AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0453750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0453750 MtrunA17_Chr3g0099881 98.785 494 5 1 1 494 1 493 0.0 1002
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0453750 AT2G24830.1 57.367 509 190 7 1 494 1 497 1.33e-170 490

Find 150 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACAGGGTTTAGGATTTA+TGG 0.135876 3_3:-44562048 Msa0453750:CDS
AAATTGACTTTGCGCTTATT+TGG 0.220999 3_3:-44560983 Msa0453750:three_prime_UTR
TTCCAAAATGATGGCGAATA+TGG 0.222774 3_3:-44561946 Msa0453750:CDS
CAGCCAATGCCTTGCGGGTT+TGG 0.224209 3_3:+44561454 None:intergenic
ACCCATATTCGCCATCATTT+TGG 0.227507 3_3:+44561944 None:intergenic
TTGTTTGCCAAATGTGATTT+TGG 0.240774 3_3:-44561009 Msa0453750:three_prime_UTR
AGGAATATGCCCCAACAATT+TGG 0.257401 3_3:-44562316 Msa0453750:CDS
AAATGGCAGAAGCAAATAAA+AGG 0.262038 3_3:-44561515 Msa0453750:CDS
CCCTTGCTGGGTCAAGTATA+TGG 0.274330 3_3:-44562286 Msa0453750:CDS
ATAATAATCTCGCACGCTTT+AGG 0.280179 3_3:+44565876 None:intergenic
GGAACTTGTTCAGGCAATTA+AGG 0.282463 3_3:-44565921 Msa0453750:CDS
TGCTTGGTTTACTGTATGTT+TGG 0.288507 3_3:-44561036 Msa0453750:three_prime_UTR
AGCCTAAACCCATTCCTTCT+TGG 0.291741 3_3:+44561919 None:intergenic
GAAGAGGAACCACAGGGTTT+AGG 0.304634 3_3:-44562056 Msa0453750:CDS
CTTAAGTCTCATAAAGTAGA+AGG 0.304712 3_3:-44561825 Msa0453750:CDS
ATTTGGAAGCCGTCCCTTGC+TGG 0.320960 3_3:-44562299 Msa0453750:CDS
CTTCTTCATTGATCCATTGT+TGG 0.324273 3_3:+44561644 None:intergenic
AGCCTCAGCCAATGCCTTGC+GGG 0.336670 3_3:+44561449 None:intergenic
GGAATGGGTTTAGGCTTAAC+TGG 0.336817 3_3:-44561912 Msa0453750:CDS
ATTTCATCCAAAATCACATT+TGG 0.349389 3_3:+44561002 None:intergenic
AAGCCGTAAGTTTGCTTGCT+TGG 0.350567 3_3:-44561052 Msa0453750:three_prime_UTR
CTTTGCAAATATAGCAGTTT+CGG 0.358366 3_3:+44561995 None:intergenic
TTCCTCTGAGCCGCTGTAAT+CGG 0.364138 3_3:+44562076 None:intergenic
AGACTTAAGTGCATGATCTA+AGG 0.378035 3_3:+44561839 None:intergenic
GGGACGGCTTCCAAATTGTT+GGG 0.381328 3_3:+44562306 None:intergenic
GGTTCACGAGGAACTTGTTC+AGG 0.382347 3_3:-44565930 Msa0453750:CDS
GGTTCTAAAATTTGAACAAA+TGG 0.394751 3_3:-44561532 Msa0453750:CDS
TTCATAGCAGCATCATAAAC+AGG 0.396986 3_3:+44561486 None:intergenic
TACCTCGAGGAGTTCGGAAT+TGG 0.397854 3_3:+44567777 None:intergenic
GGGTTTAGGCTTAACTGGTC+AGG 0.398564 3_3:-44561907 Msa0453750:CDS
