Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450910 | KEH25323.1 | 86.957 | 69 | 9 | 0 | 1 | 69 | 62 | 130 | 4.12e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450910 | A0A072U878 | 86.957 | 69 | 9 | 0 | 1 | 69 | 62 | 130 | 1.97e-35 | 127 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0450910 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450910 | MtrunA17_Chr3g0082121 | 58.140 | 86 | 32 | 1 | 1 | 82 | 47 | 132 | 1.45e-24 | 95.9 |
| Msa0450910 | MtrunA17_Chr5g0401121 | 60.870 | 69 | 27 | 0 | 1 | 69 | 60 | 128 | 3.31e-20 | 79.7 |
| Msa0450910 | MtrunA17_Chr6g0458391 | 45.588 | 68 | 37 | 0 | 1 | 68 | 229 | 296 | 3.20e-16 | 72.4 |
| Msa0450910 | MtrunA17_Chr1g0149131 | 86.207 | 29 | 4 | 0 | 71 | 99 | 61 | 89 | 3.83e-12 | 57.8 |
| Msa0450910 | MtrunA17_Chr1g0203721 | 38.806 | 67 | 41 | 0 | 3 | 69 | 69 | 135 | 5.54e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCTCTAGGCTCCCCTTT+TGG | 0.322934 | 3_3:+37401660 | None:intergenic |
| GCAAATAAAAGCAGCGTAGA+TGG | 0.362217 | 3_3:-37401750 | Msa0450910:CDS |
| ACTTGTTGAGCATAATATAT+TGG | 0.389708 | 3_3:-37400796 | Msa0450910:CDS |
| AATGAGTACAGTAAAAGAAT+AGG | 0.450823 | 3_3:-37401795 | Msa0450910:CDS |
| GATAAAAGACGTCAACCAAA+AGG | 0.461894 | 3_3:-37401675 | Msa0450910:CDS |
| TGCATAAATCTACATGAAGA+TGG | 0.470430 | 3_3:-37400849 | Msa0450910:CDS |
| CTCGTTCTAATTTCTGCTCT+AGG | 0.476581 | 3_3:+37401648 | None:intergenic |
| GCATAAATCTACATGAAGAT+GGG | 0.505040 | 3_3:-37400848 | Msa0450910:CDS |
| ATAAAAGACGTCAACCAAAA+GGG | 0.517756 | 3_3:-37401674 | Msa0450910:CDS |
| GTTGAGCATAATATATTGGA+AGG | 0.525933 | 3_3:-37400792 | Msa0450910:CDS |
| CATAAATCTACATGAAGATG+GGG | 0.584470 | 3_3:-37400847 | Msa0450910:CDS |
| ATAATATATTGGAAGGGTCG+TGG | 0.588775 | 3_3:-37400785 | None:intergenic |
| AGATTGACATGCTTCAAAGA+GGG | 0.606059 | 3_3:-37401711 | Msa0450910:CDS |
| TTGAGCATAATATATTGGAA+GGG | 0.622690 | 3_3:-37400791 | Msa0450910:CDS |
| TGCTTCAAAGAGGGTGTACG+AGG | 0.626130 | 3_3:-37401702 | Msa0450910:CDS |
| TAAAAGACGTCAACCAAAAG+GGG | 0.631119 | 3_3:-37401673 | Msa0450910:CDS |
| AAGATTGACATGCTTCAAAG+AGG | 0.631174 | 3_3:-37401712 | Msa0450910:CDS |
| AATGAAGATTGATTCTCAAG+CGG | 0.660742 | 3_3:-37401835 | Msa0450910:CDS |
| ATAAATCTACATGAAGATGG+GGG | 0.732388 | 3_3:-37400846 | Msa0450910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCAAATAACAAATATATTT+TGG | - | chr3_3:37401382-37401401 | Msa0450910:intron | 15.0% |
| !!! | GCAAATAACAAATATATTTT+GGG | - | chr3_3:37401383-37401402 | Msa0450910:intron | 15.0% |
| !!! | AGCAAATAACAAATATATTT+TGG | - | chr3_3:37401382-37401401 | Msa0450910:intron | 15.0% |
| !!! | GCAAATAACAAATATATTTT+GGG | - | chr3_3:37401383-37401402 | Msa0450910:intron | 15.0% |
