AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0448210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0448210 MtrunA17_Chr3g0090311 99.454 183 1 0 1 183 1 183 7.94e-138 382
Msa0448210 MtrunA17_Chr7g0275421 34.400 125 81 1 27 151 12 135 1.23e-21 86.3
Msa0448210 MtrunA17_Chr7g0252251 31.373 153 96 4 23 169 65 214 3.86e-14 67.8
Msa0448210 MtrunA17_Chr3g0098461 37.241 145 71 5 41 183 37 163 4.59e-14 66.6
Msa0448210 MtrunA17_Chr3g0088851 43.000 100 48 2 2 101 6 96 2.39e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0448210 AT5G13780.1 87.640 178 21 1 1 178 1 177 1.57e-106 303
Msa0448210 AT1G03150.1 37.086 151 94 1 1 151 1 150 8.37e-31 110
Msa0448210 AT2G38130.2 34.921 126 79 3 23 148 38 160 1.95e-14 68.6
Msa0448210 AT2G38130.1 34.921 126 79 3 23 148 38 160 1.95e-14 68.6

Find 70 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGTGGATTTGAAGAATT+AGG 0.210822 3_3:+27723861 None:intergenic
AAGAATTAGGGTTAGGGTTT+TGG 0.227708 3_3:+27723874 None:intergenic
ATCTCTACCACATCCTTTCA+TGG 0.316257 3_3:-27723744 Msa0448210:CDS
TGGTTTGAGGATTTGGGTGG+GGG 0.322198 3_3:+27723894 None:intergenic
GGATTTGAAGAATTAGGGTT+AGG 0.370709 3_3:+27723867 None:intergenic
AACAAAGACACTTAAGAAAC+TGG 0.371891 3_3:+27718379 None:intergenic
CTCTGTCTGACACAGGTGTT+TGG 0.376562 3_3:-27718685 Msa0448210:intron
CATGGCGGTGGATGTTGTTC+TGG 0.380099 3_3:-27718469 Msa0448210:CDS
GTTGTGGATTTGAAGAATTA+GGG 0.382882 3_3:+27723862 None:intergenic
TTGGTTTGAGGATTTGGGTG+GGG 0.383982 3_3:+27723893 None:intergenic
GGTGAAGAGAGAATTTGTTT+TGG 0.396773 3_3:+27723925 None:intergenic
TTGAGGACTCATAGGAAGTT+GGG 0.396905 3_3:-27723607 Msa0448210:CDS
CTCACCATCGGCATAATACT+TGG 0.397635 3_3:+27718567 None:intergenic
TAAATGAATGCACCCGTTTG+TGG 0.398743 3_3:-27718205 Msa0448210:three_prime_UTR
CATGTCATGATGCTTGATTA+TGG 0.413261 3_3:-27718177 Msa0448210:three_prime_UTR
TTGTTAATTCAGAGAGAAAG+AGG 0.413840 3_3:-27718106 Msa0448210:three_prime_UTR
GATTACAACGGGCGTATTGT+TGG 0.428125 3_3:-27723697 Msa0448210:CDS
GGTAGAGATAATACTTCATC+TGG 0.430139 3_3:+27723758 None:intergenic
AATTTGTACACAGAGACATT+GGG 0.436747 3_3:-27718613 Msa0448210:CDS
AGTACGTGTCGCTGCACGTC+AGG 0.443312 3_3:-27718657 Msa0448210:CDS
ACGTAACAGAGAGCATTATT+CGG 0.452550 3_3:+27718298 None:intergenic
TTGCTGTGTTGAGGACTCAT+AGG 0.453926 3_3:-27723615 Msa0448210:CDS
ATTACAACGGGCGTATTGTT+GGG 0.454521 3_3:-27723696 Msa0448210:CDS
TACTTCATCTGGTAATTCTC+TGG 0.457563 3_3:+27723769 None:intergenic
ATGACATGATGAACCACAAA+CGG 0.461065 3_3:+27718192 None:intergenic
TTTGGTTTGAGGATTTGGGT+GGG 0.462483 3_3:+27723892 None:intergenic
GATTTGAAGAATTAGGGTTA+GGG 0.469618 3_3:+27723868 None:intergenic
TGCGCAGAATGCTATGGAAC+AGG 0.469671 3_3:-27723560 Msa0448210:intron
TTACTTCTCTTGCTGTGTTG+AGG 0.475222 3_3:-27723624 Msa0448210:CDS
AGGGGATTGCACACACAATC+AGG 0.476914 3_3:+27718423 None:intergenic
CTAGTTTGATATTGACAAGA+TGG 0.498485 3_3:-27718331 Msa0448210:three_prime_UTR
TGGGTATGTTCTTGCGAAGA+TGG 0.502832 3_3:-27723677 Msa0448210:CDS
GTTGAGGACTCATAGGAAGT+TGG 0.503107 3_3:-27723608 Msa0448210:CDS
TAATTTGTACACAGAGACAT+TGG 0.506484 3_3:-27718614 Msa0448210:CDS
CACCACCACCACCATGGCGG+TGG 0.513426 3_3:-27718481 Msa0448210:CDS
TGGTGATGATGATGCTGTGG+TGG 0.516982 3_3:+27718499 None:intergenic
TGACATGATGAACCACAAAC+GGG 0.524772 3_3:+27718193 None:intergenic
AACATCCACCGCCATGGTGG+TGG 0.527634 3_3:+27718476 None:intergenic
ACGTTGCTGAAGATTACAAC+GGG 0.530845 3_3:-27723708 Msa0448210:CDS
ATCCACCGCCATGGTGGTGG+TGG 0.531254 3_3:+27718479 None:intergenic
GGTGATGATGATGCTGTGGT+GGG 0.531337 3_3:+27718500 None:intergenic
GACTGCTGCGCAGAATGCTA+TGG 0.532516 3_3:-27723566 Msa0448210:CDS
AAAGAAGCTGCGGCCATGAA+AGG 0.545740 3_3:+27723731 None:intergenic
GCGTATGCACACCATTGTTG+TGG 0.579484 3_3:+27723846 None:intergenic
GTCGTAAGCATCCTCACCAT+CGG 0.583433 3_3:+27718555 None:intergenic
TCAGGCTTTAGCATTCCCCT+TGG 0.589203 3_3:+27718441 None:intergenic
TGGTGGTGATGATGATGCTG+TGG 0.594446 3_3:+27718496 None:intergenic
GACATGAGAAAGCAACTCAA+GGG 0.594794 3_3:-27718535 Msa0448210:CDS
GCTGCGGCCATGAAAGGATG+TGG 0.597525 3_3:+27723737 None:intergenic
CGACATGAGAAAGCAACTCA+AGG 0.607954 3_3:-27718536 Msa0448210:CDS
TGAGGACTCATAGGAAGTTG+GGG 0.612346 3_3:-27723606 Msa0448210:CDS
ATTTGTACACAGAGACATTG+GGG 0.621381 3_3:-27718612 Msa0448210:CDS