TACCAAGAAGGAATGGGTTT+AGG 0.400375 3_3:-44561921 Msa0453750:CDS
AGGTTCAGGTGAAGGTAAAA+AGG 0.401500 3_3:-44561610 Msa0453750:CDS
GCTTGGTTTACTGTATGTTT+GGG 0.408415 3_3:-44561035 Msa0453750:three_prime_UTR
TTACAACAACGATGTCGATT+TGG 0.412824 3_3:-44563444 Msa0453750:CDS
ATAATTTAATAAAGTGAAGA+AGG 0.415640 3_3:-44567955 None:intergenic
TCAAAGCATCTGCCTGCATA+AGG 0.426981 3_3:+44561295 None:intergenic
AGGCTTAACTGGTCAGGGTA+TGG 0.427130 3_3:-44561901 Msa0453750:CDS
CAAATGCAAATGCAGGCATT+TGG 0.433219 3_3:-44562256 Msa0453750:CDS
TGGAAGCCATGCCTCTGGTA+TGG 0.440011 3_3:+44561964 None:intergenic
TGGTAGAACCTTCACTGGTA+TGG 0.441015 3_3:+44561872 None:intergenic
TGTAGATTCCGTTACAAAGA+TGG 0.441548 3_3:-44565728 Msa0453750:CDS
CCAGAGGTGGTAAGAGAAAA+CGG 0.441799 3_3:-44561773 Msa0453750:CDS
TCCAAAATGATGGCGAATAT+GGG 0.445234 3_3:-44561945 Msa0453750:CDS
TGAAGATACCTCGAGGAGTT+CGG 0.446790 3_3:+44567771 None:intergenic
TTTATTAGCGAGAAGACATC+TGG 0.450734 3_3:+44561696 None:intergenic
AGGGACGGCTTCCAAATTGT+TGG 0.452556 3_3:+44562305 None:intergenic
ATTACATAGGGCATTTCATT+CGG 0.459570 3_3:-44560881 Msa0453750:three_prime_UTR
TTGAACACCTTTCTGTAAGT+TGG 0.461253 3_3:+44562019 None:intergenic
GCGCAGCACTGTGTCTGCTT+CGG 0.464332 3_3:+44565853 None:intergenic
AAGCAGCAAACTAAAGGTTC+AGG 0.467001 3_3:-44561624 Msa0453750:CDS
CCTTGCTGGGTCAAGTATAT+GGG 0.467348 3_3:-44562285 Msa0453750:CDS
CGCAAAAGAAGAAGAAGAAT+CGG 0.472074 3_3:-44561721 Msa0453750:CDS
CAATGGTCAAGTGATGCAAT+TGG 0.476631 3_3:-44565696 Msa0453750:CDS
GTTCGGAATTGGTTGGATCA+AGG 0.480602 3_3:+44567788 None:intergenic
ATGTCTACAACGAGCAATCC+TGG 0.483472 3_3:+44560902 None:intergenic
GGCTCTGGTTCAACATCTGC+AGG 0.485074 3_3:+44565785 None:intergenic
GAGAGTCCTTGAAAACCAAC+TGG 0.486111 3_3:-44567866 Msa0453750:CDS
AACCCGCAAGGCATTGGCTG+AGG 0.488844 3_3:-44561451 Msa0453750:CDS
CAGCCTCAGCCAATGCCTTG+CGG 0.490138 3_3:+44561448 None:intergenic
GCATGATCTAAGGACTGCTT+AGG 0.491473 3_3:+44561849 None:intergenic
AGTCCAAACCCGCAAGGCAT+TGG 0.491568 3_3:-44561457 Msa0453750:CDS
GCGAATATGGGTTACCAAGA+AGG 0.492625 3_3:-44561933 Msa0453750:CDS
CTGACCACTCAGGTGAAAGA+AGG 0.494272 3_3:+44561091 None:intergenic
ATGGGTTACCAAGAAGGAAT+GGG 0.495197 3_3:-44561927 Msa0453750:CDS
GAAATGCAAGATTTACAACT+TGG 0.501295 3_3:+44560952 None:intergenic
GAAGCTTGGTGCACAAGATA+TGG 0.501366 3_3:-44562156 Msa0453750:CDS
TTTGGAAGCCGTCCCTTGCT+GGG 0.503809 3_3:-44562298 Msa0453750:CDS