| !!! | ATATATTCTTGCAAATCTTT+TGG | + | chr3_3:37401181-37401200 | None:intergenic | 20.0% |
| !!! | AATAACAAATATATTTTGGG+TGG | - | chr3_3:37401386-37401405 | Msa0450910:intron | 20.0% |
| !! | CACAAATGATAAATGATTAT+GGG | - | chr3_3:37401412-37401431 | Msa0450910:intron | 20.0% |
| !!! | ATAAATGATTATGGGTATTT+TGG | - | chr3_3:37401420-37401439 | Msa0450910:intron | 20.0% |
| !!! | ATATATTCTTGCAAATCTTT+TGG | + | chr3_3:37401181-37401200 | None:intergenic | 20.0% |
| !!! | AATAACAAATATATTTTGGG+TGG | - | chr3_3:37401386-37401405 | Msa0450910:intron | 20.0% |
| !! | CACAAATGATAAATGATTAT+GGG | - | chr3_3:37401412-37401431 | Msa0450910:intron | 20.0% |
| !!! | ATAAATGATTATGGGTATTT+TGG | - | chr3_3:37401420-37401439 | Msa0450910:intron | 20.0% |
| ! | AATGAGTACAGTAAAAGAAT+AGG | - | chr3_3:37400827-37400846 | Msa0450910:CDS | 25.0% |
| !! | GTTCTTTTATGACTTTCAAA+TGG | - | chr3_3:37401350-37401369 | Msa0450910:intron | 25.0% |
| ! | GCACAAATGATAAATGATTA+TGG | - | chr3_3:37401411-37401430 | Msa0450910:intron | 25.0% |
| !! | GTTATTTGAAACATTTCTCA+AGG | - | chr3_3:37401587-37401606 | Msa0450910:intron | 25.0% |
| ! | ATATAAGACATAACGCTTTA+CGG | - | chr3_3:37401696-37401715 | Msa0450910:CDS | 25.0% |
| !! | ATTGTGAACTCTTTTGATAT+AGG | + | chr3_3:37401733-37401752 | None:intergenic | 25.0% |
| !! | ACTTGTTGAGCATAATATAT+TGG | - | chr3_3:37401826-37401845 | Msa0450910:CDS | 25.0% |
| ! | TTGAGCATAATATATTGGAA+GGG | - | chr3_3:37401831-37401850 | Msa0450910:CDS | 25.0% |
| ! | AATGAGTACAGTAAAAGAAT+AGG | - | chr3_3:37400827-37400846 | Msa0450910:CDS | 25.0% |
| !! | GTTCTTTTATGACTTTCAAA+TGG | - | chr3_3:37401350-37401369 | Msa0450910:intron | 25.0% |
| ! | GCACAAATGATAAATGATTA+TGG | - | chr3_3:37401411-37401430 | Msa0450910:intron | 25.0% |
| !! | GTTATTTGAAACATTTCTCA+AGG | - | chr3_3:37401587-37401606 | Msa0450910:intron | 25.0% |
| ! | ATATAAGACATAACGCTTTA+CGG | - | chr3_3:37401696-37401715 | Msa0450910:CDS | 25.0% |
| !! | ATTGTGAACTCTTTTGATAT+AGG | + | chr3_3:37401733-37401752 | None:intergenic | 25.0% |
| !! | ACTTGTTGAGCATAATATAT+TGG | - | chr3_3:37401826-37401845 | Msa0450910:CDS | 25.0% |
| ! | TTGAGCATAATATATTGGAA+GGG | - | chr3_3:37401831-37401850 | Msa0450910:CDS | 25.0% |
| ATAAAAGACGTCAACCAAAA+GGG | - | chr3_3:37400948-37400967 | Msa0450910:intron | 30.0% | |
| AGAAATTAGAACGAGATGTT+CGG | - | chr3_3:37400982-37401001 | Msa0450910:intron | 30.0% | |
| ATATATATATCCAAGCAAGC+TGG | - | chr3_3:37401195-37401214 | Msa0450910:intron | 30.0% | |
| TGAAAGTCATAAAAGAACGA+GGG | + | chr3_3:37401348-37401367 | None:intergenic | 30.0% | |
| TTGAAAGTCATAAAAGAACG+AGG | + | chr3_3:37401349-37401368 | None:intergenic | 30.0% | |
| ACCACATACAAGACAAATAA+GGG | - | chr3_3:37401462-37401481 | Msa0450910:intron | 30.0% | |
