AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0450240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450240 MtrunA17_Chr3g0117511 97.978 445 8 1 1 444 3 447 0.0 910
Msa0450240 MtrunA17_Chr4g0058991 54.691 437 170 13 4 425 28 451 8.38e-148 429
Msa0450240 MtrunA17_Chr5g0421201 57.635 203 50 7 232 429 12 183 3.79e-67 213
Msa0450240 MtrunA17_Chr7g0228531 70.079 127 37 1 174 300 214 339 5.15e-56 192
Msa0450240 MtrunA17_Chr5g0429661 61.379 145 48 2 165 302 108 251 6.15e-56 189
Msa0450240 MtrunA17_Chr7g0228481 65.354 127 43 1 174 300 214 339 5.94e-50 176
Msa0450240 MtrunA17_Chr7g0228401 45.902 183 74 2 170 327 245 427 6.68e-43 158
Msa0450240 MtrunA17_Chr7g0233061 56.522 138 56 3 170 305 170 305 7.76e-42 152
Msa0450240 MtrunA17_Chr7g0238631 63.462 104 38 0 178 281 111 214 1.89e-40 152
Msa0450240 MtrunA17_Chr1g0177901 55.396 139 52 3 190 327 4 133 2.02e-40 144
Msa0450240 MtrunA17_Chr1g0157731 57.692 104 44 0 178 281 89 192 2.23e-38 149
Msa0450240 MtrunA17_Chr3g0139671 59.223 103 42 0 178 280 83 185 6.46e-38 147
Msa0450240 MtrunA17_Chr5g0397841 57.143 98 42 0 177 274 107 204 9.12e-35 135
Msa0450240 MtrunA17_Chr5g0401731 50.909 110 54 0 173 282 8 117 5.43e-34 130
Msa0450240 MtrunA17_Chr4g0053431 53.271 107 50 0 176 282 1 107 8.05e-34 128
Msa0450240 MtrunA17_Chr3g0133601 50.943 106 52 0 175 280 32 137 7.67e-33 124
Msa0450240 MtrunA17_Chr4g0008551 53.922 102 47 0 179 280 37 138 8.32e-33 127
Msa0450240 MtrunA17_Chr6g0454921 47.273 110 58 0 173 282 8 117 2.34e-31 119
Msa0450240 MtrunA17_Chr5g0437321 53.061 98 46 0 179 276 18 115 6.40e-30 118
Msa0450240 MtrunA17_Chr7g0233151 71.831 71 20 0 230 300 1 71 2.56e-28 110
Msa0450240 MtrunA17_Chr4g0055981 41.912 136 74 3 165 297 44 177 1.64e-27 110
Msa0450240 MtrunA17_Chr5g0435101 47.059 119 58 3 167 283 2 117 4.05e-27 108
Msa0450240 MtrunA17_Chr3g0099131 46.552 116 57 3 177 290 40 152 5.71e-27 114
Msa0450240 MtrunA17_Chr6g0460661 47.525 101 53 0 180 280 16 116 6.95e-27 106
Msa0450240 MtrunA17_Chr5g0417621 40.136 147 84 2 163 309 117 259 1.32e-26 111
Msa0450240 MtrunA17_Chr6g0480581 44.800 125 67 1 180 304 4 126 1.37e-26 107
Msa0450240 MtrunA17_Chr4g0042501 43.548 124 68 1 180 303 105 226 1.81e-26 111
Msa0450240 MtrunA17_Chr2g0281071 48.039 102 52 1 180 280 15 116 2.77e-26 109
Msa0450240 MtrunA17_Chr2g0323351 33.945 218 114 8 180 377 14 221 3.42e-26 106
Msa0450240 MtrunA17_Chr2g0323411 46.667 105 55 1 180 283 14 118 7.20e-26 107
Msa0450240 MtrunA17_Chr8g0354661 37.415 147 82 3 152 297 18 155 7.88e-26 110
Msa0450240 MtrunA17_Chr8g0346561 47.059 102 53 1 175 275 9 110 8.26e-26 107
Msa0450240 MtrunA17_Chr4g0037141 49.533 107 51 2 180 284 14 119 1.07e-25 106
Msa0450240 MtrunA17_Chr3g0103281 44.545 110 60 1 174 282 8 117 1.26e-25 107
Msa0450240 MtrunA17_Chr5g0395281 47.115 104 52 2 180 281 14 116 1.27e-25 106
Msa0450240 MtrunA17_Chr3g0104491 60.759 79 26 1 230 303 17 95 1.38e-25 105
Msa0450240 MtrunA17_Chr3g0080861 42.188 128 69 3 172 297 31 155 1.61e-25 109
Msa0450240 MtrunA17_Chr5g0410961 43.636 110 61 1 175 283 9 118 2.32e-25 106
Msa0450240 MtrunA17_Chr3g0117091 42.609 115 61 3 172 284 8 119 2.42e-25 106
Msa0450240 MtrunA17_Chr8g0343831 47.170 106 55 1 180 284 10 115 2.92e-25 104
Msa0450240 MtrunA17_Chr1g0211161 43.925 107 57 2 180 284 15 120 3.06e-25 103
Msa0450240 MtrunA17_Chr4g0048511 47.059 102 53 1 180 280 15 116 3.26e-25 106
Msa0450240 MtrunA17_Chr4g0022901 41.026 117 65 3 166 280 2 116 3.34e-25 104
Msa0450240 MtrunA17_Chr7g0254261 43.651 126 71 0 180 305 89 214 3.81e-25 106
Msa0450240 MtrunA17_Chr3g0131121 48.598 107 51 3 180 283 14 119 4.70e-25 104
Msa0450240 MtrunA17_Chr5g0441131 42.373 118 64 3 176 291 7 122 4.97e-25 101
Msa0450240 MtrunA17_Chr6g0452271 42.727 110 62 1 175 283 9 118 5.38e-25 105
Msa0450240 MtrunA17_Chr4g0058631 38.806 134 78 3 172 304 8 138 5.84e-25 105
Msa0450240 MtrunA17_Chr1g0209661 43.137 102 57 1 180 280 29 130 6.50e-25 104
Msa0450240 MtrunA17_Chr4g0044421 44.167 120 63 3 167 284 2 119 6.92e-25 101
Msa0450240 MtrunA17_Chr4g0070611 29.876 241 138 7 167 391 3 228 6.96e-25 104
Msa0450240 MtrunA17_Chr4g0068061 44.444 108 59 1 174 280 8 115 7.18e-25 105
Msa0450240 MtrunA17_Chr4g0057031 43.243 111 60 2 175 283 9 118 7.63e-25 103
Msa0450240 MtrunA17_Chr4g0039971 47.115 104 52 2 180 281 15 117 8.60e-25 105
Msa0450240 MtrunA17_Chr5g0434571 44.144 111 59 2 175 283 45 154 9.43e-25 105
Msa0450240 MtrunA17_Chr8g0385321 43.802 121 62 4 166 283 2 119 9.52e-25 104
Msa0450240 MtrunA17_Chr3g0125801 47.368 114 57 1 180 290 16 129 9.94e-25 103
Msa0450240 MtrunA17_Chr7g0275911 46.078 102 54 1 175 275 9 110 1.25e-24 102
Msa0450240 MtrunA17_Chr3g0104501 39.264 163 72 5 90 231 28 184 1.28e-24 100
Msa0450240 MtrunA17_Chr1g0167691 44.660 103 56 1 180 281 14 116 1.44e-24 102
Msa0450240 MtrunA17_Chr3g0088461 43.443 122 61 2 167 280 4 125 1.52e-24 104
Msa0450240 MtrunA17_Chr1g0167661 32.663 199 119 4 180 375 14 200 1.67e-24 102
Msa0450240 MtrunA17_Chr1g0193371 44.660 103 54 2 180 280 14 115 1.84e-24 104
Msa0450240 MtrunA17_Chr3g0110351 43.243 111 60 2 175 283 9 118 2.16e-24 103
Msa0450240 MtrunA17_Chr4g0022911 41.748 103 57 2 180 280 15 116 2.59e-24 102
Msa0450240 MtrunA17_Chr2g0328771 45.098 102 55 1 180 280 22 123 2.91e-24 102
Msa0450240 MtrunA17_Chr4g0070641 44.348 115 53 3 166 275 2 110 3.61e-24 99.0
Msa0450240 MtrunA17_Chr4g0032401 42.857 119 63 2 167 280 2 120 3.75e-24 102
Msa0450240 MtrunA17_Chr4g0022931 40.171 117 66 3 166 280 2 116 3.81e-24 101
Msa0450240 MtrunA17_Chr2g0309911 43.636 110 57 3 173 280 8 114 4.15e-24 102
Msa0450240 MtrunA17_Chr5g0440781 44.737 114 59 3 180 291 14 125 4.21e-24 99.4
Msa0450240 MtrunA17_Chr7g0261281 44.660 103 56 1 174 275 8 110 4.40e-24 101
Msa0450240 MtrunA17_Chr5g0441141 44.737 114 59 3 180 291 14 125 4.72e-24 101
Msa0450240 MtrunA17_Chr7g0274581 40.541 111 65 1 174 283 8 118 4.84e-24 99.8
Msa0450240 MtrunA17_Chr7g0271241 48.454 97 47 2 180 274 14 109 5.08e-24 103
Msa0450240 MtrunA17_Chr5g0440761 44.737 114 59 3 180 291 14 125 5.63e-24 100
Msa0450240 MtrunA17_Chr1g0168661 44.248 113 55 3 180 290 23 129 5.83e-24 100
Msa0450240 MtrunA17_Chr1g0193801 41.667 108 61 2 180 286 14 120 9.15e-24 102
Msa0450240 MtrunA17_Chr1g0154031 43.363 113 58 2 180 291 78 185 1.16e-23 102
Msa0450240 MtrunA17_Chr2g0322521 46.774 124 61 3 170 291 21 141 1.20e-23 102
Msa0450240 MtrunA17_Chr1g0186061 46.939 98 49 2 178 273 20 116 1.30e-23 99.8
Msa0450240 MtrunA17_Chr5g0417821 42.727 110 62 1 172 280 1 110 1.32e-23 100
Msa0450240 MtrunA17_Chr7g0217741 42.342 111 63 1 174 283 8 118 1.47e-23 100
Msa0450240 MtrunA17_Chr7g0270891 42.593 108 60 2 180 286 14 120 1.67e-23 101
Msa0450240 MtrunA17_Chr6g0460671 47.059 102 54 0 179 280 98 199 1.79e-23 101