TCCGTTACAAAGATGGGCAT+TGG 0.507121 3_3:-44565721 Msa0453750:CDS
GTTGGAAGCTTCGCCGTGCA+TGG 0.514519 3_3:+44561662 None:intergenic
ATGAAGAAGCAGCAAACTAA+AGG 0.515847 3_3:-44561630 Msa0453750:CDS
CCCATATACTTGACCCAGCA+AGG 0.517571 3_3:+44562285 None:intergenic
GTAATCGGATTGTTCTAAGC+TGG 0.518452 3_3:+44562091 None:intergenic
CAGAGGTGGTAAGAGAAAAC+GGG 0.519218 3_3:-44561772 Msa0453750:CDS
TATGGGTTACCAAGAAGGAA+TGG 0.519292 3_3:-44561928 Msa0453750:CDS
TTGTGAGGTGGAACGAGAAT+GGG 0.520193 3_3:-44567901 Msa0453750:exon
AACTGCTATATTTGCAAAGT+GGG 0.524028 3_3:-44561991 Msa0453750:CDS
TCCTACATCTGAAAATATGC+TGG 0.524946 3_3:-44565642 Msa0453750:intron
TTCGTCCCATGACTCGAGCT+CGG 0.525173 3_3:+44562226 None:intergenic
GTAGATTCCGTTACAAAGAT+GGG 0.525336 3_3:-44565727 Msa0453750:CDS
ATTGTGAGGTGGAACGAGAA+TGG 0.526391 3_3:-44567902 Msa0453750:exon
CTCAGAGGAAGAGGAACCAC+AGG 0.529152 3_3:-44562063 Msa0453750:CDS
AAGGGAACATTGAGAAGCAA+AGG 0.533022 3_3:-44561806 Msa0453750:CDS
GGTAGAACCTTCACTGGTAT+GGG 0.533043 3_3:+44561873 None:intergenic
AGCAGCCGAGCTCGAGTCAT+GGG 0.533064 3_3:-44562231 Msa0453750:CDS
TGTTGGGGCATATTCCTTGA+GGG 0.534913 3_3:+44562322 None:intergenic
TTGAGAAGCAAAGGAAGAAA+CGG 0.535420 3_3:-44561797 Msa0453750:CDS
TTACAGCGGCTCAGAGGAAG+AGG 0.535906 3_3:-44562072 Msa0453750:CDS
CATTCAAAATATCCTTATGC+AGG 0.536175 3_3:-44561307 Msa0453750:three_prime_UTR
CTCGTTGTAGACATTACATA+GGG 0.536966 3_3:-44560893 Msa0453750:three_prime_UTR
AAACCAAGCAAGCAAACTTA+CGG 0.538696 3_3:+44561049 None:intergenic
AGGCATGGCTTCCAAAATGA+TGG 0.538766 3_3:-44561955 Msa0453750:CDS
AATGGCAGAAGCAAATAAAA+GGG 0.538938 3_3:-44561514 Msa0453750:CDS
CATGTAATTGAAGTTCCAGT+TGG 0.543818 3_3:+44567851 None:intergenic
GAGCAGCCGAGCTCGAGTCA+TGG 0.546303 3_3:-44562232 Msa0453750:CDS
GCTCGTTGTAGACATTACAT+AGG 0.546719 3_3:-44560894 Msa0453750:three_prime_UTR
GCAATTAAGGATGCCGAGGA+AGG 0.547779 3_3:-44565908 Msa0453750:CDS
TAATTTAATAAAGTGAAGAA+GGG 0.549996 3_3:-44567954 None:intergenic
GGTTTAGGCTTAACTGGTCA+GGG 0.554398 3_3:-44561906 Msa0453750:CDS
TGACCACTCAGGTGAAAGAA+GGG 0.557501 3_3:+44561092 None:intergenic
AACAACATCATCTGAGGCAG+AGG 0.558032 3_3:+44561413 None:intergenic
TGCACTGAAATTATGTGACC+AGG 0.563473 3_3:-44560920 Msa0453750:three_prime_UTR
CACGGCGAAGCTTCCAACAA+TGG 0.566788 3_3:-44561657 Msa0453750:CDS
TCGAGGAGTTCGGAATTGGT+TGG 0.566915 3_3:+44567781 None:intergenic