| ACAAGACAAATAAGGGTTAT+CGG | - | chr3_3:37401469-37401488 | Msa0450910:intron | 30.0% | |
| !!! | ACATGCAAACAGTCATTTTT+GGG | - | chr3_3:37401523-37401542 | Msa0450910:intron | 30.0% |
| TCAAATAACCACTTGAAAGA+CGG | + | chr3_3:37401576-37401595 | None:intergenic | 30.0% | |
| AAAGCCGAAAACAATTATGA+CGG | - | chr3_3:37401623-37401642 | Msa0450910:intron | 30.0% | |
| ! | TGATCCGTCATAATTGTTTT+CGG | + | chr3_3:37401630-37401649 | None:intergenic | 30.0% |
| AAAGAGTTCACAATTCTGTT+TGG | - | chr3_3:37401739-37401758 | Msa0450910:CDS | 30.0% | |
| TGCATAAATCTACATGAAGA+TGG | - | chr3_3:37401773-37401792 | Msa0450910:CDS | 30.0% | |
| GCATAAATCTACATGAAGAT+GGG | - | chr3_3:37401774-37401793 | Msa0450910:CDS | 30.0% | |
| CATAAATCTACATGAAGATG+GGG | - | chr3_3:37401775-37401794 | Msa0450910:CDS | 30.0% | |
| ATAAATCTACATGAAGATGG+GGG | - | chr3_3:37401776-37401795 | Msa0450910:CDS | 30.0% | |
| GTTGAGCATAATATATTGGA+AGG | - | chr3_3:37401830-37401849 | Msa0450910:CDS | 30.0% | |
| ATAAAAGACGTCAACCAAAA+GGG | - | chr3_3:37400948-37400967 | Msa0450910:intron | 30.0% | |
| AGAAATTAGAACGAGATGTT+CGG | - | chr3_3:37400982-37401001 | Msa0450910:intron | 30.0% | |
| ATATATATATCCAAGCAAGC+TGG | - | chr3_3:37401195-37401214 | Msa0450910:intron | 30.0% | |
| TGAAAGTCATAAAAGAACGA+GGG | + | chr3_3:37401348-37401367 | None:intergenic | 30.0% | |
| TTGAAAGTCATAAAAGAACG+AGG | + | chr3_3:37401349-37401368 | None:intergenic | 30.0% | |
| ACCACATACAAGACAAATAA+GGG | - | chr3_3:37401462-37401481 | Msa0450910:intron | 30.0% | |
| ACAAGACAAATAAGGGTTAT+CGG | - | chr3_3:37401469-37401488 | Msa0450910:intron | 30.0% | |
| !!! | ACATGCAAACAGTCATTTTT+GGG | - | chr3_3:37401523-37401542 | Msa0450910:intron | 30.0% |
| TCAAATAACCACTTGAAAGA+CGG | + | chr3_3:37401576-37401595 | None:intergenic | 30.0% | |
| AAAGCCGAAAACAATTATGA+CGG | - | chr3_3:37401623-37401642 | Msa0450910:intron | 30.0% | |
| ! | TGATCCGTCATAATTGTTTT+CGG | + | chr3_3:37401630-37401649 | None:intergenic | 30.0% |
| AAAGAGTTCACAATTCTGTT+TGG | - | chr3_3:37401739-37401758 | Msa0450910:CDS | 30.0% | |
| TGCATAAATCTACATGAAGA+TGG | - | chr3_3:37401773-37401792 | Msa0450910:CDS | 30.0% | |
| GCATAAATCTACATGAAGAT+GGG | - | chr3_3:37401774-37401793 | Msa0450910:CDS | 30.0% | |
| CATAAATCTACATGAAGATG+GGG | - | chr3_3:37401775-37401794 | Msa0450910:CDS | 30.0% | |
| ATAAATCTACATGAAGATGG+GGG | - | chr3_3:37401776-37401795 | Msa0450910:CDS | 30.0% | |
| GTTGAGCATAATATATTGGA+AGG | - | chr3_3:37401830-37401849 | Msa0450910:CDS | 30.0% | |
| AAGATTGACATGCTTCAAAG+AGG | - | chr3_3:37400910-37400929 | Msa0450910:intron | 35.0% | |
| AGATTGACATGCTTCAAAGA+GGG | - | chr3_3:37400911-37400930 | Msa0450910:intron | 35.0% | |