Msa0450240 MtrunA17_Chr3g0115821 46.602 103 52 2 180 280 14 115 1.97e-23 101
Msa0450240 MtrunA17_Chr8g0349261 47.170 106 48 4 175 275 10 112 2.40e-23 99.8
Msa0450240 MtrunA17_Chr7g0228891 41.284 109 61 2 175 281 9 116 2.99e-23 99.0
Msa0450240 MtrunA17_Chr5g0397231 45.361 97 52 1 180 275 14 110 3.03e-23 100
Msa0450240 MtrunA17_Chr1g0187761 39.831 118 68 2 174 289 8 124 3.89e-23 98.6
Msa0450240 MtrunA17_Chr8g0342541 42.718 103 56 2 180 280 14 115 4.72e-23 100
Msa0450240 MtrunA17_Chr8g0387421 40.952 105 61 1 180 283 14 118 5.11e-23 99.4
Msa0450240 MtrunA17_Chr1g0203411 41.593 113 64 2 180 291 14 125 6.87e-23 98.6
Msa0450240 MtrunA17_Chr8g0334881 46.078 102 53 2 180 279 12 113 8.63e-23 98.6
Msa0450240 MtrunA17_Chr7g0228231 45.263 95 51 1 180 273 16 110 9.10e-23 95.9
Msa0450240 MtrunA17_Chr5g0434931 42.056 107 59 2 180 284 37 142 1.37e-22 97.4
Msa0450240 MtrunA17_Chr4g0046181 68.254 63 20 0 174 236 215 277 1.39e-22 97.8
Msa0450240 MtrunA17_Chr8g0342521 43.689 103 55 2 180 280 14 115 1.39e-22 98.6
Msa0450240 MtrunA17_Chr2g0330041 42.718 103 56 2 180 280 14 115 1.82e-22 99.0
Msa0450240 MtrunA17_Chr4g0042671 40.541 111 65 1 174 283 8 118 4.05e-22 98.2
Msa0450240 MtrunA17_Chr1g0180391 37.778 135 78 3 158 290 2 132 4.24e-22 94.7
Msa0450240 MtrunA17_Chr4g0022891 42.373 118 60 3 180 295 14 125 4.55e-22 95.1
Msa0450240 MtrunA17_Chr3g0121241 39.216 102 61 1 175 275 39 140 5.23e-22 96.3
Msa0450240 MtrunA17_Chr7g0220341 40.800 125 68 3 176 295 23 146 5.82e-22 95.5
Msa0450240 MtrunA17_Chr8g0342481 41.441 111 59 4 173 280 9 116 6.00e-22 97.8
Msa0450240 MtrunA17_Chr6g0453471 41.818 110 63 1 175 283 9 118 7.93e-22 96.7
Msa0450240 MtrunA17_Chr4g0013361 44.118 102 55 2 180 279 12 113 9.37e-22 95.5
Msa0450240 MtrunA17_Chr5g0434911 42.056 107 59 2 180 284 23 128 1.01e-21 94.7
Msa0450240 MtrunA17_Chr4g0030881 40.870 115 58 2 180 285 9 122 1.03e-21 94.4
Msa0450240 MtrunA17_Chr6g0470971 39.831 118 69 2 169 285 6 122 1.25e-21 94.7
Msa0450240 MtrunA17_Chr6g0450101 40.741 108 63 1 167 273 3 110 1.54e-21 92.8
Msa0450240 MtrunA17_Chr1g0194951 37.333 150 85 3 175 323 9 150 2.17e-21 95.5
Msa0450240 MtrunA17_Chr7g0254411 41.441 111 64 1 174 283 8 118 2.18e-21 95.1
Msa0450240 MtrunA17_Chr1g0152011 37.594 133 74 3 175 298 9 141 2.74e-21 94.7
Msa0450240 MtrunA17_Chr3g0135311 42.982 114 62 3 175 285 9 122 2.90e-21 94.7
Msa0450240 MtrunA17_Chr7g0240821 47.368 95 47 2 183 275 6 99 3.12e-21 92.4
Msa0450240 MtrunA17_Chr3g0092401 41.441 111 64 1 174 283 9 119 4.28e-21 93.6
Msa0450240 MtrunA17_Chr7g0217221 41.905 105 60 1 180 283 14 118 4.90e-21 92.8
Msa0450240 MtrunA17_Chr5g0434841 42.056 107 59 2 180 284 22 127 5.61e-21 93.6
Msa0450240 MtrunA17_Chr4g0060721 39.640 111 66 1 174 283 9 119 5.76e-21 93.6
Msa0450240 MtrunA17_Chr7g0228991 39.623 106 63 1 180 284 31 136 8.92e-21 92.0
Msa0450240 MtrunA17_Chr1g0151941 37.931 116 68 3 167 280 3 116 1.04e-20 91.3
Msa0450240 MtrunA17_Chr5g0416341 42.982 114 62 2 170 281 17 129 1.06e-20 94.4
Msa0450240 MtrunA17_Chr2g0327821 41.667 108 60 2 180 285 8 114 1.31e-20 90.5
Msa0450240 MtrunA17_Chr4g0054391 44.118 102 55 2 175 274 9 110 1.42e-20 92.0
Msa0450240 MtrunA17_Chr6g0453211 44.330 97 53 1 180 275 14 110 1.55e-20 92.0
Msa0450240 MtrunA17_Chr2g0327351 43.689 103 56 2 175 275 9 111 2.73e-20 91.7
Msa0450240 MtrunA17_Chr5g0400821 41.667 108 61 2 175 280 9 116 2.99e-20 91.3
Msa0450240 MtrunA17_Chr5g0434831 41.121 107 60 2 180 284 9 114 3.06e-20 88.6
Msa0450240 MtrunA17_Chr1g0203441 40.000 105 62 1 180 283 15 119 4.18e-20 90.1
Msa0450240 MtrunA17_Chr1g0192411 40.566 106 62 1 176 280 10 115 4.23e-20 92.0
Msa0450240 MtrunA17_Chr7g0233161 72.414 58 16 0 174 231 293 350 4.43e-20 91.7
Msa0450240 MtrunA17_Chr7g0269831 39.216 153 90 2 174 323 8 160 6.22e-20 90.9
Msa0450240 MtrunA17_Chr1g0194291 40.187 107 63 1 180 285 23 129 6.97e-20 89.4
Msa0450240 MtrunA17_Chr1g0194301 39.815 108 62 2 180 285 35 141 7.11e-20 89.4
Msa0450240 MtrunA17_Chr8g0360111 41.237 97 56 1 180 275 27 123 1.96e-19 87.8
Msa0450240 MtrunA17_Chr2g0293911 37.838 111 67 2 175 284 21 130 2.14e-19 89.0
Msa0450240 MtrunA17_Chr8g0362231 38.776 98 60 0 183 280 25 122 2.20e-19 90.5
Msa0450240 MtrunA17_Chr4g0072751 43.689 103 56 2 175 275 9 111 3.21e-19 89.0
Msa0450240 MtrunA17_Chr4g0022881 39.175 97 58 1 180 275 14 110 3.30e-19 86.7
Msa0450240 MtrunA17_Chr4g0068921 42.000 100 55 2 176 273 22 120 4.04e-19 85.5
Msa0450240 MtrunA17_Chr6g0487491 37.600 125 66 4 167 281 3 125 8.94e-19 85.9
Msa0450240 MtrunA17_Chr4g0028311 39.815 108 63 2 175 280 9 116 1.04e-18 87.0
Msa0450240 MtrunA17_Chr3g0099141 44.578 83 45 1 177 258 39 121 1.17e-18 82.4
Msa0450240 MtrunA17_Chr7g0247131 36.719 128 59 2 213 340 14 119 1.47e-18 85.5
Msa0450240 MtrunA17_Chr2g0311221 42.268 97 55 1 180 275 16 112 1.64e-18 86.7
Msa0450240 MtrunA17_Chr7g0264641 38.889 108 64 2 175 280 9 116 4.16e-18 84.3
Msa0450240 MtrunA17_Chr7g0238651 40.000 110 63 2 180 286 7 116 1.08e-16 81.3
Msa0450240 MtrunA17_Chr5g0434901 45.455 66 36 0 213 278 9 74 3.03e-16 74.7
Msa0450240 MtrunA17_Chr5g0425591 41.176 85 48 2 176 258 7 91 8.32e-15 70.1
Msa0450240 MtrunA17_Chr7g0229101 45.455 66 36 0 213 278 8 73 1.34e-14 72.8
Msa0450240 MtrunA17_Chr3g0093811 39.437 71 43 0 213 283 18 88 3.69e-14 72.4
Msa0450240 MtrunA17_Chr4g0042611 40.244 82 46 2 174 253 8 88 3.73e-14 67.8
Msa0450240 MtrunA17_Chr2g0323321 40.000 80 45 2 180 257 13 91 5.16e-14 68.2
Msa0450240 MtrunA17_Chr2g0294811 37.805 82 48 2 174 253 8 88 1.79e-13 67.0
Msa0450240 MtrunA17_Chr5g0395221 41.250 80 46 1 175 253 9 88 3.31e-13 65.1
Msa0450240 MtrunA17_Chr7g0229131 41.791 67 39 0 213 279 8 74 6.63e-13 67.0
Msa0450240 MtrunA17_Chr6g0483051 40.426 94 55 1 180 273 120 212 2.20e-12 69.3
Msa0450240 MtrunA17_Chr8g0342461 40.000 85 45 4 173 254 9 90 7.47e-12 63.2
Msa0450240 MtrunA17_Chr4g0046171 68.182 44 14 0 261 304 1 44 1.41e-11 62.4
Msa0450240 MtrunA17_Chr8g0342471 40.000 85 45 4 173 254 9 90 2.04e-11 61.6
Msa0450240 MtrunA17_Chr8g0342531 35.443 79 48 2 180 256 14 91 3.15e-11 62.0
Msa0450240 MtrunA17_Chr8g0342511 36.585 82 47 3 173 252 9 87 8.06e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450240 AT4G18770.1 48.949 333 145 6 72 392 107 426 1.66e-95 295
Msa0450240 AT3G27785.1 64.000 150 50 2 164 309 173 322 1.50e-59 202
Msa0450240 AT5G58850.1 62.329 146 42 2 171 303 96 241 1.33e-54 188
Msa0450240 AT5G11050.1 73.684 114 29 1 177 289 102 215 3.34e-52 182
Msa0450240 AT5G40360.1 58.696 138 55 1 173 308 151 288 1.61e-49 173
Msa0450240 AT3G09370.2 59.167 120 47 1 177 294 132 251 1.15e-40 152
Msa0450240 AT3G09370.1 59.167 120 47 1 177 294 127 246 1.32e-40 152
Msa0450240 AT3G09370.3 59.167 120 47 1 177 294 140 259 1.74e-40 152
