AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0442740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0442740 MtrunA17_Chr3g0080861 96.176 523 17 1 1 523 1 520 0.0 1041
Msa0442740 MtrunA17_Chr8g0354661 55.185 540 208 8 1 519 2 528 0.0 552
Msa0442740 MtrunA17_Chr3g0099131 78.261 115 25 0 37 151 41 155 2.71e-60 207
Msa0442740 MtrunA17_Chr2g0322521 71.654 127 36 0 31 157 23 149 8.53e-59 200
Msa0442740 MtrunA17_Chr1g0154031 54.491 167 69 2 37 203 76 235 7.62e-55 190
Msa0442740 MtrunA17_Chr1g0192411 59.664 119 48 0 35 153 10 128 5.71e-46 166
Msa0442740 MtrunA17_Chr5g0410961 61.321 106 41 0 35 140 10 115 4.42e-45 162
Msa0442740 MtrunA17_Chr1g0203411 64.220 109 39 0 37 145 12 120 7.91e-45 159
Msa0442740 MtrunA17_Chr2g0281071 62.500 104 39 0 37 140 13 116 2.83e-44 159
Msa0442740 MtrunA17_Chr5g0395281 62.500 104 39 0 37 140 12 115 6.37e-44 157
Msa0442740 MtrunA17_Chr4g0048511 61.538 104 40 0 37 140 13 116 1.27e-43 158
Msa0442740 MtrunA17_Chr2g0323411 60.000 110 43 1 37 145 12 121 9.21e-43 155
Msa0442740 MtrunA17_Chr4g0039971 61.538 104 40 0 37 140 13 116 9.89e-43 155
Msa0442740 MtrunA17_Chr1g0167691 61.538 104 40 0 37 140 12 115 1.29e-42 152
Msa0442740 MtrunA17_Chr1g0209661 57.547 106 45 0 37 142 27 132 2.02e-42 154
Msa0442740 MtrunA17_Chr1g0194301 60.185 108 43 0 35 142 31 138 2.63e-42 152
Msa0442740 MtrunA17_Chr8g0349261 61.905 105 39 1 37 140 13 117 9.17e-42 151
Msa0442740 MtrunA17_Chr7g0228231 58.252 103 43 0 37 139 14 116 1.01e-41 148
Msa0442740 MtrunA17_Chr4g0068061 48.227 141 65 1 35 167 10 150 1.44e-41 152
Msa0442740 MtrunA17_Chr3g0115821 59.615 104 42 0 37 140 12 115 1.66e-41 152
Msa0442740 MtrunA17_Chr3g0099141 75.904 83 20 0 37 119 40 122 1.75e-41 145
Msa0442740 MtrunA17_Chr1g0186061 57.983 119 49 1 25 142 7 125 2.10e-41 149
Msa0442740 MtrunA17_Chr8g0346561 60.377 106 42 0 35 140 10 115 2.13e-41 150
Msa0442740 MtrunA17_Chr1g0168661 55.462 119 49 1 28 142 8 126 2.84e-41 149
Msa0442740 MtrunA17_Chr1g0187761 60.577 104 41 0 37 140 12 115 3.75e-41 148
Msa0442740 MtrunA17_Chr7g0275911 61.386 101 39 0 35 135 10 110 5.42e-41 148
Msa0442740 MtrunA17_Chr7g0217221 59.434 106 43 0 37 142 12 117 6.23e-41 148
Msa0442740 MtrunA17_Chr5g0435101 57.692 104 44 0 37 140 11 114 7.32e-41 146
Msa0442740 MtrunA17_Chr7g0217741 59.434 106 43 0 35 140 10 115 8.88e-41 149
Msa0442740 MtrunA17_Chr1g0194291 59.434 106 43 0 37 142 21 126 8.89e-41 147
Msa0442740 MtrunA17_Chr6g0450101 57.282 103 44 0 37 139 14 116 1.04e-40 145
Msa0442740 MtrunA17_Chr1g0193371 59.434 106 43 0 37 142 12 117 1.05e-40 150
Msa0442740 MtrunA17_Chr1g0167661 59.615 104 42 0 37 140 12 115 1.46e-40 147
Msa0442740 MtrunA17_Chr4g0022931 58.654 104 43 0 37 140 13 116 1.53e-40 147
Msa0442740 MtrunA17_Chr4g0037141 60.784 102 40 0 39 140 14 115 1.79e-40 147
Msa0442740 MtrunA17_Chr7g0261281 59.615 104 42 0 37 140 12 115 2.08e-40 147
Msa0442740 MtrunA17_Chr4g0070641 61.616 99 38 0 37 135 12 110 2.51e-40 143
Msa0442740 MtrunA17_Chr3g0131121 61.765 102 39 0 39 140 14 115 2.76e-40 147
Msa0442740 MtrunA17_Chr4g0070611 61.616 99 38 0 37 135 12 110 4.60e-40 147
Msa0442740 MtrunA17_Chr4g0060721 59.615 104 42 0 37 140 13 116 5.38e-40 147
Msa0442740 MtrunA17_Chr6g0453211 62.626 99 37 0 37 135 12 110 6.17e-40 147
Msa0442740 MtrunA17_Chr4g0022911 56.731 104 45 0 37 140 13 116 7.55e-40 146
Msa0442740 MtrunA17_Chr3g0121241 57.547 106 45 0 35 140 40 145 7.97e-40 146
Msa0442740 MtrunA17_Chr4g0042671 59.434 106 43 0 35 140 10 115 8.14e-40 149
Msa0442740 MtrunA17_Chr4g0022901 57.692 104 44 0 37 140 13 116 8.53e-40 145
Msa0442740 MtrunA17_Chr2g0309911 56.731 104 45 0 37 140 11 114 8.84e-40 146
Msa0442740 MtrunA17_Chr6g0453471 59.434 106 43 0 35 140 10 115 9.44e-40 147
Msa0442740 MtrunA17_Chr7g0274581 53.846 104 48 0 37 140 12 115 1.35e-39 142
Msa0442740 MtrunA17_Chr7g0270891 57.547 106 45 0 37 142 12 117 2.04e-39 147
Msa0442740 MtrunA17_Chr8g0387421 58.491 106 44 0 37 142 12 117 2.10e-39 145
Msa0442740 MtrunA17_Chr2g0328771 55.660 106 47 0 37 142 20 125 2.70e-39 145
Msa0442740 MtrunA17_Chr3g0110351 55.556 108 48 0 35 142 10 117 3.26e-39 145
Msa0442740 MtrunA17_Chr1g0193801 57.547 106 45 0 37 142 12 117 3.83e-39 147
Msa0442740 MtrunA17_Chr8g0385321 57.843 102 43 0 39 140 14 115 3.93e-39 145
Msa0442740 MtrunA17_Chr7g0254411 58.491 106 44 0 35 140 10 115 4.01e-39 145
Msa0442740 MtrunA17_Chr1g0151941 54.545 110 49 1 37 145 12 121 6.06e-39 142
Msa0442740 MtrunA17_Chr7g0228891 57.407 108 46 0 35 142 10 117 6.78e-39 143
Msa0442740 MtrunA17_Chr5g0434571 55.556 108 48 0 35 142 46 153 7.27e-39 145
Msa0442740 MtrunA17_Chr2g0311221 58.586 99 41 0 37 135 14 112 1.51e-38 143
Msa0442740 MtrunA17_Chr4g0057031 56.731 104 45 0 37 140 12 115 2.12e-38 141
Msa0442740 MtrunA17_Chr3g0092401 55.660 106 47 0 37 142 13 118 2.70e-38 142
Msa0442740 MtrunA17_Chr1g0211161 56.731 104 45 0 37 140 13 116 4.60e-38 139
Msa0442740 MtrunA17_Chr3g0117091 57.692 104 44 0 37 140 12 115 4.76e-38 142
Msa0442740 MtrunA17_Chr2g0330041 55.769 104 46 0 37 140 12 115 5.42e-38 144
Msa0442740 MtrunA17_Chr8g0342541 55.769 104 46 0 37 140 12 115 7.56e-38 142
Msa0442740 MtrunA17_Chr2g0323351 57.282 103 44 0 37 139 12 114 9.42e-38 139
Msa0442740 MtrunA17_Chr4g0032401 55.660 106 47 0 37 142 17 122 1.46e-37 141
Msa0442740 MtrunA17_Chr4g0058631 56.731 104 45 0 37 140 12 115 1.80e-37 141
Msa0442740 MtrunA17_Chr8g0342521 56.731 104 45 0 37 140 12 115 2.05e-37 141
Msa0442740 MtrunA17_Chr3g0088461 56.731 104 45 0 37 140 22 125 2.54e-37 140
Msa0442740 MtrunA17_Chr6g0452271 57.692 104 44 0 37 140 12 115 2.78e-37 140
Msa0442740 MtrunA17_Chr4g0044421 55.882 102 45 0 39 140 14 115 2.92e-37 136
Msa0442740 MtrunA17_Chr7g0271241 60.204 98 39 0 37 134 12 109 3.38e-37 141
Msa0442740 MtrunA17_Chr4g0022891 55.882 102 45 0 37 138 12 113 3.93e-37 137
Msa0442740 MtrunA17_Chr5g0397231 58.586 99 41 0 37 135 12 110 4.76e-37 139
Msa0442740 MtrunA17_Chr1g0194951 56.604 106 46 0 35 140 10 115 5.43e-37 140
Msa0442740 MtrunA17_Chr4g0028311 54.630 108 48 1 37 143 12 119 5.97e-37 139
Msa0442740 MtrunA17_Chr1g0152011 57.143 105 44 1 37 140 12 116 7.36e-37 139
Msa0442740 MtrunA17_Chr5g0440781 38.372 172 89 4 38 203 13 173 1.11e-36 134
Msa0442740 MtrunA17_Chr7g0264641 49.180 122 58 2 37 154 12 133 1.62e-36 136
Msa0442740 MtrunA17_Chr5g0440761 38.372 172 89 4 38 203 13 173 1.68e-36 136
Msa0442740 MtrunA17_Chr5g0400821 56.190 105 45 1 37 140 12 116 1.89e-36 137
Msa0442740 MtrunA17_Chr5g0441141 38.372 172 89 4 38 203 13 173 2.62e-36 136
Msa0442740 MtrunA17_Chr3g0103281 55.769 104 46 0 37 140 12 115 3.70e-36 137
Msa0442740 MtrunA17_Chr2g0327351 57.000 100 42 1 37 135 12 111 6.70e-36 136
Msa0442740 MtrunA17_Chr5g0441131 47.934 121 62 1 35 154 7 127 7.93e-36 132
Msa0442740 MtrunA17_Chr5g0417821 54.808 104 47 0 37 140 7 110 8.41e-36 135
Msa0442740 MtrunA17_Chr1g0180391 50.862 116 57 0 37 152 19 134 1.19e-35 132
Msa0442740 MtrunA17_Chr8g0343831 55.882 102 45 0 39 140 10 111 1.45e-35 133
Msa0442740 MtrunA17_Chr4g0054391 58.586 99 40 1 37 134 12 110 2.51e-35 134
Msa0442740 MtrunA17_Chr3g0135311 54.286 105 47 1 37 140 12 116 3.88e-35 134
Msa0442740 MtrunA17_Chr6g0487491 49.573 117 50 2 37 144 12 128 5.65e-35 132
Msa0442740 MtrunA17_Chr8g0334881 49.533 107 53 1 37 142 10 116 7.36e-35 133
Msa0442740 MtrunA17_Chr4g0055981 55.556 99 44 0 37 135 55 153 7.63e-35 130
Msa0442740 MtrunA17_Chr2g0293911 56.311 103 45 0 37 139 24 126 8.59e-35 133
Msa0442740 MtrunA17_Chr4g0022881 51.961 102 49 0 38 139 13 114 8.74e-35 130
Msa0442740 MtrunA17_Chr7g0269831 57.547 106 45 0 35 140 10 115 9.81e-35 134
Msa0442740 MtrunA17_Chr8g0342481 46.923 130 64 3 37 161 12 141 1.17e-34 134
Msa0442740 MtrunA17_Chr2g0327821 54.808 104 47 0 37 140 6 109 1.54e-34 130
Msa0442740 MtrunA17_Chr4g0068921 55.340 103 46 0 37 139 24 126 1.72e-34 128
Msa0442740 MtrunA17_Chr4g0072751 58.000 100 41 1 37 135 12 111 1.82e-34 133
Msa0442740 MtrunA17_Chr1g0203441 55.340 103 46 0 38 140 14 116 1.95e-34 130
Msa0442740 MtrunA17_Chr4g0013361 49.533 107 53 1 37 142 10 116 4.52e-34 130
Msa0442740 MtrunA17_Chr7g0220341 45.238 126 67 1 17 140 5 130 2.19e-33 128
Msa0442740 MtrunA17_Chr5g0434931 45.736 129 68 1 12 140 12 138 2.29e-33 128
Msa0442740 MtrunA17_Chr5g0434831 51.923 104 50 0 37 140 7 110 2.62e-33 125
Msa0442740 MtrunA17_Chr4g0030881 51.327 113 48 1 36 141 6 118 5.59e-33 126
Msa0442740 MtrunA17_Chr8g0360111 55.340 103 44 1 33 135 23 123 5.69e-33 126
