGG | 0.541446 | 3_3:+12560257 | Msa0442640:intron |
GTTGAAACAAGTGGCAGTCA+AGG | 0.541942 | 3_3:+12555747 | Msa0442640:CDS |
CCTCACCGCATATTTCGTCT+TGG | 0.545297 | 3_3:-12561904 | None:intergenic |
ACAAGTTACTGCTTCTTGCA+CGG | 0.545719 | 3_3:+12560791 | Msa0442640:CDS |
TTAGTCCTCCGAGTTTGGAA+TGG | 0.546192 | 3_3:-12560334 | None:intergenic |
TCTTTGGTGTGATCTGGAGG+GGG | 0.546441 | 3_3:-12559727 | None:intergenic |
AGATCAAAGGATGCTGCCAA+TGG | 0.547942 | 3_3:+12560397 | Msa0442640:CDS |
ATCGTCTATGCGAATAGTGA+AGG | 0.551631 | 3_3:+12562124 | Msa0442640:CDS |
TTATTGCAATGCAGCCTCCA+CGG | 0.552353 | 3_3:+12554807 | Msa0442640:intron |
AGTGTGCTAGTCCTAGGAAA+AGG | 0.553447 | 3_3:+12561754 | Msa0442640:CDS |
ATGTGTTCCGACACCGTCAC+CGG | 0.555592 | 3_3:+12553159 | Msa0442640:CDS |
ATGTGTTCCGACACCGTCAC+CGG | 0.555592 | 3_3:+12559663 | Msa0442640:CDS |
TGAAAAGTATCTGACCCTAA+AGG | 0.565833 | 3_3:+12554470 | Msa0442640:CDS |
AATTTCTAAGCGAAATCTTG+TGG | 0.569288 | 3_3:+12555863 | Msa0442640:CDS |
AAAATTATCAAGGAAAGCAG+TGG | 0.569536 | 3_3:+12560625 | Msa0442640:CDS |
AATGACAGAAAAGGAAGTAA+GGG | 0.571733 | 3_3:+12554847 | Msa0442640:CDS |
AAAATTCTCAAGGAAAGCTG+TGG | 0.573034 | 3_3:+12556032 | Msa0442640:CDS |
TGTTCCTGGTGAATTTGCTA+AGG | 0.578362 | 3_3:+12560569 | Msa0442640:CDS |
ATTCTCAATGCAAATAACAA+GGG | 0.579626 | 3_3:+12556087 | Msa0442640:CDS |
TTCTCAATGCAAATAACAAG+GGG | 0.581315 | 3_3:+12556088 | Msa0442640:CDS |
TACTTCTATGAAAAGTTCCA+GGG | 0.583386 | 3_3:+12555725 | Msa0442640:CDS |
ATGTGTTTGAGCTGATCAAG+AGG | 0.588245 | 3_3:+12554634 | Msa0442640:CDS |
ATGACCATCGGGAACAGTAA+TGG | 0.588903 | 3_3:-12560137 | None:intergenic |
TGGATTTGGTAAATTTGCAA+GGG | 0.592515 | 3_3:+12554584 | Msa0442640:CDS |
AAGGGAAAACAATCTATCAA+AGG | 0.593937 | 3_3:+12560719 | Msa0442640:CDS |
ATCGCACTCCAAAATTCTCA+AGG | 0.598710 | 3_3:+12556022 | Msa0442640:CDS |
AAAATTCACAAGGAAAGCAG+TGG | 0.601932 | 3_3:+12554508 | Msa0442640:CDS |
CAATGCAGCCTCCACAGGGA+AGG | 0.602685 | 3_3:+12560929 | Msa0442640:intron |
GCTAAGATTACTGTTCCCGA+TGG | 0.603036 | 3_3:+12554025 | Msa0442640:CDS |
ACAACTTTGAGCTGATCAAG+AGG | 0.603297 | 3_3:+12560751 | Msa0442640:CDS |
AAATTATCAAGGAAAGCAGT+GGG | 0.608378 | 3_3:+12560626 | Msa0442640:CDS |
AATAATCTCCATGTGTCAGA+TGG | 0.608955 | 3_3:-12556135 | None:intergenic |
GCTACAGTTACAGTTCCTGA+TGG | 0.609577 | 3_3:+12561513 | Msa0442640:CDS |
GTTGAAACAAGTGAGTGTCA+TGG | 0.609710 | 3_3:+12561783 | Msa0442640:CDS |
AAATTCTGATGGAAAACAGT+GGG | 0.613196 | 3_3:+12562070 | Msa0442640:CDS |
TTGAAACAAGTGGCAGTCAA+GGG | 0.614317 | 3_3:+12555748 | Msa0442640:CDS |
TACTGCATAAAAGCCCCTGA+CGG | 0.614950 | 3_3:-12554343 | None:intergenic |
TCGTCTATGCGAATAGTGAA+GGG | 0.615382 | 3_3:+12562125 | Msa0442640:CDS |
ACTTGTTACAGCGATTTGCA+CGG | 0.615517 | 3_3:+12554671 | Msa0442640:CDS |
TGAGCTCATCAAGAAGAAGC+CGG | 0.617788 | 3_3:+12562202 | Msa0442640:CDS |
TGGATTCTATAGATTTGGAA+GGG | 0.619936 | 3_3:+12560701 | Msa0442640:CDS |
AAAATTCTGATGGAAAACAG+TGG | 0.620787 | 3_3:+12562069 | Msa0442640:CDS |
GCTACCATTACTGTTCCCGA+TGG | 0.621287 | 3_3:+12560133 | Msa0442640:CDS |
TAGAAACAATGAAGACTCGC+CGG | 0.625107 | 3_3:+12553131 | None:intergenic |
TAGAAACAATGAAGACTCGC+CGG | 0.625107 | 3_3:+12559635 | Msa0442640:CDS |
TGCTCCTTAGCAAATTCACC+AGG | 0.628603 | 3_3:-12560573 | None:intergenic |
AGTTCCAGGGTTGAAACAAG+TGG | 0.632824 | 3_3:+12555738 | Msa0442640:CDS |
TGGGCAGACATTCCCCGTGG+AGG | 0.633574 | 3_3:-12554821 | None:intergenic |
CCTCACTGCATAGCAGCCAA+AGG | 0.634621 | 3_3:-12560455 | None:intergenic |
AAATTCACAAGGAAAGCAGT+GGG | 0.637805 | 3_3:+12554509 | Msa0442640:CDS |
TCAGCAATGCGAATTACGAG+TGG | 0.638532 | 3_3:+12560681 | Msa0442640:CDS |
ACATGCCTTTAAAAGTGCAG+AGG | 0.638536 | 3_3:+12555794 | Msa0442640:CDS |
TTTCGATCAAAATCCGTCAG+GGG | 0.644334 | 3_3:+12554330 | Msa0442640:CDS |
AAGGACAACCATCTGACACA+TGG | 0.646280 | 3_3:+12556127 | Msa0442640:CDS |
TCTTTGTCATGAATGGGCGA+GGG | 0.647829 | 3_3:-12554899 | None:intergenic |
TCTTTGTCATGAATGGGCGA+GGG | 0.647829 | 3_3:-12561015 | None:intergenic |
CTTATCCATTCCAAACTCGG+AGG | 0.649382 | 3_3:+12560329 | Msa0442640:CDS |
AAAAGTCACAATGTTTCGTG+CGG | 0.653466 | 3_3:+12556195 | Msa0442640:CDS |
GCTACAATTACAGTTCCCGA+TGG | 0.653468 | 3_3:+12555477 | Msa0442640:CDS |
TAGTCCTAGGAAAAGGTCCA+AGG | 0.655098 | 3_3:+12561761 | Msa0442640:CDS |
GATCAAGAGGAAGCCTGTTG+TGG | 0.656312 | 3_3:+12560764 | Msa0442640:CDS |
TTCAAGCTCCAAAATTCACA+AGG | 0.659089 | 3_3:+12554498 | Msa0442640:CDS |
TCGCATAGACGATGATCTGA+CGG | 0.661216 | 3_3:-12562114 | None:intergenic |
ACATGCTTCTACAAGAGCAG+AGG | 0.662151 | 3_3:+12561830 | Msa0442640:CDS |
GACTGGGCACACCTTCCCTG+TGG | 0.662245 | 3_3:-12560940 | None:intergenic |
ACGGACAACAATCTGTCACA+TGG | 0.662347 | 3_3:+12562164 | Msa0442640:CDS |
ATTGCAATGCAGCCTCCACA+GGG | 0.663913 | 3_3:+12560925 | Msa0442640:intron |
TCACACATGCGAATAACGGG+TGG | 0.671816 | 3_3:+12554564 | Msa0442640:CDS |
TACTTCACAGCAAAATCACA+AGG | 0.676887 | 3_3:-12562017 | None:intergenic |
AAAATGAGATTGAAGAAACG+CGG | 0.691481 | 3_3:+12561546 | Msa0442640:CDS |
GAAATGGGACTGAAGAAATG+TGG | 0.715375 | 3_3:+12554058 | Msa0442640:CDS |
GAAATGGGACTGAAGAAATG+TGG | 0.715375 | 3_3:+12560166 | Msa0442640:CDS |
GACTGGGCAGACATTCCCCG+TGG | 0.720587 | 3_3:-12554824 | None:intergenic |
ATTGCAATGCAGCCTCCACG+GGG | 0.736037 | 3_3:+12554809 | Msa0442640:intron |
AATCGCCAAGACGAAATATG+CGG | 0.738605 | 3_3:+12561899 | Msa0442640:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTTTTTTTTTATATTTT+AGG | - | chr3_3:12558789-12558808 | None:intergenic | 0.0% |
!!! | TTTTTTAATTCTTCTTATTA+TGG | - | chr3_3:12555076-12555095 | None:intergenic | 10.0% |
!! | TCTTACTTATTATTTATTTA+AGG | + | chr3_3:12557426-12557445 | Msa0442640:intron | 10.0% |
!!! | TTTTTTTATTTATTTTGAAG+AGG | + | chr3_3:12557934-12557953 | Msa0442640:intron | 10.0% |
!!! | TTTTTTATTTATTTTGAAGA+GGG | + | chr3_3:12557935-12557954 | Msa0442640:intron | 10.0% |
!! | TATTAGAAACTTTATATATT+TGG | + | chr3_3:12558235-12558254 | Msa0442640:intron | 10.0% |
!! | AAAAAAATAATTCAATTGAT+AGG | + | chr3_3:12558552-12558571 | Msa0442640:intron | 10.0% |
!!! | TTTTTTTTTTATATTTTAGG+CGG | - | chr3_3:12558786-12558805 | None:intergenic | 10.0% |
!!! | TTAACTGAATTATTTTTATA+TGG | - | chr3_3:12559126-12559145 | None:intergenic | 10.0% |
!! | TAATCATTAAATATTATGTT+TGG | + | chr3_3:12559262-12559281 | Msa0442640:intron | 10.0% |
!! | AATCATTAAATATTATGTTT+GGG | + | chr3_3:12559263-12559282 | Msa0442640:intron | 10.0% |
!! | AACTATATTCTTAATTTAAT+CGG | - | chr3_3:12559306-12559325 | None:intergenic | 10.0% |
!! | GAATACTATTCTATTTATTA+TGG | + | chr3_3:12554121-12554140 | Msa0442640:CDS | 15.0% |
!! | TATTATATTTGATGTAACTT+CGG | + | chr3_3:12555641-12555660 | Msa0442640:intron | 15.0% |
!!! | AAATTTTTGAAGAAAAGTAA+GGG | - | chr3_3:12555848-12555867 | None:intergenic | 15.0% |
!! | ACTTATATGTGAAATTATAA+TGG | + | chr3_3:12556461-12556480 | Msa0442640:intron | 15.0% |
!!! | TTTTTTCATCAACAAAAATA+TGG | + | chr3_3:12557638-12557657 | Msa0442640:intron | 15.0% |
!!! | TATATCTATCTCTTTTATAA+TGG | - | chr3_3:12557765-12557784 | None:intergenic | 15.0% |
!!! | TTTTTATTTATTTTGAAGAG+GGG | + | chr3_3:12557936-12557955 | Msa0442640:intron | 15.0% |
!! | ATATTTGGATTAATATTCTA+TGG | + | chr3_3:12558250-12558269 | Msa0442640:intron | 15.0% |
!! | AAATGTTGAATTAATAATAG+AGG | - | chr3_3:12558859-12558878 | None:intergenic | 15.0% |
