Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0446720 | XP_024626574.1 | 63.750 | 320 | 42 | 6 | 1 | 306 | 1 | 260 | 6.00e-120 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0446720 | A0A072TYR1 | 64.151 | 318 | 45 | 6 | 1 | 304 | 1 | 263 | 6.29e-119 | 361 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0446720 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0446720 | MtrunA17_Chr2g0287651 | 57.672 | 189 | 57 | 3 | 136 | 311 | 47 | 225 | 1.23e-65 | 223 |
| Msa0446720 | MtrunA17_Chr1g0203051 | 32.314 | 229 | 124 | 6 | 111 | 311 | 4 | 229 | 5.94e-25 | 106 |
| Msa0446720 | MtrunA17_Chr8g0389811 | 37.815 | 119 | 66 | 3 | 142 | 252 | 48 | 166 | 1.33e-14 | 72.0 |
| Msa0446720 | MtrunA17_Chr6g0479721 | 48.214 | 112 | 46 | 3 | 1 | 111 | 1 | 101 | 6.82e-12 | 62.4 |
| Msa0446720 | MtrunA17_Chr6g0473421 | 41.250 | 80 | 43 | 1 | 170 | 245 | 51 | 130 | 2.98e-11 | 61.2 |
| Msa0446720 | MtrunA17_Chr1g0171741 | 26.667 | 225 | 134 | 7 | 81 | 291 | 55 | 262 | 4.82e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 70 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.057115 | 3_3:-23308093 | Msa0446720:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 3_3:-23307146 | Msa0446720:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 3_3:-23307305 | Msa0446720:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.290641 | 3_3:-23307219 | Msa0446720:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 3_3:-23307856 | Msa0446720:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 3_3:-23307561 | Msa0446720:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 3_3:-23307554 | Msa0446720:CDS |
| AAACAACAACAATGACTTTA+CGG | 0.325210 | 3_3:-23308100 | Msa0446720:CDS |
| CTGTTGGGAAGAGTGATATT+AGG | 0.331835 | 3_3:-23307468 | Msa0446720:CDS |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.373380 | 3_3:+23307245 | None:intergenic |
| AGCATTTATCAAAGTTAGAT+AGG | 0.402473 | 3_3:-23307378 | Msa0446720:CDS |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 3_3:-23307145 | Msa0446720:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 3_3:-23308072 | Msa0446720:CDS |
| GCTCAGAAGGGTGGATATCC+TGG | 0.409450 | 3_3:-23307112 | Msa0446720:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 3_3:-23307832 | Msa0446720:CDS |
| GCGAAGCTGCTGAATCTATA+CGG | 0.434450 | 3_3:-23306246 | Msa0446720:CDS |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 3_3:-23307454 | Msa0446720:CDS |
| GGGATACATGGTGGCTCAGA+AGG | 0.464555 | 3_3:-23307125 | Msa0446720:CDS |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 3_3:+23307319 | None:intergenic |
| GAAACATATCCGATCATTGT+TGG | 0.469215 | 3_3:-23308024 | Msa0446720:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 3_3:-23307184 | Msa0446720:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 3_3:-23308058 | Msa0446720:CDS |
| CAGCACATGGGATGAAAACC+TGG | 0.484772 | 3_3:+23306294 | None:intergenic |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 3_3:-23307841 | Msa0446720:CDS |
| AAACATATCCGATCATTGTT+GGG | 0.491804 | 3_3:-23308023 | Msa0446720:CDS |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 3_3:+23308066 | None:intergenic |
| GCAGTATGTATGTAACAAGC+AGG | 0.502107 | 3_3:-23307416 | Msa0446720:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 3_3:-23307596 | Msa0446720:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 3_3:-23307607 | Msa0446720:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 3_3:-23307568 | Msa0446720:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 3_3:-23308015 | Msa0446720:CDS |
| ACAGATGAGTTGTCAGCACA+TGG | 0.544597 | 3_3:+23306281 | None:intergenic |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 3_3:+23308015 | None:intergenic |
| GGAACATGATTACGGTTCTA+CGG | 0.552732 | 3_3:-23308064 | Msa0446720:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 3_3:-23307137 | Msa0446720:CDS |
| TGTAAATGCACAACATTGGT+TGG | 0.560698 | 3_3:+23307232 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 3_3:-23307591 | Msa0446720:CDS |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 3_3:-23307121 | Msa0446720:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.573961 | 3_3:-23308018 | Msa0446720:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.579998 | 3_3:-23307787 | Msa0446720:CDS |