Msa0450240 AT5G02320.1 61.165 103 40 0 178 280 125 227 8.44e-39 148
Msa0450240 AT5G02320.2 61.165 103 40 0 178 280 125 227 8.44e-39 148
Msa0450240 AT5G02320.3 61.165 103 40 0 178 280 65 167 9.73e-39 147
Msa0450240 AT2G25230.1 48.872 133 68 0 174 306 20 152 7.09e-38 138
Msa0450240 AT5G11510.3 53.279 122 51 1 178 299 79 194 1.68e-37 147
Msa0450240 AT5G11510.1 53.279 122 51 1 178 299 79 194 1.68e-37 147
Msa0450240 AT5G11510.4 53.279 122 51 1 178 299 79 194 1.68e-37 147
Msa0450240 AT5G11510.2 53.279 122 51 1 178 299 79 194 2.10e-37 146
Msa0450240 AT5G11510.5 53.279 122 51 1 178 299 79 194 2.13e-37 146
Msa0450240 AT4G32730.5 55.000 120 49 1 178 297 85 199 4.87e-37 145
Msa0450240 AT4G32730.4 55.000 120 49 1 178 297 85 199 4.87e-37 145
Msa0450240 AT4G32730.3 55.000 120 49 1 178 297 85 199 4.87e-37 145
Msa0450240 AT4G32730.2 55.000 120 49 1 178 297 85 199 4.87e-37 145
Msa0450240 AT4G32730.1 55.000 120 49 1 178 297 85 199 5.79e-37 145
Msa0450240 AT3G55730.1 45.833 144 76 1 179 320 55 198 1.10e-35 137
Msa0450240 AT5G40430.1 47.761 134 67 3 174 306 48 179 1.76e-34 130
Msa0450240 AT4G37260.1 51.351 111 54 0 172 282 5 115 5.23e-33 127
Msa0450240 AT4G00540.2 59.615 104 39 1 180 280 103 206 5.75e-33 129
Msa0450240 AT2G23290.1 51.351 111 54 0 172 282 5 115 1.32e-32 126
Msa0450240 AT4G00540.1 59.615 104 39 1 180 280 101 204 1.74e-32 129
Msa0450240 AT3G09230.1 53.398 103 48 0 179 281 54 156 9.18e-31 123
Msa0450240 AT3G50060.1 48.077 104 54 0 179 282 5 108 2.60e-29 117
Msa0450240 AT5G67300.1 50.000 102 51 0 179 280 5 106 3.05e-29 117
Msa0450240 AT3G29020.1 50.000 106 50 1 180 282 65 170 6.57e-28 111
Msa0450240 AT5G26660.1 36.527 167 100 4 180 344 14 176 1.65e-27 113
Msa0450240 AT3G29020.2 50.000 106 50 1 180 282 67 172 1.98e-27 112
Msa0450240 AT2G39880.1 47.170 106 56 0 179 284 49 154 2.13e-27 113
Msa0450240 AT3G11440.2 45.000 120 61 3 174 291 37 153 2.78e-27 114
Msa0450240 AT3G11440.3 41.912 136 70 4 174 307 37 165 6.02e-27 114
Msa0450240 AT3G11440.4 41.912 136 70 4 174 307 37 165 6.02e-27 114
Msa0450240 AT3G11440.1 41.912 136 70 4 174 307 37 165 6.02e-27 114
Msa0450240 AT5G14750.1 40.000 120 71 1 178 296 16 135 6.70e-27 107
Msa0450240 AT3G28470.1 37.013 154 95 2 175 327 9 161 9.75e-27 110
Msa0450240 AT1G22640.1 48.673 113 55 2 174 284 8 119 1.13e-26 108
Msa0450240 AT2G26960.1 35.484 186 95 4 175 359 17 178 1.43e-26 112
Msa0450240 AT1G69560.2 45.690 116 61 1 175 290 118 231 1.64e-26 110
Msa0450240 AT4G28110.1 47.619 105 54 1 180 283 14 118 1.67e-26 108
Msa0450240 AT1G69560.1 45.690 116 61 1 175 290 102 215 1.74e-26 109
Msa0450240 AT1G74430.1 46.226 106 56 1 180 284 14 119 2.08e-26 108
Msa0450240 AT5G55020.1 44.248 113 60 2 180 291 28 138 2.85e-26 112
Msa0450240 AT2G32460.2 47.826 115 53 4 180 291 8 118 2.93e-26 111
Msa0450240 AT2G32460.1 47.826 115 53 4 180 291 20 130 2.97e-26 111
Msa0450240 AT4G26930.1 44.248 113 60 2 180 291 21 131 3.14e-26 110
Msa0450240 AT4G05100.1 46.018 113 60 1 172 283 7 119 3.21e-26 108
Msa0450240 AT4G38620.1 50.467 107 50 2 180 284 14 119 3.94e-26 107
Msa0450240 AT1G26780.1 46.154 117 61 1 180 296 98 212 4.26e-26 107
Msa0450240 AT1G26780.2 46.154 117 61 1 180 296 98 212 5.70e-26 108
Msa0450240 AT5G06100.1 40.876 137 70 4 180 308 34 167 7.32e-26 110
Msa0450240 AT2G26950.1 43.200 125 60 3 172 291 10 128 8.77e-26 108
Msa0450240 AT4G21440.1 49.020 102 51 1 180 280 14 115 1.23e-25 107
Msa0450240 AT5G12870.1 43.651 126 59 3 167 283 2 124 1.28e-25 106
Msa0450240 AT1G57560.1 44.860 107 56 2 180 284 14 119 1.59e-25 107
Msa0450240 AT4G22680.1 45.045 111 58 2 175 283 9 118 1.75e-25 105
Msa0450240 AT1G57560.2 44.860 107 56 2 180 284 14 119 1.92e-25 105
Msa0450240 AT5G06100.5 40.876 137 70 4 180 308 34 167 2.00e-25 109
Msa0450240 AT5G06100.2 40.876 137 70 4 180 308 34 167 2.00e-25 109
Msa0450240 AT5G06100.3 40.876 137 70 4 180 308 34 167 2.00e-25 109
Msa0450240 AT5G06100.4 40.876 137 70 4 180 308 34 167 2.00e-25 109
Msa0450240 AT1G09540.1 44.860 107 56 2 180 284 14 119 2.37e-25 107
Msa0450240 AT4G33450.1 43.651 126 69 1 174 299 13 136 2.65e-25 104
Msa0450240 AT5G07690.1 48.649 111 54 2 166 275 2 110 2.84e-25 106
Msa0450240 AT5G40330.1 37.681 138 75 3 174 310 8 135 3.09e-25 103
Msa0450240 AT3G27920.1 45.455 99 53 1 178 275 14 112 3.09e-25 103
Msa0450240 AT5G54230.1 38.333 180 95 6 180 348 14 188 5.21e-25 105
Msa0450240 AT5G56110.1 45.455 110 59 1 174 282 8 117 6.13e-25 105
Msa0450240 AT3G12720.1 45.192 104 54 2 180 281 24 126 8.38e-25 104
Msa0450240 AT4G09460.1 48.039 102 52 1 180 280 14 115 1.00e-24 102
Msa0450240 AT1G66230.1 43.243 111 60 2 175 283 9 118 1.22e-24 103
Msa0450240 AT5G35550.1 45.217 115 58 3 180 292 16 127 1.36e-24 102
Msa0450240 AT5G61420.2 44.828 116 61 2 166 280 2 115 1.70e-24 105
Msa0450240 AT5G17800.1 42.241 116 67 0 180 295 93 208 2.71e-24 103
Msa0450240 AT4G34990.1 47.222 108 55 2 180 286 14 120 3.45e-24 102
Msa0450240 AT5G60890.1 48.148 108 54 2 180 286 14 120 3.92e-24 102
Msa0450240 AT4G12350.1 43.243 111 60 2 175 283 9 118 3.93e-24 102
Msa0450240 AT3G61250.1 37.736 159 74 4 175 331 9 144 4.33e-24 102
Msa0450240 AT3G13540.1 36.364 121 76 1 165 284 10 130 5.29e-24 100
Msa0450240 AT2G16720.1 49.533 107 50 3 180 283 14 119 5.46e-24 101
Msa0450240 AT5G07700.1 47.059 102 53 1 180 280 14 115 5.78e-24 102
Msa0450240 AT5G07700.2 47.059 102 53 1 180 280 14 115 5.78e-24 102
Msa0450240 AT1G17950.1 42.017 119 66 1 180 295 5 123 7.45e-24 100
Msa0450240 AT1G35515.1 41.667 120 67 2 166 284 2 119 8.64e-24 99.4
Msa0450240 AT1G63910.1 43.810 105 58 1 180 283 14 118 8.95e-24 102
Msa0450240 AT5G16600.1 43.243 111 60 2 175 283 9 118 1.06e-23 102
Msa0450240 AT3G27810.1 33.133 166 91 2 180 344 22 168 1.20e-23 99.4
Msa0450240 AT1G18570.1 42.105 114 65 1 172 284 7 120 1.36e-23 102
Msa0450240 AT2G47190.1 46.078 102 54 1 180 280 22 123 1.44e-23 100
Msa0450240 AT3G23250.1 41.667 108 62 1 174 280 8 115 1.98e-23 100
Msa0450240 AT3G24310.1 45.946 111 52 3 180 288 20 124 2.21e-23 99.8
Msa0450240 AT5G16770.4 45.631 103 55 1 180 281 14 116 3.26e-23 100
Msa0450240 AT5G16770.3 45.631 103 55 1 180 281 14 116 3.26e-23 100
Msa0450240 AT1G06180.1 42.149 121 63 4 167 283 3 120 3.64e-23 98.6
Msa0450240 AT5G16770.1 45.631 103 55 1 180 281 14 116 4.08e-23 100
Msa0450240 AT5G16770.2 45.631 103 55 1 180 281 14 116 4.08e-23 100
Msa0450240 AT4G13480.1 40.496 121 69 2 180 298 8 127 4.98e-23 98.6
Msa0450240 AT4G01680.1 41.509 106 61 1 180 284 14 119 5.29e-23 100
Msa0450240 AT5G10280.1 45.631 103 53 2 180 280 14 115 5.71e-23 100
Msa0450240 AT3G08500.1 43.689 103 57 1 180 281 32 134 6.25e-23 100
Msa0450240 AT5G14340.1 32.710 214 113 8 166 374 14 201 6.57e-23 98.6
Msa0450240 AT4G01680.3 41.509 106 61 1 180 284 14 119 6.70e-23 97.8