Msa0442740 MtrunA17_Chr5g0434911 49.038 104 53 0 37 140 21 124 1.08e-31 123
Msa0442740 MtrunA17_Chr6g0470971 51.456 103 50 0 38 140 15 117 2.05e-31 122
Msa0442740 MtrunA17_Chr7g0240821 47.748 111 53 1 33 143 2 107 3.52e-31 120
Msa0442740 MtrunA17_Chr5g0434841 50.000 104 52 0 37 140 20 123 6.67e-31 122
Msa0442740 MtrunA17_Chr7g0247131 65.333 75 26 0 69 143 10 84 1.79e-30 119
Msa0442740 MtrunA17_Chr7g0228991 49.038 104 53 0 37 140 29 132 2.60e-30 119
Msa0442740 MtrunA17_Chr5g0395221 56.098 82 36 0 32 113 7 88 1.22e-27 106
Msa0442740 MtrunA17_Chr5g0429661 48.598 107 51 3 36 141 119 222 1.78e-27 113
Msa0442740 MtrunA17_Chr4g0042611 55.696 79 35 0 35 113 10 88 2.66e-27 105
Msa0442740 MtrunA17_Chr3g0133601 47.170 106 55 1 39 144 37 141 5.33e-27 108
Msa0442740 MtrunA17_Chr2g0294811 54.430 79 36 0 35 113 10 88 6.02e-27 105
Msa0442740 MtrunA17_Chr4g0008551 48.148 108 53 2 39 145 38 143 8.39e-27 111
Msa0442740 MtrunA17_Chr5g0401731 49.020 102 51 1 39 140 15 115 6.21e-26 108
Msa0442740 MtrunA17_Chr3g0117511 40.157 127 73 2 31 155 175 300 1.05e-25 109
Msa0442740 MtrunA17_Chr4g0058991 46.789 109 50 3 36 141 206 309 3.38e-25 108
Msa0442740 MtrunA17_Chr2g0323321 52.564 78 37 0 37 114 11 88 3.82e-25 100
Msa0442740 MtrunA17_Chr6g0453751 51.485 101 38 3 27 118 12 110 4.46e-25 100
Msa0442740 MtrunA17_Chr6g0454921 47.059 102 53 1 39 140 15 115 8.55e-25 102
Msa0442740 MtrunA17_Chr3g0139671 46.154 104 55 1 37 140 83 185 9.39e-25 108
Msa0442740 MtrunA17_Chr8g0342531 52.564 78 37 0 37 114 12 89 1.38e-24 100
Msa0442740 MtrunA17_Chr7g0228531 42.520 127 66 4 17 143 202 321 1.53e-24 106
Msa0442740 MtrunA17_Chr4g0053431 44.118 102 56 1 39 140 5 105 2.41e-24 102
Msa0442740 MtrunA17_Chr7g0238631 48.077 104 53 1 37 140 111 213 6.30e-24 105
Msa0442740 MtrunA17_Chr5g0425591 48.889 90 45 1 30 118 2 91 8.49e-24 95.5
Msa0442740 MtrunA17_Chr5g0437321 43.750 128 69 2 23 150 5 129 8.59e-24 101
Msa0442740 MtrunA17_Chr6g0460661 42.056 107 61 1 39 145 16 121 9.73e-24 97.8
Msa0442740 MtrunA17_Chr1g0157731 43.269 104 58 1 37 140 89 191 9.92e-24 105
Msa0442740 MtrunA17_Chr8g0342511 53.947 76 35 0 37 112 12 87 2.52e-23 94.4
Msa0442740 MtrunA17_Chr6g0480581 42.727 110 62 1 39 148 4 112 7.52e-23 97.4
Msa0442740 MtrunA17_Chr5g0434901 58.824 68 28 0 71 138 7 74 1.23e-22 93.2
Msa0442740 MtrunA17_Chr7g0254261 43.636 110 61 1 39 148 89 197 1.98e-22 99.0
Msa0442740 MtrunA17_Chr5g0417621 44.762 105 55 2 39 142 134 236 5.44e-22 98.6
Msa0442740 MtrunA17_Chr4g0042501 40.650 123 68 3 23 142 87 207 6.33e-22 98.2
Msa0442740 MtrunA17_Chr7g0229101 54.286 70 32 0 69 138 4 73 1.33e-21 93.2
Msa0442740 MtrunA17_Chr8g0342461 49.367 79 39 1 37 114 12 90 2.71e-21 90.1
Msa0442740 MtrunA17_Chr8g0342471 49.367 79 39 1 37 114 12 90 3.60e-21 89.7
Msa0442740 MtrunA17_Chr5g0397841 45.918 98 52 1 37 134 108 204 4.51e-21 96.3
Msa0442740 MtrunA17_Chr7g0229131 52.113 71 34 0 69 139 4 74 6.16e-21 90.1
Msa0442740 MtrunA17_Chr7g0228401 48.936 94 46 2 50 143 290 381 1.87e-20 94.4
Msa0442740 MtrunA17_Chr7g0238651 38.835 103 61 1 42 142 10 112 4.50e-20 92.0
Msa0442740 MtrunA17_Chr7g0228481 38.583 127 71 4 17 143 202 321 6.70e-20 92.4
Msa0442740 MtrunA17_Chr3g0125801 43.810 105 56 2 39 142 16 118 1.75e-19 89.0
Msa0442740 MtrunA17_Chr3g0093811 50.000 72 36 0 69 140 14 85 4.50e-19 87.4
Msa0442740 MtrunA17_Chr6g0460671 40.367 109 60 2 39 145 99 204 7.67e-19 88.2
Msa0442740 MtrunA17_Chr1g0177901 44.828 87 47 1 49 135 4 89 8.03e-18 82.4
Msa0442740 MtrunA17_Chr1g0193901 50.575 87 41 2 37 121 11 97 2.84e-17 77.8
Msa0442740 MtrunA17_Chr1g0193891 50.575 87 41 2 37 121 11 97 2.84e-17 77.8
Msa0442740 MtrunA17_Chr1g0193871 50.575 87 41 2 37 121 11 97 2.84e-17 77.8
Msa0442740 MtrunA17_Chr1g0193881 50.575 87 41 2 37 121 11 97 2.84e-17 77.8
Msa0442740 MtrunA17_Chr7g0233061 31.618 136 83 4 7 139 148 276 6.33e-17 82.4
Msa0442740 MtrunA17_Chr8g0362231 38.384 99 60 1 42 140 25 122 8.09e-16 79.7
Msa0442740 MtrunA17_Chr5g0416341 36.634 101 63 1 42 142 29 128 1.75e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0442740 AT3G11440.3 40.816 490 245 13 36 498 40 511 2.09e-98 308
Msa0442740 AT3G11440.4 40.816 490 245 13 36 498 40 511 2.09e-98 308
Msa0442740 AT3G11440.1 40.816 490 245 13 36 498 40 511 2.09e-98 308
Msa0442740 AT5G06100.5 40.000 485 235 11 34 498 29 477 2.36e-92 291
Msa0442740 AT5G06100.2 40.000 485 235 11 34 498 29 477 2.36e-92 291
Msa0442740 AT5G06100.3 40.000 485 235 11 34 498 29 477 2.36e-92 291
Msa0442740 AT5G06100.4 40.000 485 235 11 34 498 29 477 2.36e-92 291
Msa0442740 AT3G11440.2 45.093 377 179 9 36 387 40 413 6.63e-91 286
Msa0442740 AT5G06100.1 43.909 394 195 9 34 407 29 416 8.49e-90 283
Msa0442740 AT5G55020.1 79.339 121 25 0 32 152 21 141 7.22e-66 222
Msa0442740 AT2G32460.1 75.385 130 32 0 24 153 5 134 5.08e-65 219
Msa0442740 AT2G32460.2 81.197 117 22 0 37 153 6 122 2.77e-64 217
Msa0442740 AT4G26930.1 75.194 129 26 1 23 151 11 133 3.58e-64 214
Msa0442740 AT2G26960.1 39.496 357 159 12 37 365 20 347 9.62e-64 214
Msa0442740 AT4G21440.1 46.023 176 82 2 37 199 12 187 2.58e-44 160
Msa0442740 AT4G28110.1 60.909 110 42 1 37 145 12 121 3.06e-44 158
Msa0442740 AT3G02940.2 62.500 104 39 0 37 140 12 115 7.07e-44 158
Msa0442740 AT3G61250.1 63.208 106 39 0 35 140 10 115 8.50e-44 157
Msa0442740 AT3G02940.1 62.500 104 39 0 37 140 12 115 1.10e-43 157
Msa0442740 AT3G02940.3 62.500 104 39 0 37 140 12 115 1.10e-43 157
Msa0442740 AT4G05100.1 63.462 104 38 0 37 140 13 116 1.28e-43 157
Msa0442740 AT1G22640.1 62.500 104 39 0 37 140 12 115 2.38e-43 155
Msa0442740 AT4G09460.1 63.725 102 37 0 39 140 14 115 1.60e-42 152
Msa0442740 AT3G01530.1 60.194 103 41 0 37 139 25 127 1.76e-42 150
Msa0442740 AT5G40330.1 48.980 147 65 2 38 174 13 159 2.22e-42 151
Msa0442740 AT5G16770.4 60.577 104 41 0 37 140 12 115 2.79e-42 154
Msa0442740 AT5G16770.3 60.577 104 41 0 37 140 12 115 2.79e-42 154
Msa0442740 AT5G16770.1 60.577 104 41 0 37 140 12 115 4.22e-42 154
Msa0442740 AT5G16770.2 60.577 104 41 0 37 140 12 115 4.22e-42 154
Msa0442740 AT1G35515.1 61.538 104 40 0 37 140 12 115 9.07e-42 149
Msa0442740 AT3G13540.1 58.654 104 43 0 37 140 23 126 1.44e-41 150
Msa0442740 AT5G10280.1 61.538 104 40 0 37 140 12 115 1.88e-41 152
Msa0442740 AT5G14750.1 59.223 103 42 0 38 140 17 119 2.49e-41 147
Msa0442740 AT2G16720.1 61.538 104 40 0 37 140 12 115 2.84e-41 149
Msa0442740 AT1G34670.1 60.577 104 41 0 37 140 12 115 3.16e-41 152
Msa0442740 AT5G65230.1 58.654 104 43 0 37 140 12 115 3.69e-41 150
Msa0442740 AT5G54230.1 59.615 104 42 0 37 140 12 115 7.87e-41 150
Msa0442740 AT2G31180.1 57.798 109 46 0 37 145 12 120 9.06e-41 147
Msa0442740 AT3G01140.2 60.577 104 41 0 37 140 12 115 9.59e-41 150
Msa0442740 AT3G47600.1 57.407 108 46 0 35 142 10 117 1.52e-40 149
Msa0442740 AT3G23250.1 56.637 113 49 0 37 149 12 124 1.68e-40 148
Msa0442740 AT4G13480.1 59.813 107 43 0 36 142 5 111 2.11e-40 147
Msa0442740 AT1G66230.1 58.333 108 45 0 35 142 10 117 2.13e-40 147
Msa0442740 AT3G01140.1 60.577 104 41 0 37 140 55 158 2.21e-40 150
Msa0442740 AT3G27810.1 55.340 103 46 0 37 139 20 122 3.12e-40 145
Msa0442740 AT4G38620.1 60.784 102 40 0 39 140 14 115 3.71e-40 147
Msa0442740 AT5G49330.1 57.798 109 46 0 35 143 10 118 4.33e-40 148
Msa0442740 AT5G15310.1 59.615 104 42 0 37 140 12 115 4.99e-40 148
Msa0442740 AT1G57560.2 57.692 104 44 0 37 140 12 115 5.07e-40 146
Msa0442740 AT5G62470.2 57.407 108 46 0 35 142 10 117 5.30e-40 148
Msa0442740 AT4G01680.3 58.491 106 44 0 37 142 12 117 5.62e-40 145
Msa0442740 AT5G15310.4 59.615 104 42 0 37 140 12 115 5.81e-40 145
Msa0442740 AT1G57560.1 57.692 104 44 0 37 140 12 115 5.82e-40 147
Msa0442740 AT5G15310.2 59.615 104 42 0 37 140 12 115 5.84e-40 147
Msa0442740 AT5G40350.1 55.340 103 46 0 37 139 17 119 6.75e-40 144
Msa0442740 AT3G13890.2 57.692 104 44 0 37 140 12 115 7.11e-40 148
Msa0442740 AT5G07690.1 56.604 106 46 0 34 139 9 114 8.52e-40 147
Msa0442740 AT5G26660.1 57.547 106 45 0 37 142 12 117 8.54e-40 148
Msa0442740 AT4G34990.1 59.804 102 41 0 39 140 14 115 9.21e-40 145
Msa0442740 AT2G47190.1 55.660 106 47 0 37 142 20 125 1.03e-39 145
Msa0442740 AT1G74650.1 57.547 106 45 0 35 140 10 115 1.14e-39 147
Msa0442740 AT5G61420.2 56.075 107 47 0 34 140 9 115 1.21e-39 148
Msa0442740 AT3G28910.1 60.185 108 41 1 33 140 10 115 1.33e-39 147
Msa0442740 AT3G24310.1 58.491 106 44 0 38 143 19 124 1.54e-39 145
Msa0442740 AT4G01680.1 58.491 106 44 0 37 142 12 117 1.88e-39 146