| GATAAAAGACGTCAACCAAA+AGG | - | chr3_3:37400947-37400966 | Msa0450910:intron | 35.0% | |
| TAAAAGACGTCAACCAAAAG+GGG | - | chr3_3:37400949-37400968 | Msa0450910:intron | 35.0% | |
| ! | GTATGGTTATTTCACTCGAT+CGG | - | chr3_3:37401008-37401027 | Msa0450910:intron | 35.0% |
| ACAAGCATCACAAATTGTCT+TGG | - | chr3_3:37401135-37401154 | Msa0450910:intron | 35.0% | |
| CAAGCATCACAAATTGTCTT+GGG | - | chr3_3:37401136-37401155 | Msa0450910:intron | 35.0% | |
| TGGTTTCAAGGTAATTCGTA+AGG | + | chr3_3:37401254-37401273 | None:intergenic | 35.0% | |
| CGAATTACCTTGAAACCAAA+AGG | - | chr3_3:37401256-37401275 | Msa0450910:intron | 35.0% | |
| TCACTAAAGTATGGTGAAGT+TGG | - | chr3_3:37401285-37401304 | Msa0450910:intron | 35.0% | |
| CACCACATACAAGACAAATA+AGG | - | chr3_3:37401461-37401480 | Msa0450910:intron | 35.0% | |
| ! | ACCCTTATTTGTCTTGTATG+TGG | + | chr3_3:37401466-37401485 | None:intergenic | 35.0% |
| !! | CACATGCAAACAGTCATTTT+TGG | - | chr3_3:37401522-37401541 | Msa0450910:intron | 35.0% |
| !!! | CATGCAAACAGTCATTTTTG+GGG | - | chr3_3:37401524-37401543 | Msa0450910:intron | 35.0% |
| CAAATAACCACTTGAAAGAC+GGG | + | chr3_3:37401575-37401594 | None:intergenic | 35.0% | |
| TGAAACATTTCTCAAGGCAA+TGG | - | chr3_3:37401593-37401612 | Msa0450910:intron | 35.0% | |
| GAAACATTTCTCAAGGCAAT+GGG | - | chr3_3:37401594-37401613 | Msa0450910:intron | 35.0% | |
| GATGGCTAAGAAACATTTCA+TGG | - | chr3_3:37401659-37401678 | Msa0450910:CDS | 35.0% | |
| ! | GTGAACTCTTTTGATATAGG+TGG | + | chr3_3:37401730-37401749 | None:intergenic | 35.0% |
| AAGATTGACATGCTTCAAAG+AGG | - | chr3_3:37400910-37400929 | Msa0450910:intron | 35.0% | |
| AGATTGACATGCTTCAAAGA+GGG | - | chr3_3:37400911-37400930 | Msa0450910:intron | 35.0% | |
| GATAAAAGACGTCAACCAAA+AGG | - | chr3_3:37400947-37400966 | Msa0450910:intron | 35.0% | |
| TAAAAGACGTCAACCAAAAG+GGG | - | chr3_3:37400949-37400968 | Msa0450910:intron | 35.0% | |
| ! | GTATGGTTATTTCACTCGAT+CGG | - | chr3_3:37401008-37401027 | Msa0450910:intron | 35.0% |
| ACAAGCATCACAAATTGTCT+TGG | - | chr3_3:37401135-37401154 | Msa0450910:intron | 35.0% | |
| CAAGCATCACAAATTGTCTT+GGG | - | chr3_3:37401136-37401155 | Msa0450910:intron | 35.0% | |
| TGGTTTCAAGGTAATTCGTA+AGG | + | chr3_3:37401254-37401273 | None:intergenic | 35.0% | |
| CGAATTACCTTGAAACCAAA+AGG | - | chr3_3:37401256-37401275 | Msa0450910:intron | 35.0% | |
| TCACTAAAGTATGGTGAAGT+TGG | - | chr3_3:37401285-37401304 | Msa0450910:intron | 35.0% | |
| CACCACATACAAGACAAATA+AGG | - | chr3_3:37401461-37401480 | Msa0450910:intron | 35.0% | |
| ! | ACCCTTATTTGTCTTGTATG+TGG | + | chr3_3:37401466-37401485 | None:intergenic | 35.0% |
| !! | CACATGCAAACAGTCATTTT+TGG | - | chr3_3:37401522-37401541 | Msa0450910:intron | 35.0% |