GGGGTACAAGATTCATGATG+TGG 0.625757 3_3:-27718593 Msa0448210:CDS
ATTCTTCAAATCCACAACAA+TGG 0.626938 3_3:-27723857 Msa0448210:exon
TGTTGTTCTGGTGAGACCAA+GGG 0.630820 3_3:-27718457 Msa0448210:CDS
GAAGAGACGAATGAGTGTCA+TGG 0.632268 3_3:-27723652 Msa0448210:CDS
ATGTTGTTCTGGTGAGACCA+AGG 0.634317 3_3:-27718458 Msa0448210:CDS
CAGAACAACATCCACCGCCA+TGG 0.635963 3_3:+27718470 None:intergenic
CAAGTATTATGCCGATGGTG+AGG 0.639380 3_3:-27718566 Msa0448210:CDS
GTACAAGATTCATGATGTGG+AGG 0.644670 3_3:-27718590 Msa0448210:CDS
GTTGTTCTGGTGAGACCAAG+GGG 0.645711 3_3:-27718456 Msa0448210:CDS
TGCACGCTTGCATCGCGAGT+AGG 0.650168 3_3:+27723806 None:intergenic
CATCATCACCACCACCACCA+TGG 0.659708 3_3:-27718487 Msa0448210:CDS
TACGTTGCTGAAGATTACAA+CGG 0.660668 3_3:-27723709 Msa0448210:CDS
ACATGAGAAAGCAACTCAAG+GGG 0.666287 3_3:-27718534 Msa0448210:CDS
TCAGCAACGTAAAGAAGCTG+CGG 0.667671 3_3:+27723721 None:intergenic
AACAACATCCACCGCCATGG+TGG 0.672650 3_3:+27718473 None:intergenic
GAGGCCAAGTATTATGCCGA+TGG 0.673456 3_3:-27718571 Msa0448210:CDS
TGTACAAATTAAAAGCTGCA+CGG 0.679752 3_3:+27718626 None:intergenic
CATCACCACCACCACCATGG+CGG 0.743898 3_3:-27718484 Msa0448210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTAAAAAAAT+TGG - chr3_3:27720532-27720551 Msa0448210:intron 0.0%
!!! TATTTTATTTTAAAAAAATT+GGG - chr3_3:27720533-27720552 Msa0448210:intron 0.0%
!! ATTTATTCAATGAATCTAAA+AGG + chr3_3:27719193-27719212 None:intergenic 15.0%
!! ACTTATAGCTTATAATAAAA+TGG + chr3_3:27719355-27719374 None:intergenic 15.0%
!! ATTAGCATTTATATGATAAA+CGG + chr3_3:27720465-27720484 None:intergenic 15.0%
!! TTAACTTAAACTTACTAAAT+AGG - chr3_3:27722630-27722649 Msa0448210:intron 15.0%
!! AGATTACACATTTCATAAAA+TGG + chr3_3:27718905-27718924 None:intergenic 20.0%
!! TTGCTTATAATAGTGATAAA+AGG - chr3_3:27719293-27719312 Msa0448210:intron 20.0%
!! TGCTTATAATAGTGATAAAA+GGG - chr3_3:27719294-27719313 Msa0448210:intron 20.0%
!!! GTTTTTAGCTTAATTTCATA+AGG + chr3_3:27719389-27719408 None:intergenic 20.0%
!! TATGAAATTAAGCTAAAAAC+TGG - chr3_3:27719389-27719408 Msa0448210:intron 20.0%
!! AAATAAGTTAAAACAACTCA+TGG - chr3_3:27719662-27719681 Msa0448210:intron 20.0%
!!! AATCATTTTTAGAGTTTGTT+GGG - chr3_3:27720091-27720110 Msa0448210:intron 20.0%
!!! ATTTTAAAAAAATTGGGAAG+CGG - chr3_3:27720539-27720558 Msa0448210:intron 20.0%
!! ATAAAAACAGTTTATACTTG+AGG + chr3_3:27720682-27720701 None:intergenic 20.0%
!!! ACTGTTTTTATAATAAACGA+TGG - chr3_3:27720691-27720710 Msa0448210:intron 20.0%
!! TTAAATAAGTCAATTGAATC+CGG - chr3_3:27721601-27721620 Msa0448210:intron 20.0%
!! CAAATTAGTTATTTACATCA+TGG - chr3_3:27721721-27721740 Msa0448210:intron 20.0%
!!! TTAGTTACAATTTTGTTAGT+TGG - chr3_3:27722555-27722574 Msa0448210:intron 20.0%
!! GAATACTCATAATCTTTATA+AGG - chr3_3:27722741-27722760 Msa0448210:intron 20.0%
!!! TTTTTCAACAAAATAATCGT+AGG + chr3_3:27722789-27722808 None:intergenic 20.0%
!!! TTTTGATTCTGTTATGAGTT+TGG - chr3_3:27718464-27718483 Msa0448210:CDS 25.0%
! TTGATTGAATTTGTAGTGTT+TGG - chr3_3:27718583-27718602 Msa0448210:CDS 25.0%
!!! TTTTTTCAATCGAGATTACA+AGG - chr3_3:27718676-27718695 Msa0448210:intron 25.0%
!!! TTTTTCAATCGAGATTACAA+GGG - chr3_3:27718677-27718696 Msa0448210:intron 25.0%
!! GTGATTTTCTGTTTATAAGT+GGG + chr3_3:27719232-27719251 None:intergenic 25.0%
!! AGTGATTTTCTGTTTATAAG+TGG + chr3_3:27719233-27719252 None:intergenic 25.0%
!!! TAAGCAAACAATCACTTTTT+AGG + chr3_3:27719280-27719299 None:intergenic 25.0%
! ATATAGTTATAGAGTCTGTA+CGG + chr3_3:27719763-27719782 None:intergenic 25.0%
! AATACAAAATCTCCCTTATT+TGG - chr3_3:27719986-27720005 Msa0448210:intron 25.0%
!! ATACAAAATCTCCCTTATTT+GGG - chr3_3:27719987-27720006 Msa0448210:intron 25.0%
! AACTCAAAAATTGTATTGGA+GGG - chr3_3:27720012-27720031 Msa0448210:intron 25.0%
!!! GAATCATTTTTAGAGTTTGT+TGG - chr3_3:27720090-27720109 Msa0448210:intron 25.0%
!!! AATCATTTTTAGAGTGAGTT+GGG - chr3_3:27720388-27720407 Msa0448210:intron 25.0%
!!! AGTTAGGATCATTTTTAAGT+TGG - chr3_3:27720906-27720925 Msa0448210:intron 25.0%
! CTGTTTCAAATAAACTATAC+TGG - chr3_3:27721033-27721052 Msa0448210:intron 25.0%
! TACTAACATAAACACATGTA+AGG + chr3_3:27721139-27721158 None:intergenic 25.0%
!!! TTAGAATCATTTTTGGAGTT+GGG - chr3_3:27721350-27721369 Msa0448210:intron 25.0%