Msa0442740 AT1G06180.1 59.434 106 43 0 35 140 10 115 2.05e-39 144
Msa0442740 AT5G07700.1 55.140 107 48 0 34 140 9 115 2.43e-39 146
Msa0442740 AT5G07700.2 55.140 107 48 0 34 140 9 115 2.43e-39 146
Msa0442740 AT1G48000.1 54.286 105 48 0 35 139 30 134 4.80e-39 142
Msa0442740 AT1G18570.1 60.577 104 41 0 37 140 13 116 5.12e-39 145
Msa0442740 AT4G37780.1 56.075 107 46 1 35 140 10 116 5.24e-39 144
Msa0442740 AT3G27920.1 58.252 103 43 0 38 140 15 117 5.48e-39 142
Msa0442740 AT1G68320.1 55.660 106 47 0 37 142 19 124 7.22e-39 144
Msa0442740 AT2G47460.1 57.547 106 45 0 35 140 10 115 9.09e-39 145
Msa0442740 AT5G12870.1 56.604 106 46 0 37 142 18 123 9.24e-39 143
Msa0442740 AT1G25340.1 49.600 125 57 1 18 142 5 123 1.13e-38 143
Msa0442740 AT1G08810.1 56.604 106 46 0 35 140 10 115 1.18e-38 143
Msa0442740 AT5G62470.1 57.407 108 45 1 35 142 10 116 1.72e-38 144
Msa0442740 AT5G35550.1 56.731 104 45 0 37 140 14 117 3.66e-38 140
Msa0442740 AT5G16600.1 56.481 108 47 0 35 142 10 117 7.50e-38 142
Msa0442740 AT1G79180.1 55.769 104 46 0 37 140 14 117 7.50e-38 141
Msa0442740 AT2G26950.1 45.181 166 83 4 37 199 16 176 7.67e-38 143
Msa0442740 AT5G60890.1 55.660 106 47 0 37 142 12 117 9.81e-38 140
Msa0442740 AT4G12350.1 54.717 106 48 0 35 140 10 115 1.01e-37 140
Msa0442740 AT5G62320.1 55.752 113 43 1 35 140 11 123 1.08e-37 139
Msa0442740 AT5G56110.1 56.731 104 45 0 37 140 12 115 1.14e-37 141
Msa0442740 AT3G30210.1 57.547 106 45 0 38 143 28 133 1.31e-37 140
Msa0442740 AT4G17785.2 54.808 104 47 0 37 140 13 116 1.52e-37 142
Msa0442740 AT4G17785.1 54.808 104 47 0 37 140 13 116 1.61e-37 142
Msa0442740 AT1G09540.1 54.717 106 48 0 37 142 12 117 1.84e-37 142
Msa0442740 AT4G22680.1 54.808 104 47 0 37 140 12 115 2.92e-37 139
Msa0442740 AT1G63910.1 55.660 106 47 0 37 142 12 117 3.16e-37 141
Msa0442740 AT3G08500.1 51.163 129 61 1 16 142 7 135 3.27e-37 140
Msa0442740 AT3G62610.1 55.660 106 47 0 35 140 10 115 3.72e-37 140
Msa0442740 AT1G16490.1 53.846 104 48 0 37 140 14 117 4.79e-37 138
Msa0442740 AT3G13890.1 53.097 113 44 1 37 140 12 124 5.33e-37 140
Msa0442740 AT3G60460.1 53.271 107 49 1 37 142 11 117 6.50e-37 139
Msa0442740 AT5G52600.1 54.630 108 49 0 33 140 8 115 7.09e-37 135
Msa0442740 AT5G14340.1 55.660 106 47 0 37 142 24 129 7.15e-37 138
Msa0442740 AT1G56160.1 53.846 104 48 0 37 140 14 117 7.85e-37 138
Msa0442740 AT3G12720.1 50.442 113 56 0 28 140 13 125 1.45e-36 138
Msa0442740 AT1G74080.1 57.282 103 44 0 37 139 12 114 1.73e-36 138
Msa0442740 AT2G36890.1 53.913 115 50 2 37 150 12 124 2.22e-36 137
Msa0442740 AT4G01680.2 52.542 118 44 1 37 142 12 129 2.91e-36 138
Msa0442740 AT5G65790.1 57.143 105 44 1 37 140 12 116 3.35e-36 139
Msa0442740 AT5G57620.1 56.190 105 45 1 37 140 12 116 3.75e-36 137
Msa0442740 AT2G36890.2 53.913 115 50 2 37 150 53 165 4.06e-36 137
Msa0442740 AT5G23000.1 54.286 105 47 1 37 140 12 116 4.29e-36 137
Msa0442740 AT3G49690.1 57.143 105 44 1 37 140 12 116 6.23e-36 136
Msa0442740 AT5G59780.3 55.340 103 46 0 38 140 9 111 9.81e-36 133
Msa0442740 AT1G74430.1 54.808 104 47 0 37 140 12 115 1.56e-35 134
Msa0442740 AT3G28470.1 57.576 99 42 0 37 135 12 110 2.01e-35 135
Msa0442740 AT3G46130.1 54.369 103 47 0 38 140 10 112 3.87e-35 132
Msa0442740 AT3G12820.1 53.846 104 48 0 37 140 14 117 1.50e-34 130
Msa0442740 AT1G25340.2 47.200 125 55 2 18 142 5 118 2.48e-34 131
Msa0442740 AT1G25340.3 47.200 125 55 2 18 142 5 118 4.09e-34 131
Msa0442740 AT3G06490.1 56.311 103 45 0 37 139 19 121 4.23e-34 131
Msa0442740 AT1G66370.1 50.476 105 52 0 37 141 8 112 9.12e-34 128
Msa0442740 AT1G18710.1 52.885 104 49 0 37 140 12 115 2.24e-33 128
Msa0442740 AT5G49620.1 53.398 103 48 0 37 139 26 128 6.37e-33 128
Msa0442740 AT3G53200.1 50.000 108 54 0 36 143 8 115 4.50e-32 124
Msa0442740 AT1G79180.2 42.336 137 46 1 37 140 14 150 4.61e-32 126
Msa0442740 AT3G48920.1 51.961 102 49 0 38 139 19 120 1.87e-31 122
Msa0442740 AT1G66380.1 51.429 105 51 0 37 141 8 112 2.63e-31 118
Msa0442740 AT5G52260.1 48.696 115 59 0 38 152 13 127 6.98e-31 121
Msa0442740 AT1G56650.1 50.476 105 52 0 37 141 8 112 2.64e-30 119
Msa0442740 AT5G49620.2 47.009 117 48 1 37 139 26 142 2.04e-29 118
Msa0442740 AT1G66390.1 50.476 105 52 0 37 141 8 112 2.97e-29 116
Msa0442740 AT5G26660.2 64.384 73 26 0 70 142 14 86 3.09e-29 118
Msa0442740 AT4G25560.1 48.544 103 53 0 38 140 11 113 6.17e-29 116
Msa0442740 AT3G27785.1 47.619 105 54 1 37 141 187 290 1.81e-26 112
Msa0442740 AT3G27810.2 56.944 72 31 0 68 139 2 73 2.50e-26 105
Msa0442740 AT5G35550.2 61.972 71 27 0 70 140 50 120 2.56e-26 108
Msa0442740 AT5G58850.1 49.057 106 50 3 37 141 103 205 4.44e-26 111
Msa0442740 AT5G11050.1 42.537 134 63 4 39 171 105 225 7.09e-26 110
Msa0442740 AT4G18770.1 48.113 106 51 3 37 141 215 317 9.12e-26 110
Msa0442740 AT3G55730.1 48.077 104 51 2 39 141 56 157 1.10e-25 109
Msa0442740 AT5G40360.1 42.453 106 60 1 36 141 155 259 1.21e-25 108
Msa0442740 AT3G09230.1 50.000 102 50 1 39 140 55 155 1.38e-25 108
Msa0442740 AT5G14750.3 60.294 68 27 0 73 140 18 85 2.34e-25 102
Msa0442740 AT5G40350.2 57.143 70 30 0 70 139 5 74 2.68e-25 102
Msa0442740 AT3G12820.2 63.235 68 25 0 73 140 2 69 3.75e-25 103
Msa0442740 AT2G23290.1 50.000 102 50 1 39 140 13 113 3.98e-25 106
Msa0442740 AT5G02320.1 41.844 141 69 3 37 174 125 255 4.72e-25 109
Msa0442740 AT5G02320.2 41.844 141 69 3 37 174 125 255 4.72e-25 109
Msa0442740 AT5G02320.3 41.844 141 69 3 37 174 65 195 5.81e-25 108
Msa0442740 AT3G47600.2 58.904 73 30 0 70 142 39 111 1.02e-24 105
Msa0442740 AT5G67300.1 48.039 102 52 1 39 140 6 106 1.40e-24 104
Msa0442740 AT3G46130.3 59.722 72 29 0 69 140 9 80 1.97e-24 102
Msa0442740 AT2G39880.1 45.872 109 56 2 33 140 44 150 2.46e-24 105
Msa0442740 AT5G59780.2 59.155 71 29 0 70 140 20 90 3.84e-24 100
Msa0442740 AT4G37260.1 47.059 102 53 1 39 140 13 113 3.91e-24 103
Msa0442740 AT3G53200.2 56.757 74 32 0 70 143 9 82 5.80e-24 100
Msa0442740 AT3G46130.4 59.155 71 29 0 70 140 20 90 6.41e-24 100
Msa0442740 AT3G50060.1 44.037 109 60 1 39 147 6 113 9.36e-24 102
Msa0442740 AT3G09370.2 46.154 104 55 1 37 140 133 235 1.29e-23 104
Msa0442740 AT3G09370.1 46.154 104 55 1 37 140 128 230 1.30e-23 104
Msa0442740 AT1G69560.2 42.424 132 65 4 14 142 102 225 1.31e-23 102
Msa0442740 AT1G69560.1 42.424 132 65 4 14 142 86 209 1.52e-23 102
Msa0442740 AT3G09370.3 46.154 104 55 1 37 140 141 243 1.53e-23 104
Msa0442740 AT4G32730.5 43.269 104 58 1 37 140 85 187 2.26e-23 105
Msa0442740 AT4G32730.4 43.269 104 58 1 37 140 85 187 2.26e-23 105
Msa0442740 AT4G32730.3 43.269 104 58 1 37 140 85 187 2.26e-23 105
Msa0442740 AT4G32730.2 43.269 104 58 1 37 140 85 187 2.26e-23 105
Msa0442740 AT4G32730.1 43.269 104 58 1 37 140 85 187 2.45e-23 104
Msa0442740 AT1G17950.1 44.828 116 61 2 35 149 1 114 4.11e-23 99.0
Msa0442740 AT5G11510.3 36.735 147 79 3 37 170 79 224 4.45e-23 103
Msa0442740 AT5G11510.1 36.735 147 79 3 37 170 79 224 4.45e-23 103
Msa0442740 AT5G11510.4 36.735 147 79 3 37 170 79 224 4.45e-23 103
Msa0442740 AT5G11510.5 36.735 147 79 3 37 170 79 224 4.55e-23 103
Msa0442740 AT5G11510.2 36.735 147 79 3 37 170 79 224 4.64e-23 103
Msa0442740 AT1G26780.2 45.370 108 56 2 36 142 95 200 8.60e-23 100
Msa0442740 AT1G26780.1 45.370 108 56 2 36 142 95 200 8.65e-23 98.6
Msa0442740 AT5G17800.1 44.860 107 58 1 36 142 90 195 8.78e-23 99.8
Msa0442740 AT4G33450.1 43.519 108 60 1 38 145 18 124 1.69e-22 97.1
Msa0442740 AT1G18960.1 44.118 102 54 2 39 140 10 108 1.73e-21 95.5
Msa0442740 AT1G66380.3 55.556 72 32 0 70 141 8 79 3.91e-21 89.0
Msa0442740 AT2G25230.1 42.308 104 58 2 37 140 24 125 5.46e-21 92.4
Msa0442740 AT1G73410.1 44.954 109 57 2 35 142 2 108 1.54e-20 91.3
Msa0442740 AT4G00540.2 34.146 164 91 4 37 197 101 250 1.90e-20 94.0
Msa0442740 AT1G73410.2 44.954 109 57 2 35 142 2 108 2.44e-20 89.7
Msa0442740 AT3G29020.1 41.121 107 62 1 36 142 62 167 2.93e-20 90.5
Msa0442740 AT3G29020.2 41.121 107 62 1 36 142 64 169 3.24e-20 91.7
Msa0442740 AT4G00540.1 34.146 164 91 4 37 197 99 248 3.45e-20 93.6
Msa0442740 AT1G66380.2 50.000 78 39 0 37 114 8 85 1.71e-19 84.3
Msa0442740 AT1G22640.3 63.158 57 21 0 84 140 2 58 2.45e-19 86.7
Msa0442740 AT2G37630.1 38.835 103 61 1 42 142 7 109 4.75e-19 89.4
Msa0442740 AT5G40430.1 34.307 137 84 4 4 140 22 152 6.62e-19 87.0
Msa0442740 AT3G23250.2 53.030 66 31 0 84 149 2 67 2.19e-17 82.0
Msa0442740 AT1G71030.2 50.769 65 32 0 76 140 5 69 4.70e-17 79.7
Msa0442740 AT1G71030.1 50.769 65 32 0 76 140 19 83 6.16e-17 79.7