TTAGCAGCTTACCATGGGAT+AGG 0.568857 3_3:+44563409 None:intergenic
ACCACTCAGGTGAAAGAAGG+GGG 0.570777 3_3:+44561094 None:intergenic
AAAGATGGGCATTGGTACAA+TGG 0.572877 3_3:-44565713 Msa0453750:CDS
AATTGGTTTGTATTGTGAGG+TGG 0.573179 3_3:-44567913 Msa0453750:five_prime_UTR
TCACAGAACTTCCATCATCT+CGG 0.575569 3_3:+44562177 None:intergenic
GCAGTCTCAAATGCAAATGC+AGG 0.576110 3_3:-44562263 Msa0453750:CDS
TTAGGTGGTAGAACCTTCAC+TGG 0.576337 3_3:+44561867 None:intergenic
TGTTCAACTGACTTCCCTCA+AGG 0.578427 3_3:-44562336 Msa0453750:CDS
ACCAATGCCCATCTTTGTAA+CGG 0.579207 3_3:+44565720 None:intergenic
GATAGTACCAACTTACAGAA+AGG 0.582032 3_3:-44562026 Msa0453750:CDS
CAAACTAAAGGTTCAGGTGA+AGG 0.587932 3_3:-44561618 Msa0453750:CDS
TGTGAAGGATTTGAAAGTGC+AGG 0.591216 3_3:-44561553 Msa0453750:CDS
TCAACATCTGCAGGATCAAG+TGG 0.594691 3_3:+44565794 None:intergenic
TTAAGTCTCATAAAGTAGAA+GGG 0.596742 3_3:-44561824 Msa0453750:CDS
TTGTTGGGGCATATTCCTTG+AGG 0.597670 3_3:+44562321 None:intergenic
TAGGTGAAGAAGTCCTTCCT+CGG 0.599243 3_3:+44565895 None:intergenic
GGACGGCTTCCAAATTGTTG+GGG 0.603564 3_3:+44562307 None:intergenic
AGGAAGAAACGGACCAGAGG+TGG 0.605286 3_3:-44561786 Msa0453750:CDS
AAACTGCTATATTTGCAAAG+TGG 0.608463 3_3:-44561992 Msa0453750:CDS
TGCTTATGAGAATGATGTGA+AGG 0.609787 3_3:-44561568 Msa0453750:CDS
AACACTCAACTAGCCATGCA+CGG 0.610506 3_3:-44561675 Msa0453750:CDS
CACTCAGGTGAAAGAAGGGG+GGG 0.611567 3_3:+44561096 None:intergenic
TGATCTAAGGACTGCTTAGG+TGG 0.612721 3_3:+44561852 None:intergenic
AGTAACTGTCGCCTATCCCA+TGG 0.613342 3_3:-44563420 Msa0453750:intron
CAAAGGAAGAAACGGACCAG+AGG 0.617674 3_3:-44561789 Msa0453750:CDS
GATGCAATTGGATAATTCAG+TGG 0.621983 3_3:-44565684 Msa0453750:CDS
GGTTGATCCCATACCAGTGA+AGG 0.622390 3_3:-44561880 Msa0453750:CDS
TTCGATATCCCAGGTTCACG+AGG 0.623116 3_3:-44565942 Msa0453750:intron
GACCACTCAGGTGAAAGAAG+GGG 0.623259 3_3:+44561093 None:intergenic
TTTGCTAACAACATCATCTG+AGG 0.624235 3_3:+44561407 None:intergenic
CAGTGTAATGCTGACCACTC+AGG 0.627828 3_3:+44561081 None:intergenic
GATGGAAGTTCTGTGAAGCT+TGG 0.627941 3_3:-44562170 Msa0453750:CDS
CAAGATTTACAACTTGGACG+CGG 0.629736 3_3:+44560958 None:intergenic
GGAGAACCATACCAGAGGCA+TGG 0.631835 3_3:-44561970 Msa0453750:CDS
AAAATTAGTCCAAACCCGCA+AGG 0.632774 3_3:-44561463 Msa0453750:CDS
AAAAGCTGGAGTTGGACAAG+TGG 0.633907 3_3:-44562204 Msa0453750:CDS