!!! | TTATTTTTATATGGAGTTTT+AGG | - | chr3_3:12559117-12559136 | None:intergenic | 15.0% |
!!! | TTTTGTTAAATAGTAGTAAA+TGG | - | chr3_3:12559218-12559237 | None:intergenic | 15.0% |
!!! | ATCATAGTTTAGTTTATATA+TGG | + | chr3_3:12559483-12559502 | Msa0442640:intron | 15.0% |
!!! | AATCTTTTTATAAACTCATT+TGG | - | chr3_3:12560091-12560110 | None:intergenic | 15.0% |
!! | AATGAGTTTATAAAAAGATT+TGG | + | chr3_3:12560091-12560110 | Msa0442640:CDS | 15.0% |
!! | GAATACTATTCTATTTATTA+TGG | + | chr3_3:12554121-12554140 | Msa0442640:CDS | 15.0% |
!! | TATTTAGATTTCAAATATGA+AGG | + | chr3_3:12560256-12560275 | Msa0442640:intron | 15.0% |
!! | ATTTAGATTTCAAATATGAA+GGG | + | chr3_3:12560257-12560276 | Msa0442640:intron | 15.0% |
!!! | TTTTTTTATTCTTATCATCA+GGG | - | chr3_3:12561111-12561130 | None:intergenic | 15.0% |
!!! | ATTTTTTTATTCTTATCATC+AGG | - | chr3_3:12561112-12561131 | None:intergenic | 15.0% |
!! | AGCATAAAATTATAAAAGCA+AGG | - | chr3_3:12553392-12553411 | None:intergenic | 20.0% |
!!! | TTGTTAGTTGTTTTTATGTT+TGG | + | chr3_3:12553456-12553475 | Msa0442640:intron | 20.0% |
!! | TTATAGATAAAGCTAGAAAT+TGG | + | chr3_3:12553565-12553584 | Msa0442640:intron | 20.0% |
!! | ACGAGTTTATAAAAAGATAT+GGG | + | chr3_3:12553984-12554003 | Msa0442640:CDS | 20.0% |
!!! | TATTTAGATTTCAAGTATGA+AGG | + | chr3_3:12554148-12554167 | Msa0442640:CDS | 20.0% |
!!! | ATTTAGATTTCAAGTATGAA+GGG | + | chr3_3:12554149-12554168 | Msa0442640:CDS | 20.0% |
!! | TACGGTATGATTTATATTTA+TGG | + | chr3_3:12554393-12554412 | Msa0442640:intron | 20.0% |
!! | TACCTTTAAACATCAAATTA+GGG | + | chr3_3:12555331-12555350 | Msa0442640:intron | 20.0% |
!! | TCATCTGTTATACTATAATA+CGG | - | chr3_3:12555390-12555409 | None:intergenic | 20.0% |
!!! | GAAATTTTTGAAGAAAAGTA+AGG | - | chr3_3:12555849-12555868 | None:intergenic | 20.0% |
!!! | GAATTTTACTTTGTAGTTTT+TGG | + | chr3_3:12555889-12555908 | Msa0442640:intron | 20.0% |
!!! | TTGATATTTGATAATTTACC+TGG | + | chr3_3:12556299-12556318 | Msa0442640:intron | 20.0% |
!!! | ATTTATGGATTAAACTAACT+TGG | + | chr3_3:12557018-12557037 | Msa0442640:intron | 20.0% |
!! | GCATAAATATATATACCTTT+GGG | - | chr3_3:12557131-12557150 | None:intergenic | 20.0% |
!! | TGCATAAATATATATACCTT+TGG | - | chr3_3:12557132-12557151 | None:intergenic | 20.0% |
!!! | AATGATGATTAATTTGTTTG+TGG | - | chr3_3:12557160-12557179 | None:intergenic | 20.0% |
!! | ATGAGAAGATTAAATATCAA+TGG | + | chr3_3:12557468-12557487 | Msa0442640:intron | 20.0% |
!!! | AAATTGAACTCACATTTTTA+TGG | - | chr3_3:12557529-12557548 | None:intergenic | 20.0% |
!!! | GTTTAAGTGAATTATGTTTT+GGG | - | chr3_3:12557614-12557633 | None:intergenic | 20.0% |
!!! | AGTTTAAGTGAATTATGTTT+TGG | - | chr3_3:12557615-12557634 | None:intergenic | 20.0% |
!! | GTTAAGATCTAATATATACA+TGG | - | chr3_3:12557857-12557876 | None:intergenic | 20.0% |
!!! | TTTCAAATTAGTCTCATTAA+TGG | + | chr3_3:12557889-12557908 | Msa0442640:intron | 20.0% |
!! | GTTTCTAATAAATTTGTGTA+TGG | - | chr3_3:12558225-12558244 | None:intergenic | 20.0% |
!!! | ATATTACATTTTATATGCAG+GGG | - | chr3_3:12558443-12558462 | None:intergenic | 20.0% |
!!! | GATATTACATTTTATATGCA+GGG | - | chr3_3:12558444-12558463 | None:intergenic | 20.0% |
!!! | AGATATTACATTTTATATGC+AGG | - | chr3_3:12558445-12558464 | None:intergenic | 20.0% |
!!! | CTTTTTAAAGTGAATAAGTA+GGG | - | chr3_3:12558503-12558522 | None:intergenic | 20.0% |
!!! | ACTTTTTAAAGTGAATAAGT+AGG | - | chr3_3:12558504-12558523 | None:intergenic | 20.0% |
!!! | ACTTAATGTCTTTATGTTTT+AGG | - | chr3_3:12558826-12558845 | None:intergenic | 20.0% |
!! | TGATGAATAAATGTGAAATT+TGG | - | chr3_3:12559187-12559206 | None:intergenic | 20.0% |
!! | ATTAGAAGTAAAAAAAGTAG+AGG | - | chr3_3:12559425-12559444 | None:intergenic | 20.0% |
!!! | AATGAAACATACTATTTCTT+TGG | - | chr3_3:12553242-12553261 | None:intergenic | 20.0% |
!!! | TTATTTCTTATTGTTGTTGT+TGG | + | chr3_3:12559902-12559921 | Msa0442640:intron | 20.0% |
!!! | GGATTTTACTTTATAGTATT+TGG | + | chr3_3:12560476-12560495 | Msa0442640:intron | 20.0% |
!! | GCAATAACTATTATCAATAT+AGG | - | chr3_3:12560903-12560922 | None:intergenic | 20.0% |
!!! | AACAAAAATAAGGGTTTTTT+GGG | - | chr3_3:12561875-12561894 | None:intergenic | 20.0% |
!!! | CGATTTTTGAACAAAAATAA+GGG | - | chr3_3:12561884-12561903 | None:intergenic | 20.0% |
!!! | GGATTTTACTTTATATCTTT+TGG | + | chr3_3:12561925-12561944 | Msa0442640:intron | 20.0% |
! | TATGGCTTTCATAAAATGTT+TGG | - | chr3_3:12553200-12553219 | None:intergenic | 25.0% |
!! | TGTATAACTCTTTAACTTTG+AGG | + | chr3_3:12553315-12553334 | Msa0442640:intron | 25.0% |
! | AGCATAAAAATCATGTTTGA+TGG | + | chr3_3:12553698-12553717 | Msa0442640:intron | 25.0% |
! | ATAAAAATCATGTTTGATGG+CGG | + | chr3_3:12553701-12553720 | Msa0442640:intron | 25.0% |
! | ATCAATCAAACTTCAAAAGA+GGG | - | chr3_3:12553916-12553935 | None:intergenic | 25.0% |
!! | TATCTTTTTATAAACTCGTC+TGG | - | chr3_3:12553983-12554002 | None:intergenic | 25.0% |
! | GACGAGTTTATAAAAAGATA+TGG | + | chr3_3:12553983-12554002 | Msa0442640:CDS | 25.0% |
!!! | TTAGTACTTGAAGTTTTGAA+TGG | - | chr3_3:12554225-12554244 | None:intergenic | 25.0% |
! | TTCAAAACTTCAAGTACTAA+TGG | + | chr3_3:12554225-12554244 | Msa0442640:CDS | 25.0% |
! | TAATGGTGAGAAAAACATAA+AGG | + | chr3_3:12554242-12554261 | Msa0442640:CDS | 25.0% |
! | AATGGTGAGAAAAACATAAA+GGG | + | chr3_3:12554243-12554262 | Msa0442640:CDS | 25.0% |
!!! | ATCGAAAATAAGGGTTTTTT+GGG | - | chr3_3:12554317-12554336 | None:intergenic | 25.0% |
!!! | CTTTCTGGTTTTTAAAGTTA+CGG | + | chr3_3:12554375-12554394 | Msa0442640:intron | 25.0% |
! | TATTGTGTATTGCATGAAAA+AGG | + | chr3_3:12554537-12554556 | Msa0442640:CDS | 25.0% |
! | AAGGGAAAACAATCTATTAA+AGG | + | chr3_3:12554602-12554621 | Msa0442640:CDS | 25.0% |
! | AGGGAAAACAATCTATTAAA+GGG | + | chr3_3:12554603-12554622 | Msa0442640:CDS | 25.0% |
!! | GTAAAAAAGCATATGTGATT+TGG | + | chr3_3:12554980-12554999 | Msa0442640:intron | 25.0% |
! | CTAAATTGAAAGGTAGTATT+TGG | - | chr3_3:12555216-12555235 | None:intergenic | 25.0% |
!!! | AGATTCAGTTCTAAATTGAA+AGG | - | chr3_3:12555226-12555245 | None:intergenic | 25.0% |
!! | TTCAATTTAGAACTGAATCT+AGG | + | chr3_3:12555226-12555245 | Msa0442640:intron | 25.0% |
!!! | GTTTAAAGGTAGTTTTTCAA+GGG | - | chr3_3:12555322-12555341 | None:intergenic | 25.0% |
!! | TGTTTAAAGGTAGTTTTTCA+AGG | - | chr3_3:12555323-12555342 | None:intergenic | 25.0% |
! | CTACCTTTAAACATCAAATT+AGG | + | chr3_3:12555330-12555349 | Msa0442640:intron | 25.0% |
! | TTCCCTAATTTGATGTTTAA+AGG | - | chr3_3:12555336-12555355 | None:intergenic | 25.0% |
! | ATGAGTTCATAACAAGATTT+GGG | + | chr3_3:12555436-12555455 | Msa0442640:CDS | 25.0% |
!! | ACATTTTCTTTTACAACGAA+TGG | + | chr3_3:12555538-12555557 | Msa0442640:CDS | 25.0% |
! | TTTGCAAATTACTATTCGTT+AGG | + | chr3_3:12555567-12555586 | Msa0442640:CDS | 25.0% |
! | AATTACTATTCGTTAGGATA+TGG | + | chr3_3:12555573-12555592 | Msa0442640:CDS | 25.0% |
! | TTTCTGTCTTTCAAATATGA+AGG | + | chr3_3:12555600-12555619 | Msa0442640:CDS | 25.0% |
! | TTCTGTCTTTCAAATATGAA+GGG | + | chr3_3:12555601-12555620 | Msa0442640:CDS | 25.0% |
!!! | TTAGTACTTAGATTTTTGAG+TGG | - | chr3_3:12555681-12555700 | None:intergenic | 25.0% |
! | CTCAAAAATCTAAGTACTAA+TGG | + | chr3_3:12555681-12555700 | Msa0442640:CDS | 25.0% |
!!! | GTTTTTTGGATTGAATTCAT+TGG | - | chr3_3:12555826-12555845 | None:intergenic | 25.0% |
! | ATTTGCATTGAGAATGAATT+GGG | - | chr3_3:12556082-12556101 | None:intergenic | 25.0% |