Msa0450240 AT1G74080.1 40.602 133 77 2 180 311 14 145 8.50e-23 99.4
Msa0450240 AT3G13890.2 41.176 102 59 1 180 280 14 115 9.09e-23 99.8
Msa0450240 AT3G02940.2 45.098 102 55 1 180 280 14 115 9.84e-23 99.0
Msa0450240 AT1G73410.1 46.729 107 54 1 180 283 6 112 9.94e-23 97.4
Msa0450240 AT3G30210.1 47.368 95 49 1 180 273 29 123 1.08e-22 97.8
Msa0450240 AT3G02940.1 45.098 102 55 1 180 280 14 115 1.34e-22 98.6
Msa0450240 AT3G02940.3 45.098 102 55 1 180 280 14 115 1.34e-22 98.6
Msa0450240 AT5G65230.1 45.631 103 53 2 180 280 14 115 1.49e-22 98.2
Msa0450240 AT5G40350.1 41.818 110 62 2 180 288 19 127 1.65e-22 95.9
Msa0450240 AT5G62320.1 33.854 192 113 5 165 347 2 188 1.95e-22 96.7
Msa0450240 AT1G68320.1 42.157 102 58 1 180 280 21 122 2.18e-22 97.4
Msa0450240 AT1G73410.2 46.729 107 54 1 180 283 6 112 2.46e-22 95.1
Msa0450240 AT3G62610.1 41.667 108 62 1 174 280 8 115 3.06e-22 98.2
Msa0450240 AT3G01530.1 44.118 102 56 1 180 280 27 128 3.33e-22 94.7
Msa0450240 AT5G26660.2 36.364 132 81 2 213 344 17 145 3.37e-22 97.4
Msa0450240 AT1G25340.1 38.346 133 62 2 180 311 20 133 4.19e-22 96.3
Msa0450240 AT2G31180.1 39.640 111 66 1 174 283 8 118 4.24e-22 95.5
Msa0450240 AT5G62470.1 40.909 110 65 0 174 283 8 117 4.44e-22 97.8
Msa0450240 AT5G15310.1 41.818 110 63 1 175 283 9 118 4.56e-22 97.1
Msa0450240 AT3G13890.1 39.640 111 57 1 180 280 14 124 4.88e-22 97.8
Msa0450240 AT5G15310.2 41.818 110 63 1 175 283 9 118 5.06e-22 97.1
Msa0450240 AT4G17785.2 43.689 103 55 2 180 280 15 116 5.81e-22 97.4
Msa0450240 AT4G17785.1 43.689 103 55 2 180 280 15 116 6.25e-22 97.4
Msa0450240 AT5G15310.4 41.818 110 63 1 175 283 9 118 6.49e-22 95.1
Msa0450240 AT3G60460.1 44.348 115 60 3 167 279 2 114 6.97e-22 96.3
Msa0450240 AT5G59780.3 40.909 110 62 2 178 285 8 116 9.40e-22 94.4
Msa0450240 AT1G66370.1 40.870 115 59 2 180 289 10 120 1.05e-21 94.4
Msa0450240 AT1G18710.1 42.593 108 60 2 180 286 14 120 1.29e-21 94.7
Msa0450240 AT1G48000.1 42.202 109 61 2 176 283 30 137 1.34e-21 94.0
Msa0450240 AT4G01680.2 38.983 118 59 2 180 284 14 131 1.38e-21 96.3
Msa0450240 AT3G53200.1 42.623 122 63 3 173 292 4 120 1.43e-21 94.0
Msa0450240 AT3G46130.1 42.593 108 59 2 180 285 11 117 1.47e-21 94.4
Msa0450240 AT3G01140.2 41.818 110 63 1 175 283 9 118 1.54e-21 95.9
Msa0450240 AT1G56160.1 39.831 118 66 3 167 282 5 119 1.57e-21 95.1
Msa0450240 AT1G25340.2 37.879 132 59 2 180 311 20 128 1.75e-21 94.7
Msa0450240 AT3G01140.1 41.818 110 63 1 175 283 52 161 1.79e-21 96.3
Msa0450240 AT5G52600.1 41.121 107 62 1 180 285 14 120 2.07e-21 92.4
Msa0450240 AT1G66380.1 44.860 107 50 2 180 281 10 112 3.52e-21 89.7
Msa0450240 AT1G25340.3 37.879 132 59 2 180 311 20 128 3.78e-21 94.4
Msa0450240 AT1G08810.1 42.727 110 62 1 175 283 9 118 4.52e-21 93.6
Msa0450240 AT2G47460.1 39.815 108 64 1 174 280 8 115 5.17e-21 94.7
Msa0450240 AT3G47600.1 40.909 110 64 1 175 283 9 118 7.27e-21 94.0
Msa0450240 AT1G34670.1 43.137 102 57 1 180 280 14 115 7.66e-21 94.4
Msa0450240 AT4G37780.1 37.069 116 71 2 175 288 9 124 8.46e-21 93.2
Msa0450240 AT3G48920.1 43.564 101 56 1 180 279 20 120 1.28e-20 91.7
Msa0450240 AT5G62470.2 40.541 111 65 1 174 283 8 118 1.37e-20 93.2
Msa0450240 AT5G39700.1 38.281 128 77 1 159 286 37 162 1.59e-20 89.7
Msa0450240 AT1G16490.1 39.450 109 65 1 175 282 11 119 1.63e-20 91.7
Msa0450240 AT4G25560.1 40.952 105 61 1 180 283 12 116 1.76e-20 91.7
Msa0450240 AT1G79180.1 37.288 118 73 1 175 291 11 128 1.91e-20 92.0
Msa0450240 AT5G49330.1 39.815 108 64 1 174 280 8 115 3.16e-20 92.0
Msa0450240 AT5G49620.1 32.203 177 88 3 171 334 19 176 4.05e-20 91.3
Msa0450240 AT1G74650.1 39.823 113 67 1 174 285 8 120 4.87e-20 91.3
Msa0450240 AT3G28910.1 41.905 105 60 1 180 283 14 118 7.41e-20 90.9
Msa0450240 AT5G65790.1 39.062 128 75 3 175 300 9 135 9.47e-20 91.3
Msa0450240 AT5G57620.1 40.708 113 65 2 175 285 9 121 1.17e-19 90.5
Msa0450240 AT5G35550.2 48.750 80 39 1 213 292 53 130 2.23e-19 88.2
Msa0450240 AT5G14750.3 39.326 89 52 1 210 296 13 101 4.06e-19 85.1
Msa0450240 AT3G49690.1 41.667 108 61 2 175 280 9 116 8.22e-19 87.4
Msa0450240 AT1G56650.1 46.535 101 45 2 180 275 10 106 9.77e-19 85.9
Msa0450240 AT1G14350.2 40.860 93 55 0 183 275 28 120 1.59e-18 88.2
Msa0450240 AT1G14350.1 40.860 93 55 0 183 275 28 120 1.59e-18 88.2
Msa0450240 AT5G52260.1 41.071 112 63 2 180 289 14 124 1.77e-18 85.5
Msa0450240 AT5G23000.1 41.026 117 63 3 167 280 3 116 2.31e-18 86.3
Msa0450240 AT3G12820.1 39.252 107 62 2 180 284 16 121 3.53e-18 84.3
Msa0450240 AT2G02820.3 41.111 90 53 0 183 272 33 122 8.96e-18 84.7
Msa0450240 AT2G02820.2 39.785 93 56 0 183 275 33 125 1.36e-17 85.5
Msa0450240 AT2G02820.1 39.785 93 56 0 183 275 33 125 1.48e-17 85.5
Msa0450240 AT1G66390.1 45.545 101 46 2 180 275 10 106 2.45e-17 82.0
Msa0450240 AT3G06490.1 35.537 121 74 3 166 284 7 125 3.12e-17 83.2
Msa0450240 AT1G79180.2 44.304 79 44 0 213 291 83 161 5.31e-17 82.4
Msa0450240 AT3G27810.2 32.576 132 70 1 213 344 7 119 5.95e-17 79.0
Msa0450240 AT5G49620.2 29.843 191 88 4 171 334 19 190 6.62e-17 82.0
Msa0450240 AT3G53200.2 47.500 80 38 1 213 292 12 87 1.97e-16 78.2
Msa0450240 AT2G36890.1 38.889 108 64 2 175 280 9 116 2.50e-16 80.1
Msa0450240 AT2G36890.2 38.889 108 64 2 175 280 50 157 3.96e-16 80.1
Msa0450240 AT3G12820.2 45.833 72 39 0 213 284 2 73 5.62e-16 76.6
Msa0450240 AT2G37630.1 42.056 107 59 2 182 285 6 112 6.78e-16 79.7
Msa0450240 AT5G40350.2 44.737 76 41 1 213 288 8 82 9.58e-16 75.5
Msa0450240 AT3G18100.1 40.426 94 56 0 180 273 546 639 1.36e-15 80.1
Msa0450240 AT3G18100.1 29.032 155 102 4 120 273 441 588 1.27e-12 70.9
Msa0450240 AT3G18100.3 40.426 94 56 0 180 273 498 591 1.73e-15 79.7
Msa0450240 AT3G18100.3 29.032 155 102 4 120 273 393 540 1.38e-12 70.5
Msa0450240 AT5G59780.2 41.096 73 43 0 213 285 23 95 2.10e-15 75.5
Msa0450240 AT3G18100.4 40.426 94 56 0 180 273 385 478 2.48e-15 79.0
Msa0450240 AT3G18100.4 29.032 155 102 4 120 273 280 427 2.99e-12 69.3
Msa0450240 AT3G18100.2 40.426 94 56 0 180 273 333 426 2.81e-15 79.0
Msa0450240 AT3G18100.2 29.032 155 102 4 120 273 228 375 3.58e-12 68.9
Msa0450240 AT1G22640.3 52.459 61 29 0 224 284 2 62 4.60e-15 74.3
Msa0450240 AT3G46130.3 41.096 73 43 0 213 285 13 85 6.08e-15 74.3
Msa0450240 AT3G46130.4 41.096 73 43 0 213 285 23 95 6.30e-15 74.7
Msa0450240 AT1G71030.2 41.176 68 40 0 216 283 5 72 2.76e-14 71.6
Msa0450240 AT1G71030.1 41.176 68 40 0 216 283 19 86 3.02e-14 71.6
Msa0450240 AT3G47600.2 36.842 95 49 1 189 283 29 112 5.12e-14 73.6
Msa0450240 AT5G14750.4 35.616 73 47 0 224 296 2 74 1.06e-13 68.9
Msa0450240 AT5G14750.2 35.616 73 47 0 224 296 2 74 1.06e-13 68.9
Msa0450240 AT1G66380.3 46.377 69 37 0 213 281 11 79 2.82e-13 66.2
Msa0450240 AT3G23250.2 45.614 57 31 0 224 280 2 58 1.49e-11 64.7