| GATGAGCGATATGATGAAAG+TGG | 0.580449 | 3_3:-23307889 | Msa0446720:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 3_3:-23307727 | Msa0446720:CDS |
| GATGAACGTGAAGGTGATGA+AGG | 0.589312 | 3_3:-23307742 | Msa0446720:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 3_3:-23307820 | Msa0446720:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.592548 | 3_3:-23307868 | Msa0446720:CDS |
| GAAGGTGAACGTGATGAAGG+TGG | 0.592672 | 3_3:-23307724 | Msa0446720:CDS |
| CAGTATGTATGTAACAAGCA+GGG | 0.595708 | 3_3:-23307415 | Msa0446720:CDS |
| GGATACATGGTGGCTCAGAA+GGG | 0.612576 | 3_3:-23307124 | Msa0446720:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 3_3:+23307189 | None:intergenic |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 3_3:-23307646 | Msa0446720:CDS |
| AGGGTGTAAATGCACAACAT+TGG | 0.627835 | 3_3:+23307228 | None:intergenic |
| TGCACAACATTGGTTGGAGT+AGG | 0.634569 | 3_3:+23307238 | None:intergenic |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 3_3:-23307333 | Msa0446720:CDS |
| GGTGAACGTGATGAAGGTGG+AGG | 0.647603 | 3_3:-23307721 | Msa0446720:CDS |
| AGTATGTATGTAACAAGCAG+GGG | 0.650597 | 3_3:-23307414 | Msa0446720:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 3_3:-23307602 | Msa0446720:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 3_3:-23307655 | Msa0446720:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | 3_3:-23307134 | Msa0446720:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.679569 | 3_3:-23307946 | Msa0446720:intron |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 3_3:-23307438 | Msa0446720:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.689839 | 3_3:-23307700 | Msa0446720:CDS |
| CAGATGAGTTGTCAGCACAT+GGG | 0.694522 | 3_3:+23306282 | None:intergenic |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 3_3:-23307706 | Msa0446720:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 3_3:-23307206 | Msa0446720:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 3_3:-23307865 | Msa0446720:CDS |
| ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | 3_3:-23307169 | Msa0446720:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 3_3:-23307661 | Msa0446720:intron |
| GGTGAAAGTGATGAAAGTGA+AGG | 0.717258 | 3_3:-23307766 | Msa0446720:CDS |
| AGTGAATGTGATGAAAGTCA+AGG | 0.717258 | 3_3:-23307796 | Msa0446720:CDS |
| AGTGAAGGTGATGAACGTGA+AGG | 0.728116 | 3_3:-23307751 | Msa0446720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr3_3:23306822-23306841 | Msa0446720:intron | 15.0% |
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr3_3:23306822-23306841 | Msa0446720:intron | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr3_3:23307184-23307203 | Msa0446720:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr3_3:23307185-23307204 | Msa0446720:CDS | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr3_3:23307579-23307598 | Msa0446720:CDS | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr3_3:23307580-23307599 | Msa0446720:CDS | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | - | chr3_3:23307925-23307944 | Msa0446720:intron | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr3_3:23307184-23307203 | Msa0446720:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr3_3:23307185-23307204 | Msa0446720:CDS | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr3_3:23307579-23307598 | Msa0446720:CDS | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr3_3:23307580-23307599 | Msa0446720:CDS | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | - | chr3_3:23307925-23307944 | Msa0446720:intron | 20.0% |
| ! | AAACAACAACAATGACTTTA+CGG | - | chr3_3:23306230-23306249 | Msa0446720:CDS | 25.0% |
| !! | AATTTTACGAAGAATACTCA+AGG | - | chr3_3:23306408-23306427 | Msa0446720:intron | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+GGG | - | chr3_3:23306409-23306428 | Msa0446720:intron | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr3_3:23306762-23306781 | Msa0446720:intron | 25.0% |
| ! | AGCATTTATCAAAGTTAGAT+AGG | - | chr3_3:23306952-23306971 | Msa0446720:intron | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | chr3_3:23307283-23307302 | Msa0446720:intron | 25.0% |
| !!! | ACTAGTTTTCTAGATTGTAT+GGG | - | chr3_3:23307608-23307627 | Msa0446720:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+TGG | - | chr3_3:23307793-23307812 | Msa0446720:CDS | 25.0% |
| !! | ATGATGAATTTGAAGAGTTT+TGG | - | chr3_3:23307816-23307835 | Msa0446720:CDS | 25.0% |