! | TATTTGCATTGAGAATGAAT+TGG | - | chr3_3:12556083-12556102 | None:intergenic | 25.0% |
! | ATTCTCAATGCAAATAACAA+GGG | + | chr3_3:12556087-12556106 | Msa0442640:CDS | 25.0% |
! | TTTCCTTTGTATTGCTTTAA+TGG | + | chr3_3:12556354-12556373 | Msa0442640:intron | 25.0% |
! | TTCCTTTGTATTGCTTTAAT+GGG | + | chr3_3:12556355-12556374 | Msa0442640:intron | 25.0% |
! | ATTATCATAGAATACCATAG+TGG | + | chr3_3:12556559-12556578 | Msa0442640:intron | 25.0% |
! | TTATCATAGAATACCATAGT+GGG | + | chr3_3:12556560-12556579 | Msa0442640:intron | 25.0% |
! | ATTAAAGTTTGAGCTACAAT+AGG | + | chr3_3:12556605-12556624 | Msa0442640:intron | 25.0% |
! | TTAAAGTTTGAGCTACAATA+GGG | + | chr3_3:12556606-12556625 | Msa0442640:intron | 25.0% |
! | AATTTAGGTACTACATGAAA+TGG | + | chr3_3:12556675-12556694 | Msa0442640:intron | 25.0% |
!! | ACAATAGAATATACTTTTGC+CGG | + | chr3_3:12556794-12556813 | Msa0442640:intron | 25.0% |
! | AAAATGTACAATGTCATTGT+TGG | + | chr3_3:12556819-12556838 | Msa0442640:intron | 25.0% |
! | TTTCCAATTCCATAAAGTAT+TGG | + | chr3_3:12556851-12556870 | Msa0442640:intron | 25.0% |
!! | TTCCAATTCCATAAAGTATT+GGG | + | chr3_3:12556852-12556871 | Msa0442640:intron | 25.0% |
! | TTAAATGTCCCAATACTTTA+TGG | - | chr3_3:12556863-12556882 | None:intergenic | 25.0% |
! | TAATCCATTTGTGATTATGA+AGG | - | chr3_3:12556915-12556934 | None:intergenic | 25.0% |
!! | TTCATAATCACAAATGGATT+AGG | + | chr3_3:12556914-12556933 | Msa0442640:intron | 25.0% |
! | TTATACATAGTCCATTTAAC+AGG | - | chr3_3:12556969-12556988 | None:intergenic | 25.0% |
! | GTAAAAAGTAACTTCTGTTA+TGG | - | chr3_3:12557087-12557106 | None:intergenic | 25.0% |
! | AAATATATATACCTTTGGGT+TGG | - | chr3_3:12557127-12557146 | None:intergenic | 25.0% |
!!! | ATGATTAATTTGTTTGTGGA+AGG | - | chr3_3:12557156-12557175 | None:intergenic | 25.0% |
! | AAGGTGATTGAAAATTAAGA+AGG | + | chr3_3:12557445-12557464 | Msa0442640:intron | 25.0% |
!!! | ACTTTTTTTTGTTGACACAA+TGG | - | chr3_3:12557683-12557702 | None:intergenic | 25.0% |
! | AGATCTAATATATACATGGT+AGG | - | chr3_3:12557853-12557872 | None:intergenic | 25.0% |
!!! | GTTTTTGCTCTTTTTTTTTG+TGG | - | chr3_3:12558063-12558082 | None:intergenic | 25.0% |
! | ATACACGCTAATAAATTAGA+AGG | - | chr3_3:12558202-12558221 | None:intergenic | 25.0% |
! | AAAAAAAAAGTAGGTTGTTG+GGG | - | chr3_3:12558345-12558364 | None:intergenic | 25.0% |
! | CAAAAAAAAAGTAGGTTGTT+GGG | - | chr3_3:12558346-12558365 | None:intergenic | 25.0% |
! | TACTTGACCAAAAAAAAAGT+AGG | - | chr3_3:12558354-12558373 | None:intergenic | 25.0% |
!!! | TTTTTTGTCTATTAACCTAG+TGG | - | chr3_3:12558536-12558555 | None:intergenic | 25.0% |
!!! | AATTTTGATGTGAGTATTGT+TGG | + | chr3_3:12558694-12558713 | Msa0442640:intron | 25.0% |
!!! | ATTTTGATGTGAGTATTGTT+GGG | + | chr3_3:12558695-12558714 | Msa0442640:intron | 25.0% |
!!! | TAATGTCTTTATGTTTTAGG+CGG | - | chr3_3:12558823-12558842 | None:intergenic | 25.0% |
! | TTACTCATTCATATATGATG+TGG | + | chr3_3:12558878-12558897 | Msa0442640:intron | 25.0% |
! | TACTCATTCATATATGATGT+GGG | + | chr3_3:12558879-12558898 | Msa0442640:intron | 25.0% |
!!! | TTTTTATATGGAGTTTTAGG+TGG | - | chr3_3:12559114-12559133 | None:intergenic | 25.0% |
!!! | GAAATTTGGAGTTTGAATTT+TGG | - | chr3_3:12559173-12559192 | None:intergenic | 25.0% |
! | AAACGAAACTGAGTATAAAA+AGG | - | chr3_3:12559372-12559391 | None:intergenic | 25.0% |
! | TATGGCTTTCATAAAATGTT+TGG | - | chr3_3:12553200-12553219 | None:intergenic | 25.0% |
!! | TGTATAACTCTTTAACTTTG+AGG | + | chr3_3:12553315-12553334 | Msa0442640:intron | 25.0% |
!! | AGCAACAATATTTGATTTAC+AGG | - | chr3_3:12553416-12553435 | None:intergenic | 25.0% |
!!! | TTGTTGGTTGTTTTTATGTT+TGG | + | chr3_3:12559918-12559937 | Msa0442640:intron | 25.0% |
!!! | AACGAAAACAAGTGTTTTTT+GGG | - | chr3_3:12560429-12560448 | None:intergenic | 25.0% |
! | TGAGTTACATTTATATGTTG+CGG | + | chr3_3:12560515-12560534 | Msa0442640:intron | 25.0% |
!! | TCTTTTAATATCTGAACTGT+TGG | + | chr3_3:12560866-12560885 | Msa0442640:intron | 25.0% |
! | AATTACAGAAAAGGAAGTTA+AGG | + | chr3_3:12560963-12560982 | Msa0442640:CDS | 25.0% |
! | GCATTAAAAATATTCAGCTT+TGG | + | chr3_3:12561150-12561169 | Msa0442640:intron | 25.0% |
! | ACTACTTCAATACATCAAAT+TGG | + | chr3_3:12561365-12561384 | Msa0442640:intron | 25.0% |
! | CTACTTCAATACATCAAATT+GGG | + | chr3_3:12561366-12561385 | Msa0442640:intron | 25.0% |
! | TACTTCAATACATCAAATTG+GGG | + | chr3_3:12561367-12561386 | Msa0442640:intron | 25.0% |
! | CTATAATACCAAACTTCAAA+AGG | - | chr3_3:12561414-12561433 | None:intergenic | 25.0% |
! | ATGAGCTTATAACAAGATTT+GGG | + | chr3_3:12561472-12561491 | Msa0442640:CDS | 25.0% |
! | TTTGCAAAATACTATTCGTT+AGG | + | chr3_3:12561603-12561622 | Msa0442640:CDS | 25.0% |
! | AAATACTATTCGTTAGGATA+TGG | + | chr3_3:12561609-12561628 | Msa0442640:CDS | 25.0% |
! | TACCTATCTTTCAAATACAA+AGG | + | chr3_3:12561636-12561655 | Msa0442640:CDS | 25.0% |
! | ACCTATCTTTCAAATACAAA+GGG | + | chr3_3:12561637-12561656 | Msa0442640:CDS | 25.0% |
!!! | GAACAAAAATAAGGGTTTTT+TGG | - | chr3_3:12561876-12561895 | None:intergenic | 25.0% |
!! | GCGATTTTTGAACAAAAATA+AGG | - | chr3_3:12561885-12561904 | None:intergenic | 25.0% |
!! | GGGATTTCCTAATTTTATAA+CGG | + | chr3_3:12562145-12562164 | Msa0442640:CDS | 25.0% |
! | TTGTTGTCCGTTATAAAATT+AGG | - | chr3_3:12562155-12562174 | None:intergenic | 25.0% |
!! | ACTATTTCTTTTGTGTGATC+TGG | - | chr3_3:12553232-12553251 | None:intergenic | 30.0% |
! | ATGTTTGGAATCATTGTTGT+GGG | - | chr3_3:12553828-12553847 | None:intergenic | 30.0% |
CTGTAGAATTCTCATAAATG+TGG | + | chr3_3:12553887-12553906 | Msa0442640:intron | 30.0% | |
TCAATCAAACTTCAAAAGAG+GGG | - | chr3_3:12553915-12553934 | None:intergenic | 30.0% | |
GATCAATCAAACTTCAAAAG+AGG | - | chr3_3:12553917-12553936 | None:intergenic | 30.0% | |
CTCATCAGTTATACTACTAT+AGG | - | chr3_3:12553939-12553958 | None:intergenic | 30.0% | |
! | ATGTTTTCCTTAGCAACAAT+TGG | + | chr3_3:12554086-12554105 | Msa0442640:CDS | 30.0% |
!!! | GATCGAAAATAAGGGTTTTT+TGG | - | chr3_3:12554318-12554337 | None:intergenic | 30.0% |
!! | CGGATTTTGATCGAAAATAA+GGG | - | chr3_3:12554326-12554345 | None:intergenic | 30.0% |
!! | ACGGATTTTGATCGAAAATA+AGG | - | chr3_3:12554327-12554346 | None:intergenic | 30.0% |
! | TACTTTTCAGCAAAACTAGA+AGG | - | chr3_3:12554459-12554478 | None:intergenic | 30.0% |
! | TGGATTTGGTAAATTTGCAA+GGG | + | chr3_3:12554584-12554603 | Msa0442640:CDS | 30.0% |
TTATGCATTAAGTTCACCAA+CGG | - | chr3_3:12554769-12554788 | None:intergenic | 30.0% | |
AATGACAGAAAAGGAAGTAA+GGG | + | chr3_3:12554847-12554866 | Msa0442640:CDS | 30.0% | |
!! | GGAATCGAAACATTTTAAGA+AGG | + | chr3_3:12554868-12554887 | Msa0442640:CDS | 30.0% |
ACTATCTCTTTGTCATGAAT+GGG | - | chr3_3:12554908-12554927 | None:intergenic | 30.0% | |
TACTATCTCTTTGTCATGAA+TGG | - | chr3_3:12554909-12554928 | None:intergenic | 30.0% | |
!!! | CATATGTGATTTGGTTTTGA+AGG | + | chr3_3:12554989-12555008 | Msa0442640:intron | 30.0% |
AGCATGAAAATATTCAGCTT+TGG | + | chr3_3:12555115-12555134 | Msa0442640:intron | 30.0% | |
ATTTGTCTATGTCTCTGATT+TGG | + | chr3_3:12555138-12555157 | Msa0442640:intron | 30.0% | |
CTAGACACATACATTTGATT+TGG | - | chr3_3:12555287-12555306 | None:intergenic | 30.0% | |
CTATAATACGGAACTTCAAA+AGG | - | chr3_3:12555378-12555397 | None:intergenic | 30.0% | |
! | AATCTTGTTATGAACTCATC+CGG | - | chr3_3:12555435-12555454 | None:intergenic | 30.0% |