| !!! | CATGCAAACAGTCATTTTTG+GGG | - | chr3_3:37401524-37401543 | Msa0450910:intron | 35.0% |
| CAAATAACCACTTGAAAGAC+GGG | + | chr3_3:37401575-37401594 | None:intergenic | 35.0% | |
| TGAAACATTTCTCAAGGCAA+TGG | - | chr3_3:37401593-37401612 | Msa0450910:intron | 35.0% | |
| GAAACATTTCTCAAGGCAAT+GGG | - | chr3_3:37401594-37401613 | Msa0450910:intron | 35.0% | |
| GATGGCTAAGAAACATTTCA+TGG | - | chr3_3:37401659-37401678 | Msa0450910:CDS | 35.0% | |
| ! | GTGAACTCTTTTGATATAGG+TGG | + | chr3_3:37401730-37401749 | None:intergenic | 35.0% |
| GCAAATAAAAGCAGCGTAGA+TGG | - | chr3_3:37400872-37400891 | Msa0450910:intron | 40.0% | |
| CTCGTTCTAATTTCTGCTCT+AGG | + | chr3_3:37400977-37400996 | None:intergenic | 40.0% | |
| !! | GAACATGCTCAGGTTGAATT+TGG | + | chr3_3:37401081-37401100 | None:intergenic | 40.0% |
| CGAATCATATGAACATGCTC+AGG | + | chr3_3:37401091-37401110 | None:intergenic | 40.0% | |
| TATATATCCAAGCAAGCTGG+TGG | - | chr3_3:37401198-37401217 | Msa0450910:intron | 40.0% | |
| GCTGGTGGAATAAAGACAAT+TGG | - | chr3_3:37401213-37401232 | Msa0450910:intron | 40.0% | |
| !!! | ACTGCTTCCTTTTGGTTTCA+AGG | + | chr3_3:37401266-37401285 | None:intergenic | 40.0% |
| ! | CTTTAGTGACTGCTTCCTTT+TGG | + | chr3_3:37401274-37401293 | None:intergenic | 40.0% |
| AGGAAGCAGTCACTAAAGTA+TGG | - | chr3_3:37401276-37401295 | Msa0450910:intron | 40.0% | |
| AAACAATCCCGTCTTTCAAG+TGG | - | chr3_3:37401565-37401584 | Msa0450910:intron | 40.0% | |
| ! | CATTTCATGGATTGTGCACT+TGG | - | chr3_3:37401672-37401691 | Msa0450910:CDS | 40.0% |
| ! | GGGGTGAATTTTTGAATGCT+TGG | - | chr3_3:37401795-37401814 | Msa0450910:CDS | 40.0% |
| GCAAATAAAAGCAGCGTAGA+TGG | - | chr3_3:37400872-37400891 | Msa0450910:intron | 40.0% | |
| CTCGTTCTAATTTCTGCTCT+AGG | + | chr3_3:37400977-37400996 | None:intergenic | 40.0% | |
| !! | GAACATGCTCAGGTTGAATT+TGG | + | chr3_3:37401081-37401100 | None:intergenic | 40.0% |
| CGAATCATATGAACATGCTC+AGG | + | chr3_3:37401091-37401110 | None:intergenic | 40.0% | |
| TATATATCCAAGCAAGCTGG+TGG | - | chr3_3:37401198-37401217 | Msa0450910:intron | 40.0% | |
| GCTGGTGGAATAAAGACAAT+TGG | - | chr3_3:37401213-37401232 | Msa0450910:intron | 40.0% | |
| !!! | ACTGCTTCCTTTTGGTTTCA+AGG | + | chr3_3:37401266-37401285 | None:intergenic | 40.0% |
| ! | CTTTAGTGACTGCTTCCTTT+TGG | + | chr3_3:37401274-37401293 | None:intergenic | 40.0% |
| AGGAAGCAGTCACTAAAGTA+TGG | - | chr3_3:37401276-37401295 | Msa0450910:intron | 40.0% | |
| AAACAATCCCGTCTTTCAAG+TGG | - | chr3_3:37401565-37401584 | Msa0450910:intron | 40.0% | |
| ! | CATTTCATGGATTGTGCACT+TGG | - | chr3_3:37401672-37401691 | Msa0450910:CDS | 40.0% |
| ! | GGGGTGAATTTTTGAATGCT+TGG | - | chr3_3:37401795-37401814 | Msa0450910:CDS | 40.0% |