ATACTTGACCCAGCAAGGGA+CGG 0.637535 3_3:+44562290 None:intergenic
ATCCGATTACAGCGGCTCAG+AGG 0.638535 3_3:-44562078 Msa0453750:CDS
GAAAATTGGTTTGTATTGTG+AGG 0.644787 3_3:-44567916 Msa0453750:five_prime_UTR
TCAGGCAATTAAGGATGCCG+AGG 0.649742 3_3:-44565912 Msa0453750:CDS
CCATATACTTGACCCAGCAA+GGG 0.649886 3_3:+44562286 None:intergenic
AACCAATTCCGAACTCCTCG+AGG 0.659085 3_3:-44567779 Msa0453750:intron
CCACTCAGGTGAAAGAAGGG+GGG 0.679833 3_3:+44561095 None:intergenic
TCCATAAATCCTAAACCCTG+TGG 0.699072 3_3:+44562047 None:intergenic
AAGTGGGAGAACCATACCAG+AGG 0.724288 3_3:-44561975 Msa0453750:CDS
TTAGAACAATCCGATTACAG+CGG 0.729255 3_3:-44562086 Msa0453750:CDS
TCAGAGGAAGAGGAACCACA+GGG 0.729850 3_3:-44562062 Msa0453750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTAATAAATAAATA+TGG - chr3_3:44564575-44564594 Msa0453750:intron 0.0%
!!! TTTTTTTTTTTTTGTTCTCT+TGG - chr3_3:44561449-44561468 Msa0453750:CDS 15.0%
!! TTTCTTATGATAAAAGATAT+AGG - chr3_3:44561616-44561635 Msa0453750:CDS 15.0%
!!! AAACATTTTGACTTTATTTT+GGG + chr3_3:44562130-44562149 None:intergenic 15.0%
!!! AAAACATTTTGACTTTATTT+TGG + chr3_3:44562131-44562150 None:intergenic 15.0%
!!! CAACTTTTAAAAGAATAATA+TGG + chr3_3:44563656-44563675 None:intergenic 15.0%
!! TATCATATAAAATCACTTAT+AGG - chr3_3:44563746-44563765 Msa0453750:intron 15.0%
!! ATAACTTAAATCATTTATAG+AGG + chr3_3:44564685-44564704 None:intergenic 15.0%
!!! TTTTTTTGTTTTTGTTTTAG+AGG - chr3_3:44564763-44564782 Msa0453750:intron 15.0%
!! ACAAAATTTATATCTCATAA+TGG + chr3_3:44565690-44565709 None:intergenic 15.0%
!!! TAACATCTTGAAATTTTTTT+AGG - chr3_3:44565711-44565730 Msa0453750:CDS 15.0%
!!! TTGGAAGTTTATTTTTAAAA+TGG - chr3_3:44565820-44565839 Msa0453750:CDS 15.0%
!!! ATTTTGTTCTAGTATAAATA+AGG + chr3_3:44566227-44566246 None:intergenic 15.0%
!!! ATTCATATATTTTGTTATGT+AGG - chr3_3:44566420-44566439 Msa0453750:intron 15.0%
!! AATCTAAATCTCCATTTATT+AGG - chr3_3:44561080-44561099 Msa0453750:three_prime_UTR 20.0%
!! ATCTAAATCTCCATTTATTA+GGG - chr3_3:44561081-44561100 Msa0453750:three_prime_UTR 20.0%
!! TCATATGTCATAATTGATTA+TGG + chr3_3:44561220-44561239 None:intergenic 20.0%
!! TTTACATATATAACCTAATG+TGG + chr3_3:44561359-44561378 None:intergenic 20.0%
!! ATGAAAATAAAGGTGAAAAT+AGG - chr3_3:44562195-44562214 Msa0453750:CDS 20.0%
!!! GTTGTTGAATTATTTTAGAA+TGG - chr3_3:44562637-44562656 Msa0453750:intron 20.0%