GATGAGTTCATAACAAGATT+TGG | + | chr3_3:12555435-12555454 | Msa0442640:CDS | 30.0% | |
TACTTCTATGAAAAGTTCCA+GGG | + | chr3_3:12555725-12555744 | Msa0442640:CDS | 30.0% | |
!!! | GAAGAAAAGTAAGGGTTTTT+TGG | - | chr3_3:12555840-12555859 | None:intergenic | 30.0% |
AATTTCTAAGCGAAATCTTG+TGG | + | chr3_3:12555863-12555882 | Msa0442640:CDS | 30.0% | |
CATTCTCAATGCAAATAACA+AGG | + | chr3_3:12556086-12556105 | Msa0442640:CDS | 30.0% | |
TTCTCAATGCAAATAACAAG+GGG | + | chr3_3:12556088-12556107 | Msa0442640:CDS | 30.0% | |
! | GGGATTTTCGAAATTTCTAA+AGG | + | chr3_3:12556108-12556127 | Msa0442640:CDS | 30.0% |
!! | TTGTGTATTTGAGTTGATCA+AGG | + | chr3_3:12556156-12556175 | Msa0442640:CDS | 30.0% |
AATACATAAGAGCCTATTAC+TGG | - | chr3_3:12556335-12556354 | None:intergenic | 30.0% | |
ATCCCATTAAAGCAATACAA+AGG | - | chr3_3:12556360-12556379 | None:intergenic | 30.0% | |
! | TTGCTTTAATGGGATGTTTT+TGG | + | chr3_3:12556365-12556384 | Msa0442640:intron | 30.0% |
ATCAGGCAACATGTAAAATT+AGG | - | chr3_3:12556490-12556509 | None:intergenic | 30.0% | |
TAATAGTCCAGCAATTTAGA+TGG | - | chr3_3:12556543-12556562 | None:intergenic | 30.0% | |
GACACAAATTTCACCTTAAT+TGG | + | chr3_3:12556630-12556649 | Msa0442640:intron | 30.0% | |
CAACTTATGTATGCCAATTA+AGG | - | chr3_3:12556646-12556665 | None:intergenic | 30.0% | |
AAGTTGTGAGTGTAGAATTT+AGG | + | chr3_3:12556660-12556679 | Msa0442640:intron | 30.0% | |
TGACATGTAGCATTCTATAT+TGG | + | chr3_3:12556737-12556756 | Msa0442640:intron | 30.0% | |
! | CAATAGAATATACTTTTGCC+GGG | + | chr3_3:12556795-12556814 | Msa0442640:intron | 30.0% |
CTATGTATAACTTGATACCA+TGG | + | chr3_3:12556979-12556998 | Msa0442640:intron | 30.0% | |
! | CATAAATGACTTTTCTCTCT+TGG | - | chr3_3:12557005-12557024 | None:intergenic | 30.0% |
CAAGAGAGAAAAGTCATTTA+TGG | + | chr3_3:12557003-12557022 | Msa0442640:intron | 30.0% | |
ACAATTAGTAAGGCTTGATA+TGG | + | chr3_3:12557338-12557357 | Msa0442640:intron | 30.0% | |
! | GGAGATTGATTCAATTGTTA+AGG | + | chr3_3:12557489-12557508 | Msa0442640:intron | 30.0% |
! | AGAGTAAAGTTTTTGCTTGT+TGG | - | chr3_3:12557969-12557988 | None:intergenic | 30.0% |
GACAATGCATAATATATGCA+AGG | + | chr3_3:12558018-12558037 | Msa0442640:intron | 30.0% | |
!!! | TTGCTCTTTTTTTTTGTGGT+CGG | - | chr3_3:12558059-12558078 | None:intergenic | 30.0% |
ATATATTGAGAGTCCAAGTT+TGG | - | chr3_3:12558167-12558186 | None:intergenic | 30.0% | |
! | GATAAGCATTGTTATATGCA+GGG | + | chr3_3:12558306-12558325 | Msa0442640:intron | 30.0% |
! | ATAAGCATTGTTATATGCAG+GGG | + | chr3_3:12558307-12558326 | Msa0442640:intron | 30.0% |
CCAAAAAAAAAGTAGGTTGT+TGG | - | chr3_3:12558347-12558366 | None:intergenic | 30.0% | |
!!! | CCAACAACCTACTTTTTTTT+TGG | + | chr3_3:12558344-12558363 | Msa0442640:intron | 30.0% |
ACAATTTAATTGTGGAGAAG+TGG | + | chr3_3:12558394-12558413 | Msa0442640:intron | 30.0% | |
!! | TTTTGATGTGAGTATTGTTG+GGG | + | chr3_3:12558696-12558715 | Msa0442640:intron | 30.0% |
GAAACTGAGTATAAAAAGGA+GGG | - | chr3_3:12559368-12559387 | None:intergenic | 30.0% | |
! | CAATATTTGATTTACAGGAG+AGG | - | chr3_3:12559873-12559892 | None:intergenic | 30.0% |
! | TGTTTGGACTAATTTGTGTA+TGG | - | chr3_3:12559988-12560007 | None:intergenic | 30.0% |
! | ATGTTTTCCTTAGCAACAAT+TGG | + | chr3_3:12554086-12554105 | Msa0442640:CDS | 30.0% |
TTTCTTATCCATTCCAAACT+CGG | + | chr3_3:12560326-12560345 | Msa0442640:CDS | 30.0% | |
!!! | GAACGAAAACAAGTGTTTTT+TGG | - | chr3_3:12560430-12560449 | None:intergenic | 30.0% |
!!! | TGATAATTTTGGAGCATGAA+CGG | - | chr3_3:12560615-12560634 | None:intergenic | 30.0% |
TTCATGCTCCAAAATTATCA+AGG | + | chr3_3:12560615-12560634 | Msa0442640:CDS | 30.0% | |
!! | ACTGCTTTCCTTGATAATTT+TGG | - | chr3_3:12560626-12560645 | None:intergenic | 30.0% |
AAAATTATCAAGGAAAGCAG+TGG | + | chr3_3:12560625-12560644 | Msa0442640:CDS | 30.0% | |
AAATTATCAAGGAAAGCAGT+GGG | + | chr3_3:12560626-12560645 | Msa0442640:CDS | 30.0% | |
TGGATTCTATAGATTTGGAA+GGG | + | chr3_3:12560701-12560720 | Msa0442640:CDS | 30.0% | |
AAGGGAAAACAATCTATCAA+AGG | + | chr3_3:12560719-12560738 | Msa0442640:CDS | 30.0% | |
! | TTCCTTTTCTGTAATTGACT+GGG | - | chr3_3:12560959-12560978 | None:intergenic | 30.0% |
ACTATCTCTTTGTCATGAAT+GGG | - | chr3_3:12554908-12554927 | None:intergenic | 30.0% | |
TACTATCTCTTTGTCATGAA+TGG | - | chr3_3:12554909-12554928 | None:intergenic | 30.0% | |
CTAGACACCAATATTTGATT+TGG | - | chr3_3:12561323-12561342 | None:intergenic | 30.0% | |
AATACCAAACTTCAAAAGGA+GGG | - | chr3_3:12561410-12561429 | None:intergenic | 30.0% | |
TAATACCAAACTTCAAAAGG+AGG | - | chr3_3:12561411-12561430 | None:intergenic | 30.0% | |
! | AATCTTGTTATAAGCTCATC+TGG | - | chr3_3:12561471-12561490 | None:intergenic | 30.0% |
GATGAGCTTATAACAAGATT+TGG | + | chr3_3:12561471-12561490 | Msa0442640:CDS | 30.0% | |
AAAATGAGATTGAAGAAACG+CGG | + | chr3_3:12555510-12555529 | Msa0442640:CDS | 30.0% | |
! | ACATTTTCTTTTGCAACGAA+TGG | + | chr3_3:12561574-12561593 | Msa0442640:CDS | 30.0% |
TCCCTTTGTATTTGAAAGAT+AGG | - | chr3_3:12561641-12561660 | None:intergenic | 30.0% | |
!!! | GTAACACTTGAAGTTTTGAA+TGG | - | chr3_3:12561717-12561736 | None:intergenic | 30.0% |
TTCAAAACTTCAAGTGTTAC+TGG | + | chr3_3:12561717-12561736 | Msa0442640:CDS | 30.0% | |
!!! | GTTTTTTGGGTTGAATTCAT+TGG | - | chr3_3:12561862-12561881 | None:intergenic | 30.0% |
AATGGATGAGATCAATTTAG+TGG | - | chr3_3:12561985-12562004 | None:intergenic | 30.0% | |
! | ACTGTTTTCCATCAGAATTT+TGG | - | chr3_3:12562070-12562089 | None:intergenic | 30.0% |
AAAATTCTGATGGAAAACAG+TGG | + | chr3_3:12562069-12562088 | Msa0442640:CDS | 30.0% | |
AAATTCTGATGGAAAACAGT+GGG | + | chr3_3:12562070-12562089 | Msa0442640:CDS | 30.0% | |
! | AAATGTTTGGAGTCTTTCTC+CGG | - | chr3_3:12553187-12553206 | None:intergenic | 35.0% |
! | TTTCTTTTGTGTGATCTGGA+GGG | - | chr3_3:12553228-12553247 | None:intergenic | 35.0% |
! | ATTTCTTTTGTGTGATCTGG+AGG | - | chr3_3:12553229-12553248 | None:intergenic | 35.0% |
! | CTACACACAGTTTAGTTTAC+AGG | - | chr3_3:12553367-12553386 | None:intergenic | 35.0% |
CGAAATTGATTGACACGTTT+AGG | - | chr3_3:12553784-12553803 | None:intergenic | 35.0% | |
! | CATGTTTGGAATCATTGTTG+TGG | - | chr3_3:12553829-12553848 | None:intergenic | 35.0% |
GTCTCAGTTAAGTACATGTT+TGG | - | chr3_3:12553843-12553862 | None:intergenic | 35.0% | |
TTAACTGAGACTCTGAATGA+GGG | + | chr3_3:12553852-12553871 | Msa0442640:intron | 35.0% | |
!!! | GTTTTTTGGGTTGAATTCAC+TGG | - | chr3_3:12554304-12554323 | None:intergenic | 35.0% |
! | ATTTTCGATCAAAATCCGTC+AGG | + | chr3_3:12554328-12554347 | Msa0442640:CDS | 35.0% |
! | TTTTCGATCAAAATCCGTCA+GGG | + | chr3_3:12554329-12554348 | Msa0442640:CDS | 35.0% |
! | GCAGTAAGGATTTTACTTTC+TGG | + | chr3_3:12554360-12554379 | Msa0442640:intron | 35.0% |
!! | TGAAAAGTATCTGACCCTAA+AGG | + | chr3_3:12554470-12554489 | Msa0442640:CDS | 35.0% |
!!! | TGTGAATTTTGGAGCTTGAA+CGG | - | chr3_3:12554498-12554517 | None:intergenic | 35.0% |
TTCAAGCTCCAAAATTCACA+AGG | + | chr3_3:12554498-12554517 | Msa0442640:CDS | 35.0% | |
! | ACTGCTTTCCTTGTGAATTT+TGG | - | chr3_3:12554509-12554528 | None:intergenic | 35.0% |
AAAATTCACAAGGAAAGCAG+TGG | + | chr3_3:12554508-12554527 | Msa0442640:CDS | 35.0% | |
AAATTCACAAGGAAAGCAGT+GGG | + | chr3_3:12554509-12554528 | Msa0442640:CDS | 35.0% | |
AAGATCACACATGCGAATAA+CGG | + | chr3_3:12554560-12554579 | Msa0442640:CDS | 35.0% | |