| !! | TGATGAATTTGAAGAGTTTT+GGG | - | chr3_3:23307817-23307836 | Msa0446720:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | - | chr3_3:23307968-23307987 | Msa0446720:CDS | 25.0% |
| !!! | TTATAGCTGATTTTAAATCC+AGG | - | chr3_3:23308018-23308037 | Msa0446720:CDS | 25.0% |
| ! | AAACAACAACAATGACTTTA+CGG | - | chr3_3:23306230-23306249 | Msa0446720:CDS | 25.0% |
| !! | AATTTTACGAAGAATACTCA+AGG | - | chr3_3:23306408-23306427 | Msa0446720:intron | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+GGG | - | chr3_3:23306409-23306428 | Msa0446720:intron | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr3_3:23306762-23306781 | Msa0446720:intron | 25.0% |
| ! | AGCATTTATCAAAGTTAGAT+AGG | - | chr3_3:23306952-23306971 | Msa0446720:intron | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | chr3_3:23307283-23307302 | Msa0446720:intron | 25.0% |
| !!! | ACTAGTTTTCTAGATTGTAT+GGG | - | chr3_3:23307608-23307627 | Msa0446720:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+TGG | - | chr3_3:23307793-23307812 | Msa0446720:CDS | 25.0% |
| !! | ATGATGAATTTGAAGAGTTT+TGG | - | chr3_3:23307816-23307835 | Msa0446720:CDS | 25.0% |
| !! | TGATGAATTTGAAGAGTTTT+GGG | - | chr3_3:23307817-23307836 | Msa0446720:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | - | chr3_3:23307968-23307987 | Msa0446720:CDS | 25.0% |
| !!! | TTATAGCTGATTTTAAATCC+AGG | - | chr3_3:23308018-23308037 | Msa0446720:CDS | 25.0% |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr3_3:23306237-23306256 | Msa0446720:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr3_3:23306307-23306326 | Msa0446720:CDS | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr3_3:23307041-23307060 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr3_3:23307055-23307074 | Msa0446720:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr3_3:23307056-23307075 | Msa0446720:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr3_3:23307193-23307212 | Msa0446720:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr3_3:23307362-23307381 | None:intergenic | 30.0% | |
| !! | ACGTTTGAAATGCCTATTTT+GGG | - | chr3_3:23307397-23307416 | Msa0446720:CDS | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr3_3:23307434-23307453 | Msa0446720:CDS | 30.0% |
| !!! | GACTAGTTTTCTAGATTGTA+TGG | - | chr3_3:23307607-23307626 | Msa0446720:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr3_3:23307757-23307776 | Msa0446720:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr3_3:23307761-23307780 | Msa0446720:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr3_3:23307818-23307837 | Msa0446720:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr3_3:23307819-23307838 | Msa0446720:CDS | 30.0% |
| ! | TAGACGTAGTTCATATGTTT+TGG | + | chr3_3:23307887-23307906 | None:intergenic | 30.0% |
| AAGAGTTATGTTAGGAAGAA+AGG | - | chr3_3:23307933-23307952 | Msa0446720:intron | 30.0% | |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr3_3:23306237-23306256 | Msa0446720:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr3_3:23306307-23306326 | Msa0446720:CDS | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr3_3:23307041-23307060 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr3_3:23307055-23307074 | Msa0446720:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr3_3:23307056-23307075 | Msa0446720:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr3_3:23307193-23307212 | Msa0446720:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr3_3:23307362-23307381 | None:intergenic | 30.0% | |
| !! | ACGTTTGAAATGCCTATTTT+GGG | - | chr3_3:23307397-23307416 | Msa0446720:CDS | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr3_3:23307434-23307453 | Msa0446720:CDS | 30.0% |
| !!! | GACTAGTTTTCTAGATTGTA+TGG | - | chr3_3:23307607-23307626 | Msa0446720:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr3_3:23307757-23307776 | Msa0446720:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr3_3:23307761-23307780 | Msa0446720:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr3_3:23307818-23307837 | Msa0446720:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr3_3:23307819-23307838 | Msa0446720:CDS | 30.0% |
| ! | TAGACGTAGTTCATATGTTT+TGG | + | chr3_3:23307887-23307906 | None:intergenic | 30.0% |
| AAGAGTTATGTTAGGAAGAA+AGG | - | chr3_3:23307933-23307952 | Msa0446720:intron | 30.0% | |