!!! TTGAATTATTTTAGAATGGA+TGG - chr3_3:44562641-44562660 Msa0453750:intron 20.0%
!!! TTTTTTATTTGTTATAGCAG+TGG + chr3_3:44563268-44563287 None:intergenic 20.0%
!! AATGTAACATATATAGAGAA+GGG - chr3_3:44563333-44563352 Msa0453750:intron 20.0%
!! TCTACTTCTAAATAAATCTA+GGG + chr3_3:44563397-44563416 None:intergenic 20.0%
!! TAAATGTTGTCTTAGTTTAA+GGG - chr3_3:44563508-44563527 Msa0453750:intron 20.0%
!!! ACAAGATTAAATCTTTAAGA+GGG + chr3_3:44563880-44563899 None:intergenic 20.0%
!! AACAAGATTAAATCTTTAAG+AGG + chr3_3:44563881-44563900 None:intergenic 20.0%
!! TCTTAAAGATTTAATCTTGT+TGG - chr3_3:44563880-44563899 Msa0453750:intron 20.0%
!! TAAAGTTCTTATTGCAAAAT+AGG - chr3_3:44563936-44563955 Msa0453750:intron 20.0%
!! AAAGTTCTTATTGCAAAATA+GGG - chr3_3:44563937-44563956 Msa0453750:intron 20.0%
!!! ATATTGGTTTTTTTTAAGGT+TGG + chr3_3:44564003-44564022 None:intergenic 20.0%
!!! CAAGATATTGGTTTTTTTTA+AGG + chr3_3:44564007-44564026 None:intergenic 20.0%
!! TGGAAAAATTTCTTAGAAAA+TGG - chr3_3:44564035-44564054 Msa0453750:intron 20.0%
!! AAAATAGGAGCAAAAAAAAA+AGG + chr3_3:44564288-44564307 None:intergenic 20.0%
!! AAAAGTTGAAATTCGAAAAT+AGG + chr3_3:44564303-44564322 None:intergenic 20.0%
!!! TCGAATTTCAACTTTTTTTT+TGG - chr3_3:44564307-44564326 Msa0453750:intron 20.0%
!!! TCAACTTTTTTTTTGGTTTT+TGG - chr3_3:44564314-44564333 Msa0453750:intron 20.0%
!! TAAATAAATATGGTCAAAGT+AGG - chr3_3:44564585-44564604 Msa0453750:intron 20.0%
!! TGGTATTATAAGGTAATTAA+TGG + chr3_3:44564952-44564971 None:intergenic 20.0%
!!! TTGTTTTTCATGGTATTATA+AGG + chr3_3:44564962-44564981 None:intergenic 20.0%
!!! ATGATTTTTCTTGTTTTTCA+TGG + chr3_3:44564972-44564991 None:intergenic 20.0%
!! TGGTATTATAAGGTAATTAA+TGG + chr3_3:44564952-44564971 None:intergenic 20.0%
!!! TTGTTTTTCATGGTATTATA+AGG + chr3_3:44564962-44564981 None:intergenic 20.0%
!!! ATGATTTTTCTTGTTTTTCA+TGG + chr3_3:44564972-44564991 None:intergenic 20.0%
!!! ATTTTTACTCCTCAAAATTT+AGG - chr3_3:44565266-44565285 Msa0453750:intron 20.0%
!! ACAAGAAATCAAAGAAATAA+CGG + chr3_3:44565536-44565555 None:intergenic 20.0%
!!! AGTTTATGTGAATAAACTTT+TGG - chr3_3:44565587-44565606 Msa0453750:intron 20.0%
!! ATAGTTATGTCTAACAATAA+AGG + chr3_3:44565625-44565644 None:intergenic 20.0%
!! TTTATTGTTAGACATAACTA+TGG - chr3_3:44565624-44565643 Msa0453750:intron 20.0%
!! TCTACATTTCAATTTCATTT+AGG - chr3_3:44565779-44565798 Msa0453750:CDS 20.0%