! | GTGGATTTGGTAAATTTGCA+AGG | + | chr3_3:12554583-12554602 | Msa0442640:CDS | 35.0% |
!! | TTCCTTTTCTGTCATTGACT+GGG | - | chr3_3:12554843-12554862 | None:intergenic | 35.0% |
CAATGACAGAAAAGGAAGTA+AGG | + | chr3_3:12554846-12554865 | Msa0442640:CDS | 35.0% | |
ACAGTAACTCACAACAGAAA+GGG | - | chr3_3:12554937-12554956 | None:intergenic | 35.0% | |
AATACGGAACTTCAAAAGGA+GGG | - | chr3_3:12555374-12555393 | None:intergenic | 35.0% | |
TAATACGGAACTTCAAAAGG+AGG | - | chr3_3:12555375-12555394 | None:intergenic | 35.0% | |
! | TTTCTTTTACAACGAATGGC+AGG | + | chr3_3:12555542-12555561 | Msa0442640:CDS | 35.0% |
! | CTGGAACTTTTCATAGAAGT+AGG | - | chr3_3:12555726-12555745 | None:intergenic | 35.0% |
CTACTTCTATGAAAAGTTCC+AGG | + | chr3_3:12555724-12555743 | Msa0442640:CDS | 35.0% | |
! | ACAGCTTTCCTTGAGAATTT+TGG | - | chr3_3:12556033-12556052 | None:intergenic | 35.0% |
AAAATTCTCAAGGAAAGCTG+TGG | + | chr3_3:12556032-12556051 | Msa0442640:CDS | 35.0% | |
AATAATCTCCATGTGTCAGA+TGG | - | chr3_3:12556138-12556157 | None:intergenic | 35.0% | |
! | ATTGTGACTTTTAGCACAAC+CGG | - | chr3_3:12556187-12556206 | None:intergenic | 35.0% |
AAAAGTCACAATGTTTCGTG+CGG | + | chr3_3:12556195-12556214 | Msa0442640:CDS | 35.0% | |
!!! | AATGGGATGTTTTTGGCTTT+TGG | + | chr3_3:12556372-12556391 | Msa0442640:intron | 35.0% |
! | ACCTTAGCTTGATGAATTGT+TGG | + | chr3_3:12556421-12556440 | Msa0442640:intron | 35.0% |
TCCAACAATTCATCAAGCTA+AGG | - | chr3_3:12556425-12556444 | None:intergenic | 35.0% | |
TGCAATCAATGCTAGAGATT+AGG | + | chr3_3:12556515-12556534 | Msa0442640:intron | 35.0% | |
TTAGGTTCCATCTAAATTGC+TGG | + | chr3_3:12556533-12556552 | Msa0442640:intron | 35.0% | |
ATGTAGCATTCTATATTGGC+AGG | + | chr3_3:12556741-12556760 | Msa0442640:intron | 35.0% | |
! | ATGACATTGTACATTTTGCC+CGG | - | chr3_3:12556816-12556835 | None:intergenic | 35.0% |
GTCCCAATACTTTATGGAAT+TGG | - | chr3_3:12556857-12556876 | None:intergenic | 35.0% | |
GTGTCCTTCATAATCACAAA+TGG | + | chr3_3:12556908-12556927 | Msa0442640:intron | 35.0% | |
ATCTACACAAGCCTGTTAAA+TGG | + | chr3_3:12556955-12556974 | Msa0442640:intron | 35.0% | |
TTGCCAATATGTGTCAATTG+TGG | + | chr3_3:12557305-12557324 | Msa0442640:intron | 35.0% | |
TGCCAATATGTGTCAATTGT+GGG | + | chr3_3:12557306-12557325 | Msa0442640:intron | 35.0% | |
TCTTTAGATATGTCCTAGAG+AGG | + | chr3_3:12557588-12557607 | Msa0442640:intron | 35.0% | |
TGCATAATATATGCAAGGTC+AGG | + | chr3_3:12558023-12558042 | Msa0442640:intron | 35.0% | |
GCATAATATATGCAAGGTCA+GGG | + | chr3_3:12558024-12558043 | Msa0442640:intron | 35.0% | |
CATAATATATGCAAGGTCAG+GGG | + | chr3_3:12558025-12558044 | Msa0442640:intron | 35.0% | |
!!! | TGCTCTTTTTTTTTGTGGTC+GGG | - | chr3_3:12558058-12558077 | None:intergenic | 35.0% |
! | GGATAAGCATTGTTATATGC+AGG | + | chr3_3:12558305-12558324 | Msa0442640:intron | 35.0% |
!! | TTTTTGGTCAAGTAGTCTAG+TGG | + | chr3_3:12558360-12558379 | Msa0442640:intron | 35.0% |
GAGCTCACACAATTTAATTG+TGG | + | chr3_3:12558386-12558405 | Msa0442640:intron | 35.0% | |
! | AAGTGAATAAGTAGGGTGTT+GGG | - | chr3_3:12558496-12558515 | None:intergenic | 35.0% |
AAAGTGAATAAGTAGGGTGT+TGG | - | chr3_3:12558497-12558516 | None:intergenic | 35.0% | |
! | AAAAGTGACTTTTAGCCACT+AGG | + | chr3_3:12558518-12558537 | Msa0442640:intron | 35.0% |
TATAGTGAGCTTAACTCAGT+TGG | + | chr3_3:12558596-12558615 | Msa0442640:intron | 35.0% | |
!! | TTATATTTTAGGCGGAGATG+TGG | - | chr3_3:12558778-12558797 | None:intergenic | 35.0% |
! | GGCTTTGATACCATTTGTTA+GGG | + | chr3_3:12559004-12559023 | Msa0442640:intron | 35.0% |
CGAAACTGAGTATAAAAAGG+AGG | - | chr3_3:12559369-12559388 | None:intergenic | 35.0% | |
! | AAATGTTTGGAGTCTTTCTC+CGG | - | chr3_3:12553187-12553206 | None:intergenic | 35.0% |
! | ACTATTTCTTTGGTGTGATC+TGG | - | chr3_3:12559736-12559755 | None:intergenic | 35.0% |
!!! | GTTTTTTGGGTTGATTCCAT+TGG | - | chr3_3:12560416-12560435 | None:intergenic | 35.0% |
!!! | ATTCGCATTGCTGATTTTCT+TGG | - | chr3_3:12560675-12560694 | None:intergenic | 35.0% |
! | ACGAGTGGATTCTATAGATT+TGG | + | chr3_3:12560696-12560715 | Msa0442640:CDS | 35.0% |
GTGGATTCTATAGATTTGGA+AGG | + | chr3_3:12560700-12560719 | Msa0442640:CDS | 35.0% | |
! | CTTCCTTTTCTGTAATTGAC+TGG | - | chr3_3:12560960-12560979 | None:intergenic | 35.0% |
GGAATCCAAACATTTCAAGA+AGG | + | chr3_3:12560984-12561003 | Msa0442640:CDS | 35.0% | |
TATGGCCTTCTTGAAATGTT+TGG | - | chr3_3:12560992-12561011 | None:intergenic | 35.0% | |
TTGTCAATGTCTCTGTGATT+TGG | + | chr3_3:12561175-12561194 | Msa0442640:intron | 35.0% | |
! | AAACTGTGTCATTGGATTGT+TGG | + | chr3_3:12561216-12561235 | Msa0442640:intron | 35.0% |
TCTAACTTGGAGGTTGTATT+TGG | - | chr3_3:12561253-12561272 | None:intergenic | 35.0% | |
! | TAGTTTCAGTTCTAACTTGG+AGG | - | chr3_3:12561263-12561282 | None:intergenic | 35.0% |
TCCAAGTTAGAACTGAAACT+AGG | + | chr3_3:12561262-12561281 | Msa0442640:intron | 35.0% | |
GACGTGTCCAAATCAAATAT+TGG | + | chr3_3:12561313-12561332 | Msa0442640:intron | 35.0% | |
TTGAAACAAGTGAGTGTCAT+GGG | + | chr3_3:12561784-12561803 | Msa0442640:CDS | 35.0% | |
TACTTCACAGCAAAATCACA+AGG | - | chr3_3:12562020-12562039 | None:intergenic | 35.0% | |
!!! | TCAGAATTTTGGAGCTTTGT+AGG | - | chr3_3:12562059-12562078 | None:intergenic | 35.0% |
ACAAAGCTCCAAAATTCTGA+TGG | + | chr3_3:12562059-12562078 | Msa0442640:CDS | 35.0% | |
! | TTCTTTTGTGTGATCTGGAG+GGG | - | chr3_3:12553227-12553246 | None:intergenic | 40.0% |
! | CACAGTTTAGTTTACAGGAG+AGG | - | chr3_3:12553362-12553381 | None:intergenic | 40.0% |
! | TTTGGAATCATTGTTGTGGG+AGG | - | chr3_3:12553825-12553844 | None:intergenic | 40.0% |
CTTAACTGAGACTCTGAATG+AGG | + | chr3_3:12553851-12553870 | Msa0442640:intron | 40.0% | |
GAAATGGGACTGAAGAAATG+TGG | + | chr3_3:12554058-12554077 | Msa0442640:CDS | 40.0% | |
ACTGTTGCCAATTGTTGCTA+AGG | - | chr3_3:12554096-12554115 | None:intergenic | 40.0% | |
TTTCGATCAAAATCCGTCAG+GGG | + | chr3_3:12554330-12554349 | Msa0442640:CDS | 40.0% | |
AGAAGGAACATACTGCACAA+TGG | - | chr3_3:12554442-12554461 | None:intergenic | 40.0% | |
AGATCACACATGCGAATAAC+GGG | + | chr3_3:12554561-12554580 | Msa0442640:CDS | 40.0% | |
ATGTGTTTGAGCTGATCAAG+AGG | + | chr3_3:12554634-12554653 | Msa0442640:CDS | 40.0% | |
GCTGTAACAAGTAGTACAAC+AGG | - | chr3_3:12554663-12554682 | None:intergenic | 40.0% | |
! | ACTTGTTACAGCGATTTGCA+CGG | + | chr3_3:12554671-12554690 | Msa0442640:CDS | 40.0% |
! | TCTTTTAGTGTCTGAACCGT+TGG | + | chr3_3:12554750-12554769 | Msa0442640:intron | 40.0% |
! | CTTCCTTTTCTGTCATTGAC+TGG | - | chr3_3:12554844-12554863 | None:intergenic | 40.0% |
GACAGTAACTCACAACAGAA+AGG | - | chr3_3:12554938-12554957 | None:intergenic | 40.0% | |
ATAACTCGAAACTGTGACGT+TGG | + | chr3_3:12555014-12555033 | Msa0442640:intron | 40.0% | |
AAAGGAGGGTAACATGTTTG+AGG | - | chr3_3:12555360-12555379 | None:intergenic | 40.0% | |
GTTATCACTGCAGAGAATTC+CGG | + | chr3_3:12555413-12555432 | Msa0442640:intron | 40.0% | |
! | ATTTTCCAATCACGACCATC+GGG | - | chr3_3:12555495-12555514 | None:intergenic | 40.0% |
! | CATTTTCCAATCACGACCAT+CGG | - | chr3_3:12555496-12555515 | None:intergenic | 40.0% |
TTGAAACAAGTGGCAGTCAA+GGG | + | chr3_3:12555748-12555767 | Msa0442640:CDS | 40.0% | |
! | ACATGCCTTTAAAAGTGCAG+AGG | + | chr3_3:12555794-12555813 | Msa0442640:CDS | 40.0% |
! | AGCATCCTCTGCACTTTTAA+AGG | - | chr3_3:12555802-12555821 | None:intergenic | 40.0% |
!!! | TGAGAATTTTGGAGTGCGAT+TGG | - | chr3_3:12556022-12556041 | None:intergenic | 40.0% |