! AAACTTAATTACGTGCTTAT+AGG - chr3_3:27721403-27721422 Msa0448210:intron 25.0%
!! TCCTGTTGTATTTAAGTTAA+TGG - chr3_3:27721643-27721662 Msa0448210:intron 25.0%
! ACCATTAACTTAAATACAAC+AGG + chr3_3:27721647-27721666 None:intergenic 25.0%
!!! TAACTTTGAGGATTCTTTTT+TGG + chr3_3:27721801-27721820 None:intergenic 25.0%
!!! TTTGAAAACAACTTGTTAAC+CGG - chr3_3:27721925-27721944 Msa0448210:intron 25.0%
!! TTTTTGTGTTTTCAAACTCT+GGG + chr3_3:27722176-27722195 None:intergenic 25.0%
!! ATTTTTGTGTTTTCAAACTC+TGG + chr3_3:27722177-27722196 None:intergenic 25.0%
! ATACCCCTATATACATATAT+AGG - chr3_3:27722317-27722336 Msa0448210:intron 25.0%
! TACCCCTATATACATATATA+GGG - chr3_3:27722318-27722337 Msa0448210:intron 25.0%
! AACCCTATATATGTATATAG+GGG + chr3_3:27722323-27722342 None:intergenic 25.0%
! CAACCCTATATATGTATATA+GGG + chr3_3:27722324-27722343 None:intergenic 25.0%
! ACAACCCTATATATGTATAT+AGG + chr3_3:27722325-27722344 None:intergenic 25.0%
!!! GTTAGGAATTTGTTATATCA+CGG - chr3_3:27722467-27722486 Msa0448210:intron 25.0%
!! CTTTTACAAGCTAAACTAAT+TGG + chr3_3:27722583-27722602 None:intergenic 25.0%
! CTTAAACTTACTAAATAGGT+TGG - chr3_3:27722634-27722653 Msa0448210:intron 25.0%
!!! TACTAAATAGGTTGGTTTAT+TGG - chr3_3:27722642-27722661 Msa0448210:intron 25.0%
! AAATAATCGTAGGAAAAGAA+AGG + chr3_3:27722779-27722798 None:intergenic 25.0%
!!! ATATCTTTGCTTTTATGTCA+TGG - chr3_3:27723848-27723867 Msa0448210:exon 25.0%
!!! TATCTTTGCTTTTATGTCAT+GGG - chr3_3:27723849-27723868 Msa0448210:exon 25.0%
GATTTGAAGAATTAGGGTTA+GGG + chr3_3:27718127-27718146 None:intergenic 30.0%
GTTGTGGATTTGAAGAATTA+GGG + chr3_3:27718133-27718152 None:intergenic 30.0%
TGTTGTGGATTTGAAGAATT+AGG + chr3_3:27718134-27718153 None:intergenic 30.0%
ATTCTTCAAATCCACAACAA+TGG - chr3_3:27718135-27718154 Msa0448210:three_prime_UTR 30.0%
TTACTTAGTTATCTCGAGTT+CGG - chr3_3:27718492-27718511 Msa0448210:CDS 30.0%
!! AAAGTGTCTTGCCTTTTTAT+CGG - chr3_3:27718837-27718856 Msa0448210:intron 30.0%
!! GAATCATTTTTACTGTGAGT+TGG - chr3_3:27719057-27719076 Msa0448210:intron 30.0%
TGCTTATAAAAGTGACTGAA+GGG + chr3_3:27719162-27719181 None:intergenic 30.0%
TTGCTTATAAAAGTGACTGA+AGG + chr3_3:27719163-27719182 None:intergenic 30.0%
TCAATTAAGTCAATCCAAAC+AGG - chr3_3:27719441-27719460 Msa0448210:intron 30.0%
!!! TTGTTTTTATAAGCTGTCCT+TGG - chr3_3:27719629-27719648 Msa0448210:intron 30.0%
!! TGTTTTTATAAGCTGTCCTT+GGG - chr3_3:27719630-27719649 Msa0448210:intron 30.0%
! CTACTAAGATAAGCACTTTT+GGG + chr3_3:27719720-27719739 None:intergenic 30.0%
! TCTACTAAGATAAGCACTTT+TGG + chr3_3:27719721-27719740 None:intergenic 30.0%
GAACTAACTACTAACAAACT+TGG + chr3_3:27719849-27719868 None:intergenic 30.0%
TGGAGTAAGTGAAAGAATTT+AGG - chr3_3:27719921-27719940 Msa0448210:intron 30.0%
GGAGTAAGTGAAAGAATTTA+GGG - chr3_3:27719922-27719941 Msa0448210:intron 30.0%
! TACAAAATCTCCCTTATTTG+GGG - chr3_3:27719988-27720007 Msa0448210:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG - chr3_3:27720011-27720030 Msa0448210:intron 30.0%
ACTCAAAAATTGTATTGGAG+GGG - chr3_3:27720013-27720032 Msa0448210:intron 30.0%
TTTATTACTATGACCCTGTT+TGG - chr3_3:27720116-27720135 Msa0448210:intron 30.0%
TTATTACTATGACCCTGTTT+GGG - chr3_3:27720117-27720136 Msa0448210:intron 30.0%
GACTGCTTATGCTATTAAAA+AGG - chr3_3:27720154-27720173 Msa0448210:intron 30.0%
!! GCTTATTTTCATAAACACTC+CGG + chr3_3:27720243-27720262 None:intergenic 30.0%
AATAAGCCGAAAACAACTTA+TGG - chr3_3:27720256-27720275 Msa0448210:intron 30.0%
!! ACATGTCCATAAGTTGTTTT+CGG + chr3_3:27720265-27720284 None:intergenic 30.0%
GTCAATTTGTACGAACTTAT+AGG - chr3_3:27720353-27720372 Msa0448210:intron 30.0%
!!! GAATCATTTTTAGAGTGAGT+TGG - chr3_3:27720387-27720406 Msa0448210:intron 30.0%
TGTTAATTAAAGTGCACTAG+TGG - chr3_3:27720569-27720588 Msa0448210:intron 30.0%
GCATCAAGTGATAAATTAGT+GGG + chr3_3:27720804-27720823 None:intergenic 30.0%
AAAGTTGTAACTAAATACCC+TGG + chr3_3:27720874-27720893 None:intergenic 30.0%
! CTTTAGTGTTTGAGATAGTT+AGG - chr3_3:27720890-27720909 Msa0448210:intron 30.0%
ATCTGTAACAGCTATTTACA+AGG + chr3_3:27721192-27721211 None:intergenic 30.0%
! GTCAACGTTATAAGTTTGTT+TGG - chr3_3:27721261-27721280 Msa0448210:intron 30.0%
! GAGACACTTAGAATCATTTT+TGG - chr3_3:27721343-27721362 Msa0448210:intron 30.0%