| GAAACATATCCGATCATTGT+TGG | - | chr3_3:23306306-23306325 | Msa0446720:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr3_3:23306417-23306436 | Msa0446720:intron | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr3_3:23306498-23306517 | Msa0446720:intron | 35.0% |
| AGTGAATGTGATGAAAGTCA+AGG | - | chr3_3:23306534-23306553 | Msa0446720:intron | 35.0% | |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | - | chr3_3:23306654-23306673 | Msa0446720:intron | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr3_3:23306723-23306742 | Msa0446720:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr3_3:23306769-23306788 | Msa0446720:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr3_3:23306776-23306795 | Msa0446720:intron | 35.0% | |
| TATAAGTACGGTAAGTGTCA+AGG | - | chr3_3:23306834-23306853 | Msa0446720:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr3_3:23306876-23306895 | Msa0446720:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr3_3:23306892-23306911 | Msa0446720:intron | 35.0% | |
| CAGTATGTATGTAACAAGCA+GGG | - | chr3_3:23306915-23306934 | Msa0446720:intron | 35.0% | |
| AGTATGTATGTAACAAGCAG+GGG | - | chr3_3:23306916-23306935 | Msa0446720:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr3_3:23307042-23307061 | None:intergenic | 35.0% |
| TGTAAATGCACAACATTGGT+TGG | + | chr3_3:23307101-23307120 | None:intergenic | 35.0% | |
| TGCATTTACACCCTGTTTAT+CGG | - | chr3_3:23307111-23307130 | Msa0446720:CDS | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr3_3:23307124-23307143 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr3_3:23307125-23307144 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | chr3_3:23307124-23307143 | Msa0446720:CDS | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr3_3:23307144-23307163 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr3_3:23307146-23307165 | Msa0446720:CDS | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr3_3:23307196-23307215 | Msa0446720:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr3_3:23307287-23307306 | Msa0446720:intron | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr3_3:23307369-23307388 | None:intergenic | 35.0% | |
| !! | GACGTTTGAAATGCCTATTT+TGG | - | chr3_3:23307396-23307415 | Msa0446720:CDS | 35.0% |
| !! | TTATTTCTGCTTTGGTGATG+TGG | - | chr3_3:23307442-23307461 | Msa0446720:CDS | 35.0% |
| CAAATATAACTGTGTGTGAG+TGG | + | chr3_3:23307538-23307557 | None:intergenic | 35.0% | |
| CACTCACACACAGTTATATT+TGG | - | chr3_3:23307536-23307555 | Msa0446720:CDS | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr3_3:23307547-23307566 | Msa0446720:CDS | 35.0% |
| ATTGCCTTGAGAAAAATCCA+TGG | - | chr3_3:23307857-23307876 | Msa0446720:CDS | 35.0% | |
| TTGCCTTGAGAAAAATCCAT+GGG | - | chr3_3:23307858-23307877 | Msa0446720:CDS | 35.0% | |
| ! | TATCCCATGGATTTTTCTCA+AGG | + | chr3_3:23307864-23307883 | None:intergenic | 35.0% |
| !!! | TCATATGTTTTGGTATCCCA+TGG | + | chr3_3:23307877-23307896 | None:intergenic | 35.0% |
| !! | AATTTTGATGAGGCAATGAG+AGG | - | chr3_3:23307978-23307997 | Msa0446720:CDS | 35.0% |
| GAAACATATCCGATCATTGT+TGG | - | chr3_3:23306306-23306325 | Msa0446720:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr3_3:23306417-23306436 | Msa0446720:intron | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr3_3:23306498-23306517 | Msa0446720:intron | 35.0% |
| AGTGAATGTGATGAAAGTCA+AGG | - | chr3_3:23306534-23306553 | Msa0446720:intron | 35.0% | |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | - | chr3_3:23306654-23306673 | Msa0446720:intron | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr3_3:23306723-23306742 | Msa0446720:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr3_3:23306769-23306788 | Msa0446720:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr3_3:23306776-23306795 | Msa0446720:intron | 35.0% | |
| TATAAGTACGGTAAGTGTCA+AGG | - | chr3_3:23306834-23306853 | Msa0446720:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr3_3:23306876-23306895 | Msa0446720:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr3_3:23306892-23306911 | Msa0446720:intron | 35.0% | |
| CAGTATGTATGTAACAAGCA+GGG | - | chr3_3:23306915-23306934 | Msa0446720:intron | 35.0% | |
| AGTATGTATGTAACAAGCAG+GGG | - | chr3_3:23306916-23306935 | Msa0446720:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr3_3:23307042-23307061 | None:intergenic | 35.0% |