ATCGCACTCCAAAATTCTCA+AGG | + | chr3_3:12556022-12556041 | Msa0442640:CDS | 40.0% | |
! | ATTACTGGTTGATGCAATCC+AGG | - | chr3_3:12556320-12556339 | None:intergenic | 40.0% |
GGATTGCATCAACCAGTAAT+AGG | + | chr3_3:12556320-12556339 | Msa0442640:intron | 40.0% | |
!! | GCATTGATTGCAACTTCATC+AGG | - | chr3_3:12556507-12556526 | None:intergenic | 40.0% |
! | ATGCAGCAATTTTCCCACTA+TGG | - | chr3_3:12556576-12556595 | None:intergenic | 40.0% |
AACCAAATTCTCCAACCCAA+AGG | + | chr3_3:12557113-12557132 | Msa0442640:intron | 40.0% | |
!! | TACCTTTGGGTTGGAGAATT+TGG | - | chr3_3:12557118-12557137 | None:intergenic | 40.0% |
GTTCTAACAGACCTTCTACA+TGG | + | chr3_3:12557230-12557249 | Msa0442640:intron | 40.0% | |
TAACAGACCTTCTACATGGT+TGG | + | chr3_3:12557234-12557253 | Msa0442640:intron | 40.0% | |
AACAGACCTTCTACATGGTT+GGG | + | chr3_3:12557235-12557254 | Msa0442640:intron | 40.0% | |
!! | GGAAGTGTCTCTGAGTTAAT+AGG | + | chr3_3:12557279-12557298 | Msa0442640:intron | 40.0% |
CAATATGTGTCAATTGTGGG+CGG | + | chr3_3:12557309-12557328 | Msa0442640:intron | 40.0% | |
GCGGTGGAAAACAATTAGTA+AGG | + | chr3_3:12557328-12557347 | Msa0442640:intron | 40.0% | |
!! | ATTATGTTTTGGGCCTCTCT+AGG | - | chr3_3:12557604-12557623 | None:intergenic | 40.0% |
! | TTTTGTTGACACAATGGCAG+TGG | - | chr3_3:12557677-12557696 | None:intergenic | 40.0% |
!!! | GCTCTTTTTTTTTGTGGTCG+GGG | - | chr3_3:12558057-12558076 | None:intergenic | 40.0% |
!! | TCTGCTGCAGGATGTTTTAA+GGG | - | chr3_3:12558116-12558135 | None:intergenic | 40.0% |
! | TTCTGCTGCAGGATGTTTTA+AGG | - | chr3_3:12558117-12558136 | None:intergenic | 40.0% |
! | TACATTTTATATGCAGGGGC+CGG | - | chr3_3:12558439-12558458 | None:intergenic | 40.0% |
!! | AGTGAATAAGTAGGGTGTTG+GGG | - | chr3_3:12558495-12558514 | None:intergenic | 40.0% |
! | GGATTTTGCAAGACAACATG+AGG | + | chr3_3:12558573-12558592 | Msa0442640:intron | 40.0% |
! | TGAGCTTAACTCAGTTGGTA+AGG | + | chr3_3:12558601-12558620 | Msa0442640:intron | 40.0% |
ATGCAACGTCATGATCACTT+TGG | + | chr3_3:12558638-12558657 | Msa0442640:intron | 40.0% | |
ACGTCATGATCACTTTGGTT+TGG | + | chr3_3:12558643-12558662 | Msa0442640:intron | 40.0% | |
! | TGAGTATTGTTGGGGAAGTT+CGG | + | chr3_3:12558704-12558723 | Msa0442640:intron | 40.0% |
TGATTCAAAAGCCACAAGAG+AGG | + | chr3_3:12558746-12558765 | Msa0442640:intron | 40.0% | |
GATTCAAAAGCCACAAGAGA+GGG | + | chr3_3:12558747-12558766 | Msa0442640:intron | 40.0% | |
!! | TGTCTTTATGTTTTAGGCGG+AGG | - | chr3_3:12558820-12558839 | None:intergenic | 40.0% |
!! | TGTTGGATTTCGAGTTTGAG+TGG | - | chr3_3:12558911-12558930 | None:intergenic | 40.0% |
CTTATGGAGGAGATTGTTGT+TGG | - | chr3_3:12558928-12558947 | None:intergenic | 40.0% | |
!! | GAGCGTGAATGGATTGTTAT+GGG | - | chr3_3:12558965-12558984 | None:intergenic | 40.0% |
!! | AGAGCGTGAATGGATTGTTA+TGG | - | chr3_3:12558966-12558985 | None:intergenic | 40.0% |
! | GGGCTTTGATACCATTTGTT+AGG | + | chr3_3:12559003-12559022 | Msa0442640:intron | 40.0% |
CTGAGTATAAAAAGGAGGGA+AGG | - | chr3_3:12559364-12559383 | None:intergenic | 40.0% | |
TAGAAACAATGAAGACTCGC+CGG | + | chr3_3:12559635-12559654 | Msa0442640:CDS | 40.0% | |
! | TTTCTTTGGTGTGATCTGGA+GGG | - | chr3_3:12559732-12559751 | None:intergenic | 40.0% |
! | ATTTCTTTGGTGTGATCTGG+AGG | - | chr3_3:12559733-12559752 | None:intergenic | 40.0% |
TCTATCTCTGATCTCTCTCT+TGG | + | chr3_3:12559767-12559786 | Msa0442640:intron | 40.0% | |
GCTTCAGCTAAGTACATGTT+TGG | - | chr3_3:12560004-12560023 | None:intergenic | 40.0% | |
ATTTCCCATTCATGACCATC+GGG | - | chr3_3:12560151-12560170 | None:intergenic | 40.0% | |
CATTTCCCATTCATGACCAT+CGG | - | chr3_3:12560152-12560171 | None:intergenic | 40.0% | |
GATGGTCATGAATGGGAAAT+GGG | + | chr3_3:12560151-12560170 | Msa0442640:CDS | 40.0% | |
GAAATGGGACTGAAGAAATG+TGG | + | chr3_3:12554058-12554077 | Msa0442640:CDS | 40.0% | |
ACTGTTGCCAATTGTTGCTA+AGG | - | chr3_3:12554096-12554115 | None:intergenic | 40.0% | |
GAGCTCAGACAGTTTATGTT+TGG | - | chr3_3:12560367-12560386 | None:intergenic | 40.0% | |
! | TGTTTTCGTTCCAAAGCCTT+TGG | + | chr3_3:12560439-12560458 | Msa0442640:CDS | 40.0% |
AGGAACATACTACACAATGG+AGG | - | chr3_3:12560556-12560575 | None:intergenic | 40.0% | |
TCCATTGTGTAGTATGTTCC+TGG | + | chr3_3:12560555-12560574 | Msa0442640:intron | 40.0% | |
ACCAGGAACATACTACACAA+TGG | - | chr3_3:12560559-12560578 | None:intergenic | 40.0% | |
!! | TGTTCCTGGTGAATTTGCTA+AGG | + | chr3_3:12560569-12560588 | Msa0442640:CDS | 40.0% |
ACAACTTTGAGCTGATCAAG+AGG | + | chr3_3:12560751-12560770 | Msa0442640:CDS | 40.0% | |
! | GTAACTTGTAACACCACAAC+AGG | - | chr3_3:12560780-12560799 | None:intergenic | 40.0% |
ACAAGTTACTGCTTCTTGCA+CGG | + | chr3_3:12560791-12560810 | Msa0442640:CDS | 40.0% | |
TGCCCAGTCAATTACAGAAA+AGG | + | chr3_3:12560954-12560973 | Msa0442640:CDS | 40.0% | |
GACAGCAACTCAAAACAGAA+AGG | - | chr3_3:12561054-12561073 | None:intergenic | 40.0% | |
ATGACTCGAAACTGTGTCAT+TGG | + | chr3_3:12561208-12561227 | Msa0442640:intron | 40.0% | |
ATTGGATTGTTGGAGACGAA+AGG | + | chr3_3:12561226-12561245 | Msa0442640:intron | 40.0% | |
! | GCCTAGTTTCAGTTCTAACT+TGG | - | chr3_3:12561266-12561285 | None:intergenic | 40.0% |
!!! | GTTACCCTCCTTTTGAAGTT+TGG | + | chr3_3:12555367-12555386 | Msa0442640:intron | 40.0% |
! | ATTTTCCAATCACGACCATC+AGG | - | chr3_3:12555495-12555514 | None:intergenic | 40.0% |
ACACTCACTTGTTTCAACCT+TGG | - | chr3_3:12561781-12561800 | None:intergenic | 40.0% | |
GTTGAAACAAGTGAGTGTCA+TGG | + | chr3_3:12561783-12561802 | Msa0442640:CDS | 40.0% | |
AAGTGAGTGTCATGGGAAAA+AGG | + | chr3_3:12561791-12561810 | Msa0442640:CDS | 40.0% | |
! | AGCATGTTTAGACACGCTTT+TGG | - | chr3_3:12561817-12561836 | None:intergenic | 40.0% |
AATCGCCAAGACGAAATATG+CGG | + | chr3_3:12561899-12561918 | Msa0442640:CDS | 40.0% | |
ACAAGGAACATACTGCACAA+TGG | - | chr3_3:12562003-12562022 | None:intergenic | 40.0% | |
! | TGGAGCTTTGTAGGAACATT+TGG | - | chr3_3:12562050-12562069 | None:intergenic | 40.0% |
ATCGTCTATGCGAATAGTGA+AGG | + | chr3_3:12562124-12562143 | Msa0442640:CDS | 40.0% | |
TCGTCTATGCGAATAGTGAA+GGG | + | chr3_3:12562125-12562144 | Msa0442640:CDS | 40.0% | |
ATTGTGACTTCTAGCACAAC+CGG | - | chr3_3:12562224-12562243 | None:intergenic | 40.0% | |
! | TCTTTTGTGTGATCTGGAGG+GGG | - | chr3_3:12553226-12553245 | None:intergenic | 45.0% |
TGGCGGAAAACTTTGAGTCA+CGG | + | chr3_3:12553718-12553737 | Msa0442640:intron | 45.0% | |
GCTAAGATTACTGTTCCCGA+TGG | + | chr3_3:12554025-12554044 | Msa0442640:CDS | 45.0% | |
ATTTCCCATTCACGACCATC+GGG | - | chr3_3:12554043-12554062 | None:intergenic | 45.0% | |
CATTTCCCATTCACGACCAT+CGG | - | chr3_3:12554044-12554063 | None:intergenic | 45.0% | |
GATGGTCGTGAATGGGAAAT+GGG | + | chr3_3:12554043-12554062 | Msa0442640:CDS | 45.0% | |
TACTGCATAAAAGCCCCTGA+CGG | - | chr3_3:12554346-12554365 | None:intergenic | 45.0% | |
! | TCAGGGGCTTTTATGCAGTA+AGG | + | chr3_3:12554346-12554365 | Msa0442640:intron | 45.0% |
GGAGGAGAGGTCAATTCAAA+TGG | - | chr3_3:12554421-12554440 | None:intergenic | 45.0% | |
AGGAACATACTGCACAATGG+AGG | - | chr3_3:12554439-12554458 | None:intergenic | 45.0% | |
GAGCTTGAACGGAACCTTTA+GGG | - | chr3_3:12554487-12554506 | None:intergenic | 45.0% | |
!! | ATGCGAATAACGGGTGGATT+TGG | + | chr3_3:12554570-12554589 | Msa0442640:CDS | 45.0% |
TTATTGCAATGCAGCCTCCA+CGG | + | chr3_3:12554807-12554826 | Msa0442640:intron | 45.0% | |