!!! CTTAGAATCATTTTTGGAGT+TGG - chr3_3:27721349-27721368 Msa0448210:intron 30.0%
!! CAGTTTGACTTGTTTACTAT+AGG + chr3_3:27721464-27721483 None:intergenic 30.0%
AAGCTTTCTTAGATAGCTTA+TGG - chr3_3:27721500-27721519 Msa0448210:intron 30.0%
GATAAGCTGAAAACAACTTA+TGG - chr3_3:27721524-27721543 Msa0448210:intron 30.0%
TTGTAACAGATAATTAGTGC+CGG + chr3_3:27721623-27721642 None:intergenic 30.0%
AGCAACGATAATGATTTCAA+CGG + chr3_3:27721775-27721794 None:intergenic 30.0%
AAAGAATCCTCAAAGTTAGT+TGG - chr3_3:27721803-27721822 Msa0448210:intron 30.0%
AAGAATCCTCAAAGTTAGTT+GGG - chr3_3:27721804-27721823 Msa0448210:intron 30.0%
!! ACAAGTTGTTTTCAAACTCT+GGG + chr3_3:27721921-27721940 None:intergenic 30.0%
!! AACAAGTTGTTTTCAAACTC+TGG + chr3_3:27721922-27721941 None:intergenic 30.0%
!! TTGAAAACAACTTGTTAACC+GGG - chr3_3:27721926-27721945 Msa0448210:intron 30.0%
! GTTTTCTTACCTCGTAAATA+TGG + chr3_3:27721965-27721984 None:intergenic 30.0%
GTTGAACTTGAATAAGAGAA+TGG - chr3_3:27722075-27722094 Msa0448210:intron 30.0%
TCTGCAATTGTATATCTTCT+GGG - chr3_3:27722385-27722404 Msa0448210:intron 30.0%
!! GGTTGGTTTATTGGTATTTA+TGG - chr3_3:27722651-27722670 Msa0448210:intron 30.0%
TATAAACAGTTGAGCTGAAA+TGG - chr3_3:27722694-27722713 Msa0448210:intron 30.0%
TTCAATTAGCTGTGATACTT+AGG - chr3_3:27722825-27722844 Msa0448210:intron 30.0%
AGAGCAGATAAGTTGTAAAA+AGG + chr3_3:27722866-27722885 None:intergenic 30.0%
!! CAGAGTTGATTTTCACTTAT+GGG - chr3_3:27722959-27722978 Msa0448210:intron 30.0%
AAGTGTTTGCTTTCTTGTAA+TGG - chr3_3:27723251-27723270 Msa0448210:intron 30.0%
AGTGTTTGCTTTCTTGTAAT+GGG - chr3_3:27723252-27723271 Msa0448210:intron 30.0%
TGTACAAATTAAAAGCTGCA+CGG + chr3_3:27723369-27723388 None:intergenic 30.0%
! TAATTTGTACACAGAGACAT+TGG - chr3_3:27723378-27723397 Msa0448210:intron 30.0%
AATTTGTACACAGAGACATT+GGG - chr3_3:27723379-27723398 Msa0448210:intron 30.0%
AGAAACTGGCAAAAAAAATG+TGG + chr3_3:27723602-27723621 None:intergenic 30.0%
AACAAAGACACTTAAGAAAC+TGG + chr3_3:27723616-27723635 None:intergenic 30.0%
CTAGTTTGATATTGACAAGA+TGG - chr3_3:27723661-27723680 Msa0448210:CDS 30.0%
!! ATCTTTGCTTTTATGTCATG+GGG - chr3_3:27723850-27723869 Msa0448210:exon 30.0%
TTGTTAATTCAGAGAGAAAG+AGG - chr3_3:27723886-27723905 Msa0448210:five_prime_UTR 30.0%
!! GGTGAAGAGAGAATTTGTTT+TGG + chr3_3:27718070-27718089 None:intergenic 35.0%
! AAGAATTAGGGTTAGGGTTT+TGG + chr3_3:27718121-27718140 None:intergenic 35.0%
GGATTTGAAGAATTAGGGTT+AGG + chr3_3:27718128-27718147 None:intergenic 35.0%
TACTTCATCTGGTAATTCTC+TGG + chr3_3:27718226-27718245 None:intergenic 35.0%
GGTAGAGATAATACTTCATC+TGG + chr3_3:27718237-27718256 None:intergenic 35.0%
TACGTTGCTGAAGATTACAA+CGG - chr3_3:27718283-27718302 Msa0448210:three_prime_UTR 35.0%
CGAGATTACAAGGGTAAAAT+TGG - chr3_3:27718686-27718705 Msa0448210:intron 35.0%
ATAAGCCCATGAGAAATTGA+CGG - chr3_3:27718761-27718780 Msa0448210:intron 35.0%
AGAAATTGACGGTTACCAAA+CGG - chr3_3:27718772-27718791 Msa0448210:intron 35.0%
TTGACTAGAAAAGATCCGTT+TGG + chr3_3:27718790-27718809 None:intergenic 35.0%
TGTCTATCAGTCCGATAAAA+AGG + chr3_3:27718851-27718870 None:intergenic 35.0%
CTTAATTTCATAAGGTCTGC+AGG + chr3_3:27719381-27719400 None:intergenic 35.0%
ACAGATAGTTACAACCTGTT+TGG + chr3_3:27719458-27719477 None:intergenic 35.0%
CAGGTTGTAACTATCTGTTA+CGG - chr3_3:27719460-27719479 Msa0448210:intron 35.0%
TAGTTCTTCAGAGCATGTTT+AGG - chr3_3:27719863-27719882 Msa0448210:intron 35.0%
! AGTGAAAGAATTTAGGGCTT+TGG - chr3_3:27719928-27719947 Msa0448210:intron 35.0%
! GTGAAAGAATTTAGGGCTTT+GGG - chr3_3:27719929-27719948 Msa0448210:intron 35.0%
! ACAAAATCTCCCTTATTTGG+GGG - chr3_3:27719989-27720008 Msa0448210:intron 35.0%
!!! TTTTGAGTTCCCCCAAATAA+GGG + chr3_3:27720001-27720020 None:intergenic 35.0%
!!! TTTTTGAGTTCCCCCAAATA+AGG + chr3_3:27720002-27720021 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG - chr3_3:27720008-27720027 Msa0448210:intron 35.0%
CTCAAAAATTGTATTGGAGG+GGG - chr3_3:27720014-27720033 Msa0448210:intron 35.0%
ATTGTTTCAGTAAGCCATAC+CGG - chr3_3:27720221-27720240 Msa0448210:intron 35.0%
! TTTTCATAAACACTCCGGTA+TGG + chr3_3:27720238-27720257 None:intergenic 35.0%
TCCAAACAATGCGTTATAGT+CGG + chr3_3:27720419-27720438 None:intergenic 35.0%
CTTATTACCTTGATGCTACA+AGG - chr3_3:27720624-27720643 Msa0448210:intron 35.0%