Msa0442740 AT5G14750.4 53.448 58 27 0 83 140 1 58 7.65e-17 77.8
Msa0442740 AT5G14750.2 53.448 58 27 0 83 140 1 58 7.65e-17 77.8
Msa0442740 AT1G14350.2 33.663 101 66 1 42 142 28 127 8.08e-15 77.0
Msa0442740 AT1G14350.1 33.663 101 66 1 42 142 28 127 8.08e-15 77.0
Msa0442740 AT5G39700.1 36.000 100 63 1 40 139 57 155 1.36e-13 70.1
Msa0442740 AT2G02820.2 32.673 101 67 1 42 142 33 132 9.74e-13 70.9
Msa0442740 AT2G02820.1 32.673 101 67 1 42 142 33 132 1.58e-12 70.1
Msa0442740 AT2G02820.3 32.673 101 67 1 42 142 33 132 2.99e-12 68.6
Msa0442740 AT5G59780.1 54.348 46 21 0 95 140 1 46 1.15e-11 63.9
Msa0442740 AT3G46130.2 54.348 46 21 0 95 140 1 46 1.77e-11 63.9
Msa0442740 AT4G25560.2 52.174 46 22 0 95 140 2 47 7.20e-11 62.4

Find 175 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGATCCTTTCTTTAAATT+TGG 0.143322 3_3:+12830279 None:intergenic
TTACTATCACTTTCTATTTC+AGG 0.162255 3_3:-12831522 Msa0442740:intron
ATGATCCTGAACATGGTAAA+AGG 0.208458 3_3:+12828057 None:intergenic
GAACAATTGTTATTTGAATT+TGG 0.225333 3_3:+12827698 None:intergenic
CAGCCACCAAAGCCGGTTTC+TGG 0.233349 3_3:+12827869 None:intergenic
AGTGAAAGAAAGAGAGAAAA+TGG 0.269506 3_3:+12832039 None:intergenic
ATCTGCAGAAGACGCTATTT+TGG 0.270851 3_3:-12830412 Msa0442740:CDS
TGCCCATCTGTTTCCCATTT+CGG 0.272213 3_3:+12830218 None:intergenic
AGGAGAGGAGGTGGTGGAAA+TGG 0.273865 3_3:+12832124 None:intergenic
GTTGCTCGCAAACGAACTTC+TGG 0.280289 3_3:+12828361 None:intergenic
CAAAGCCGGTTTCTGGATAT+TGG 0.282709 3_3:+12827876 None:intergenic
TAACAATTTGAAGGAAAATC+AGG 0.295404 3_3:-12828233 Msa0442740:CDS
TAACAGCATGGCACTCATTC+AGG 0.301452 3_3:+12827549 None:intergenic
TCGAGCGTGCCACTATTATT+TGG 0.311579 3_3:+12827749 None:intergenic
CAGAAACCGGCTTTGGTGGC+TGG 0.325999 3_3:-12827868 Msa0442740:CDS
GGAATTTCAGTTAACACCTT+TGG 0.328652 3_3:-12831557 Msa0442740:five_prime_UTR
GATAAGACTGTACAATCTTT+CGG 0.331678 3_3:-12828028 Msa0442740:CDS
ATGACATGGCACTTGAACTT+TGG 0.334723 3_3:-12826792 Msa0442740:three_prime_UTR
TGCTCAACTTCATTCCGAAA+TGG 0.334802 3_3:-12830232 Msa0442740:CDS
CAAGTGGAACAAACAAGAAT+TGG 0.336573 3_3:-12828087 Msa0442740:CDS
GGTAACGGAGGAAGTGTTAA+TGG 0.360550 3_3:-12830465 Msa0442740:CDS
CCCGATGACGCCTCTTGGTC+CGG 0.365400 3_3:+12828404 None:intergenic
TGCAATATTTAACAATTTGA+AGG 0.368225 3_3:-12828242 Msa0442740:CDS
TGTCTTCTTCTGATAAATAA+TGG 0.371278 3_3:+12827724 None:intergenic
TGGAATGCAAGCTGCTAATT+CGG 0.373693 3_3:-12826772 Msa0442740:three_prime_UTR
CACTGTTTGGGGTAGAAACT+TGG 0.377211 3_3:+12827177 None:intergenic
ACACCTGCTCAGAACTTTAG+TGG 0.382430 3_3:-12827497 Msa0442740:intron
GCTCAACTTCATTCCGAAAT+GGG 0.383434 3_3:-12830231 Msa0442740:CDS
AACGCTGTTCAGAAGCATTC+GGG 0.385357 3_3:-12830354 Msa0442740:CDS
TTCTCAGGCAAAATTGTAAT+AGG 0.388890 3_3:+12828202 None:intergenic
GAAGAGAGGAGAGGAGGTGG+TGG 0.392575 3_3:+12832118 None:intergenic
ATAATGAAATAAAGAACTAT+TGG 0.392597 3_3:-12828432 Msa0442740:CDS
AGAAACCGGCTTTGGTGGCT+GGG 0.403583 3_3:-12827867 Msa0442740:CDS
TTGGAAGAGAGGAGAGGAGG+TGG 0.407222 3_3:+12832115 None:intergenic
GGGGTAGAAACTTGGTCAAC+AGG 0.408150 3_3:+12827185 None:intergenic
ACTGACCCTGCATCTCCCTT+TGG 0.411283 3_3:-12827584 Msa0442740:CDS
TTTATCCCATGAGTTTGTAT+TGG 0.414468 3_3:+12827523 None:intergenic
GAAAGAGAAAGAGAAAATGA+AGG 0.422020 3_3:+12832080 None:intergenic
TTGCATTCTCCTCTTGATCC+TGG 0.422314 3_3:-12828004 Msa0442740:CDS
TGTTGTGCTCTTTCTTCGCT+CGG 0.424195 3_3:-12831960 Msa0442740:five_prime_UTR
ATGCTATTAGCAGAAATATC+AGG 0.424760 3_3:+12828178 None:intergenic
GAACGCTGTTCAGAAGCATT+CGG 0.427694 3_3:-12830355 Msa0442740:CDS
GAACTCTCACCTCCGTCAAC+AGG 0.428520 3_3:+12827644 None:intergenic
AAAGAGAGAAAATGGTACTT+AGG 0.431102 3_3:+12832047 None:intergenic
CCAAGAAAAGACATTGTTGA+TGG 0.435314 3_3:+12828112 None:intergenic
AAGAATAACATGAATGCATA+AGG 0.437700 3_3:+12826911 None:intergenic
TTAAGGCCAAATTTAAAGAA+AGG 0.440027 3_3:-12830285 Msa0442740:CDS
TATCTATATGATGAAATAGA+AGG 0.441280 3_3:+12831596 None:intergenic
TATCCAGAAACCGGCTTTGG+TGG 0.441737 3_3:-12827872 Msa0442740:CDS
GGAAGCATGGAGAAGGCAAC+TGG 0.444924 3_3:-12830377 Msa0442740:CDS
CCACATGGTGCGCAAGAGTC+CGG 0.446215 3_3:-12827782 Msa0442740:CDS
CAATATCCAGAAACCGGCTT+TGG 0.446614 3_3:-12827875 Msa0442740:CDS
AACTTCACAGCCTTGGATGT+TGG 0.448955 3_3:+12827914 None:intergenic
TTCAACTCCTTCACAAACTT+CGG 0.452432 3_3:-12831930 Msa0442740:intron
GAAACCGGCTTTGGTGGCTG+GGG 0.453433 3_3:-12827866 Msa0442740:CDS
CCACATGCTTATAATCTGTT+GGG 0.454130 3_3:+12827042 None:intergenic
GCCACATGCTTATAATCTGT+TGG 0.455345 3_3:+12827041 None:intergenic
CGAAGAAAGAGCACAACATT+GGG 0.455528 3_3:+12831965 None:intergenic
ATTATTTGGTGAAGAACAAC+CGG 0.458566 3_3:+12827763 None:intergenic
AACATCCAAGGCTGTGAAGT+TGG 0.463269 3_3:-12827912 Msa0442740:CDS
TGTTCTTCACCAAATAATAG+TGG 0.463312 3_3:-12827758 Msa0442740:CDS
GTTGCACCAAAGGGAGATGC+AGG 0.466644 3_3:+12827578 None:intergenic
GCCAGCCCGATGACGCCTCT+TGG 0.468187 3_3:+12828399 None:intergenic
CCCGGACCAAGAGGCGTCAT+CGG 0.469874 3_3:-12828405 Msa0442740:CDS
CCGGACCAAGAGGCGTCATC+GGG 0.470564 3_3:-12828404 Msa0442740:CDS
ACCACCCCAGCCACCAAAGC+CGG 0.479091 3_3:+12827862 None:intergenic
TTAGATGGGCAAATCACTTA+AGG 0.479321 3_3:-12830302 Msa0442740:CDS
CATTGATTCCACCAGTGCCT+TGG 0.480224 3_3:+12828320 None:intergenic
GCAGAAATATCAGGATTCTC+AGG 0.482477 3_3:+12828187 None:intergenic
ACCAAGAGGCGTCATCGGGC+TGG 0.485549 3_3:-12828400 Msa0442740:CDS
GATTGGCATGAGCAGTGCTA+TGG 0.486316 3_3:-12827098 Msa0442740:CDS
GGGACTTATTCTTCAAGTAC+AGG 0.486682 3_3:-12827014 Msa0442740:CDS
ACAGACTCATTCAGTGGAGA+TGG 0.487994 3_3:+12827830 None:intergenic
GGTGGAGTTGTTCTGAAGAA+AGG 0.488612 3_3:-12830444 Msa0442740:CDS
GAGTTATGTGAGGGGAGACC+AGG 0.492927 3_3:+12827986 None:intergenic
TGAACATGAATGAGACAGAA+TGG 0.495262 3_3:-12827616 Msa0442740:CDS
GTTTGTGAAGGAGTTGAAGA+AGG 0.496505 3_3:+12831935 None:intergenic
TCACTCCAATATCCAGAAAC+CGG 0.496933 3_3:-12827881 Msa0442740:CDS
TGATCCTGAACATGGTAAAA+GGG 0.497281 3_3:+12828058 None:intergenic
AACAATTTGAAGGAAAATCA+GGG 0.500787 3_3:-12828232 Msa0442740:CDS
ACCGGCTTTGGTGGCTGGGG+TGG 0.503981 3_3:-12827863 Msa0442740:CDS
CAGACTCATTCAGTGGAGAT+GGG 0.504118 3_3:+12827831 None:intergenic
TTCGTTTGCGAGCAACGAAA+GGG 0.504405 3_3:-12828354 Msa0442740:CDS
AGAGGAATTGCCATTTGATA+CGG 0.505395 3_3:+12827946 None:intergenic
TACCGCCATTCCGTATCAAA+TGG 0.505543 3_3:-12827956 Msa0442740:CDS
CAGGATTGAGGTTGCACCAA+AGG 0.505711 3_3:+12827568 None:intergenic
AAAGAGAAAGAGAAAATGAA+GGG 0.510193 3_3:+12832081 None:intergenic
TCTGAAGCTAACATGACATC+TGG 0.511041 3_3:+12827119 None:intergenic
GCGAAGAAAGAGCACAACAT+TGG 0.515978 3_3:+12831964 None:intergenic
AGTAAACATGGCCAAGGCAC+TGG 0.516230 3_3:-12828331 Msa0442740:CDS
GTTCGTTTGCGAGCAACGAA+AGG 0.521349 3_3:-12828355 Msa0442740:CDS
GAGCTCCAACTTCACAGCCT+TGG 0.521427 3_3:+12827907 None:intergenic
CCGATGACGCCTCTTGGTCC+GGG 0.523404 3_3:+12828405 None:intergenic
GTGGAGTTGTTCTGAAGAAA+GGG 0.523448 3_3:-12830443 Msa0442740:CDS
GATGGCACAGAATTGCAATA+TGG 0.524831 3_3:+12828130 None:intergenic
GGGAAACAGATGGGCACGTA+TGG 0.525456 3_3:-12830211 Msa0442740:CDS
AGGATTGAGGTTGCACCAAA+GGG 0.525462 3_3:+12827569 None:intergenic
ATGTCATGTTAGCTTCAGAT+TGG 0.528468 3_3:-12827115 Msa0442740:CDS
ATGGCACTCATTCAGGATTG+AGG 0.529262 3_3:+12827556 None:intergenic
GGAATCAATGATGGTGATAG+AGG 0.529519 3_3:-12828307 Msa0442740:CDS
TTAACACCAATACAAACTCA+TGG 0.531847 3_3:-12827529 Msa0442740:CDS
GTTGACTACGTCAGGAAGCA+TGG 0.533184 3_3:-12830390 Msa0442740:CDS
GAATTGGAAGAGAGGAGAGG+AGG 0.538300 3_3:+12832112 None:intergenic
AGGAGGTGGTGGAAATGGAA+TGG 0.538444 3_3:+12832129 None:intergenic
TGTCTATGTTGAACATCACT+TGG 0.540716 3_3:-12827142 Msa0442740:CDS
ATTCCGAAATGGGAAACAGA+TGG 0.543249 3_3:-12830221 Msa0442740:CDS
TGTTGGGTTGTCACTAGCCT+CGG 0.544008 3_3:+12827058 None:intergenic
CAAACACGGTCACGGTCGAA+TGG 0.545036 3_3:-12830492 Msa0442740:CDS
CGGTCGAATGGTGAGGGTAA+CGG 0.547843 3_3:-12830480 Msa0442740:CDS
ATTGGCATGAGCAGTGCTAT+GGG 0.550093 3_3:-12827097 Msa0442740:CDS
TCTTGCGCACCATGTGGCAG+AGG 0.550222 3_3:+12827788 None:intergenic
ACAGATTATAAGCATGTGGC+TGG 0.550488 3_3:-12827038 Msa0442740:CDS
TTCCGAAATGGGAAACAGAT+GGG 0.553867 3_3:-12830220 Msa0442740:CDS
GTTTCTGGATATTGGAGTGA+AGG 0.556016 3_3:+12827884 None:intergenic
TGTTCAACATAGACAAAGAT+CGG 0.557533 3_3:+12827150 None:intergenic
TCTACTACAACTCCTGTTGA+CGG 0.564833 3_3:-12827656 Msa0442740:CDS
GGATGTTGGCTTAGAAGTAG+AGG 0.565927 3_3:+12827928 None:intergenic
GAATAATTTGTATAATGACA+TGG 0.566040 3_3:-12826806 Msa0442740:three_prime_UTR