| TGTAAATGCACAACATTGGT+TGG | + | chr3_3:23307101-23307120 | None:intergenic | 35.0% | |
| TGCATTTACACCCTGTTTAT+CGG | - | chr3_3:23307111-23307130 | Msa0446720:CDS | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr3_3:23307124-23307143 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr3_3:23307125-23307144 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | chr3_3:23307124-23307143 | Msa0446720:CDS | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr3_3:23307144-23307163 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr3_3:23307146-23307165 | Msa0446720:CDS | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr3_3:23307196-23307215 | Msa0446720:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr3_3:23307287-23307306 | Msa0446720:intron | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr3_3:23307369-23307388 | None:intergenic | 35.0% | |
| !! | GACGTTTGAAATGCCTATTT+TGG | - | chr3_3:23307396-23307415 | Msa0446720:CDS | 35.0% |
| !! | TTATTTCTGCTTTGGTGATG+TGG | - | chr3_3:23307442-23307461 | Msa0446720:CDS | 35.0% |
| CAAATATAACTGTGTGTGAG+TGG | + | chr3_3:23307538-23307557 | None:intergenic | 35.0% | |
| CACTCACACACAGTTATATT+TGG | - | chr3_3:23307536-23307555 | Msa0446720:CDS | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr3_3:23307547-23307566 | Msa0446720:CDS | 35.0% |
| ATTGCCTTGAGAAAAATCCA+TGG | - | chr3_3:23307857-23307876 | Msa0446720:CDS | 35.0% | |
| TTGCCTTGAGAAAAATCCAT+GGG | - | chr3_3:23307858-23307877 | Msa0446720:CDS | 35.0% | |
| ! | TATCCCATGGATTTTTCTCA+AGG | + | chr3_3:23307864-23307883 | None:intergenic | 35.0% |
| !!! | TCATATGTTTTGGTATCCCA+TGG | + | chr3_3:23307877-23307896 | None:intergenic | 35.0% |
| !! | AATTTTGATGAGGCAATGAG+AGG | - | chr3_3:23307978-23307997 | Msa0446720:CDS | 35.0% |
| !! | CTTTACGGATTTTGGTACAC+CGG | - | chr3_3:23306245-23306264 | Msa0446720:CDS | 40.0% |
| GTAGAACCGTAATCATGTTC+CGG | + | chr3_3:23306267-23306286 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr3_3:23306266-23306285 | Msa0446720:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr3_3:23306384-23306403 | Msa0446720:intron | 40.0% |
| GATGAGCGATATGATGAAAG+TGG | - | chr3_3:23306441-23306460 | Msa0446720:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr3_3:23306462-23306481 | Msa0446720:intron | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr3_3:23306465-23306484 | Msa0446720:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr3_3:23306489-23306508 | Msa0446720:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr3_3:23306510-23306529 | Msa0446720:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr3_3:23306543-23306562 | Msa0446720:intron | 40.0% | |
| GGTGAAAGTGATGAAAGTGA+AGG | - | chr3_3:23306564-23306583 | Msa0446720:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr3_3:23306669-23306688 | Msa0446720:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr3_3:23306728-23306747 | Msa0446720:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr3_3:23306734-23306753 | Msa0446720:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr3_3:23306739-23306758 | Msa0446720:intron | 40.0% |
| !! | AAGTGTCAAGGTTTTGCTGT+TGG | - | chr3_3:23306846-23306865 | Msa0446720:intron | 40.0% |
| !!! | AGTGTCAAGGTTTTGCTGTT+GGG | - | chr3_3:23306847-23306866 | Msa0446720:intron | 40.0% |
| CTGTTGGGAAGAGTGATATT+AGG | - | chr3_3:23306862-23306881 | Msa0446720:intron | 40.0% | |
| GCAGTATGTATGTAACAAGC+AGG | - | chr3_3:23306914-23306933 | Msa0446720:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr3_3:23307025-23307044 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr3_3:23307025-23307044 | Msa0446720:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr3_3:23307026-23307045 | Msa0446720:intron | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | + | chr3_3:23307105-23307124 | None:intergenic | 40.0% | |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr3_3:23307161-23307180 | Msa0446720:CDS | 40.0% |
| GAATATTCTGCCACTGATGA+CGG | - | chr3_3:23307374-23307393 | Msa0446720:CDS | 40.0% | |
| !! | AAATGCCTATTTTGGGCAGA+TGG | - | chr3_3:23307404-23307423 | Msa0446720:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr3_3:23307490-23307509 | Msa0446720:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr3_3:23307502-23307521 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr3_3:23307503-23307522 | Msa0446720:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr3_3:23307644-23307663 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr3_3:23307641-23307660 | Msa0446720:CDS | 40.0% | |