Find 71 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAAATGGAAAATAATTT+TGG 0.166549 3_3:+35611792 None:intergenic
GTTATGGATAATTTCTTATA+TGG 0.202096 3_3:-35611878 Msa0450240:CDS
AAGAAGATCAACTTTATAAA+AGG 0.205425 3_3:-35611626 Msa0450240:CDS
GTTTCTTGAGAAATATTAAA+TGG 0.212262 3_3:+35611779 None:intergenic
GATGAGAATTTGTTTCAAAA+TGG 0.230233 3_3:-35610429 Msa0450240:CDS
CTTTGATCTACCCTTTCTTT+TGG 0.231362 3_3:+35610674 None:intergenic
AATTTCTTATATGGAGGTTA+TGG 0.237242 3_3:-35611869 Msa0450240:CDS
AGAAATGCCACTAGATATTA+TGG 0.284041 3_3:-35610319 Msa0450240:CDS
TCATCTAAAGCCTGACATTA+AGG 0.317779 3_3:-35611315 Msa0450240:intron
GAGAACATGGTTTGAGAAAA+TGG 0.322172 3_3:-35611400 Msa0450240:CDS
TAAGAAGGAGATGGATTTGA+TGG 0.326017 3_3:-35610274 Msa0450240:CDS
TTTGTAGAAGAGTTCCTTTA+GGG 0.335398 3_3:+35610649 None:intergenic
TGGCATGAACAGAAATAATA+AGG 0.340684 3_3:-35611687 Msa0450240:CDS
ATTTCTTATATGGAGGTTAT+GGG 0.352587 3_3:-35611868 Msa0450240:CDS
TGCTGAAGCTGATCAAATTA+TGG 0.373684 3_3:-35610370 Msa0450240:CDS
TTCTCTTTGTTGCATTCCAA+TGG 0.381694 3_3:+35610706 None:intergenic
GGTACCAAACACTGATCATT+AGG 0.389697 3_3:+35610489 None:intergenic
CCCGGAAACAGGATTGAAAA+AGG 0.389806 3_3:+35611997 None:intergenic
ATGAGAATTTGTTTCAAAAT+GGG 0.396459 3_3:-35610428 Msa0450240:CDS
GGAGTGGTTCCTTCATCTCA+TGG 0.406341 3_3:-35612070 Msa0450240:CDS
AAACAGGTTGTTGGTTCAGC+TGG 0.412723 3_3:-35611426 Msa0450240:intron
GAGAATTTGCCTGGTAGAAT+AGG 0.417263 3_3:-35611365 Msa0450240:CDS
AATGGGCGGAGATAGCTAAA+AGG 0.422785 3_3:-35610761 Msa0450240:CDS
ACAGAAAACAATAGTGGTAA+TGG 0.423598 3_3:-35611911 Msa0450240:CDS
GAAATTATGATGAACATCAT+AGG 0.428182 3_3:+35611943 None:intergenic
TCAGGCTTTCTAGAGGCATA+AGG 0.428609 3_3:+35611659 None:intergenic
ATGAAGAGATAGGAAACAAA+TGG 0.432519 3_3:-35610779 Msa0450240:CDS
GTTCAGCTGGTTGGAGAACA+TGG 0.436361 3_3:-35611413 Msa0450240:CDS
GGAGATGGATTTGATGGAGA+TGG 0.438443 3_3:-35610268 Msa0450240:CDS
TTTGATTATTCCTTTGAGAA+AGG 0.439027 3_3:+35611834 None:intergenic
GAATAATCAAATGGAAATGA+TGG 0.445628 3_3:-35611822 Msa0450240:CDS
CCTTATTGCAGAAGGACATA+TGG 0.449990 3_3:-35610836 Msa0450240:intron
AAGACAATACTCCAAAAGAA+AGG 0.464183 3_3:-35610685 Msa0450240:CDS
TAAGAATTCACCTTAATGTC+AGG 0.466977 3_3:+35611305 None:intergenic
AGAAGATCAACTTTATAAAA+GGG 0.467069 3_3:-35611625 Msa0450240:CDS
TAATGGTCATGCTTATGTTA+TGG 0.467483 3_3:-35611894 Msa0450240:CDS
GGACATATGGAGTGAGGAAG+AGG 0.467712 3_3:-35610823 Msa0450240:CDS
CATATTGCTGAGAATTTGCC+TGG 0.468585 3_3:-35611374 Msa0450240:CDS
ATCAAAGCACATGAAGAGAT+AGG 0.469111 3_3:-35610789 Msa0450240:CDS
TTCTCAAAGGAATAATCAAA+TGG 0.473969 3_3:-35611831 Msa0450240:CDS
GTGAATTATTACAAAAGAGT+TGG 0.476372 3_3:-35611707 Msa0450240:CDS
TACAACACTATTCAAAGGCT+TGG 0.480870 3_3:+35611757 None:intergenic
TGAAAGAATCCATGAGATGA+AGG 0.488924 3_3:+35612061 None:intergenic
TGGCTATAATCTAGAAAAGA+AGG 0.490918 3_3:-35610037 Msa0450240:CDS
GATATGCATGAGACTTCATC+TGG 0.491162 3_3:+35611734 None:intergenic
GCTTGGAGTTGAAGTTAAGA+AGG 0.493540 3_3:-35610289 Msa0450240:CDS
GATGAAGGAACCACTCCAAA+AGG 0.497596 3_3:+35612076 None:intergenic
AGTTGAAGTTAAGAAGGAGA+TGG 0.502240 3_3:-35610283 Msa0450240:CDS
ATGGATAATTTCTTATATGG+AGG 0.512418 3_3:-35611875 Msa0450240:CDS
GATATTATGGAATCTATGCT+TGG 0.512953 3_3:-35610306 Msa0450240:CDS
TTTGGTAATGACATCAACAT+TGG 0.526123 3_3:-35610207 Msa0450240:intron
TTTCTTCTATAATCTTTCGG+AGG 0.530747 3_3:+35610594 None:intergenic
GGTAGATCAAAGTACCCTAA+AGG 0.542452 3_3:-35610663 Msa0450240:CDS
AGGTTGTTGGTTCAGCTGGT+TGG 0.546665 3_3:-35611422 Msa0450240:CDS
AGACAATACTCCAAAAGAAA+GGG 0.551275 3_3:-35610684 Msa0450240:CDS
TGAAGAGATAGGAAACAAAT+GGG 0.553849 3_3:-35610778 Msa0450240:CDS
TCTGGTACAACACTATTCAA+AGG 0.554355 3_3:+35611752 None:intergenic
TTCTTCTATAATCTTTCGGA+GGG 0.559200 3_3:+35610595 None:intergenic
AACTTTCTCAGGCTTTCTAG+AGG 0.574016 3_3:+35611652 None:intergenic
GAGATAGCTAAAAGGTTACC+AGG 0.574186 3_3:-35610753 Msa0450240:CDS
TTCAGTTTGTTGAGACTGAG+AGG 0.582327 3_3:+35610521 None:intergenic
GGATAATGTTGTGCATCTGT+TGG 0.585302 3_3:+35610542 None:intergenic
GAAGCTGATCAAATTATGGA+AGG 0.586708 3_3:-35610366 Msa0450240:CDS
ACATCATCAAAATCACAAGT+TGG 0.586726 3_3:+35610468 None:intergenic
TCAACTTTATAAAAGGGCAA+TGG 0.588167 3_3:-35611619 Msa0450240:CDS
TGAACAACAACCTTTCTCAA+AGG 0.590668 3_3:-35611844 Msa0450240:CDS
GAAAACAATGCAGAGAGAGA+TGG 0.604304 3_3:-35611343 Msa0450240:CDS
AATGGACAGTAGAAGAAGAT+CGG 0.617069 3_3:-35611601 Msa0450240:intron
ATAGATTCCATAATATCTAG+TGG 0.637129 3_3:+35610312 None:intergenic
GCAGAAGGACATATGGAGTG+AGG 0.656245 3_3:-35610829 Msa0450240:intron
AGAGATAGGAAACAAATGGG+CGG 0.736615 3_3:-35610775 Msa0450240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAATGGAAAATAATTT+TGG + chr3_3:35610358-35610377 None:intergenic 10.0%
!!! TATTAAATGGAAAATAATTT+TGG + chr3_3:35610358-35610377 None:intergenic 10.0%
!!! TTCTCATAATTTTTTATGTT+GGG + chr3_3:35610050-35610069 None:intergenic 15.0%
!!! ATTCTCATAATTTTTTATGT+TGG + chr3_3:35610051-35610070 None:intergenic 15.0%
!!! AAAAAAAAAGTACCTATAAA+AGG + chr3_3:35610648-35610667 None:intergenic 15.0%
!!! AAAAAGTACAAATAATAATG+TGG - chr3_3:35611044-35611063 Msa0450240:intron 15.0%
!!! TTCTCATAATTTTTTATGTT+GGG + chr3_3:35610050-35610069 None:intergenic 15.0%
!!! ATTCTCATAATTTTTTATGT+TGG + chr3_3:35610051-35610070 None:intergenic 15.0%
!!! AAAAAAAAAGTACCTATAAA+AGG + chr3_3:35610648-35610667 None:intergenic 15.0%
!!! AAAAAGTACAAATAATAATG+TGG - chr3_3:35611044-35611063 Msa0450240:intron 15.0%
!!! AAAAATTATGAGAATCCTTT+TGG - chr3_3:35610056-35610075 Msa0450240:CDS 20.0%
!! GTTATGGATAATTTCTTATA+TGG - chr3_3:35610269-35610288 Msa0450240:CDS 20.0%
!! GTTTCTTGAGAAATATTAAA+TGG + chr3_3:35610371-35610390 None:intergenic 20.0%
!! AAGAAGATCAACTTTATAAA+AGG - chr3_3:35610521-35610540 Msa0450240:CDS 20.0%
!! AGAAGATCAACTTTATAAAA+GGG - chr3_3:35610522-35610541 Msa0450240:CDS 20.0%
!!! GTACTTTTTTTTTACCAATT+TGG - chr3_3:35610655-35610674 Msa0450240:CDS 20.0%
!! TTTAGATCAAAATTCCAAAT+TGG + chr3_3:35610672-35610691 None:intergenic 20.0%
!!! TTTGGAATTTTGATCTAAAA+AGG - chr3_3:35610673-35610692 Msa0450240:CDS 20.0%
!!! ATGAGAATTTGTTTCAAAAT+GGG - chr3_3:35611719-35611738 Msa0450240:CDS 20.0%
!!! AAAAATTATGAGAATCCTTT+TGG - chr3_3:35610056-35610075 Msa0450240:CDS 20.0%
!! GTTATGGATAATTTCTTATA+TGG - chr3_3:35610269-35610288 Msa0450240:CDS 20.0%
!! GTTTCTTGAGAAATATTAAA+TGG + chr3_3:35610371-35610390 None:intergenic 20.0%
!! AAGAAGATCAACTTTATAAA+AGG - chr3_3:35610521-35610540 Msa0450240:CDS 20.0%
!! AGAAGATCAACTTTATAAAA+GGG - chr3_3:35610522-35610541 Msa0450240:CDS 20.0%
!!! GTACTTTTTTTTTACCAATT+TGG - chr3_3:35610655-35610674 Msa0450240:CDS 20.0%
!! TTTAGATCAAAATTCCAAAT+TGG + chr3_3:35610672-35610691 None:intergenic 20.0%