! AGATTAGTTGGACCTATTAG+TGG - chr3_3:27720771-27720790 Msa0448210:intron 35.0%
GGCATCAAGTGATAAATTAG+TGG + chr3_3:27720805-27720824 None:intergenic 35.0%
!! ATGCCTATTTTTCTCATGAG+TGG - chr3_3:27720820-27720839 Msa0448210:intron 35.0%
TGTCCACTCATGAGAAAAAT+AGG + chr3_3:27720826-27720845 None:intergenic 35.0%
ATGAGTGGACAGTAGATAAA+TGG - chr3_3:27720835-27720854 Msa0448210:intron 35.0%
GCATAAGCACTTAATTAAGC+TGG + chr3_3:27720966-27720985 None:intergenic 35.0%
! AACGTTGACAAACTTGTTCA+TGG + chr3_3:27721250-27721269 None:intergenic 35.0%
CTTGTGATATAGACGATGTT+TGG - chr3_3:27721375-27721394 Msa0448210:intron 35.0%
ATAAGCACGTTTATGACTAG+GGG + chr3_3:27721429-27721448 None:intergenic 35.0%
CATAAGCACGTTTATGACTA+GGG + chr3_3:27721430-27721449 None:intergenic 35.0%
ACATAAGCACGTTTATGACT+AGG + chr3_3:27721431-27721450 None:intergenic 35.0%
AGACTATTTGAGAGAGCTTA+TGG + chr3_3:27721568-27721587 None:intergenic 35.0%
CGTAAATATGGAGAAACAGT+TGG + chr3_3:27721953-27721972 None:intergenic 35.0%
! ACTGTTTCTCCATATTTACG+AGG - chr3_3:27721953-27721972 Msa0448210:intron 35.0%
! TCTGGTGTTAAAAGTGTATG+TGG + chr3_3:27721998-27722017 None:intergenic 35.0%
GAAAAACAACCGGATTATCT+TGG - chr3_3:27722051-27722070 Msa0448210:intron 35.0%
AGTTCAACACCAAGATAATC+CGG + chr3_3:27722063-27722082 None:intergenic 35.0%
!!! GGAATGCATTTTTAGGTTGT+TGG + chr3_3:27722242-27722261 None:intergenic 35.0%
CTCTGCAATTGTATATCTTC+TGG - chr3_3:27722384-27722403 Msa0448210:intron 35.0%
! TAAAGTACCAGAGTCTTATG+AGG - chr3_3:27722419-27722438 Msa0448210:intron 35.0%
GATTCTGTTGAAAGTCTGTT+AGG - chr3_3:27722450-27722469 Msa0448210:intron 35.0%
CTTATCTGCTCTTAATCTCA+TGG - chr3_3:27722874-27722893 Msa0448210:intron 35.0%
ATGAAAACTTGTGGCGATTA+TGG - chr3_3:27722898-27722917 Msa0448210:intron 35.0%
!! GCAGAGTTGATTTTCACTTA+TGG - chr3_3:27722958-27722977 Msa0448210:intron 35.0%
! TGATTTTCACTTATGGGAGA+AGG - chr3_3:27722965-27722984 Msa0448210:intron 35.0%
AATCGAATTGTGGTATACTG+AGG + chr3_3:27723080-27723099 None:intergenic 35.0%
AGTCTAACTGAATCGAATTG+TGG + chr3_3:27723090-27723109 None:intergenic 35.0%
ACAGATAGAATTGCTGAACT+AGG + chr3_3:27723203-27723222 None:intergenic 35.0%
GTGTTTGCTTTCTTGTAATG+GGG - chr3_3:27723253-27723272 Msa0448210:intron 35.0%
ATTTGTACACAGAGACATTG+GGG - chr3_3:27723380-27723399 Msa0448210:intron 35.0%
ACTGGCAAAAAAAATGTGGT+GGG + chr3_3:27723598-27723617 None:intergenic 35.0%
AACTGGCAAAAAAAATGTGG+TGG + chr3_3:27723599-27723618 None:intergenic 35.0%
!! ACGTAACAGAGAGCATTATT+CGG + chr3_3:27723697-27723716 None:intergenic 35.0%
ATGACATGATGAACCACAAA+CGG + chr3_3:27723803-27723822 None:intergenic 35.0%
CATGTCATGATGCTTGATTA+TGG - chr3_3:27723815-27723834 Msa0448210:CDS 35.0%
!! TTTGGTTTGAGGATTTGGGT+GGG + chr3_3:27718103-27718122 None:intergenic 40.0%
!!! TTTTGGTTTGAGGATTTGGG+TGG + chr3_3:27718104-27718123 None:intergenic 40.0%
!!! GGGTTTTGGTTTGAGGATTT+GGG + chr3_3:27718107-27718126 None:intergenic 40.0%
!!! AGGGTTTTGGTTTGAGGATT+TGG + chr3_3:27718108-27718127 None:intergenic 40.0%
ATCTCTACCACATCCTTTCA+TGG - chr3_3:27718248-27718267 Msa0448210:three_prime_UTR 40.0%
ACGTTGCTGAAGATTACAAC+GGG - chr3_3:27718284-27718303 Msa0448210:three_prime_UTR 40.0%
ATTACAACGGGCGTATTGTT+GGG - chr3_3:27718296-27718315 Msa0448210:three_prime_UTR 40.0%
! TTACTTCTCTTGCTGTGTTG+AGG - chr3_3:27718368-27718387 Msa0448210:three_prime_UTR 40.0%
TTGAGGACTCATAGGAAGTT+GGG - chr3_3:27718385-27718404 Msa0448210:three_prime_UTR 40.0%
AGAATGCTATGGAACAGGTT+TGG - chr3_3:27718437-27718456 Msa0448210:exon 40.0%
GGTAACCGTCAATTTCTCAT+GGG + chr3_3:27718769-27718788 None:intergenic 40.0%
TGGTAACCGTCAATTTCTCA+TGG + chr3_3:27718770-27718789 None:intergenic 40.0%
TTTATCGGACTGATAGACAC+AGG - chr3_3:27718852-27718871 Msa0448210:intron 40.0%
TGCTCAGAATGCTATGGAAA+AGG - chr3_3:27718959-27718978 Msa0448210:intron 40.0%
! TGAGTTGGAGTTTGTGACTA+AGG - chr3_3:27719072-27719091 Msa0448210:intron 40.0%
TTTGTGACTAAGGCTCTGTT+TGG - chr3_3:27719082-27719101 Msa0448210:intron 40.0%
CTTATTTCCATAAGCTCCCA+AGG + chr3_3:27719649-27719668 None:intergenic 40.0%
TTGGAAAGCAACCTATTCCA+TGG + chr3_3:27719830-27719849 None:intergenic 40.0%
TCAGAGCATGTTTAGGAGTT+TGG - chr3_3:27719870-27719889 Msa0448210:intron 40.0%
GCATGTTTAGGAGTTTGGAA+TGG - chr3_3:27719875-27719894 Msa0448210:intron 40.0%