| !! | AGATGGTGATGGTTCTATGA+GGG | - | chr3_3:23307658-23307677 | Msa0446720:intron | 40.0% |
| GCATCTGAACAAGAATGCTA+TGG | - | chr3_3:23307730-23307749 | Msa0446720:CDS | 40.0% | |
| !! | CTTTACGGATTTTGGTACAC+CGG | - | chr3_3:23306245-23306264 | Msa0446720:CDS | 40.0% |
| GTAGAACCGTAATCATGTTC+CGG | + | chr3_3:23306267-23306286 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr3_3:23306266-23306285 | Msa0446720:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr3_3:23306384-23306403 | Msa0446720:intron | 40.0% |
| GATGAGCGATATGATGAAAG+TGG | - | chr3_3:23306441-23306460 | Msa0446720:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr3_3:23306462-23306481 | Msa0446720:intron | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr3_3:23306465-23306484 | Msa0446720:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr3_3:23306489-23306508 | Msa0446720:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr3_3:23306510-23306529 | Msa0446720:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr3_3:23306543-23306562 | Msa0446720:intron | 40.0% | |
| GGTGAAAGTGATGAAAGTGA+AGG | - | chr3_3:23306564-23306583 | Msa0446720:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr3_3:23306669-23306688 | Msa0446720:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr3_3:23306728-23306747 | Msa0446720:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr3_3:23306734-23306753 | Msa0446720:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr3_3:23306739-23306758 | Msa0446720:intron | 40.0% |
| !! | AAGTGTCAAGGTTTTGCTGT+TGG | - | chr3_3:23306846-23306865 | Msa0446720:intron | 40.0% |
| !!! | AGTGTCAAGGTTTTGCTGTT+GGG | - | chr3_3:23306847-23306866 | Msa0446720:intron | 40.0% |
| CTGTTGGGAAGAGTGATATT+AGG | - | chr3_3:23306862-23306881 | Msa0446720:intron | 40.0% | |
| GCAGTATGTATGTAACAAGC+AGG | - | chr3_3:23306914-23306933 | Msa0446720:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr3_3:23307025-23307044 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr3_3:23307025-23307044 | Msa0446720:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr3_3:23307026-23307045 | Msa0446720:intron | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | + | chr3_3:23307105-23307124 | None:intergenic | 40.0% | |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr3_3:23307161-23307180 | Msa0446720:CDS | 40.0% |
| GAATATTCTGCCACTGATGA+CGG | - | chr3_3:23307374-23307393 | Msa0446720:CDS | 40.0% | |
| !! | AAATGCCTATTTTGGGCAGA+TGG | - | chr3_3:23307404-23307423 | Msa0446720:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr3_3:23307490-23307509 | Msa0446720:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr3_3:23307502-23307521 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr3_3:23307503-23307522 | Msa0446720:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr3_3:23307644-23307663 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr3_3:23307641-23307660 | Msa0446720:CDS | 40.0% | |
| !! | AGATGGTGATGGTTCTATGA+GGG | - | chr3_3:23307658-23307677 | Msa0446720:intron | 40.0% |
| GCATCTGAACAAGAATGCTA+TGG | - | chr3_3:23307730-23307749 | Msa0446720:CDS | 40.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr3_3:23306258-23306277 | Msa0446720:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr3_3:23306272-23306291 | Msa0446720:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr3_3:23306312-23306331 | Msa0446720:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr3_3:23306474-23306493 | Msa0446720:intron | 45.0% |
| AGTGAAGGTGATGAACGTGA+AGG | - | chr3_3:23306579-23306598 | Msa0446720:intron | 45.0% | |
| GATGAACGTGAAGGTGATGA+AGG | - | chr3_3:23306588-23306607 | Msa0446720:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr3_3:23306603-23306622 | Msa0446720:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr3_3:23306630-23306649 | Msa0446720:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr3_3:23306630-23306649 | Msa0446720:intron | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr3_3:23306639-23306658 | Msa0446720:intron | 45.0% |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr3_3:23307088-23307107 | None:intergenic | 45.0% |