!!! TTTGGAATTTTGATCTAAAA+AGG - chr3_3:35610673-35610692 Msa0450240:CDS 20.0%
!!! ATGAGAATTTGTTTCAAAAT+GGG - chr3_3:35611719-35611738 Msa0450240:CDS 20.0%
! GAAATTATGATGAACATCAT+AGG + chr3_3:35610207-35610226 None:intergenic 25.0%
!! TCTTTTACAGAAAACAATAG+TGG - chr3_3:35610230-35610249 Msa0450240:CDS 25.0%
! ATGGATAATTTCTTATATGG+AGG - chr3_3:35610272-35610291 Msa0450240:CDS 25.0%
! AATTTCTTATATGGAGGTTA+TGG - chr3_3:35610278-35610297 Msa0450240:CDS 25.0%
! ATTTCTTATATGGAGGTTAT+GGG - chr3_3:35610279-35610298 Msa0450240:CDS 25.0%
!! TTTGATTATTCCTTTGAGAA+AGG + chr3_3:35610316-35610335 None:intergenic 25.0%
! TTCTCAAAGGAATAATCAAA+TGG - chr3_3:35610316-35610335 Msa0450240:CDS 25.0%
! GAATAATCAAATGGAAATGA+TGG - chr3_3:35610325-35610344 Msa0450240:CDS 25.0%
!! TCTTTTGTAATAATTCACTG+AGG + chr3_3:35610438-35610457 None:intergenic 25.0%
! GTGAATTATTACAAAAGAGT+TGG - chr3_3:35610440-35610459 Msa0450240:CDS 25.0%
!!! ATCTTCTTTTTAACTTTCTC+AGG + chr3_3:35610509-35610528 None:intergenic 25.0%
! TAATAAATCTTCGTTGAAGT+TGG - chr3_3:35610971-35610990 Msa0450240:intron 25.0%
! TGTTTGCAATAAGATGTTTA+AGG - chr3_3:35611084-35611103 Msa0450240:intron 25.0%
!!! TACTTCACATTTCTTGTTTT+TGG - chr3_3:35611113-35611132 Msa0450240:intron 25.0%
! AAAACTCAATCAAAAACCAT+TGG - chr3_3:35611425-35611444 Msa0450240:intron 25.0%
!! GGTTTTCTTCTATAATCTTT+CGG + chr3_3:35611559-35611578 None:intergenic 25.0%
!! GATGAGAATTTGTTTCAAAA+TGG - chr3_3:35611718-35611737 Msa0450240:CDS 25.0%
! ATAGATTCCATAATATCTAG+TGG + chr3_3:35611838-35611857 None:intergenic 25.0%
!!! TTTTCAAGTGACTCATATTT+TGG - chr3_3:35611922-35611941 Msa0450240:CDS 25.0%
!!! TTCAACAAGTATGTGTTTTT+TGG - chr3_3:35611999-35612018 Msa0450240:CDS 25.0%
!!! TTTTTTGGAGAAAATTCAGA+AGG - chr3_3:35612014-35612033 Msa0450240:CDS 25.0%
! GAAATTATGATGAACATCAT+AGG + chr3_3:35610207-35610226 None:intergenic 25.0%
!! TCTTTTACAGAAAACAATAG+TGG - chr3_3:35610230-35610249 Msa0450240:CDS 25.0%
! ATGGATAATTTCTTATATGG+AGG - chr3_3:35610272-35610291 Msa0450240:CDS 25.0%
! AATTTCTTATATGGAGGTTA+TGG - chr3_3:35610278-35610297 Msa0450240:CDS 25.0%
! ATTTCTTATATGGAGGTTAT+GGG - chr3_3:35610279-35610298 Msa0450240:CDS 25.0%
!! TTTGATTATTCCTTTGAGAA+AGG + chr3_3:35610316-35610335 None:intergenic 25.0%
! TTCTCAAAGGAATAATCAAA+TGG - chr3_3:35610316-35610335 Msa0450240:CDS 25.0%
! GAATAATCAAATGGAAATGA+TGG - chr3_3:35610325-35610344 Msa0450240:CDS 25.0%
!! TCTTTTGTAATAATTCACTG+AGG + chr3_3:35610438-35610457 None:intergenic 25.0%
! GTGAATTATTACAAAAGAGT+TGG - chr3_3:35610440-35610459 Msa0450240:CDS 25.0%
!!! ATCTTCTTTTTAACTTTCTC+AGG + chr3_3:35610509-35610528 None:intergenic 25.0%
! TAATAAATCTTCGTTGAAGT+TGG - chr3_3:35610971-35610990 Msa0450240:intron 25.0%
! TGTTTGCAATAAGATGTTTA+AGG - chr3_3:35611084-35611103 Msa0450240:intron 25.0%
!!! TACTTCACATTTCTTGTTTT+TGG - chr3_3:35611113-35611132 Msa0450240:intron 25.0%
! AAAACTCAATCAAAAACCAT+TGG - chr3_3:35611425-35611444 Msa0450240:intron 25.0%
!! GGTTTTCTTCTATAATCTTT+CGG + chr3_3:35611559-35611578 None:intergenic 25.0%
!! GATGAGAATTTGTTTCAAAA+TGG - chr3_3:35611718-35611737 Msa0450240:CDS 25.0%
! ATAGATTCCATAATATCTAG+TGG + chr3_3:35611838-35611857 None:intergenic 25.0%
!!! TTTTCAAGTGACTCATATTT+TGG - chr3_3:35611922-35611941 Msa0450240:CDS 25.0%
!!! TTCAACAAGTATGTGTTTTT+TGG - chr3_3:35611999-35612018 Msa0450240:CDS 25.0%
!!! TTTTTTGGAGAAAATTCAGA+AGG - chr3_3:35612014-35612033 Msa0450240:CDS 25.0%
! TTTTTATGTTGGGTTTCAAG+TGG + chr3_3:35610040-35610059 None:intergenic 30.0%
! AAGATCAAAATTTTTGACCC+CGG + chr3_3:35610171-35610190 None:intergenic 30.0%
ACAGAAAACAATAGTGGTAA+TGG - chr3_3:35610236-35610255 Msa0450240:CDS 30.0%
TAATGGTCATGCTTATGTTA+TGG - chr3_3:35610253-35610272 Msa0450240:CDS 30.0%
TGGCATGAACAGAAATAATA+AGG - chr3_3:35610460-35610479 Msa0450240:CDS 30.0%
TCAACTTTATAAAAGGGCAA+TGG - chr3_3:35610528-35610547 Msa0450240:CDS 30.0%
!! GTGACTGTTTTTCCTTTTAT+AGG - chr3_3:35610633-35610652 Msa0450240:CDS 30.0%
TAAGAATTCACCTTAATGTC+AGG + chr3_3:35610845-35610864 None:intergenic 30.0%
CTTCTTTATAGACTATCGAA+GGG + chr3_3:35610946-35610965 None:intergenic 30.0%
ACTTCTTTATAGACTATCGA+AGG + chr3_3:35610947-35610966 None:intergenic 30.0%
! GATGAGACATACATTTGTTA+GGG + chr3_3:35611004-35611023 None:intergenic 30.0%
AGATGAGACATACATTTGTT+AGG + chr3_3:35611005-35611024 None:intergenic 30.0%
TATTGCAAACACATGTGTAT+CGG + chr3_3:35611075-35611094 None:intergenic 30.0%
! TGCAATAAGATGTTTAAGGT+AGG - chr3_3:35611088-35611107 Msa0450240:intron 30.0%
ATGAAGAGATAGGAAACAAA+TGG - chr3_3:35611368-35611387 Msa0450240:CDS 30.0%
TGAAGAGATAGGAAACAAAT+GGG - chr3_3:35611369-35611388 Msa0450240:CDS 30.0%
AAGACAATACTCCAAAAGAA+AGG - chr3_3:35611462-35611481 Msa0450240:intron 30.0%
AGACAATACTCCAAAAGAAA+GGG - chr3_3:35611463-35611482 Msa0450240:intron 30.0%
TTTGTAGAAGAGTTCCTTTA+GGG + chr3_3:35611501-35611520 None:intergenic 30.0%
! TTTTGTAGAAGAGTTCCTTT+AGG + chr3_3:35611502-35611521 None:intergenic 30.0%
TTCTTCTATAATCTTTCGGA+GGG + chr3_3:35611555-35611574 None:intergenic 30.0%
TTTCTTCTATAATCTTTCGG+AGG + chr3_3:35611556-35611575 None:intergenic 30.0%
! TTTTTCATAGCATTAGCTGA+AGG + chr3_3:35611580-35611599 None:intergenic 30.0%
! TTTTCCTAATGATCAGTGTT+TGG - chr3_3:35611654-35611673 Msa0450240:CDS 30.0%
ACATCATCAAAATCACAAGT+TGG + chr3_3:35611682-35611701 None:intergenic 30.0%
TTCTCATCGAAAGAAAAATC+CGG + chr3_3:35611706-35611725 None:intergenic 30.0%
AGAAATGCCACTAGATATTA+TGG - chr3_3:35611828-35611847 Msa0450240:CDS 30.0%
GATATTATGGAATCTATGCT+TGG - chr3_3:35611841-35611860 Msa0450240:CDS 30.0%
!! TTTGGTAATGACATCAACAT+TGG - chr3_3:35611940-35611959 Msa0450240:CDS 30.0%
!! AACATTGGTTTGTGATAACA+TGG - chr3_3:35611955-35611974 Msa0450240:CDS 30.0%
TGGCTATAATCTAGAAAAGA+AGG - chr3_3:35612110-35612129 Msa0450240:CDS 30.0%
! TTTTTATGTTGGGTTTCAAG+TGG + chr3_3:35610040-35610059 None:intergenic 30.0%
! AAGATCAAAATTTTTGACCC+CGG + chr3_3:35610171-35610190 None:intergenic 30.0%
ACAGAAAACAATAGTGGTAA+TGG - chr3_3:35610236-35610255 Msa0450240:CDS 30.0%
TAATGGTCATGCTTATGTTA+TGG - chr3_3:35610253-35610272 Msa0450240:CDS 30.0%
TGGCATGAACAGAAATAATA+AGG - chr3_3:35610460-35610479 Msa0450240:CDS 30.0%
TCAACTTTATAAAAGGGCAA+TGG - chr3_3:35610528-35610547 Msa0450240:CDS 30.0%
!! GTGACTGTTTTTCCTTTTAT+AGG - chr3_3:35610633-35610652 Msa0450240:CDS 30.0%
TAAGAATTCACCTTAATGTC+AGG + chr3_3:35610845-35610864 None:intergenic 30.0%
CTTCTTTATAGACTATCGAA+GGG + chr3_3:35610946-35610965 None:intergenic 30.0%
ACTTCTTTATAGACTATCGA+AGG + chr3_3:35610947-35610966 None:intergenic 30.0%
! GATGAGACATACATTTGTTA+GGG + chr3_3:35611004-35611023 None:intergenic 30.0%
AGATGAGACATACATTTGTT+AGG + chr3_3:35611005-35611024 None:intergenic 30.0%