! TGTTTAGGAGTTTGGAATGG+AGG - chr3_3:27719878-27719897 Msa0448210:intron 40.0%
! GTTTAGGAGTTTGGAATGGA+GGG - chr3_3:27719879-27719898 Msa0448210:intron 40.0%
!!! GAGGGTTTTGGAGAAAAGTA+TGG - chr3_3:27719901-27719920 Msa0448210:intron 40.0%
!! AAAGAATTTAGGGCTTTGGG+TGG - chr3_3:27719932-27719951 Msa0448210:intron 40.0%
! ATTGTATTGGAGGGGGATTT+TGG - chr3_3:27720021-27720040 Msa0448210:intron 40.0%
CTAAGCTGATTACCCAAACA+GGG + chr3_3:27720132-27720151 None:intergenic 40.0%
ACTAAGCTGATTACCCAAAC+AGG + chr3_3:27720133-27720152 None:intergenic 40.0%
TCCGACTATAACGCATTGTT+TGG - chr3_3:27720415-27720434 Msa0448210:intron 40.0%
CACTAGTGGCCAATTTAGAA+TGG - chr3_3:27720583-27720602 Msa0448210:intron 40.0%
AGCTTAACCTTGTAGCATCA+AGG + chr3_3:27720634-27720653 None:intergenic 40.0%
CTGTAAATGGAGGTAGATTC+TGG + chr3_3:27720727-27720746 None:intergenic 40.0%
CTTTCTCTCTGGACTGTAAA+TGG + chr3_3:27720740-27720759 None:intergenic 40.0%
GACACATGTGGAAGATTAGT+TGG - chr3_3:27720759-27720778 Msa0448210:intron 40.0%
GTAACTAAATACCCTGGATC+TGG + chr3_3:27720868-27720887 None:intergenic 40.0%
TTAGTGACTATGACCCTGTT+TGG - chr3_3:27720936-27720955 Msa0448210:intron 40.0%
TAGTGACTATGACCCTGTTT+GGG - chr3_3:27720937-27720956 Msa0448210:intron 40.0%
TTAAGCTGGTTACCCAAACA+GGG + chr3_3:27720952-27720971 None:intergenic 40.0%
ATTAAGCTGGTTACCCAAAC+AGG + chr3_3:27720953-27720972 None:intergenic 40.0%
CTTTATGCTGAAGCTCATGA+CGG - chr3_3:27721212-27721231 Msa0448210:intron 40.0%
! CTTGTTCATGGCATTTTGAG+CGG + chr3_3:27721238-27721257 None:intergenic 40.0%
! AACCTGTTCCATAGCGTTTT+GGG + chr3_3:27721675-27721694 None:intergenic 40.0%
! AAACCTGTTCCATAGCGTTT+TGG + chr3_3:27721676-27721695 None:intergenic 40.0%
CAAGTTCCCAACTAACTTTG+AGG + chr3_3:27721813-27721832 None:intergenic 40.0%
TTGCGACTGTAACTCTGTTA+CGG - chr3_3:27721830-27721849 Msa0448210:intron 40.0%
AAAGTGTATGTGGAGGAACA+GGG + chr3_3:27721988-27722007 None:intergenic 40.0%
! AAAAGTGTATGTGGAGGAAC+AGG + chr3_3:27721989-27722008 None:intergenic 40.0%
! GGTGTTAAAAGTGTATGTGG+AGG + chr3_3:27721995-27722014 None:intergenic 40.0%
! GTCGAACTGGTTTACAAGTT+GGG + chr3_3:27722021-27722040 None:intergenic 40.0%
CAGGATACGTGAAAAACAAC+CGG - chr3_3:27722041-27722060 Msa0448210:intron 40.0%
AGAGAATGGCATACTGAATG+AGG - chr3_3:27722089-27722108 Msa0448210:intron 40.0%
!! TCAAACTCTGGGATCTCTTT+AGG + chr3_3:27722165-27722184 None:intergenic 40.0%
! TCACAGGGGAATGCATTTTT+AGG + chr3_3:27722249-27722268 None:intergenic 40.0%
TGCATTCCCCTGTGATATAT+TGG - chr3_3:27722254-27722273 Msa0448210:intron 40.0%
! GATATATTGGCACGGTCTTT+TGG - chr3_3:27722267-27722286 Msa0448210:intron 40.0%
CCAATAACCTCATAAGACTC+TGG + chr3_3:27722429-27722448 None:intergenic 40.0%
! CCAGAGTCTTATGAGGTTAT+TGG - chr3_3:27722426-27722445 Msa0448210:intron 40.0%
TGTGATACTTAGGATGCGTT+TGG - chr3_3:27722835-27722854 Msa0448210:intron 40.0%
TCTCATGGCATGAAAACTTG+TGG - chr3_3:27722889-27722908 Msa0448210:intron 40.0%
GTACAAGATTCATGATGTGG+AGG - chr3_3:27723402-27723421 Msa0448210:intron 40.0%
GACATGAGAAAGCAACTCAA+GGG - chr3_3:27723457-27723476 Msa0448210:intron 40.0%
ACATGAGAAAGCAACTCAAG+GGG - chr3_3:27723458-27723477 Msa0448210:intron 40.0%
! AAAAAAATGTGGTGGGGGTA+GGG + chr3_3:27723591-27723610 None:intergenic 40.0%
! AAAAAAAATGTGGTGGGGGT+AGG + chr3_3:27723592-27723611 None:intergenic 40.0%
TGGCAAAAAAAATGTGGTGG+GGG + chr3_3:27723596-27723615 None:intergenic 40.0%
CTGGCAAAAAAAATGTGGTG+GGG + chr3_3:27723597-27723616 None:intergenic 40.0%
TAAATGAATGCACCCGTTTG+TGG - chr3_3:27723787-27723806 Msa0448210:CDS 40.0%
TGACATGATGAACCACAAAC+GGG + chr3_3:27723802-27723821 None:intergenic 40.0%
! TTGGTTTGAGGATTTGGGTG+GGG + chr3_3:27718102-27718121 None:intergenic 45.0%
!!! AGGGTTAGGGTTTTGGTTTG+AGG + chr3_3:27718114-27718133 None:intergenic 45.0%
TCAGCAACGTAAAGAAGCTG+CGG + chr3_3:27718274-27718293 None:intergenic 45.0%
GATTACAACGGGCGTATTGT+TGG - chr3_3:27718295-27718314 Msa0448210:three_prime_UTR 45.0%
TGGGTATGTTCTTGCGAAGA+TGG - chr3_3:27718315-27718334 Msa0448210:three_prime_UTR 45.0%
GAAGAGACGAATGAGTGTCA+TGG - chr3_3:27718340-27718359 Msa0448210:three_prime_UTR 45.0%
TTGCTGTGTTGAGGACTCAT+AGG - chr3_3:27718377-27718396 Msa0448210:three_prime_UTR 45.0%
GTTGAGGACTCATAGGAAGT+TGG - chr3_3:27718384-27718403 Msa0448210:three_prime_UTR 45.0%