ATTATAAGCATGTGGCTGGT+GGG 0.566498 3_3:-12827034 Msa0442740:CDS
GAACATGAATGAGACAGAAT+GGG 0.567198 3_3:-12827615 Msa0442740:CDS
TTGTTCTGAAGAAAGGGCCG+TGG 0.569423 3_3:-12830437 Msa0442740:CDS
AGTGATTTGCCCATCTAAGA+CGG 0.570178 3_3:+12830307 None:intergenic
TAAACAATCTTGAAACTCGT+AGG 0.571349 3_3:-12826853 Msa0442740:three_prime_UTR
GCTAATAGCATTATGCGAAA+CGG 0.571740 3_3:-12828166 Msa0442740:CDS
GATTATAAGCATGTGGCTGG+TGG 0.575177 3_3:-12827035 Msa0442740:CDS
CATTCGGGCTTGTCTCGTTG+TGG 0.575251 3_3:-12830339 Msa0442740:CDS
AATTGCCATTTGATACGGAA+TGG 0.575303 3_3:+12827951 None:intergenic
CGAACTTCTGGAGGATAGAG+TGG 0.579102 3_3:+12828373 None:intergenic
TACGTCAGGAAGCATGGAGA+AGG 0.579724 3_3:-12830384 Msa0442740:CDS
AGACTCATTCAGTGGAGATG+GGG 0.580513 3_3:+12827832 None:intergenic
TACTTCTAAGCCAACATCCA+AGG 0.580718 3_3:-12827924 Msa0442740:CDS
CAGAACTATGATCCTGAACA+TGG 0.580858 3_3:+12828050 None:intergenic
AGGATCATTTACTGCTGATG+AGG 0.581122 3_3:-12830265 Msa0442740:CDS
GAGGGGAGACCAGGATCAAG+AGG 0.581130 3_3:+12827995 None:intergenic
TTTCTGGATATTGGAGTGAA+GGG 0.581747 3_3:+12827885 None:intergenic
AACGGAGGAAGTGTTAATGG+TGG 0.584165 3_3:-12830462 Msa0442740:CDS
GCAATGATCAAACACGGTCA+CGG 0.585404 3_3:-12830500 Msa0442740:CDS
AAACAATCTTGAAACTCGTA+GGG 0.589016 3_3:-12826852 Msa0442740:three_prime_UTR
TAAAGAACTATTGGAATACC+CGG 0.592308 3_3:-12828423 Msa0442740:CDS
TAACCACTAAAGTTCTGAGC+AGG 0.593277 3_3:+12827494 None:intergenic
TTGTATTGGTGTTAACAGCA+TGG 0.595840 3_3:+12827537 None:intergenic
GGACTTATTCTTCAAGTACA+GGG 0.596006 3_3:-12827013 Msa0442740:CDS
AAATAATAGTGGCACGCTCG+AGG 0.597636 3_3:-12827747 Msa0442740:CDS
GTAATGAATTTAAGATCCAA+AGG 0.604364 3_3:+12831541 None:intergenic
AATCAGTCTCCTCTGCCACA+TGG 0.606298 3_3:-12827797 Msa0442740:CDS
TAACACCAATACAAACTCAT+GGG 0.608765 3_3:-12827528 Msa0442740:CDS
ACAATTTGAAGGAAAATCAG+GGG 0.609243 3_3:-12828231 Msa0442740:CDS
ACGGTCACGGTCGAATGGTG+AGG 0.609707 3_3:-12830487 Msa0442740:CDS
GCAACGAAAGGGAGTAAACA+TGG 0.610324 3_3:-12828343 Msa0442740:CDS
TAATACATTGAGTTATGTGA+GGG 0.613054 3_3:+12827977 None:intergenic
GCGTCTTCTGCAGATGTCCA+CGG 0.613237 3_3:+12830420 None:intergenic
ATTTCATTATCTGTACGACC+AGG 0.614489 3_3:+12828445 None:intergenic
AAACATGGCCAAGGCACTGG+TGG 0.614540 3_3:-12828328 Msa0442740:CDS
GGCACTGGTGGAATCAATGA+TGG 0.615452 3_3:-12828316 Msa0442740:CDS
GACTCATTCAGTGGAGATGG+GGG 0.616024 3_3:+12827833 None:intergenic
ACATCAACAGACTCATTCAG+TGG 0.622129 3_3:+12827824 None:intergenic
GGCACAGAATTGCAATATGG+AGG 0.628604 3_3:+12828133 None:intergenic
CGGTCACGGTCGAATGGTGA+GGG 0.628700 3_3:-12830486 Msa0442740:CDS
GAATCAATGATGGTGATAGA+GGG 0.631416 3_3:-12828306 Msa0442740:CDS
AAAGGGAGTAAACATGGCCA+AGG 0.636108 3_3:-12828337 Msa0442740:CDS
GTAATACATTGAGTTATGTG+AGG 0.641674 3_3:+12827976 None:intergenic
GCTCGCAAACGAACTTCTGG+AGG 0.646915 3_3:+12828364 None:intergenic
CCCAACAGATTATAAGCATG+TGG 0.647208 3_3:-12827042 Msa0442740:CDS
ATCCAGACCGAAGTTTGTGA+AGG 0.648530 3_3:+12831923 None:intergenic
GACTTATTCTTCAAGTACAG+GGG 0.651682 3_3:-12827012 Msa0442740:CDS
TGCCATTTGATACGGAATGG+CGG 0.662997 3_3:+12827954 None:intergenic
TGCTCTGCAATGATCAAACA+CGG 0.665786 3_3:-12830506 Msa0442740:CDS
ATTGGAATACCCGGACCAAG+AGG 0.666025 3_3:-12828414 Msa0442740:CDS
ACTTATTCTTCAAGTACAGG+GGG 0.671833 3_3:-12827011 Msa0442740:CDS
CCGGACTCTTGCGCACCATG+TGG 0.683210 3_3:+12827782 None:intergenic
TTGCACCAAAGGGAGATGCA+GGG 0.696277 3_3:+12827579 None:intergenic
ACTACAACTCCTGTTGACGG+AGG 0.707521 3_3:-12827653 Msa0442740:CDS
TCGAATGGTGAGGGTAACGG+AGG 0.709659 3_3:-12830477 Msa0442740:CDS
AATACATTGAGTTATGTGAG+GGG 0.735887 3_3:+12827978 None:intergenic
GCACGAGAAGAACATGACCG+AGG 0.769618 3_3:-12827075 Msa0442740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATGTTAAACAATTTAA+TGG - chr3_3:12827174-12827193 Msa0442740:CDS 10.0%
!! TTAATGTTAAACAATTTAAT+GGG - chr3_3:12827175-12827194 Msa0442740:CDS 10.0%
!!! TTCATTTCATTTTAATTTTT+TGG - chr3_3:12828281-12828300 Msa0442740:CDS 10.0%
!!! TTTTTAAGTAATTTAATTTG+TGG - chr3_3:12828305-12828324 Msa0442740:CDS 10.0%
!!! TATTTTATTTCATATAGATA+GGG + chr3_3:12828909-12828928 None:intergenic 10.0%
!! ATCAATTATATCAATAAAAA+TGG - chr3_3:12830160-12830179 Msa0442740:intron 10.0%
!! AATATGAGAAAAAATTTATT+GGG + chr3_3:12830375-12830394 None:intergenic 10.0%
!! TAATATGAGAAAAAATTTAT+TGG + chr3_3:12830376-12830395 None:intergenic 10.0%
!! TTTAATGTTCAATACTTAAA+TGG - chr3_3:12827064-12827083 Msa0442740:CDS 15.0%
!! TTAATGTTCAATACTTAAAT+GGG - chr3_3:12827065-12827084 Msa0442740:CDS 15.0%
!!! TGTTAATTTATTTTTGATGT+AGG - chr3_3:12827232-12827251 Msa0442740:intron 15.0%
!! TATCACAAAATTATTAACAT+GGG + chr3_3:12827545-12827564 None:intergenic 15.0%
!! TTATCACAAAATTATTAACA+TGG + chr3_3:12827546-12827565 None:intergenic 15.0%
!!! ACATTAATTGCTTTTTATAA+AGG - chr3_3:12828256-12828275 Msa0442740:CDS 15.0%
!!! CATTAATTGCTTTTTATAAA+GGG - chr3_3:12828257-12828276 Msa0442740:CDS 15.0%
!!! CTATTTTATTTCATATAGAT+AGG + chr3_3:12828910-12828929 None:intergenic 15.0%
!! AAAAAAAAAAATTACATCGA+CGG + chr3_3:12829024-12829043 None:intergenic 15.0%
!! TTAAATAATCTAAATACGTA+CGG - chr3_3:12829168-12829187 Msa0442740:intron 15.0%
!!! CACAATTTTTTAATATCAAA+TGG + chr3_3:12829266-12829285 None:intergenic 15.0%
!! TCAATCATAAAAAATAATCA+TGG + chr3_3:12830419-12830438 None:intergenic 15.0%
!! ATAATGAAATAAAGAACTAT+TGG - chr3_3:12830471-12830490 Msa0442740:CDS 15.0%
!! AAATAAATACTTAAAATCAG+TGG - chr3_3:12831579-12831598 Msa0442740:five_prime_UTR 15.0%
!! TATCTATATGATGAAATAGA+AGG + chr3_3:12827310-12827329 None:intergenic 20.0%
!!! TAGATAGATTGTTCTTTTAT+TGG - chr3_3:12827324-12827343 Msa0442740:intron 20.0%
!!! AGATAGATTGTTCTTTTATT+GGG - chr3_3:12827325-12827344 Msa0442740:intron 20.0%
!! TAATACATAATTACTACCAA+AGG + chr3_3:12827654-12827673 None:intergenic 20.0%
!! ATTATTTATGCATGTTGAAT+TGG - chr3_3:12827670-12827689 Msa0442740:CDS 20.0%
!!! AGAGTTTTTATGACTTAATT+AGG - chr3_3:12827763-12827782 Msa0442740:CDS 20.0%
!!! ATTTATTTTACTTCCTGATT+TGG - chr3_3:12827916-12827935 Msa0442740:CDS 20.0%
!! CAAAACTAAGATCTAAATAA+TGG - chr3_3:12828218-12828237 Msa0442740:CDS 20.0%
!! AATGATCCTTTCTTTAAATT+TGG + chr3_3:12828627-12828646 None:intergenic 20.0%
!!! AACTTTAGAAGTAGTTATTA+AGG - chr3_3:12829081-12829100 Msa0442740:intron 20.0%
!!! AAGAAAGAAAAATGATCTTT+TGG + chr3_3:12829883-12829902 None:intergenic 20.0%
!! TGCAATATTTAACAATTTGA+AGG - chr3_3:12830661-12830680 Msa0442740:intron 20.0%
!!! GAACAATTGTTATTTGAATT+TGG + chr3_3:12831208-12831227 None:intergenic 20.0%
!! AACTAAAAACAGAAACTAAA+GGG + chr3_3:12831613-12831632 None:intergenic 20.0%
!! AAACTAAAAACAGAAACTAA+AGG + chr3_3:12831614-12831633 None:intergenic 20.0%
!!! GAATAATTTGTATAATGACA+TGG - chr3_3:12832097-12832116 Msa0442740:intron 20.0%
! AAAGAGAAAGAGAAAATGAA+GGG + chr3_3:12826825-12826844 None:intergenic 25.0%
!! ATTTTTGATGTAGGAATTTC+AGG - chr3_3:12827241-12827260 Msa0442740:intron 25.0%
!! TTTTTGATGTAGGAATTTCA+GGG - chr3_3:12827242-12827261 Msa0442740:intron 25.0%
!! GTAATGAATTTAAGATCCAA+AGG + chr3_3:12827365-12827384 None:intergenic 25.0%
! TTACTATCACTTTCTATTTC+AGG - chr3_3:12827381-12827400 Msa0442740:intron 25.0%
!! AATACTTGTTTAAAGCAACT+TGG + chr3_3:12827576-12827595 None:intergenic 25.0%
! TTTATTAAGTTCCTTTCCTT+TGG - chr3_3:12827635-12827654 Msa0442740:CDS 25.0%
!! GTTTTTATGACTTAATTAGG+TGG - chr3_3:12827766-12827785 Msa0442740:CDS 25.0%
! AAACTGCAATAAATCTTAGT+TGG - chr3_3:12827962-12827981 Msa0442740:CDS 25.0%
! ACATAACTCTTTCATCTTAA+AGG - chr3_3:12828082-12828101 Msa0442740:CDS 25.0%
! AATAATGGCAGAGTAAATTT+AGG - chr3_3:12828233-12828252 Msa0442740:CDS 25.0%
! TTAAGGCCAAATTTAAAGAA+AGG - chr3_3:12828618-12828637 Msa0442740:intron 25.0%
! GACAAATTAAACAGAAAACA+GGG + chr3_3:12828887-12828906 None:intergenic 25.0%
! TGTAGATAAATGAATGAAAC+TGG - chr3_3:12828968-12828987 Msa0442740:intron 25.0%
! AAATCTACAAAGATGTTACA+AGG + chr3_3:12829307-12829326 None:intergenic 25.0%
! TGTTGTATGTATTTGAACAT+TGG - chr3_3:12829714-12829733 Msa0442740:intron 25.0%
! TCTCAAGAAAGAAAGAAAAA+TGG + chr3_3:12829744-12829763 None:intergenic 25.0%
! TACTGCAATTACAAAACATT+GGG + chr3_3:12829821-12829840 None:intergenic 25.0%
! TTACTGCAATTACAAAACAT+TGG + chr3_3:12829822-12829841 None:intergenic 25.0%
!!! ACTTCTTACAAATTTTGGAA+TGG + chr3_3:12830054-12830073 None:intergenic 25.0%
! TTCCAAAATTTGTAAGAAGT+TGG - chr3_3:12830054-12830073 Msa0442740:intron 25.0%