| !! | CATGCTCAGGTTGAATTTGG+TGG | + | chr3_3:37401078-37401097 | None:intergenic | 45.0% |
| ! | CTTTATTCCACCAGCTTGCT+TGG | + | chr3_3:37401208-37401227 | None:intergenic | 45.0% |
| AGTCCAACAAATACTCCCAG+CGG | + | chr3_3:37401495-37401514 | None:intergenic | 45.0% | |
| ACATTTCTCAAGGCAATGGG+TGG | - | chr3_3:37401597-37401616 | Msa0450910:intron | 45.0% | |
| !! | CATGCTCAGGTTGAATTTGG+TGG | + | chr3_3:37401078-37401097 | None:intergenic | 45.0% |
| ! | CTTTATTCCACCAGCTTGCT+TGG | + | chr3_3:37401208-37401227 | None:intergenic | 45.0% |
| AGTCCAACAAATACTCCCAG+CGG | + | chr3_3:37401495-37401514 | None:intergenic | 45.0% | |
| ACATTTCTCAAGGCAATGGG+TGG | - | chr3_3:37401597-37401616 | Msa0450910:intron | 45.0% | |
| ! | TGCTTCAAAGAGGGTGTACG+AGG | - | chr3_3:37400920-37400939 | Msa0450910:intron | 50.0% |
| AAATAAGGGTTATCGGCCGC+TGG | - | chr3_3:37401476-37401495 | Msa0450910:intron | 50.0% | |
| AATAAGGGTTATCGGCCGCT+GGG | - | chr3_3:37401477-37401496 | Msa0450910:intron | 50.0% | |
| ! | TGCTTCAAAGAGGGTGTACG+AGG | - | chr3_3:37400920-37400939 | Msa0450910:intron | 50.0% |
| AAATAAGGGTTATCGGCCGC+TGG | - | chr3_3:37401476-37401495 | Msa0450910:intron | 50.0% | |
| AATAAGGGTTATCGGCCGCT+GGG | - | chr3_3:37401477-37401496 | Msa0450910:intron | 50.0% | |
| !! | TCTGCTCTAGGCTCCCCTTT+TGG | + | chr3_3:37400965-37400984 | None:intergenic | 55.0% |
| AACGAGATGTTCGGCGCGTA+TGG | - | chr3_3:37400991-37401010 | Msa0450910:intron | 55.0% | |
| !! | TCTGCTCTAGGCTCCCCTTT+TGG | + | chr3_3:37400965-37400984 | None:intergenic | 55.0% |
| AACGAGATGTTCGGCGCGTA+TGG | - | chr3_3:37400991-37401010 | Msa0450910:intron | 55.0% | |
| !! | CGGCCGCTGGGAGTATTTGT+TGG | - | chr3_3:37401489-37401508 | Msa0450910:intron | 60.0% |
| GACGGATCACGATGTCGCGA+TGG | - | chr3_3:37401641-37401660 | Msa0450910:intron | 60.0% | |
| !! | CGGCCGCTGGGAGTATTTGT+TGG | - | chr3_3:37401489-37401508 | Msa0450910:intron | 60.0% |
| GACGGATCACGATGTCGCGA+TGG | - | chr3_3:37401641-37401660 | Msa0450910:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 37400788 | 37401856 | 37400788 | ID=Msa0450910;Name=Msa0450910 |
| chr3_3 | mRNA | 37400788 | 37401856 | 37400788 | ID=Msa0450910-mRNA-1;Parent=Msa0450910;Name=Msa0450910-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|0|0|2|0|99 |
| chr3_3 | exon | 37401646 | 37401856 | 37401646 | ID=Msa0450910-mRNA-1:exon:6807;Parent=Msa0450910-mRNA-1 |
| chr3_3 | exon | 37400788 | 37400873 | 37400788 | ID=Msa0450910-mRNA-1:exon:6806;Parent=Msa0450910-mRNA-1 |
| chr3_3 | CDS | 37401646 | 37401856 | 37401646 | ID=Msa0450910-mRNA-1:cds;Parent=Msa0450910-mRNA-1 |
| chr3_3 | CDS | 37400788 | 37400873 | 37400788 | ID=Msa0450910-mRNA-1:cds;Parent=Msa0450910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