TGAGGACTCATAGGAAGTTG+GGG - chr3_3:27718386-27718405 Msa0448210:three_prime_UTR 45.0%
AGACACAGGTGGAAGATTGT+AGG - chr3_3:27718866-27718885 Msa0448210:intron 45.0%
TTCTGAGCAGCAGTCATAAG+TGG + chr3_3:27718948-27718967 None:intergenic 45.0%
GGACTGTTTGAGAGAGCTTA+TGG + chr3_3:27719699-27719718 None:intergenic 45.0%
TTCCATGGCGATTTGAGCAT+CGG + chr3_3:27719815-27719834 None:intergenic 45.0%
TGCTCAAATCGCCATGGAAT+AGG - chr3_3:27719816-27719835 Msa0448210:intron 45.0%
!! ATTTAGGGCTTTGGGTGGTA+AGG - chr3_3:27719937-27719956 Msa0448210:intron 45.0%
!! TTTAGGGCTTTGGGTGGTAA+GGG - chr3_3:27719938-27719957 Msa0448210:intron 45.0%
! TGGCCAATTTAGAATGGCAC+TGG - chr3_3:27720589-27720608 Msa0448210:intron 45.0%
! CCTCCAGTGCCATTCTAAAT+TGG + chr3_3:27720595-27720614 None:intergenic 45.0%
! CCAATTTAGAATGGCACTGG+AGG - chr3_3:27720592-27720611 Msa0448210:intron 45.0%
TCTCTCTGGACTGTAAATGG+AGG + chr3_3:27720737-27720756 None:intergenic 45.0%
TCCAGAGAGAAAGACACATG+TGG - chr3_3:27720747-27720766 Msa0448210:intron 45.0%
TCCACATGTGTCTTTCTCTC+TGG + chr3_3:27720751-27720770 None:intergenic 45.0%
GTGGGACTCATTCCACTAAT+AGG + chr3_3:27720786-27720805 None:intergenic 45.0%
AATGGAGCAATTCCAGATCC+AGG - chr3_3:27720853-27720872 Msa0448210:intron 45.0%
ATGGAGCAATTCCAGATCCA+GGG - chr3_3:27720854-27720873 Msa0448210:intron 45.0%
!! AGGCTGTTTGAGAGAGCATT+TGG + chr3_3:27721119-27721138 None:intergenic 45.0%
TATGGAGAAACAGTTGGACC+CGG + chr3_3:27721947-27721966 None:intergenic 45.0%
AAGTGTATGTGGAGGAACAG+GGG + chr3_3:27721987-27722006 None:intergenic 45.0%
! ACTGGTTTACAAGTTGGGTC+TGG + chr3_3:27722016-27722035 None:intergenic 45.0%
! GGTCGAACTGGTTTACAAGT+TGG + chr3_3:27722022-27722041 None:intergenic 45.0%
ACTTGTAAACCAGTTCGACC+AGG - chr3_3:27722022-27722041 Msa0448210:intron 45.0%
!!! CGGTTGTTTTTCACGTATCC+TGG + chr3_3:27722043-27722062 None:intergenic 45.0%
TGGCATACTGAATGAGGCAA+AGG - chr3_3:27722095-27722114 Msa0448210:intron 45.0%
! TTACGAGGGTGTGAAATGCA+TGG + chr3_3:27722123-27722142 None:intergenic 45.0%
CTTCCAAGGTGGTATTACGA+GGG + chr3_3:27722137-27722156 None:intergenic 45.0%
TTTAGGTGTAGCTTCCAAGG+TGG + chr3_3:27722148-27722167 None:intergenic 45.0%
CTCTTTAGGTGTAGCTTCCA+AGG + chr3_3:27722151-27722170 None:intergenic 45.0%
TCCCCTGTGATATATTGGCA+CGG - chr3_3:27722259-27722278 Msa0448210:intron 45.0%
ACCGTGCCAATATATCACAG+GGG + chr3_3:27722263-27722282 None:intergenic 45.0%
GACCGTGCCAATATATCACA+GGG + chr3_3:27722264-27722283 None:intergenic 45.0%
AGACCGTGCCAATATATCAC+AGG + chr3_3:27722265-27722284 None:intergenic 45.0%
ACTGAGGCAACCAATTACAG+AGG + chr3_3:27723064-27723083 None:intergenic 45.0%
GAGAGAGAGAGAGAGAGAAT+CGG + chr3_3:27723126-27723145 None:intergenic 45.0%
! TGCTTTCTTGTAATGGGGCT+TGG - chr3_3:27723258-27723277 Msa0448210:intron 45.0%
ACTGTTACTCTGTCTGACAC+AGG - chr3_3:27723300-27723319 Msa0448210:intron 45.0%
GGGGTACAAGATTCATGATG+TGG - chr3_3:27723399-27723418 Msa0448210:intron 45.0%
CTCACCATCGGCATAATACT+TGG + chr3_3:27723428-27723447 None:intergenic 45.0%
CAAGTATTATGCCGATGGTG+AGG - chr3_3:27723426-27723445 Msa0448210:intron 45.0%
CGACATGAGAAAGCAACTCA+AGG - chr3_3:27723456-27723475 Msa0448210:intron 45.0%
ATGTTGTTCTGGTGAGACCA+AGG - chr3_3:27723534-27723553 Msa0448210:intron 45.0%
TGTTGTTCTGGTGAGACCAA+GGG - chr3_3:27723535-27723554 Msa0448210:intron 45.0%
! AAAAAATGTGGTGGGGGTAG+GGG + chr3_3:27723590-27723609 None:intergenic 45.0%
ATTTGGGTGGGGGAATCGAA+TGG + chr3_3:27718091-27718110 None:intergenic 50.0%
TGGTTTGAGGATTTGGGTGG+GGG + chr3_3:27718101-27718120 None:intergenic 50.0%
GCGTATGCACACCATTGTTG+TGG + chr3_3:27718149-27718168 None:intergenic 50.0%
AAAGAAGCTGCGGCCATGAA+AGG + chr3_3:27718264-27718283 None:intergenic 50.0%
TGCGCAGAATGCTATGGAAC+AGG - chr3_3:27718432-27718451 Msa0448210:exon 50.0%
TCGAGTTCGGATTTGCATCG+CGG - chr3_3:27718505-27718524 Msa0448210:CDS 50.0%
ATCGGACTGATAGACACAGG+TGG - chr3_3:27718855-27718874 Msa0448210:intron 50.0%
GACTGCTGCTCAGAATGCTA+TGG - chr3_3:27718953-27718972 Msa0448210:intron 50.0%
AAGCTGTCCTTGGGAGCTTA+TGG - chr3_3:27719639-27719658 Msa0448210:intron 50.0%
!! GGCGATTTGAGCATCGGAAT+GGG + chr3_3:27719809-27719828 None:intergenic 50.0%
!! TGGCGATTTGAGCATCGGAA+TGG + chr3_3:27719810-27719829 None:intergenic 50.0%