!! TTCCAACTTCTTACAAATTT+TGG + chr3_3:12830059-12830078 None:intergenic 25.0%
! TTTGAAAAACTAAAATGTCC+AGG + chr3_3:12830311-12830330 None:intergenic 25.0%
! TAACAATTTGAAGGAAAATC+AGG - chr3_3:12830670-12830689 Msa0442740:intron 25.0%
! AACAATTTGAAGGAAAATCA+GGG - chr3_3:12830671-12830690 Msa0442740:intron 25.0%
! TAATACATTGAGTTATGTGA+GGG + chr3_3:12830929-12830948 None:intergenic 25.0%
! TGTCTTCTTCTGATAAATAA+TGG + chr3_3:12831182-12831201 None:intergenic 25.0%
! CAGGTTTAACTATTAGTATT+CGG + chr3_3:12831455-12831474 None:intergenic 25.0%
! ACTAAAAACAGAAACTAAAG+GGG + chr3_3:12831612-12831631 None:intergenic 25.0%
!! TTTTGCAAGGAATTACAATA+TGG + chr3_3:12831653-12831672 None:intergenic 25.0%
! AAGAATAACATGAATGCATA+AGG + chr3_3:12831995-12832014 None:intergenic 25.0%
GAAAGAGAAAGAGAAAATGA+AGG + chr3_3:12826826-12826845 None:intergenic 30.0%
AAAGAGAGAAAATGGTACTT+AGG + chr3_3:12826859-12826878 None:intergenic 30.0%
AGTGAAAGAAAGAGAGAAAA+TGG + chr3_3:12826867-12826886 None:intergenic 30.0%
CATTATCGATGAAACGAAAA+TGG + chr3_3:12827016-12827035 None:intergenic 30.0%
! ACTTGTTGAACTTTGAACAT+AGG - chr3_3:12827473-12827492 Msa0442740:intron 30.0%
CATAATTACTACCAAAGGAA+AGG + chr3_3:12827649-12827668 None:intergenic 30.0%
ATGTTGTGTAAACCAGTATT+AGG - chr3_3:12827855-12827874 Msa0442740:CDS 30.0%
!!! TTTTACTTCCTGATTTGGTA+AGG - chr3_3:12827921-12827940 Msa0442740:CDS 30.0%
TAATTATGCCTTACCAAATC+AGG + chr3_3:12827932-12827951 None:intergenic 30.0%
!! CTTAGTTGGTTTCATTTTAG+TGG - chr3_3:12827976-12827995 Msa0442740:CDS 30.0%
TTGATGAAATCCTGTAAATC+AGG + chr3_3:12828009-12828028 None:intergenic 30.0%
AACTCTTTCATCTTAAAGGA+TGG - chr3_3:12828086-12828105 Msa0442740:CDS 30.0%
!! ATTTTGCTTGGCTTTTATTG+TGG - chr3_3:12828109-12828128 Msa0442740:CDS 30.0%
!!! TTTAGATCTTAGTTTTGCGT+GGG + chr3_3:12828215-12828234 None:intergenic 30.0%
!!! ATTTAGATCTTAGTTTTGCG+TGG + chr3_3:12828216-12828235 None:intergenic 30.0%
GGACAAATTAAACAGAAAAC+AGG + chr3_3:12828888-12828907 None:intergenic 30.0%
!! CTTCTAAAGTTACACACATA+TGG + chr3_3:12829072-12829091 None:intergenic 30.0%
! TTGGAAACCTCCTTTTTATT+AGG + chr3_3:12829536-12829555 None:intergenic 30.0%
TCACATCATTCTTGAATTTG+TGG - chr3_3:12829566-12829585 Msa0442740:intron 30.0%
! ATCTTTTGGACTGAATGAAA+AGG + chr3_3:12829869-12829888 None:intergenic 30.0%
GTACTATACGATATGATCTA+AGG + chr3_3:12829923-12829942 None:intergenic 30.0%
ATGGAATTCAGACAGTAATA+GGG + chr3_3:12830023-12830042 None:intergenic 30.0%
AATGGAATTCAGACAGTAAT+AGG + chr3_3:12830024-12830043 None:intergenic 30.0%
ATTACTGTCTGAATTCCATT+AGG - chr3_3:12830024-12830043 Msa0442740:intron 30.0%
TTGGAAAAGCCTAAATGTTA+AGG - chr3_3:12830073-12830092 Msa0442740:intron 30.0%
TGGAAAAGCCTAAATGTTAA+GGG - chr3_3:12830074-12830093 Msa0442740:intron 30.0%
CTTAACAACCCTTAACATTT+AGG + chr3_3:12830085-12830104 None:intergenic 30.0%
! GTGAGTTGAGTGAAAATATT+AGG - chr3_3:12830131-12830150 Msa0442740:intron 30.0%
!! TAAAATGTCCAGGAGTATTT+GGG + chr3_3:12830301-12830320 None:intergenic 30.0%
ATAGCATTCTTTACCTTTGA+TGG + chr3_3:12830348-12830367 None:intergenic 30.0%
TAAAGAACTATTGGAATACC+CGG - chr3_3:12830480-12830499 Msa0442740:CDS 30.0%
!!! TGCATCTCATAGTTGTTTTT+CGG + chr3_3:12830638-12830657 None:intergenic 30.0%
ACAATTTGAAGGAAAATCAG+GGG - chr3_3:12830672-12830691 Msa0442740:intron 30.0%
TTCTCAGGCAAAATTGTAAT+AGG + chr3_3:12830704-12830723 None:intergenic 30.0%
ATGCTATTAGCAGAAATATC+AGG + chr3_3:12830728-12830747 None:intergenic 30.0%
GATAAGACTGTACAATCTTT+CGG - chr3_3:12830875-12830894 Msa0442740:intron 30.0%
AATACATTGAGTTATGTGAG+GGG + chr3_3:12830928-12830947 None:intergenic 30.0%
GTAATACATTGAGTTATGTG+AGG + chr3_3:12830930-12830949 None:intergenic 30.0%
! ATTATTTGGTGAAGAACAAC+CGG + chr3_3:12831143-12831162 None:intergenic 30.0%
TGTTCTTCACCAAATAATAG+TGG - chr3_3:12831145-12831164 Msa0442740:intron 30.0%
TTAACACCAATACAAACTCA+TGG - chr3_3:12831374-12831393 Msa0442740:intron 30.0%
TAACACCAATACAAACTCAT+GGG - chr3_3:12831375-12831394 Msa0442740:intron 30.0%
TTTATCCCATGAGTTTGTAT+TGG + chr3_3:12831383-12831402 None:intergenic 30.0%
ATTCGGTATACTGCATTAAA+AGG + chr3_3:12831438-12831457 None:intergenic 30.0%
! CGAATTTGAAAATGCTTTTC+AGG + chr3_3:12831474-12831493 None:intergenic 30.0%
AATATTTGTGAAGTCTTGCA+TGG + chr3_3:12831524-12831543 None:intergenic 30.0%
TGTTCAACATAGACAAAGAT+CGG + chr3_3:12831756-12831775 None:intergenic 30.0%
TAAACAATCTTGAAACTCGT+AGG - chr3_3:12832050-12832069 Msa0442740:five_prime_UTR 30.0%
AAACAATCTTGAAACTCGTA+GGG - chr3_3:12832051-12832070 Msa0442740:five_prime_UTR 30.0%
AAGAAAGAGAATTGGAAGAG+AGG + chr3_3:12826802-12826821 None:intergenic 35.0%
ATGAAGGGAAGAAAGAGAAT+TGG + chr3_3:12826810-12826829 None:intergenic 35.0%
TTCAACTCCTTCACAAACTT+CGG - chr3_3:12826973-12826992 Msa0442740:exon 35.0%
! GAAACGAAAATGGTGGAAAA+TGG + chr3_3:12827006-12827025 None:intergenic 35.0%
TATCGATGAAACGAAAATGG+TGG + chr3_3:12827013-12827032 None:intergenic 35.0%
GGAATTTCAGTTAACACCTT+TGG - chr3_3:12827346-12827365 Msa0442740:intron 35.0%
TGGAAAGAACATTATAGCGT+CGG - chr3_3:12827690-12827709 Msa0442740:CDS 35.0%
CAGTATTAGGATGTGTGTAT+GGG - chr3_3:12827868-12827887 Msa0442740:CDS 35.0%
!! CTTAAAGGATGGATTTTGCT+TGG - chr3_3:12828097-12828116 Msa0442740:CDS 35.0%
!!! TTAGATCTTAGTTTTGCGTG+GGG + chr3_3:12828214-12828233 None:intergenic 35.0%
AAAAAGTTGCCGTCTTAGAT+GGG - chr3_3:12828587-12828606 Msa0442740:intron 35.0%
TTAGATGGGCAAATCACTTA+AGG - chr3_3:12828601-12828620 Msa0442740:intron 35.0%
ACACGAAAACTAGAGATGTA+AGG + chr3_3:12828752-12828771 None:intergenic 35.0%
! TGCTATTTACCAATTGCCAT+AGG - chr3_3:12828815-12828834 Msa0442740:intron 35.0%
AAAATTACATCGACGGTCTA+TGG + chr3_3:12829017-12829036 None:intergenic 35.0%
TACGGTTTCATCTTAATAGC+TGG - chr3_3:12829186-12829205 Msa0442740:intron 35.0%
ACTGTCGAAGCCTAATAAAA+AGG - chr3_3:12829523-12829542 Msa0442740:intron 35.0%
GATATACACAGTTTGTCAGT+TGG + chr3_3:12829669-12829688 None:intergenic 35.0%
AAAACATTGGGTGATATGCA+AGG + chr3_3:12829809-12829828 None:intergenic 35.0%
AAAAGGTGAACGAATTTAGC+AGG + chr3_3:12829852-12829871 None:intergenic 35.0%
!! TTTTAAGGACATGCTACTGT+CGG - chr3_3:12829953-12829972 Msa0442740:intron 35.0%
ATGGTTGTCTTCTCGAAAAT+AGG - chr3_3:12830179-12830198 Msa0442740:intron 35.0%
AGATCTATCTCTCACTTTAG+AGG - chr3_3:12830202-12830221 Msa0442740:intron 35.0%
GAGCTAAATCTGTGTGAAAA+GGG - chr3_3:12830224-12830243 Msa0442740:CDS 35.0%
!! CTAAAATGTCCAGGAGTATT+TGG + chr3_3:12830302-12830321 None:intergenic 35.0%
AAAGAACTATCCTCCATCAA+AGG - chr3_3:12830332-12830351 Msa0442740:CDS 35.0%
!! TTCTTTTGCTTTTAGTTGCC+TGG - chr3_3:12830440-12830459 Msa0442740:CDS 35.0%
ATTTCATTATCTGTACGACC+AGG + chr3_3:12830461-12830480 None:intergenic 35.0%
! GAATCAATGATGGTGATAGA+GGG - chr3_3:12830597-12830616 Msa0442740:intron 35.0%
GCTAATAGCATTATGCGAAA+CGG - chr3_3:12830737-12830756 Msa0442740:intron 35.0%
CCAAGAAAAGACATTGTTGA+TGG + chr3_3:12830794-12830813 None:intergenic 35.0%
! CCATCAACAATGTCTTTTCT+TGG - chr3_3:12830791-12830810 Msa0442740:intron 35.0%
! ATGTCTTTTCTTGGTTCAAG+TGG - chr3_3:12830800-12830819 Msa0442740:intron 35.0%
CAAGTGGAACAAACAAGAAT+TGG - chr3_3:12830816-12830835 Msa0442740:intron 35.0%
! TTATCCCTTTTACCATGTTC+AGG - chr3_3:12830841-12830860 Msa0442740:intron 35.0%
TGATCCTGAACATGGTAAAA+GGG + chr3_3:12830848-12830867 None:intergenic 35.0%
ATGATCCTGAACATGGTAAA+AGG + chr3_3:12830849-12830868 None:intergenic 35.0%
! AATTGCCATTTGATACGGAA+TGG + chr3_3:12830955-12830974 None:intergenic 35.0%
! AGAGGAATTGCCATTTGATA+CGG + chr3_3:12830960-12830979 None:intergenic 35.0%
TTTCTGGATATTGGAGTGAA+GGG + chr3_3:12831021-12831040 None:intergenic 35.0%
TGAACATGAATGAGACAGAA+TGG - chr3_3:12831287-12831306 Msa0442740:intron 35.0%
GAACATGAATGAGACAGAAT+GGG - chr3_3:12831288-12831307 Msa0442740:intron 35.0%
!! TTGTATTGGTGTTAACAGCA+TGG + chr3_3:12831369-12831388 None:intergenic 35.0%
CACACTTCTATATACACCTT+TGG - chr3_3:12831496-12831515 Msa0442740:intron 35.0%
! CTAACATCACAACTTTTGCA+AGG + chr3_3:12831666-12831685 None:intergenic 35.0%
GTGATGTTAGAAATTTCTGC+AGG - chr3_3:12831676-12831695 Msa0442740:intron 35.0%
!! AAGATCGGTTTTCACTGTTT+GGG + chr3_3:12831741-12831760 None:intergenic 35.0%
!! AAAGATCGGTTTTCACTGTT+TGG + chr3_3:12831742-12831761 None:intergenic 35.0%
TGTCTATGTTGAACATCACT+TGG - chr3_3:12831761-12831780 Msa0442740:intron 35.0%
! ATGTCATGTTAGCTTCAGAT+TGG - chr3_3:12831788-12831807 Msa0442740:intron 35.0%
CCACATGCTTATAATCTGTT+GGG + chr3_3:12831864-12831883 None:intergenic 35.0%