TATTGCAAACACATGTGTAT+CGG + chr3_3:35611075-35611094 None:intergenic 30.0%
! TGCAATAAGATGTTTAAGGT+AGG - chr3_3:35611088-35611107 Msa0450240:intron 30.0%
ATGAAGAGATAGGAAACAAA+TGG - chr3_3:35611368-35611387 Msa0450240:CDS 30.0%
TGAAGAGATAGGAAACAAAT+GGG - chr3_3:35611369-35611388 Msa0450240:CDS 30.0%
AAGACAATACTCCAAAAGAA+AGG - chr3_3:35611462-35611481 Msa0450240:intron 30.0%
AGACAATACTCCAAAAGAAA+GGG - chr3_3:35611463-35611482 Msa0450240:intron 30.0%
TTTGTAGAAGAGTTCCTTTA+GGG + chr3_3:35611501-35611520 None:intergenic 30.0%
! TTTTGTAGAAGAGTTCCTTT+AGG + chr3_3:35611502-35611521 None:intergenic 30.0%
TTCTTCTATAATCTTTCGGA+GGG + chr3_3:35611555-35611574 None:intergenic 30.0%
TTTCTTCTATAATCTTTCGG+AGG + chr3_3:35611556-35611575 None:intergenic 30.0%
! TTTTTCATAGCATTAGCTGA+AGG + chr3_3:35611580-35611599 None:intergenic 30.0%
! TTTTCCTAATGATCAGTGTT+TGG - chr3_3:35611654-35611673 Msa0450240:CDS 30.0%
ACATCATCAAAATCACAAGT+TGG + chr3_3:35611682-35611701 None:intergenic 30.0%
TTCTCATCGAAAGAAAAATC+CGG + chr3_3:35611706-35611725 None:intergenic 30.0%
AGAAATGCCACTAGATATTA+TGG - chr3_3:35611828-35611847 Msa0450240:CDS 30.0%
GATATTATGGAATCTATGCT+TGG - chr3_3:35611841-35611860 Msa0450240:CDS 30.0%
!! TTTGGTAATGACATCAACAT+TGG - chr3_3:35611940-35611959 Msa0450240:CDS 30.0%
!! AACATTGGTTTGTGATAACA+TGG - chr3_3:35611955-35611974 Msa0450240:CDS 30.0%
TGGCTATAATCTAGAAAAGA+AGG - chr3_3:35612110-35612129 Msa0450240:CDS 30.0%
!! TTATGAGAATCCTTTTGGAG+TGG - chr3_3:35610061-35610080 Msa0450240:CDS 35.0%
TGAAAGAATCCATGAGATGA+AGG + chr3_3:35610089-35610108 None:intergenic 35.0%
!!! ACCTTTTTCAATCCTGTTTC+CGG - chr3_3:35610149-35610168 Msa0450240:intron 35.0%
TGAACAACAACCTTTCTCAA+AGG - chr3_3:35610303-35610322 Msa0450240:CDS 35.0%
TACAACACTATTCAAAGGCT+TGG + chr3_3:35610393-35610412 None:intergenic 35.0%
TCTGGTACAACACTATTCAA+AGG + chr3_3:35610398-35610417 None:intergenic 35.0%
AATGGACAGTAGAAGAAGAT+CGG - chr3_3:35610546-35610565 Msa0450240:CDS 35.0%
ATATGTGTGCATGCAAAAAC+AGG - chr3_3:35610705-35610724 Msa0450240:CDS 35.0%
GAGAACATGGTTTGAGAAAA+TGG - chr3_3:35610747-35610766 Msa0450240:CDS 35.0%
! CATTGTTTTCCTATTCTACC+AGG + chr3_3:35610794-35610813 None:intergenic 35.0%
! TCATCTAAAGCCTGACATTA+AGG - chr3_3:35610832-35610851 Msa0450240:intron 35.0%
TAAATCTTCGTTGAAGTTGG+TGG - chr3_3:35610974-35610993 Msa0450240:intron 35.0%
ATCAAAGCACATGAAGAGAT+AGG - chr3_3:35611358-35611377 Msa0450240:CDS 35.0%
! ATTGAGTTTTCAGTTCTTCC+TGG + chr3_3:35611415-35611434 None:intergenic 35.0%
TTCTCTTTGTTGCATTCCAA+TGG + chr3_3:35611444-35611463 None:intergenic 35.0%
! CTTTGATCTACCCTTTCTTT+TGG + chr3_3:35611476-35611495 None:intergenic 35.0%
!!! TTGTGATTTTGATGATGTCC+CGG - chr3_3:35611684-35611703 Msa0450240:CDS 35.0%
TCTCATCGAAAGAAAAATCC+GGG + chr3_3:35611705-35611724 None:intergenic 35.0%
TGCTGAAGCTGATCAAATTA+TGG - chr3_3:35611777-35611796 Msa0450240:CDS 35.0%
GAAGCTGATCAAATTATGGA+AGG - chr3_3:35611781-35611800 Msa0450240:CDS 35.0%
AGTTGAAGTTAAGAAGGAGA+TGG - chr3_3:35611864-35611883 Msa0450240:CDS 35.0%
! TAAGAAGGAGATGGATTTGA+TGG - chr3_3:35611873-35611892 Msa0450240:CDS 35.0%
!!! TTGATGGAGATGGTTTTTTC+AGG - chr3_3:35611889-35611908 Msa0450240:CDS 35.0%
TTGGAGAAAATTCAGAAGGA+TGG - chr3_3:35612018-35612037 Msa0450240:CDS 35.0%
AAAATTCAGAAGGATGGAAC+TGG - chr3_3:35612024-35612043 Msa0450240:CDS 35.0%
AAATTCAGAAGGATGGAACT+GGG - chr3_3:35612025-35612044 Msa0450240:CDS 35.0%
!! TTATGAGAATCCTTTTGGAG+TGG - chr3_3:35610061-35610080 Msa0450240:CDS 35.0%
TGAAAGAATCCATGAGATGA+AGG + chr3_3:35610089-35610108 None:intergenic 35.0%
!!! ACCTTTTTCAATCCTGTTTC+CGG - chr3_3:35610149-35610168 Msa0450240:intron 35.0%
TGAACAACAACCTTTCTCAA+AGG - chr3_3:35610303-35610322 Msa0450240:CDS 35.0%
TACAACACTATTCAAAGGCT+TGG + chr3_3:35610393-35610412 None:intergenic 35.0%
TCTGGTACAACACTATTCAA+AGG + chr3_3:35610398-35610417 None:intergenic 35.0%
AATGGACAGTAGAAGAAGAT+CGG - chr3_3:35610546-35610565 Msa0450240:CDS 35.0%
ATATGTGTGCATGCAAAAAC+AGG - chr3_3:35610705-35610724 Msa0450240:CDS 35.0%
GAGAACATGGTTTGAGAAAA+TGG - chr3_3:35610747-35610766 Msa0450240:CDS 35.0%
! CATTGTTTTCCTATTCTACC+AGG + chr3_3:35610794-35610813 None:intergenic 35.0%
! TCATCTAAAGCCTGACATTA+AGG - chr3_3:35610832-35610851 Msa0450240:intron 35.0%
TAAATCTTCGTTGAAGTTGG+TGG - chr3_3:35610974-35610993 Msa0450240:intron 35.0%
ATCAAAGCACATGAAGAGAT+AGG - chr3_3:35611358-35611377 Msa0450240:CDS 35.0%
! ATTGAGTTTTCAGTTCTTCC+TGG + chr3_3:35611415-35611434 None:intergenic 35.0%
TTCTCTTTGTTGCATTCCAA+TGG + chr3_3:35611444-35611463 None:intergenic 35.0%
! CTTTGATCTACCCTTTCTTT+TGG + chr3_3:35611476-35611495 None:intergenic 35.0%
!!! TTGTGATTTTGATGATGTCC+CGG - chr3_3:35611684-35611703 Msa0450240:CDS 35.0%
TCTCATCGAAAGAAAAATCC+GGG + chr3_3:35611705-35611724 None:intergenic 35.0%
TGCTGAAGCTGATCAAATTA+TGG - chr3_3:35611777-35611796 Msa0450240:CDS 35.0%
GAAGCTGATCAAATTATGGA+AGG - chr3_3:35611781-35611800 Msa0450240:CDS 35.0%
AGTTGAAGTTAAGAAGGAGA+TGG - chr3_3:35611864-35611883 Msa0450240:CDS 35.0%
! TAAGAAGGAGATGGATTTGA+TGG - chr3_3:35611873-35611892 Msa0450240:CDS 35.0%
!!! TTGATGGAGATGGTTTTTTC+AGG - chr3_3:35611889-35611908 Msa0450240:CDS 35.0%
TTGGAGAAAATTCAGAAGGA+TGG - chr3_3:35612018-35612037 Msa0450240:CDS 35.0%
AAAATTCAGAAGGATGGAAC+TGG - chr3_3:35612024-35612043 Msa0450240:CDS 35.0%
AAATTCAGAAGGATGGAACT+GGG - chr3_3:35612025-35612044 Msa0450240:CDS 35.0%
!!! CCTTTTTCAATCCTGTTTCC+GGG - chr3_3:35610150-35610169 Msa0450240:intron 40.0%
!!! CTTTTTCAATCCTGTTTCCG+GGG - chr3_3:35610151-35610170 Msa0450240:intron 40.0%
! AAATTTTTGACCCCGGAAAC+AGG + chr3_3:35610164-35610183 None:intergenic 40.0%
GATATGCATGAGACTTCATC+TGG + chr3_3:35610416-35610435 None:intergenic 40.0%
AACTTTCTCAGGCTTTCTAG+AGG + chr3_3:35610498-35610517 None:intergenic 40.0%
TGCATGCAAAAACAGGTTGT+TGG - chr3_3:35610712-35610731 Msa0450240:CDS 40.0%
CATATTGCTGAGAATTTGCC+TGG - chr3_3:35610773-35610792 Msa0450240:CDS 40.0%
GAGAATTTGCCTGGTAGAAT+AGG - chr3_3:35610782-35610801 Msa0450240:CDS 40.0%
GAAAACAATGCAGAGAGAGA+TGG - chr3_3:35610804-35610823 Msa0450240:CDS 40.0%
!! TAGCACATTAGCACTGACTT+AGG - chr3_3:35610903-35610922 Msa0450240:intron 40.0%
! ATGTTGTGCCTTATTGCAGA+AGG - chr3_3:35611303-35611322 Msa0450240:intron 40.0%
CCATATGTCCTTCTGCAATA+AGG + chr3_3:35611314-35611333 None:intergenic 40.0%
CCTTATTGCAGAAGGACATA+TGG - chr3_3:35611311-35611330 Msa0450240:intron 40.0%
AGAGATAGGAAACAAATGGG+CGG - chr3_3:35611372-35611391 Msa0450240:CDS 40.0%
GAGATAGCTAAAAGGTTACC+AGG - chr3_3:35611394-35611413 Msa0450240:CDS 40.0%
! GGTAGATCAAAGTACCCTAA+AGG - chr3_3:35611484-35611503 Msa0450240:intron 40.0%
GGATAATGTTGTGCATCTGT+TGG + chr3_3:35611608-35611627 None:intergenic 40.0%