TTCCGATGCTCAAATCGCCA+TGG - chr3_3:27719810-27719829 Msa0448210:intron 50.0%
! TAGGAGTTTGGAATGGAGGG+AGG - chr3_3:27719882-27719901 Msa0448210:intron 50.0%
! AGGAGTTTGGAATGGAGGGA+GGG - chr3_3:27719883-27719902 Msa0448210:intron 50.0%
! TTGGAATGGAGGGAGGGTTT+TGG - chr3_3:27719889-27719908 Msa0448210:intron 50.0%
!! CTGTTCCATAGCGTTTTGGG+TGG + chr3_3:27721672-27721691 None:intergenic 50.0%
CACCCAAAACGCTATGGAAC+AGG - chr3_3:27721670-27721689 Msa0448210:intron 50.0%
TTCACGTATCCTGGTCGAAC+TGG + chr3_3:27722034-27722053 None:intergenic 50.0%
ACACCCTCGTAATACCACCT+TGG - chr3_3:27722131-27722150 Msa0448210:intron 50.0%
GCTTCCAAGGTGGTATTACG+AGG + chr3_3:27722138-27722157 None:intergenic 50.0%
CTCTGTCTGACACAGGTGTT+TGG - chr3_3:27723307-27723326 Msa0448210:intron 50.0%
GAGGCCAAGTATTATGCCGA+TGG - chr3_3:27723421-27723440 Msa0448210:intron 50.0%
GTCGTAAGCATCCTCACCAT+CGG + chr3_3:27723440-27723459 None:intergenic 50.0%
! GGTGATGATGATGCTGTGGT+GGG + chr3_3:27723495-27723514 None:intergenic 50.0%
! TGGTGATGATGATGCTGTGG+TGG + chr3_3:27723496-27723515 None:intergenic 50.0%
! TGGTGGTGATGATGATGCTG+TGG + chr3_3:27723499-27723518 None:intergenic 50.0%
GTTGTTCTGGTGAGACCAAG+GGG - chr3_3:27723536-27723555 Msa0448210:intron 50.0%
! TCAGGCTTTAGCATTCCCCT+TGG + chr3_3:27723554-27723573 None:intergenic 50.0%
AGGGGATTGCACACACAATC+AGG + chr3_3:27723572-27723591 None:intergenic 50.0%
GACTGCTGCGCAGAATGCTA+TGG - chr3_3:27718426-27718445 Msa0448210:exon 55.0%
CTTTGGGTGGTAAGGGCTCT+GGG - chr3_3:27719945-27719964 Msa0448210:intron 55.0%
TTTGGGTGGTAAGGGCTCTG+GGG - chr3_3:27719946-27719965 Msa0448210:intron 55.0%
CATCATCACCACCACCACCA+TGG - chr3_3:27723505-27723524 Msa0448210:intron 55.0%
AACAACATCCACCGCCATGG+TGG + chr3_3:27723522-27723541 None:intergenic 55.0%
CAGAACAACATCCACCGCCA+TGG + chr3_3:27723525-27723544 None:intergenic 55.0%
CATGGCGGTGGATGTTGTTC+TGG - chr3_3:27723523-27723542 Msa0448210:intron 55.0%
TGCACGCTTGCATCGCGAGT+AGG + chr3_3:27718189-27718208 None:intergenic 60.0%
GCTGCGGCCATGAAAGGATG+TGG + chr3_3:27718258-27718277 None:intergenic 60.0%
! GCTTTGGGTGGTAAGGGCTC+TGG - chr3_3:27719944-27719963 Msa0448210:intron 60.0%
GGTCGCCACCCAAAACGCTA+TGG - chr3_3:27721664-27721683 Msa0448210:intron 60.0%
! AGTACGTGTCGCTGCACGTC+AGG - chr3_3:27723335-27723354 Msa0448210:intron 60.0%
CATCACCACCACCACCATGG+CGG - chr3_3:27723508-27723527 Msa0448210:intron 60.0%
AACATCCACCGCCATGGTGG+TGG + chr3_3:27723519-27723538 None:intergenic 60.0%
!! ATCCACCGCCATGGTGGTGG+TGG + chr3_3:27723516-27723535 None:intergenic 65.0%
CACCACCACCACCATGGCGG+TGG - chr3_3:27723511-27723530 Msa0448210:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 27718058 27723956 27718058 ID=Msa0448210;Name=Msa0448210
chr3_3 mRNA 27718058 27723956 27718058 ID=Msa0448210-mRNA-1;Parent=Msa0448210;Name=Msa0448210-mRNA-1;_AED=0.01;_eAED=0.01;_QI=96|1|1|1|1|1|2|383|183
chr3_3 exon 27718058 27718692 27718058 ID=Msa0448210-mRNA-1:exon:5403;Parent=Msa0448210-mRNA-1
chr3_3 exon 27723561 27723956 27723561 ID=Msa0448210-mRNA-1:exon:5402;Parent=Msa0448210-mRNA-1
chr3_3 five_prime_UTR 27723861 27723956 27723861 ID=Msa0448210-mRNA-1:five_prime_utr;Parent=Msa0448210-mRNA-1
chr3_3 CDS 27723561 27723860 27723561 ID=Msa0448210-mRNA-1:cds;Parent=Msa0448210-mRNA-1
chr3_3 CDS 27718441 27718692 27718441 ID=Msa0448210-mRNA-1:cds;Parent=Msa0448210-mRNA-1
chr3_3 three_prime_UTR 27718058 27718440 27718058 ID=Msa0448210-mRNA-1:three_prime_utr;Parent=Msa0448210-mRNA-1
Gene Sequence

>Msa0448210

ATGGTGTGCATACGCAAAGCAAACGTAAACGACCTACTCGCGATGCAAGCGTGCAATCTCTTCTGCTTACCAGAGAATTACCAGATGAAGTATTATCTCTACCACATCCTTTCATGGCCGCAGCTTCTTTACGTTGCTGAAGATTACAACGGGCGTATTGTTGGGTATGTTCTTGCGAAGATGGAAGAAGAGACGAATGAGTGTCATGGTCATATTACTTCTCTTGCTGTGTTGAGGACTCATAGGAAGTTGGGGATTGCTACTAAGCTTATGACTGCTGCGCAGAATGCTATGGAACAGGTGTTTGGTGCTGAGTACGTGTCGCTGCACGTCAGGAAGAGCAACCGTGCAGCTTTTAATTTGTACACAGAGACATTGGGGTACAAGATTCATGATGTGGAGGCCAAGTATTATGCCGATGGTGAGGATGCTTACGACATGAGAAAGCAACTCAAGGGGAAGACGATACACCCACCACAGCATCATCATCACCACCACCACCATGGCGGTGGATGTTGTTCTGGTGAGACCAAGGGGAATGCTAAAGCCTGA
Protein sequence

>Msa0448210

MVCIRKANVNDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETNECHGHITSLAVLRTHRKLGIATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKTIHPPQHHHHHHHHGGGCCSGETKGNAKA*