TGCCCAGTCAATGACAGAAA+AGG | + | chr3_3:12554838-12554857 | Msa0442640:CDS | 45.0% | |
TCTTTGTCATGAATGGGCGA+GGG | - | chr3_3:12554902-12554921 | None:intergenic | 45.0% | |
GCTACAATTACAGTTCCCGA+TGG | + | chr3_3:12555477-12555496 | Msa0442640:CDS | 45.0% | |
AGTTCCAGGGTTGAAACAAG+TGG | + | chr3_3:12555738-12555757 | Msa0442640:CDS | 45.0% | |
GTTGAAACAAGTGGCAGTCA+AGG | + | chr3_3:12555747-12555766 | Msa0442640:CDS | 45.0% | |
TGGAGTGCGATTGGAACATT+TGG | - | chr3_3:12556013-12556032 | None:intergenic | 45.0% | |
AAGGACAACCATCTGACACA+TGG | + | chr3_3:12556127-12556146 | Msa0442640:CDS | 45.0% | |
!! | TGAGTTGATCAAGGAGAAGC+CGG | + | chr3_3:12556165-12556184 | Msa0442640:CDS | 45.0% |
! | TGACTTTTCTCTCTTGGCCA+TGG | - | chr3_3:12556999-12557018 | None:intergenic | 45.0% |
ACAGACCTTCTACATGGTTG+GGG | + | chr3_3:12557236-12557255 | Msa0442640:intron | 45.0% | |
TACATGGTTGGGGATGAGAT+TGG | + | chr3_3:12557246-12557265 | Msa0442640:intron | 45.0% | |
CGCCCACAATTGACACATAT+TGG | - | chr3_3:12557311-12557330 | None:intergenic | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr3_3:12557996-12558015 | Msa0442640:intron | 45.0% |
!!! | CTGCAGGATGTTTTAAGGGT+TGG | - | chr3_3:12558112-12558131 | None:intergenic | 45.0% |
AAGCACAGGAAACAAGACAG+AGG | + | chr3_3:12558135-12558154 | Msa0442640:intron | 45.0% | |
ACAGAGGAACATGCCAAACT+TGG | + | chr3_3:12558151-12558170 | Msa0442640:intron | 45.0% | |
TGAGCATAGCTCAGCTAACA+GGG | + | chr3_3:12558284-12558303 | Msa0442640:intron | 45.0% | |
ATTGTTATATGCAGGGGCTG+AGG | + | chr3_3:12558313-12558332 | Msa0442640:intron | 45.0% | |
! | ACATTTTATATGCAGGGGCC+GGG | - | chr3_3:12558438-12558457 | None:intergenic | 45.0% |
! | GAGTATTGTTGGGGAAGTTC+GGG | + | chr3_3:12558705-12558724 | Msa0442640:intron | 45.0% |
AGTATTGTTGGGGAAGTTCG+GGG | + | chr3_3:12558706-12558725 | Msa0442640:intron | 45.0% | |
GGATGAACTCACACTTATGG+AGG | - | chr3_3:12558941-12558960 | None:intergenic | 45.0% | |
GGAGGATGAACTCACACTTA+TGG | - | chr3_3:12558944-12558963 | None:intergenic | 45.0% | |
!! | CGTGAATGGATTGTTATGGG+AGG | - | chr3_3:12558962-12558981 | None:intergenic | 45.0% |
TCTCTGACCAAGTCGAATCA+GGG | + | chr3_3:12558983-12559002 | Msa0442640:intron | 45.0% | |
! | ATCAAAGCCCTGATTCGACT+TGG | - | chr3_3:12558993-12559012 | None:intergenic | 45.0% |
! | ACCATTTGTTAGGGAGTCTC+TGG | + | chr3_3:12559013-12559032 | Msa0442640:intron | 45.0% |
TCCAGAGACTCCCTAACAAA+TGG | - | chr3_3:12559017-12559036 | None:intergenic | 45.0% | |
! | TTCTTTGGTGTGATCTGGAG+GGG | - | chr3_3:12559731-12559750 | None:intergenic | 45.0% |
ATGACCATCGGGAACAGTAA+TGG | - | chr3_3:12560140-12560159 | None:intergenic | 45.0% | |
TGTTCCCGATGGTCATGAAT+GGG | + | chr3_3:12560144-12560163 | Msa0442640:CDS | 45.0% | |
CGATGGTCATGAATGGGAAA+TGG | + | chr3_3:12560150-12560169 | Msa0442640:CDS | 45.0% | |
CTTATCCATTCCAAACTCGG+AGG | + | chr3_3:12560329-12560348 | Msa0442640:CDS | 45.0% | |
TTAGTCCTCCGAGTTTGGAA+TGG | - | chr3_3:12560337-12560356 | None:intergenic | 45.0% | |
TTCCAAACTCGGAGGACTAA+TGG | + | chr3_3:12560337-12560356 | Msa0442640:CDS | 45.0% | |
CTCTGCTTCCGAAAGATCAA+AGG | + | chr3_3:12560384-12560403 | Msa0442640:CDS | 45.0% | |
GGCAGCATCCTTTGATCTTT+CGG | - | chr3_3:12560395-12560414 | None:intergenic | 45.0% | |
AGATCAAAGGATGCTGCCAA+TGG | + | chr3_3:12560397-12560416 | Msa0442640:CDS | 45.0% | |
TGCTCCTTAGCAAATTCACC+AGG | - | chr3_3:12560576-12560595 | None:intergenic | 45.0% | |
TGGAGCATGAACGGAACATT+TGG | - | chr3_3:12560606-12560625 | None:intergenic | 45.0% | |
!! | GTGGGAAGTTTCTGGTGTAT+TGG | + | chr3_3:12560644-12560663 | Msa0442640:CDS | 45.0% |
TCAGCAATGCGAATTACGAG+TGG | + | chr3_3:12560681-12560700 | Msa0442640:CDS | 45.0% | |
TCTTTGTCATGAATGGGCGA+GGG | - | chr3_3:12554902-12554921 | None:intergenic | 45.0% | |
CTGCAGTGATAACAGCTCAT+TGG | - | chr3_3:12555406-12555425 | None:intergenic | 45.0% | |
GCTACAGTTACAGTTCCTGA+TGG | + | chr3_3:12561513-12561532 | Msa0442640:CDS | 45.0% | |
! | GGACTAGCACACTTTGTGTT+TGG | - | chr3_3:12561747-12561766 | None:intergenic | 45.0% |
ACACAAAGTGTGCTAGTCCT+AGG | + | chr3_3:12561748-12561767 | Msa0442640:CDS | 45.0% | |
AGTGTGCTAGTCCTAGGAAA+AGG | + | chr3_3:12561754-12561773 | Msa0442640:CDS | 45.0% | |
TAGTCCTAGGAAAAGGTCCA+AGG | + | chr3_3:12561761-12561780 | Msa0442640:CDS | 45.0% | |
! | TCAACCTTGGACCTTTTCCT+AGG | - | chr3_3:12561768-12561787 | None:intergenic | 45.0% |
ACATGCTTCTACAAGAGCAG+AGG | + | chr3_3:12561830-12561849 | Msa0442640:CDS | 45.0% | |
!!! | AGTGGGAAGTGTTTTGCATG+CGG | + | chr3_3:12562087-12562106 | Msa0442640:CDS | 45.0% |
TCGCATAGACGATGATCTGA+CGG | - | chr3_3:12562117-12562136 | None:intergenic | 45.0% | |
ACGGACAACAATCTGTCACA+TGG | + | chr3_3:12562164-12562183 | Msa0442640:CDS | 45.0% | |
TGAGCTCATCAAGAAGAAGC+CGG | + | chr3_3:12562202-12562221 | Msa0442640:CDS | 45.0% | |
!!! | AATTTCTTATTTTTTTTTAT+AGG | - | chr3_3:12557717-12557736 | None:intergenic | 5.0% |
GTGTCGGAACACATCTTCTC+CGG | - | chr3_3:12553153-12553172 | None:intergenic | 50.0% | |
TGTTCCCGATGGTCGTGAAT+GGG | + | chr3_3:12554036-12554055 | Msa0442640:CDS | 50.0% | |
CGATGGTCGTGAATGGGAAA+TGG | + | chr3_3:12554042-12554061 | Msa0442640:CDS | 50.0% | |
! | GCTCTTCTGGAAGCAGAGTT+AGG | - | chr3_3:12554270-12554289 | None:intergenic | 50.0% |
! | GGCAGCACATTTTGCTCTTC+TGG | - | chr3_3:12554283-12554302 | None:intergenic | 50.0% |
CATACTGCACAATGGAGGAG+AGG | - | chr3_3:12554434-12554453 | None:intergenic | 50.0% | |
GGAGCTTGAACGGAACCTTT+AGG | - | chr3_3:12554488-12554507 | None:intergenic | 50.0% | |
! | TCACACATGCGAATAACGGG+TGG | + | chr3_3:12554564-12554583 | Msa0442640:CDS | 50.0% |
TATTGCAATGCAGCCTCCAC+GGG | + | chr3_3:12554808-12554827 | Msa0442640:intron | 50.0% | |
ATGAATGGGCGAGGGAAGTA+TGG | - | chr3_3:12554894-12554913 | None:intergenic | 50.0% | |
CTCTTTGTCATGAATGGGCG+AGG | - | chr3_3:12554903-12554922 | None:intergenic | 50.0% | |
! | ACTGCCACTTGTTTCAACCC+TGG | - | chr3_3:12555745-12555764 | None:intergenic | 50.0% |
CTCATCCCCAACCATGTAGA+AGG | - | chr3_3:12557244-12557263 | None:intergenic | 50.0% | |
! | GATGAGATTGGCTGTGGTGA+TGG | + | chr3_3:12557258-12557277 | Msa0442640:intron | 50.0% |
TATGTGTCAATTGTGGGCGG+TGG | + | chr3_3:12557312-12557331 | Msa0442640:intron | 50.0% | |
GTGAGCATAGCTCAGCTAAC+AGG | + | chr3_3:12558283-12558302 | Msa0442640:intron | 50.0% | |
! | TGTGGAGAAGTGGAGTGTCT+AGG | + | chr3_3:12558404-12558423 | Msa0442640:intron | 50.0% |
! | GTGGAGAAGTGGAGTGTCTA+GGG | + | chr3_3:12558405-12558424 | Msa0442640:intron | 50.0% |
! | CATTTTATATGCAGGGGCCG+GGG | - | chr3_3:12558437-12558456 | None:intergenic | 50.0% |
ACCAACTGAGCTAAGCTCAC+AGG | + | chr3_3:12558467-12558486 | Msa0442640:intron | 50.0% | |
CCAACTGAGCTAAGCTCACA+GGG | + | chr3_3:12558468-12558487 | Msa0442640:intron | 50.0% | |
GTATTGTTGGGGAAGTTCGG+GGG | + | chr3_3:12558707-12558726 | Msa0442640:intron | 50.0% | |
! | ACTTGGTCAGAGAGCGTGAA+TGG | - | chr3_3:12558976-12558995 | None:intergenic | 50.0% |
CTCTCTGACCAAGTCGAATC+AGG | + | chr3_3:12558982-12559001 | Msa0442640:intron | 50.0% | |
TGGAGCGACAGGAGAAACAA+CGG | + | chr3_3:12559033-12559052 | Msa0442640:intron | 50.0% | |
GTGTCGGAACACATCTTCTC+CGG | - | chr3_3:12553153-12553172 | None:intergenic | 50.0% | |
! | TCTTTGGTGTGATCTGGAGG+GGG | - | chr3_3:12559730-12559749 | None:intergenic | 50.0% |
GCTACCATTACTGTTCCCGA+TGG | + | chr3_3:12560133-12560152 | Msa0442640:CDS | 50.0% | |