| ! | TGCACAACATTGGTTGGAGT+AGG | + | chr3_3:23307095-23307114 | None:intergenic | 45.0% |
| TTCTTAGTGAACCCAACACC+AGG | + | chr3_3:23307239-23307258 | None:intergenic | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | + | chr3_3:23307387-23307406 | None:intergenic | 45.0% | |
| TTGTGCCATCTGCCCAAAAT+AGG | + | chr3_3:23307412-23307431 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr3_3:23307509-23307528 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr3_3:23307553-23307572 | Msa0446720:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+TGG | - | chr3_3:23307647-23307666 | Msa0446720:CDS | 45.0% | |
| !! | CAGATGGTGATGGTTCTATG+AGG | - | chr3_3:23307657-23307676 | Msa0446720:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr3_3:23307670-23307689 | Msa0446720:intron | 45.0% | |
| AGTACGCGTCATTGTCTATG+TGG | - | chr3_3:23307704-23307723 | Msa0446720:CDS | 45.0% | |
| !!! | TTGAAGAGTTTTGGGGGACT+TGG | - | chr3_3:23307825-23307844 | Msa0446720:CDS | 45.0% |
| CAGATGAGTTGTCAGCACAT+GGG | + | chr3_3:23308051-23308070 | None:intergenic | 45.0% | |
| ACAGATGAGTTGTCAGCACA+TGG | + | chr3_3:23308052-23308071 | None:intergenic | 45.0% | |
| GCGAAGCTGCTGAATCTATA+CGG | - | chr3_3:23308084-23308103 | Msa0446720:CDS | 45.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr3_3:23306258-23306277 | Msa0446720:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr3_3:23306272-23306291 | Msa0446720:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr3_3:23306312-23306331 | Msa0446720:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr3_3:23306474-23306493 | Msa0446720:intron | 45.0% |
| AGTGAAGGTGATGAACGTGA+AGG | - | chr3_3:23306579-23306598 | Msa0446720:intron | 45.0% | |
| GATGAACGTGAAGGTGATGA+AGG | - | chr3_3:23306588-23306607 | Msa0446720:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr3_3:23306603-23306622 | Msa0446720:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr3_3:23306630-23306649 | Msa0446720:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr3_3:23306630-23306649 | Msa0446720:intron | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr3_3:23306639-23306658 | Msa0446720:intron | 45.0% |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr3_3:23307088-23307107 | None:intergenic | 45.0% |
| ! | TGCACAACATTGGTTGGAGT+AGG | + | chr3_3:23307095-23307114 | None:intergenic | 45.0% |
| TTCTTAGTGAACCCAACACC+AGG | + | chr3_3:23307239-23307258 | None:intergenic | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | + | chr3_3:23307387-23307406 | None:intergenic | 45.0% | |
| TTGTGCCATCTGCCCAAAAT+AGG | + | chr3_3:23307412-23307431 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr3_3:23307509-23307528 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr3_3:23307553-23307572 | Msa0446720:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+TGG | - | chr3_3:23307647-23307666 | Msa0446720:CDS | 45.0% | |
| !! | CAGATGGTGATGGTTCTATG+AGG | - | chr3_3:23307657-23307676 | Msa0446720:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr3_3:23307670-23307689 | Msa0446720:intron | 45.0% | |
| AGTACGCGTCATTGTCTATG+TGG | - | chr3_3:23307704-23307723 | Msa0446720:CDS | 45.0% | |
| !!! | TTGAAGAGTTTTGGGGGACT+TGG | - | chr3_3:23307825-23307844 | Msa0446720:CDS | 45.0% |
| CAGATGAGTTGTCAGCACAT+GGG | + | chr3_3:23308051-23308070 | None:intergenic | 45.0% | |
| ACAGATGAGTTGTCAGCACA+TGG | + | chr3_3:23308052-23308071 | None:intergenic | 45.0% | |
| GCGAAGCTGCTGAATCTATA+CGG | - | chr3_3:23308084-23308103 | Msa0446720:CDS | 45.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr3_3:23306318-23306337 | None:intergenic | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr3_3:23306606-23306625 | Msa0446720:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr3_3:23306624-23306643 | Msa0446720:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr3_3:23306997-23307016 | Msa0446720:intron | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr3_3:23307206-23307225 | Msa0446720:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr3_3:23307224-23307243 | Msa0446720:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr3_3:23307225-23307244 | Msa0446720:CDS | 50.0% | |
| !! | TGGTGATGGTTCTATGAGGG+AGG | - | chr3_3:23307661-23307680 | Msa0446720:intron | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr3_3:23307673-23307692 | Msa0446720:intron | 50.0% | |