!! TTCAGTTTGTTGAGACTGAG+AGG + chr3_3:35611629-35611648 None:intergenic 40.0%
GGTACCAAACACTGATCATT+AGG + chr3_3:35611661-35611680 None:intergenic 40.0%
GCTTGGAGTTGAAGTTAAGA+AGG - chr3_3:35611858-35611877 Msa0450240:CDS 40.0%
!!! CCTTTTTCAATCCTGTTTCC+GGG - chr3_3:35610150-35610169 Msa0450240:intron 40.0%
!!! CTTTTTCAATCCTGTTTCCG+GGG - chr3_3:35610151-35610170 Msa0450240:intron 40.0%
! AAATTTTTGACCCCGGAAAC+AGG + chr3_3:35610164-35610183 None:intergenic 40.0%
GATATGCATGAGACTTCATC+TGG + chr3_3:35610416-35610435 None:intergenic 40.0%
AACTTTCTCAGGCTTTCTAG+AGG + chr3_3:35610498-35610517 None:intergenic 40.0%
TGCATGCAAAAACAGGTTGT+TGG - chr3_3:35610712-35610731 Msa0450240:CDS 40.0%
CATATTGCTGAGAATTTGCC+TGG - chr3_3:35610773-35610792 Msa0450240:CDS 40.0%
GAGAATTTGCCTGGTAGAAT+AGG - chr3_3:35610782-35610801 Msa0450240:CDS 40.0%
GAAAACAATGCAGAGAGAGA+TGG - chr3_3:35610804-35610823 Msa0450240:CDS 40.0%
!! TAGCACATTAGCACTGACTT+AGG - chr3_3:35610903-35610922 Msa0450240:intron 40.0%
! ATGTTGTGCCTTATTGCAGA+AGG - chr3_3:35611303-35611322 Msa0450240:intron 40.0%
CCATATGTCCTTCTGCAATA+AGG + chr3_3:35611314-35611333 None:intergenic 40.0%
CCTTATTGCAGAAGGACATA+TGG - chr3_3:35611311-35611330 Msa0450240:intron 40.0%
AGAGATAGGAAACAAATGGG+CGG - chr3_3:35611372-35611391 Msa0450240:CDS 40.0%
GAGATAGCTAAAAGGTTACC+AGG - chr3_3:35611394-35611413 Msa0450240:CDS 40.0%
! GGTAGATCAAAGTACCCTAA+AGG - chr3_3:35611484-35611503 Msa0450240:intron 40.0%
GGATAATGTTGTGCATCTGT+TGG + chr3_3:35611608-35611627 None:intergenic 40.0%
!! TTCAGTTTGTTGAGACTGAG+AGG + chr3_3:35611629-35611648 None:intergenic 40.0%
GGTACCAAACACTGATCATT+AGG + chr3_3:35611661-35611680 None:intergenic 40.0%
GCTTGGAGTTGAAGTTAAGA+AGG - chr3_3:35611858-35611877 Msa0450240:CDS 40.0%
GATGAAGGAACCACTCCAAA+AGG + chr3_3:35610074-35610093 None:intergenic 45.0%
CCCGGAAACAGGATTGAAAA+AGG + chr3_3:35610153-35610172 None:intergenic 45.0%
! TCAGGCTTTCTAGAGGCATA+AGG + chr3_3:35610491-35610510 None:intergenic 45.0%
!! AAACAGGTTGTTGGTTCAGC+TGG - chr3_3:35610721-35610740 Msa0450240:CDS 45.0%
AATGGGCGGAGATAGCTAAA+AGG - chr3_3:35611386-35611405 Msa0450240:CDS 45.0%
! GGAGATGGATTTGATGGAGA+TGG - chr3_3:35611879-35611898 Msa0450240:CDS 45.0%
GCACAAAAATGCAGTGAGAG+TGG - chr3_3:35612090-35612109 Msa0450240:CDS 45.0%
GATGAAGGAACCACTCCAAA+AGG + chr3_3:35610074-35610093 None:intergenic 45.0%
CCCGGAAACAGGATTGAAAA+AGG + chr3_3:35610153-35610172 None:intergenic 45.0%
! TCAGGCTTTCTAGAGGCATA+AGG + chr3_3:35610491-35610510 None:intergenic 45.0%
!! AAACAGGTTGTTGGTTCAGC+TGG - chr3_3:35610721-35610740 Msa0450240:CDS 45.0%
AATGGGCGGAGATAGCTAAA+AGG - chr3_3:35611386-35611405 Msa0450240:CDS 45.0%
! GGAGATGGATTTGATGGAGA+TGG - chr3_3:35611879-35611898 Msa0450240:CDS 45.0%
GCACAAAAATGCAGTGAGAG+TGG - chr3_3:35612090-35612109 Msa0450240:CDS 45.0%
GGAGTGGTTCCTTCATCTCA+TGG - chr3_3:35610077-35610096 Msa0450240:intron 50.0%
!! AGGTTGTTGGTTCAGCTGGT+TGG - chr3_3:35610725-35610744 Msa0450240:CDS 50.0%
GTTCAGCTGGTTGGAGAACA+TGG - chr3_3:35610734-35610753 Msa0450240:CDS 50.0%
GCAGAAGGACATATGGAGTG+AGG - chr3_3:35611318-35611337 Msa0450240:CDS 50.0%
GGACATATGGAGTGAGGAAG+AGG - chr3_3:35611324-35611343 Msa0450240:CDS 50.0%
! CTTTCGGAGGGTTTTCGTCT+AGG + chr3_3:35611543-35611562 None:intergenic 50.0%
GGAGTGGTTCCTTCATCTCA+TGG - chr3_3:35610077-35610096 Msa0450240:intron 50.0%
!! AGGTTGTTGGTTCAGCTGGT+TGG - chr3_3:35610725-35610744 Msa0450240:CDS 50.0%
GTTCAGCTGGTTGGAGAACA+TGG - chr3_3:35610734-35610753 Msa0450240:CDS 50.0%
GCAGAAGGACATATGGAGTG+AGG - chr3_3:35611318-35611337 Msa0450240:CDS 50.0%
GGACATATGGAGTGAGGAAG+AGG - chr3_3:35611324-35611343 Msa0450240:CDS 50.0%
! CTTTCGGAGGGTTTTCGTCT+AGG + chr3_3:35611543-35611562 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 35610002 35612167 35610002 ID=Msa0450240;Name=Msa0450240
chr3_3 mRNA 35610002 35612167 35610002 ID=Msa0450240-mRNA-1;Parent=Msa0450240;Name=Msa0450240-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.75|1|1|4|0|470
chr3_3 exon 35611602 35612167 35611602 ID=Msa0450240-mRNA-1:exon:6425;Parent=Msa0450240-mRNA-1
chr3_3 exon 35611316 35611442 35611316 ID=Msa0450240-mRNA-1:exon:6424;Parent=Msa0450240-mRNA-1
chr3_3 exon 35610208 35610847 35610208 ID=Msa0450240-mRNA-1:exon:6423;Parent=Msa0450240-mRNA-1
chr3_3 exon 35610002 35610081 35610002 ID=Msa0450240-mRNA-1:exon:6422;Parent=Msa0450240-mRNA-1
chr3_3 CDS 35611602 35612167 35611602 ID=Msa0450240-mRNA-1:cds;Parent=Msa0450240-mRNA-1
chr3_3 CDS 35611316 35611442 35611316 ID=Msa0450240-mRNA-1:cds;Parent=Msa0450240-mRNA-1
chr3_3 CDS 35610208 35610847 35610208 ID=Msa0450240-mRNA-1:cds;Parent=Msa0450240-mRNA-1
chr3_3 CDS 35610002 35610081 35610002 ID=Msa0450240-mRNA-1:cds;Parent=Msa0450240-mRNA-1
Gene Sequence

>Msa0450240

ATGGATTTTCAGACAAATTTTTTACAAGAAAATTACCACTTGAAACCCAACATAAAAAATTATGAGAATCCTTTTGGAGTGGTTCCTTCATCTCATGGATTCTTTCAAGATTTTAATCACATTGATAAATTTAATGTGAATAGTAGTACCTTTTTCAATCCTGTTTCCGGGGTCAAAAATTTTGATCTTAGTGATAATTTTACCTATGATGTTCATCATAATTTCAAGTCTTTTACAGAAAACAATAGTGGTAATGGTCATGCTTATGTTATGGATAATTTCTTATATGGAGGTTATGGGTTGAACAACAACCTTTCTCAAAGGAATAATCAAATGGAAATGATGGTTACAAACCAAAATTATTTTCCATTTAATATTTCTCAAGAAACCAAGCCTTTGAATAGTGTTGTACCAGATGAAGTCTCATGCATATCCTCAGTGAATTATTACAAAAGAGTTGGCATGAACAGAAATAATAAGGCATATCCTTATGCCTCTAGAAAGCCTGAGAAAGTTAAAAAGAAGATCAACTTTATAAAAGGGCAATGGACAGTAGAAGAAGATCGGTTGTTGGTTCAGCTGGTTGGAGAACATGGTTTGAGAAAATGGTCTCATATTGCTGAGAATTTGCCTGGTAGAATAGGAAAACAATGCAGAGAGAGATGGCATAATCATCTAAAGCCTGACATTAAGAAGGACATATGGAGTGAGGAAGAGGACAACATATTGATCAAAGCACATGAAGAGATAGGAAACAAATGGGCGGAGATAGCTAAAAGGTTACCAGGAAGAACTGAAAACTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGACAATACTCCAAAAGAAAGGGTAGATCAAAGTACCCTAAAGGAACTCTTCTACAAAAATATATCAAGAGCTTAAACCTAGACGAAAACCCTCCGAAAGATTATAGAAGAAAACCTTCAGCTAATGCTATGAAAAACAAAACCAACAGATGCACAACATTATCCTCTCAGTCTCAACAAACTGAACAATTTTTTCCTAATGATCAGTGTTTGGTACCAACTTGTGATTTTGATGATGTCCCGGATTTTTCTTTCGATGAGAATTTGTTTCAAAATGGGTGTAGTATTGATTCTCTACTAGATGATATGCAATGTGCTGAAGCTGATCAAATTATGGAAGGAAAAAAACATTTTGATGTTGAGACAGAAATGCCACTAGATATTATGGAATCTATGCTTGGAGTTGAAGTTAAGAAGGAGATGGATTTGATGGAGATGGTTTTTTCAGGTCAACGAAAATTTTCAAGTGACTCATATTTTGGTAATGACATCAACATTGAAGCACAAAAATGCAGTGAGAGTGGCTATAATCTAGAAAAGAAGGCAAAAAGTAGCACAGCAACAAACAATTATCAATGA
Protein sequence

>Msa0450240

MDFQTNFLQENYHLKPNIKNYENPFGVVPSSHGFFQDFNHIDKFNVNSSTFFNPVSGVKNFDLSDNFTYDVHHNFKSFTENNSGNGHAYVMDNFLYGGYGLNNNLSQRNNQMEMMVTNQNYFPFNISQETKPLNSVVPDEVSCISSVNYYKRVGMNRNNKAYPYASRKPEKVKKKINFIKGQWTVEEDRLLVQLVGEHGLRKWSHIAENLPGRIGKQCRERWHNHLKPDIKKDIWSEEEDNILIKAHEEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKGRSKYPKGTLLQKYIKSLNLDENPPKDYRRKPSANAMKNKTNRCTTLSSQSQQTEQFFPNDQCLVPTCDFDDVPDFSFDENLFQNGCSIDSLLDDMQCAEADQIMEGKKHFDVETEMPLDIMESMLGVEVKKEMDLMEMVFSGQRKFSSDSYFGNDINIEAQKCSESGYNLEKKAKSSTATNNYQ*