CTGTTCCCGATGGTCATGAA+TGG | + | chr3_3:12560143-12560162 | Msa0442640:CDS | 50.0% | |
CTCCATTAGTCCTCCGAGTT+TGG | - | chr3_3:12560342-12560361 | None:intergenic | 50.0% | |
TGCATAGCAGCCAAAGGCTT+TGG | - | chr3_3:12560452-12560471 | None:intergenic | 50.0% | |
GGAAAGCAGTGGGAAGTTTC+TGG | + | chr3_3:12560636-12560655 | Msa0442640:CDS | 50.0% | |
GATCAAGAGGAAGCCTGTTG+TGG | + | chr3_3:12554647-12554666 | Msa0442640:CDS | 50.0% | |
TATTGCAATGCAGCCTCCAC+AGG | + | chr3_3:12554808-12554827 | Msa0442640:intron | 50.0% | |
ATTGCAATGCAGCCTCCACA+GGG | + | chr3_3:12560925-12560944 | Msa0442640:intron | 50.0% | |
ATGAATGGGCGAGGGAAGTA+TGG | - | chr3_3:12554894-12554913 | None:intergenic | 50.0% | |
CTCTTTGTCATGAATGGGCG+AGG | - | chr3_3:12554903-12554922 | None:intergenic | 50.0% | |
CAGTTCCTGATGGTCGTGAT+TGG | + | chr3_3:12561523-12561542 | Msa0442640:CDS | 50.0% | |
CCTCACCGCATATTTCGTCT+TGG | - | chr3_3:12561907-12561926 | None:intergenic | 50.0% | |
CCAAGACGAAATATGCGGTG+AGG | + | chr3_3:12561904-12561923 | Msa0442640:intron | 50.0% | |
ATGTGTTCCGACACCGTCAC+CGG | + | chr3_3:12553159-12553178 | Msa0442640:CDS | 55.0% | |
TTGGAGTCTTTCTCCGGTGC+CGG | - | chr3_3:12553181-12553200 | None:intergenic | 55.0% | |
GTGATCTGGAGGGGGAAGTA+TGG | - | chr3_3:12553218-12553237 | None:intergenic | 55.0% | |
CTGTTCCCGATGGTCGTGAA+TGG | + | chr3_3:12554035-12554054 | Msa0442640:CDS | 55.0% | |
ATTGCAATGCAGCCTCCACG+GGG | + | chr3_3:12554809-12554828 | Msa0442640:intron | 55.0% | |
CAGTTCCCGATGGTCGTGAT+TGG | + | chr3_3:12555487-12555506 | Msa0442640:CDS | 55.0% | |
! | GTTGGGGATGAGATTGGCTG+TGG | + | chr3_3:12557252-12557271 | Msa0442640:intron | 55.0% |
CCAACTGAGCTAAGCTCACG+AGG | - | chr3_3:12557994-12558013 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | + | chr3_3:12557991-12558010 | Msa0442640:intron | 55.0% | |
! | ACATCCTGCAGCAGAAGCAC+AGG | + | chr3_3:12558121-12558140 | Msa0442640:intron | 55.0% |
GTTTCCTGTGCTTCTGCTGC+AGG | - | chr3_3:12558128-12558147 | None:intergenic | 55.0% | |
! | AGTGTCTAGGGTTCGAACCC+CGG | + | chr3_3:12558417-12558436 | Msa0442640:intron | 55.0% |
CCCTGTGAGCTTAGCTCAGT+TGG | - | chr3_3:12558471-12558490 | None:intergenic | 55.0% | |
ATGTGTTCCGACACCGTCAC+CGG | + | chr3_3:12553159-12553178 | Msa0442640:CDS | 55.0% | |
TTGGAGTCTTTCTCCGGTGC+CGG | - | chr3_3:12553181-12553200 | None:intergenic | 55.0% | |
GTGATCTGGAGGGGGAAGTA+TGG | - | chr3_3:12553218-12553237 | None:intergenic | 55.0% | |
CCTCACTGCATAGCAGCCAA+AGG | - | chr3_3:12560458-12560477 | None:intergenic | 55.0% | |
CCTTTGGCTGCTATGCAGTG+AGG | + | chr3_3:12560455-12560474 | Msa0442640:intron | 55.0% | |
!! | TCTTTCTCCGGTGCCGGTGA+CGG | - | chr3_3:12553175-12553194 | None:intergenic | 60.0% |
TGTGGCGTCTCCCTCTCTTG+TGG | - | chr3_3:12558760-12558779 | None:intergenic | 60.0% | |
!! | TAGGGAGTCTCTGGAGCGAC+AGG | + | chr3_3:12559022-12559041 | Msa0442640:intron | 60.0% |
!! | TCTTTCTCCGGTGCCGGTGA+CGG | - | chr3_3:12553175-12553194 | None:intergenic | 60.0% |
CAATGCAGCCTCCACAGGGA+AGG | + | chr3_3:12560929-12560948 | Msa0442640:intron | 60.0% | |
TGGGCAGACATTCCCCGTGG+AGG | - | chr3_3:12554824-12554843 | None:intergenic | 65.0% | |
GACTGGGCAGACATTCCCCG+TGG | - | chr3_3:12554827-12554846 | None:intergenic | 65.0% | |
TGGGCACACCTTCCCTGTGG+AGG | - | chr3_3:12560940-12560959 | None:intergenic | 65.0% | |
GACTGGGCACACCTTCCCTG+TGG | - | chr3_3:12560943-12560962 | None:intergenic | 65.0% | |
TCCGACACCGTCACCGGCAC+CGG | + | chr3_3:12553165-12553184 | Msa0442640:CDS | 70.0% | |
!! | TCCGGTGCCGGTGACGGTGT+CGG | - | chr3_3:12553169-12553188 | None:intergenic | 70.0% |
TCCGACACCGTCACCGGCAC+CGG | + | chr3_3:12553165-12553184 | Msa0442640:CDS | 70.0% | |
!! | TCCGGTGCCGGTGACGGTGT+CGG | - | chr3_3:12553169-12553188 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 12553139 | 12562271 | 12553139 | ID=Msa0442640;Name=Msa0442640 |
chr3_3 | mRNA | 12553139 | 12562271 | 12553139 | ID=Msa0442640-mRNA-1;Parent=Msa0442640;Name=Msa0442640-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.33|0.12|1|0.73|0.43|16|0|1025 |
chr3_3 | exon | 12553139 | 12553249 | 12553139 | ID=Msa0442640-mRNA-1:exon:2662;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12553974 | 12554186 | 12553974 | ID=Msa0442640-mRNA-1:exon:2663;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12554213 | 12554362 | 12554213 | ID=Msa0442640-mRNA-1:exon:2664;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12554450 | 12554692 | 12554450 | ID=Msa0442640-mRNA-1:exon:2665;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12554821 | 12554925 | 12554821 | ID=Msa0442640-mRNA-1:exon:2666;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12555426 | 12555653 | 12555426 | ID=Msa0442640-mRNA-1:exon:2667;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12555669 | 12555884 | 12555669 | ID=Msa0442640-mRNA-1:exon:2668;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12555974 | 12556216 | 12555974 | ID=Msa0442640-mRNA-1:exon:2669;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12559604 | 12559753 | 12559604 | ID=Msa0442640-mRNA-1:exon:2670;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12560082 | 12560250 | 12560082 | ID=Msa0442640-mRNA-1:exon:2671;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12560263 | 12560471 | 12560263 | ID=Msa0442640-mRNA-1:exon:2672;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12560567 | 12560812 | 12560567 | ID=Msa0442640-mRNA-1:exon:2673;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12560937 | 12561041 | 12560937 | ID=Msa0442640-mRNA-1:exon:2674;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12561462 | 12561674 | 12561462 | ID=Msa0442640-mRNA-1:exon:2675;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12561705 | 12561920 | 12561705 | ID=Msa0442640-mRNA-1:exon:2676;Parent=Msa0442640-mRNA-1 |
chr3_3 | exon | 12562011 | 12562271 | 12562011 | ID=Msa0442640-mRNA-1:exon:2677;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12553139 | 12553249 | 12553139 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12553974 | 12554186 | 12553974 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12554213 | 12554362 | 12554213 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12554450 | 12554692 | 12554450 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12554821 | 12554925 | 12554821 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12555426 | 12555653 | 12555426 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12555669 | 12555884 | 12555669 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12555974 | 12556216 | 12555974 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12559604 | 12559753 | 12559604 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12560082 | 12560250 | 12560082 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12560263 | 12560471 | 12560263 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12560567 | 12560812 | 12560567 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12560937 | 12561041 | 12560937 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12561462 | 12561674 | 12561462 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12561705 | 12561920 | 12561705 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
chr3_3 | CDS | 12562011 | 12562271 | 12562011 | ID=Msa0442640-mRNA-1:cds;Parent=Msa0442640-mRNA-1 |
Gene Sequence |
Protein sequence |