| CGCGTCATTGTCTATGTGGT+TGG | - | chr3_3:23307708-23307727 | Msa0446720:CDS | 50.0% | |
| !!! | AGTTTTGGGGGACTTGGTGA+GGG | - | chr3_3:23307831-23307850 | Msa0446720:CDS | 50.0% |
| CAGCACATGGGATGAAAACC+TGG | + | chr3_3:23308039-23308058 | None:intergenic | 50.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr3_3:23306318-23306337 | None:intergenic | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr3_3:23306606-23306625 | Msa0446720:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr3_3:23306624-23306643 | Msa0446720:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr3_3:23306997-23307016 | Msa0446720:intron | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr3_3:23307206-23307225 | Msa0446720:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr3_3:23307224-23307243 | Msa0446720:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr3_3:23307225-23307244 | Msa0446720:CDS | 50.0% | |
| !! | TGGTGATGGTTCTATGAGGG+AGG | - | chr3_3:23307661-23307680 | Msa0446720:intron | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr3_3:23307673-23307692 | Msa0446720:intron | 50.0% | |
| CGCGTCATTGTCTATGTGGT+TGG | - | chr3_3:23307708-23307727 | Msa0446720:CDS | 50.0% | |
| !!! | AGTTTTGGGGGACTTGGTGA+GGG | - | chr3_3:23307831-23307850 | Msa0446720:CDS | 50.0% |
| CAGCACATGGGATGAAAACC+TGG | + | chr3_3:23308039-23308058 | None:intergenic | 50.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr3_3:23306315-23306334 | Msa0446720:CDS | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr3_3:23306609-23306628 | Msa0446720:intron | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr3_3:23307014-23307033 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr3_3:23307205-23307224 | Msa0446720:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr3_3:23307209-23307228 | Msa0446720:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr3_3:23307218-23307237 | Msa0446720:CDS | 55.0% | |
| !!! | GAGTTTTGGGGGACTTGGTG+AGG | - | chr3_3:23307830-23307849 | Msa0446720:CDS | 55.0% |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr3_3:23306315-23306334 | Msa0446720:CDS | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr3_3:23306609-23306628 | Msa0446720:intron | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr3_3:23307014-23307033 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr3_3:23307205-23307224 | Msa0446720:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr3_3:23307209-23307228 | Msa0446720:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr3_3:23307218-23307237 | Msa0446720:CDS | 55.0% | |
| !!! | GAGTTTTGGGGGACTTGGTG+AGG | - | chr3_3:23307830-23307849 | Msa0446720:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 23306225 | 23308127 | 23306225 | ID=Msa0446720;Name=Msa0446720 |
| chr3_3 | mRNA | 23306225 | 23308127 | 23306225 | ID=Msa0446720-mRNA-1;Parent=Msa0446720;Name=Msa0446720-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0|0.16|6|0|358 |
| chr3_3 | exon | 23307947 | 23308127 | 23307947 | ID=Msa0446720-mRNA-1:exon:4696;Parent=Msa0446720-mRNA-1 |
| chr3_3 | exon | 23307683 | 23307913 | 23307683 | ID=Msa0446720-mRNA-1:exon:4695;Parent=Msa0446720-mRNA-1 |
| chr3_3 | exon | 23307509 | 23307676 | 23307509 | ID=Msa0446720-mRNA-1:exon:4694;Parent=Msa0446720-mRNA-1 |
| chr3_3 | exon | 23307305 | 23307496 | 23307305 | ID=Msa0446720-mRNA-1:exon:4693;Parent=Msa0446720-mRNA-1 |
| chr3_3 | exon | 23307111 | 23307277 | 23307111 | ID=Msa0446720-mRNA-1:exon:4692;Parent=Msa0446720-mRNA-1 |
| chr3_3 | exon | 23306225 | 23306362 | 23306225 | ID=Msa0446720-mRNA-1:exon:4691;Parent=Msa0446720-mRNA-1 |
| chr3_3 | CDS | 23307947 | 23308127 | 23307947 | ID=Msa0446720-mRNA-1:cds;Parent=Msa0446720-mRNA-1 |
| chr3_3 | CDS | 23307683 | 23307913 | 23307683 | ID=Msa0446720-mRNA-1:cds;Parent=Msa0446720-mRNA-1 |
| chr3_3 | CDS | 23307509 | 23307676 | 23307509 | ID=Msa0446720-mRNA-1:cds;Parent=Msa0446720-mRNA-1 |
| chr3_3 | CDS | 23307305 | 23307496 | 23307305 | ID=Msa0446720-mRNA-1:cds;Parent=Msa0446720-mRNA-1 |
| chr3_3 | CDS | 23307111 | 23307277 | 23307111 | ID=Msa0446720-mRNA-1:cds;Parent=Msa0446720-mRNA-1 |
| chr3_3 | CDS | 23306225 | 23306362 | 23306225 | ID=Msa0446720-mRNA-1:cds;Parent=Msa0446720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