GGACTTATTCTTCAAGTACA+GGG - chr3_3:12831890-12831909 Msa0442740:intron 35.0%
GACTTATTCTTCAAGTACAG+GGG - chr3_3:12831891-12831910 Msa0442740:intron 35.0%
ACTTATTCTTCAAGTACAGG+GGG - chr3_3:12831892-12831911 Msa0442740:intron 35.0%
!!! TAGGGATAATGTGCTTTTTC+AGG - chr3_3:12832069-12832088 Msa0442740:five_prime_UTR 35.0%
! CGAAGAAAGAGCACAACATT+GGG + chr3_3:12826941-12826960 None:intergenic 40.0%
GTTTGTGAAGGAGTTGAAGA+AGG + chr3_3:12826971-12826990 None:intergenic 40.0%
CTTATCCCAGTAAGTTAGGT+CGG + chr3_3:12827729-12827748 None:intergenic 40.0%
! AAGCCTTATCCCAGTAAGTT+AGG + chr3_3:12827733-12827752 None:intergenic 40.0%
CCATACACACATCCTAATAC+TGG + chr3_3:12827870-12827889 None:intergenic 40.0%
CCAGTATTAGGATGTGTGTA+TGG - chr3_3:12827867-12827886 Msa0442740:CDS 40.0%
TGGTCTCTTTCCTGATTTAC+AGG - chr3_3:12827996-12828015 Msa0442740:CDS 40.0%
!!! TAGATCTTAGTTTTGCGTGG+GGG + chr3_3:12828213-12828232 None:intergenic 40.0%
TGCTCTGCAATGATCAAACA+CGG - chr3_3:12828397-12828416 Msa0442740:CDS 40.0%
!! GTGGAGTTGTTCTGAAGAAA+GGG - chr3_3:12828460-12828479 Msa0442740:intron 40.0%
! ATCTGCAGAAGACGCTATTT+TGG - chr3_3:12828491-12828510 Msa0442740:intron 40.0%
!!! CTATTTTGGTTGACTACGTC+AGG - chr3_3:12828505-12828524 Msa0442740:intron 40.0%
GAAAAAGTTGCCGTCTTAGA+TGG - chr3_3:12828586-12828605 Msa0442740:intron 40.0%
! AGTGATTTGCCCATCTAAGA+CGG + chr3_3:12828599-12828618 None:intergenic 40.0%
AGGATCATTTACTGCTGATG+AGG - chr3_3:12828638-12828657 Msa0442740:intron 40.0%
TGCTCAACTTCATTCCGAAA+TGG - chr3_3:12828671-12828690 Msa0442740:intron 40.0%
GCTCAACTTCATTCCGAAAT+GGG - chr3_3:12828672-12828691 Msa0442740:intron 40.0%
ATTCCGAAATGGGAAACAGA+TGG - chr3_3:12828682-12828701 Msa0442740:intron 40.0%
TTCCGAAATGGGAAACAGAT+GGG - chr3_3:12828683-12828702 Msa0442740:intron 40.0%
GCTCAGATATGAATGTCTTC+TGG + chr3_3:12829386-12829405 None:intergenic 40.0%
GTCGAAGCCTAATAAAAAGG+AGG - chr3_3:12829526-12829545 Msa0442740:intron 40.0%
AAAAGGAGGTTTCCAATGTC+AGG - chr3_3:12829540-12829559 Msa0442740:intron 40.0%
ATGATGTGATCACCTGACAT+TGG + chr3_3:12829555-12829574 None:intergenic 40.0%
! AGTACCTCTCTCGTCTTTTA+AGG - chr3_3:12829938-12829957 Msa0442740:intron 40.0%
ATGTCCTTAAAAGACGAGAG+AGG + chr3_3:12829945-12829964 None:intergenic 40.0%
TAATAGGGATTCTGCATGTG+GGG + chr3_3:12830008-12830027 None:intergenic 40.0%
GTAATAGGGATTCTGCATGT+GGG + chr3_3:12830009-12830028 None:intergenic 40.0%
AGTAATAGGGATTCTGCATG+TGG + chr3_3:12830010-12830029 None:intergenic 40.0%
!!! TTTTGGAATGGAGCTCCTAA+TGG + chr3_3:12830042-12830061 None:intergenic 40.0%
GGAGCTAAATCTGTGTGAAA+AGG - chr3_3:12830223-12830242 Msa0442740:CDS 40.0%
CTAAATCTGTGTGAAAAGGG+AGG - chr3_3:12830227-12830246 Msa0442740:CDS 40.0%
GCATTCTTTACCTTTGATGG+AGG + chr3_3:12830345-12830364 None:intergenic 40.0%
! GGAATCAATGATGGTGATAG+AGG - chr3_3:12830596-12830615 Msa0442740:intron 40.0%
GCAGAAATATCAGGATTCTC+AGG + chr3_3:12830719-12830738 None:intergenic 40.0%
GATGGCACAGAATTGCAATA+TGG + chr3_3:12830776-12830795 None:intergenic 40.0%
CAGAACTATGATCCTGAACA+TGG + chr3_3:12830856-12830875 None:intergenic 40.0%
TACTTCTAAGCCAACATCCA+AGG - chr3_3:12830979-12830998 Msa0442740:intron 40.0%
! GTTTCTGGATATTGGAGTGA+AGG + chr3_3:12831022-12831041 None:intergenic 40.0%
TCACTCCAATATCCAGAAAC+CGG - chr3_3:12831022-12831041 Msa0442740:intron 40.0%
ACATCAACAGACTCATTCAG+TGG + chr3_3:12831082-12831101 None:intergenic 40.0%
TCTACTACAACTCCTGTTGA+CGG - chr3_3:12831247-12831266 Msa0442740:intron 40.0%
!! TAACCACTAAAGTTCTGAGC+AGG + chr3_3:12831412-12831431 None:intergenic 40.0%
!! AGATCGGTTTTCACTGTTTG+GGG + chr3_3:12831740-12831759 None:intergenic 40.0%
! TCTGAAGCTAACATGACATC+TGG + chr3_3:12831787-12831806 None:intergenic 40.0%
CCCAACAGATTATAAGCATG+TGG - chr3_3:12831861-12831880 Msa0442740:intron 40.0%
GCCACATGCTTATAATCTGT+TGG + chr3_3:12831865-12831884 None:intergenic 40.0%
ACAGATTATAAGCATGTGGC+TGG - chr3_3:12831865-12831884 Msa0442740:intron 40.0%
ATTATAAGCATGTGGCTGGT+GGG - chr3_3:12831869-12831888 Msa0442740:intron 40.0%
GGGACTTATTCTTCAAGTAC+AGG - chr3_3:12831889-12831908 Msa0442740:intron 40.0%
ATGACATGGCACTTGAACTT+TGG - chr3_3:12832111-12832130 Msa0442740:intron 40.0%
AGAGAATTGGAAGAGAGGAG+AGG + chr3_3:12826797-12826816 None:intergenic 45.0%
! GCGAAGAAAGAGCACAACAT+TGG + chr3_3:12826942-12826961 None:intergenic 45.0%
TGTTGTGCTCTTTCTTCGCT+CGG - chr3_3:12826943-12826962 Msa0442740:three_prime_UTR 45.0%
ATCCAGACCGAAGTTTGTGA+AGG + chr3_3:12826983-12827002 None:intergenic 45.0%
ATGTAGCCGACCTAACTTAC+TGG - chr3_3:12827720-12827739 Msa0442740:CDS 45.0%
TGTAGCCGACCTAACTTACT+GGG - chr3_3:12827721-12827740 Msa0442740:CDS 45.0%
CGACCTAACTTACTGGGATA+AGG - chr3_3:12827727-12827746 Msa0442740:CDS 45.0%
GCAATGATCAAACACGGTCA+CGG - chr3_3:12828403-12828422 Msa0442740:CDS 45.0%
!! GGTAACGGAGGAAGTGTTAA+TGG - chr3_3:12828438-12828457 Msa0442740:CDS 45.0%
!! AACGGAGGAAGTGTTAATGG+TGG - chr3_3:12828441-12828460 Msa0442740:CDS 45.0%
!! GGTGGAGTTGTTCTGAAGAA+AGG - chr3_3:12828459-12828478 Msa0442740:intron 45.0%
!! GAACGCTGTTCAGAAGCATT+CGG - chr3_3:12828548-12828567 Msa0442740:intron 45.0%
!! AACGCTGTTCAGAAGCATTC+GGG - chr3_3:12828549-12828568 Msa0442740:intron 45.0%
TGCCCATCTGTTTCCCATTT+CGG + chr3_3:12828688-12828707 None:intergenic 45.0%
CTGACATCACCTATGGCAAT+TGG + chr3_3:12828827-12828846 None:intergenic 45.0%
CACATCACTGACATCACCTA+TGG + chr3_3:12828834-12828853 None:intergenic 45.0%
AATAGGGATTCTGCATGTGG+GGG + chr3_3:12830007-12830026 None:intergenic 45.0%
AACTGTGTCCCAAATACTCC+TGG - chr3_3:12830290-12830309 Msa0442740:CDS 45.0%
TTCGTTTGCGAGCAACGAAA+GGG - chr3_3:12830549-12830568 Msa0442740:exon 45.0%
GCAACGAAAGGGAGTAAACA+TGG - chr3_3:12830560-12830579 Msa0442740:exon 45.0%
AAAGGGAGTAAACATGGCCA+AGG - chr3_3:12830566-12830585 Msa0442740:intron 45.0%
TTGCATTCTCCTCTTGATCC+TGG - chr3_3:12830899-12830918 Msa0442740:intron 45.0%
TACCGCCATTCCGTATCAAA+TGG - chr3_3:12830947-12830966 Msa0442740:intron 45.0%
! TGCCATTTGATACGGAATGG+CGG + chr3_3:12830952-12830971 None:intergenic 45.0%
!! GGATGTTGGCTTAGAAGTAG+AGG + chr3_3:12830978-12830997 None:intergenic 45.0%
AACTTCACAGCCTTGGATGT+TGG + chr3_3:12830992-12831011 None:intergenic 45.0%
AACATCCAAGGCTGTGAAGT+TGG - chr3_3:12830991-12831010 Msa0442740:intron 45.0%
! CAAAGCCGGTTTCTGGATAT+TGG + chr3_3:12831030-12831049 None:intergenic 45.0%
! CAATATCCAGAAACCGGCTT+TGG - chr3_3:12831028-12831047 Msa0442740:intron 45.0%
AGACTCATTCAGTGGAGATG+GGG + chr3_3:12831074-12831093 None:intergenic 45.0%
CAGACTCATTCAGTGGAGAT+GGG + chr3_3:12831075-12831094 None:intergenic 45.0%
ACAGACTCATTCAGTGGAGA+TGG + chr3_3:12831076-12831095 None:intergenic 45.0%
! TCGAGCGTGCCACTATTATT+TGG + chr3_3:12831157-12831176 None:intergenic 45.0%
AAATAATAGTGGCACGCTCG+AGG - chr3_3:12831156-12831175 Msa0442740:intron 45.0%
AGGATTGAGGTTGCACCAAA+GGG + chr3_3:12831337-12831356 None:intergenic 45.0%
ATGGCACTCATTCAGGATTG+AGG + chr3_3:12831350-12831369 None:intergenic 45.0%
TAACAGCATGGCACTCATTC+AGG + chr3_3:12831357-12831376 None:intergenic 45.0%
ACACCTGCTCAGAACTTTAG+TGG - chr3_3:12831406-12831425 Msa0442740:intron 45.0%
! CACTGTTTGGGGTAGAAACT+TGG + chr3_3:12831729-12831748 None:intergenic 45.0%
ATTGGCATGAGCAGTGCTAT+GGG - chr3_3:12831806-12831825 Msa0442740:intron 45.0%
GATTATAAGCATGTGGCTGG+TGG - chr3_3:12831868-12831887 Msa0442740:intron 45.0%
!!! TTATTTAATTTTAGTTATTT+TGG - chr3_3:12827128-12827147 Msa0442740:CDS 5.0%
!! ATAATTATGTTAATATATTT+CGG + chr3_3:12829461-12829480 None:intergenic 5.0%
!! AGGAGGTGGTGGAAATGGAA+TGG + chr3_3:12826777-12826796 None:intergenic 50.0%
GAATTGGAAGAGAGGAGAGG+AGG + chr3_3:12826794-12826813 None:intergenic 50.0%
CTCCTTCACAAACTTCGGTC+TGG - chr3_3:12826978-12826997 Msa0442740:exon 50.0%
!! TTGTTCTGAAGAAAGGGCCG+TGG - chr3_3:12828466-12828485 Msa0442740:intron 50.0%
GTTGACTACGTCAGGAAGCA+TGG - chr3_3:12828513-12828532 Msa0442740:intron 50.0%
! TACGTCAGGAAGCATGGAGA+AGG - chr3_3:12828519-12828538 Msa0442740:intron 50.0%
AAGGACATGCTACTGTCGGA+TGG - chr3_3:12829957-12829976 Msa0442740:intron 50.0%
AGGACATGCTACTGTCGGAT+GGG - chr3_3:12829958-12829977 Msa0442740:intron 50.0%
ATTGGAATACCCGGACCAAG+AGG - chr3_3:12830489-12830508 Msa0442740:CDS 50.0%
! CGAACTTCTGGAGGATAGAG+TGG + chr3_3:12830533-12830552 None:intergenic 50.0%
GTTGCTCGCAAACGAACTTC+TGG + chr3_3:12830545-12830564 None:intergenic 50.0%
GTTCGTTTGCGAGCAACGAA+AGG - chr3_3:12830548-12830567 Msa0442740:exon 50.0%
AGTAAACATGGCCAAGGCAC+TGG - chr3_3:12830572-12830591 Msa0442740:intron 50.0%
!! CATTGATTCCACCAGTGCCT+TGG + chr3_3:12830586-12830605 None:intergenic 50.0%
!! GGCACTGGTGGAATCAATGA+TGG - chr3_3:12830587-12830606 Msa0442740:intron 50.0%
! TATCCAGAAACCGGCTTTGG+TGG - chr3_3:12831031-12831050 Msa0442740:intron 50.0%
GACTCATTCAGTGGAGATGG+GGG + chr3_3:12831073-12831092 None:intergenic 50.0%
AATCAGTCTCCTCTGCCACA+TGG - chr3_3:12831106-12831125 Msa0442740:intron 50.0%
ACTACAACTCCTGTTGACGG+AGG - chr3_3:12831250-12831269 Msa0442740:intron 50.0%
TTGCACCAAAGGGAGATGCA+GGG + chr3_3:12831327-12831346 None:intergenic 50.0%
CAGGATTGAGGTTGCACCAA+AGG + chr3_3:12831338-12831357 None:intergenic 50.0%
! GAAGTCTTGCATGGTGCCAA+AGG + chr3_3:12831515-12831534 None:intergenic 50.0%
GGGGTAGAAACTTGGTCAAC+AGG + chr3_3:12831721-12831740 None:intergenic 50.0%
GATTGGCATGAGCAGTGCTA+TGG - chr3_3:12831805-12831824 Msa0442740:intron 50.0%
! TGTTGGGTTGTCACTAGCCT+CGG + chr3_3:12831848-12831867 None:intergenic 50.0%
!! AGGAGAGGAGGTGGTGGAAA+TGG + chr3_3:12826782-12826801 None:intergenic 55.0%
TTGGAAGAGAGGAGAGGAGG+TGG + chr3_3:12826791-12826810 None:intergenic 55.0%
!!! TTAGTTTTGCGTGGGGGACC+GGG + chr3_3:12828207-12828226 None:intergenic 55.0%
!!! CTTAGTTTTGCGTGGGGGAC+CGG + chr3_3:12828208-12828227 None:intergenic 55.0%
CAAACACGGTCACGGTCGAA+TGG - chr3_3:12828411-12828430 Msa0442740:CDS 55.0%
CGGTCGAATGGTGAGGGTAA+CGG - chr3_3:12828423-12828442 Msa0442740:CDS 55.0%
! TCGAATGGTGAGGGTAACGG+AGG - chr3_3:12828426-12828445 Msa0442740:CDS 55.0%
GCGTCTTCTGCAGATGTCCA+CGG + chr3_3:12828486-12828505 None:intergenic 55.0%
! GGAAGCATGGAGAAGGCAAC+TGG - chr3_3:12828526-12828545 Msa0442740:intron 55.0%
CATTCGGGCTTGTCTCGTTG+TGG - chr3_3:12828564-12828583 Msa0442740:intron 55.0%
GGGAAACAGATGGGCACGTA+TGG - chr3_3:12828692-12828711 Msa0442740:intron 55.0%
GGACATGCTACTGTCGGATG+GGG - chr3_3:12829959-12829978 Msa0442740:intron 55.0%
GATCAAATCCCCCATGGCTG+TGG + chr3_3:12829985-12830004 None:intergenic 55.0%
GCTCGCAAACGAACTTCTGG+AGG + chr3_3:12830542-12830561 None:intergenic 55.0%
!! AAACATGGCCAAGGCACTGG+TGG - chr3_3:12830575-12830594 Msa0442740:intron 55.0%
GAGTTATGTGAGGGGAGACC+AGG + chr3_3:12830920-12830939 None:intergenic 55.0%
GAGCTCCAACTTCACAGCCT+TGG + chr3_3:12830999-12831018 None:intergenic 55.0%
! AGAAACCGGCTTTGGTGGCT+GGG - chr3_3:12831036-12831055 Msa0442740:intron 55.0%
GAACTCTCACCTCCGTCAAC+AGG + chr3_3:12831262-12831281 None:intergenic 55.0%
ACTGACCCTGCATCTCCCTT+TGG - chr3_3:12831319-12831338 Msa0442740:intron 55.0%
GTTGCACCAAAGGGAGATGC+AGG + chr3_3:12831328-12831347 None:intergenic 55.0%
GCACGAGAAGAACATGACCG+AGG - chr3_3:12831828-12831847 Msa0442740:intron 55.0%
! AGGGGGTCGCTTTATGCACA+TGG - chr3_3:12831909-12831928 Msa0442740:intron 55.0%
GAAGAGAGGAGAGGAGGTGG+TGG + chr3_3:12826788-12826807 None:intergenic 60.0%
TGTCGTGACGCGACATGTCC+CGG - chr3_3:12828186-12828205 Msa0442740:CDS 60.0%
ACGGTCACGGTCGAATGGTG+AGG - chr3_3:12828416-12828435 Msa0442740:CDS 60.0%
CGGTCACGGTCGAATGGTGA+GGG - chr3_3:12828417-12828436 Msa0442740:CDS 60.0%
GTGGGGGATCAAATCCCCCA+TGG + chr3_3:12829991-12830010 None:intergenic 60.0%
GAGGGGAGACCAGGATCAAG+AGG + chr3_3:12830911-12830930 None:intergenic 60.0%
! CAGCCACCAAAGCCGGTTTC+TGG + chr3_3:12831037-12831056 None:intergenic 60.0%
! CAGAAACCGGCTTTGGTGGC+TGG - chr3_3:12831035-12831054 Msa0442740:intron 60.0%
! GAAACCGGCTTTGGTGGCTG+GGG - chr3_3:12831037-12831056 Msa0442740:intron 60.0%
TCTTGCGCACCATGTGGCAG+AGG + chr3_3:12831118-12831137 None:intergenic 60.0%
CCACATGGTGCGCAAGAGTC+CGG - chr3_3:12831121-12831140 Msa0442740:intron 60.0%
TCGGATGGGGCCACAGCCAT+GGG - chr3_3:12829972-12829991 Msa0442740:intron 65.0%
CCGATGACGCCTCTTGGTCC+GGG + chr3_3:12830501-12830520 None:intergenic 65.0%
!! CCCGGACCAAGAGGCGTCAT+CGG - chr3_3:12830498-12830517 Msa0442740:CDS 65.0%
CCCGATGACGCCTCTTGGTC+CGG + chr3_3:12830502-12830521 None:intergenic 65.0%
!! CCGGACCAAGAGGCGTCATC+GGG - chr3_3:12830499-12830518 Msa0442740:CDS 65.0%
!! ACCAAGAGGCGTCATCGGGC+TGG - chr3_3:12830503-12830522 Msa0442740:CDS 65.0%
ACCACCCCAGCCACCAAAGC+CGG + chr3_3:12831044-12831063 None:intergenic 65.0%
CCGGACTCTTGCGCACCATG+TGG + chr3_3:12831124-12831143 None:intergenic 65.0%
GTCGGATGGGGCCACAGCCA+TGG - chr3_3:12829971-12829990 Msa0442740:intron 70.0%
CGGATGGGGCCACAGCCATG+GGG - chr3_3:12829973-12829992 Msa0442740:intron 70.0%
GGATGGGGCCACAGCCATGG+GGG - chr3_3:12829974-12829993 Msa0442740:intron 70.0%
GCCAGCCCGATGACGCCTCT+TGG + chr3_3:12830507-12830526 None:intergenic 70.0%
! ACCGGCTTTGGTGGCTGGGG+TGG - chr3_3:12831040-12831059 Msa0442740:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 12826772 12832153 12826772 ID=Msa0442740;Name=Msa0442740
chr3_3 mRNA 12826772 12832153 12826772 ID=Msa0442740-mRNA-1;Parent=Msa0442740;Name=Msa0442740-mRNA-1;_AED=0.23;_eAED=0.23;_QI=369|1|1|1|0.4|0.33|6|217|523
chr3_3 exon 12826772 12827227 12826772 ID=Msa0442740-mRNA-1:exon:2762;Parent=Msa0442740-mRNA-1
chr3_3 exon 12827498 12828470 12827498 ID=Msa0442740-mRNA-1:exon:2761;Parent=Msa0442740-mRNA-1
chr3_3 exon 12830203 12830579 12830203 ID=Msa0442740-mRNA-1:exon:2760;Parent=Msa0442740-mRNA-1
chr3_3 exon 12831523 12831671 12831523 ID=Msa0442740-mRNA-1:exon:2759;Parent=Msa0442740-mRNA-1
chr3_3 exon 12831931 12832105 12831931 ID=Msa0442740-mRNA-1:exon:2758;Parent=Msa0442740-mRNA-1
chr3_3 exon 12832126 12832153 12832126 ID=Msa0442740-mRNA-1:exon:2757;Parent=Msa0442740-mRNA-1
chr3_3 five_prime_UTR 12832126 12832153 12832126 ID=Msa0442740-mRNA-1:five_prime_utr;Parent=Msa0442740-mRNA-1
chr3_3 five_prime_UTR 12831931 12832105 12831931 ID=Msa0442740-mRNA-1:five_prime_utr;Parent=Msa0442740-mRNA-1
chr3_3 five_prime_UTR 12831523 12831671 12831523 ID=Msa0442740-mRNA-1:five_prime_utr;Parent=Msa0442740-mRNA-1
chr3_3 five_prime_UTR 12830563 12830579 12830563 ID=Msa0442740-mRNA-1:five_prime_utr;Parent=Msa0442740-mRNA-1
chr3_3 CDS 12830203 12830562 12830203 ID=Msa0442740-mRNA-1:cds;Parent=Msa0442740-mRNA-1
chr3_3 CDS 12827498 12828470 12827498 ID=Msa0442740-mRNA-1:cds;Parent=Msa0442740-mRNA-1
chr3_3 CDS 12826989 12827227 12826989 ID=Msa0442740-mRNA-1:cds;Parent=Msa0442740-mRNA-1
chr3_3 three_prime_UTR 12826772 12826988 12826772 ID=Msa0442740-mRNA-1:three_prime_utr;Parent=Msa0442740-mRNA-1
Gene Sequence

>Msa0442740

ATGAGTCGAGTGAAAAATGAGATTGAAGATGATATGCTCTGCAATGATCAAACACGGTCACGGTCGAATGGTGAGGGTAACGGAGGAAGTGTTAATGGTGGAGTTGTTCTGAAGAAAGGGCCGTGGACATCTGCAGAAGACGCTATTTTGGTTGACTACGTCAGGAAGCATGGAGAAGGCAACTGGAACGCTGTTCAGAAGCATTCGGGCTTGTCTCGTTGTGGAAAAAGTTGCCGTCTTAGATGGGCAAATCACTTAAGGCCAAATTTAAAGAAAGGATCATTTACTGCTGATGAGGAGCATTTAATTGCTCAACTTCATTCCGAAATGGGAAACAGATGGGCACGTATGGCTGCGCACTTGCCTGGTCGTACAGATAATGAAATAAAGAACTATTGGAATACCCGGACCAAGAGGCGTCATCGGGCTGGCTTGCCACTCTATCCTCCAGAAGTTCGTTTGCGAGCAACGAAAGGGAGTAAACATGGCCAAGGCACTGGTGGAATCAATGATGGTGATAGAGGGCATCATGATTTCTTGCCGAAAAACAACTATGAGATGCATGATGCAATATTTAACAATTTGAAGGAAAATCAGGGGATCTTACCTATTACAATTTTGCCTGAGAATCCTGATATTTCTGCTAATAGCATTATGCGAAACGGTCTTGATTCTCCTCCATATTGCAATTCTGTGCCATCAACAATGTCTTTTCTTGGTTCAAGTGGAACAAACAAGAATTGGTTTTATCCCTTTTACCATGTTCAGGATCATAGTTCTGATAAGACTGTACAATCTTTCGGATTGCATTCTCCTCTTGATCCTGGTCTCCCCTCACATAACTCAATGTATTACCGCCATTCCGTATCAAATGGCAATTCCTCTACTTCTAAGCCAACATCCAAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAAACCGGCTTTGGTGGCTGGGGTGGTAACTTTCCCCCATCTCCACTGAATGAGTCTGTTGATGTATTCAATCAGTCTCCTCTGCCACATGGTGCGCAAGAGTCCGGTTGTTCTTCACCAAATAATAGTGGCACGCTCGAGGCCATTATTTATCAGAAGAAGACACTTCCAAATTCAAATAACAATTGTTCTGACAAGAGTTCACATTCATCTACTACAACTCCTGTTGACGGAGGTGAGAGTTCTGCTTTGAACATGAATGAGACAGAATGGGATGACTACACTGACCCTGCATCTCCCTTTGGTGCAACCTCAATCCTGAATGAGTGCCATGCTGTTAACACCAATACAAACTCATGGGATAAATTGACACCTGCTCAGAACTTTAGTGGCAGCAATGTTAAATATGAGCCTGTTGACCAAGTTTCTACCCCAAACAGTGAAAACCGATCTTTGTCTATGTTGAACATCACTTGGCCAGATGTCATGTTAGCTTCAGATTGGCATGAGCAGTGCTATGGGCACGAGAAGAACATGACCGAGGCTAGTGACAACCCAACAGATTATAAGCATGTGGCTGGTGGGACTTATTCTTCAAGTACAGGGGGTCGCTTTATGCACATGGCATGA
Protein sequence

>Msa0442740

MSRVKNEIEDDMLCNDQTRSRSNGEGNGGSVNGGVVLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGSFTADEEHLIAQLHSEMGNRWARMAAHLPGRTDNEIKNYWNTRTKRRHRAGLPLYPPEVRLRATKGSKHGQGTGGINDGDRGHHDFLPKNNYEMHDAIFNNLKENQGILPITILPENPDISANSIMRNGLDSPPYCNSVPSTMSFLGSSGTNKNWFYPFYHVQDHSSDKTVQSFGLHSPLDPGLPSHNSMYYRHSVSNGNSSTSKPTSKAVKLELPSLQYPETGFGGWGGNFPPSPLNESVDVFNQSPLPHGAQESGCSSPNNSGTLEAIIYQKKTLPNSNNNCSDKSSHSSTTTPVDGGESSALNMNETEWDDYTDPASPFGATSILNECHAVNTNTNSWDKLTPAQNFSGSNVKYEPVDQVSTPNSENRSLSMLNITWPDVMLASDWHEQCYGHEKNMTEASDNPTDYKHVAGGTYSSSTGGRFMHMA*