!! AAGAGAAAAAAAAAAAGACA+TGG - chr3_3:44566149-44566168 Msa0453750:intron 20.0%
!! ATTATAGTTTGATATGATTG+AGG - chr3_3:44566179-44566198 Msa0453750:intron 20.0%
!! TTTGTAATATCTATGTTTAC+AGG - chr3_3:44566451-44566470 Msa0453750:intron 20.0%
!!! TTAAGTTTTAGTTAGTACTT+AGG - chr3_3:44567451-44567470 Msa0453750:intron 20.0%
! GAAAGAAAAAGAAGGAAAAT+TGG - chr3_3:44560886-44560905 Msa0453750:three_prime_UTR 25.0%
! TATGTCATAATTGATTATGG+AGG + chr3_3:44561217-44561236 None:intergenic 25.0%
! ATGTAAATCAATCAAAGCAT+AGG - chr3_3:44561372-44561391 Msa0453750:exon 25.0%
! TGTAAATCAATCAAAGCATA+GGG - chr3_3:44561373-44561392 Msa0453750:exon 25.0%
!! TGTAGCATTTTGTATTTGAA+TGG - chr3_3:44561412-44561431 Msa0453750:CDS 25.0%
!! CATTTTTATTCCACTGTTTT+AGG + chr3_3:44561481-44561500 None:intergenic 25.0%
!! AAAATTAGTCTAATCCAAAC+AGG + chr3_3:44561693-44561712 None:intergenic 25.0%
! TTATGCAAAAACAGTTTATG+AGG + chr3_3:44561779-44561798 None:intergenic 25.0%
!! ACTGTTTTCATGAATTATAC+TGG - chr3_3:44562165-44562184 Msa0453750:CDS 25.0%
! ATAAAGGTGAAAATAGGTTA+TGG - chr3_3:44562201-44562220 Msa0453750:CDS 25.0%
!!! GATTTTGTTTATATGCAGAA+TGG + chr3_3:44562445-44562464 None:intergenic 25.0%
!! ATGTGAGAATACAATTTTCT+GGG + chr3_3:44562721-44562740 None:intergenic 25.0%
! AGAAAATTGTATTCTCACAT+GGG - chr3_3:44562721-44562740 Msa0453750:intron 25.0%
! ATTCAGTCTAAAAATAGACT+AGG + chr3_3:44562844-44562863 None:intergenic 25.0%
!! CTGGTATGTAAAATCATTTT+GGG - chr3_3:44563193-44563212 Msa0453750:intron 25.0%
! GAATGTAACATATATAGAGA+AGG - chr3_3:44563332-44563351 Msa0453750:intron 25.0%
! ATATATAGAGAAGGGAAAAT+AGG - chr3_3:44563341-44563360 Msa0453750:intron 25.0%
! CTCTACTTCTAAATAAATCT+AGG + chr3_3:44563398-44563417 None:intergenic 25.0%
! AGAGAAAAAAGCAAATGATT+AGG - chr3_3:44563414-44563433 Msa0453750:intron 25.0%
! CTAAATGTTGTCTTAGTTTA+AGG - chr3_3:44563507-44563526 Msa0453750:intron 25.0%
!!! TGTTTTTATTTGGTCTCATA+AGG + chr3_3:44563543-44563562 None:intergenic 25.0%
! ACATTTACCTAACTAGATTT+AGG + chr3_3:44563772-44563791 None:intergenic 25.0%
!! GTCAAGTTAGACTTTTAAAT+AGG - chr3_3:44563977-44563996 Msa0453750:intron 25.0%
! ATTTGATGTTTCAACAGTTT+AGG - chr3_3:44564134-44564153 Msa0453750:intron 25.0%
! ATTTCGTCATCTTAACATTT+CGG - chr3_3:44564887-44564906 Msa0453750:intron 25.0%
! ATTTCGTCATCTTAACATTT+CGG - chr3_3:44564887-44564906 Msa0453750:intron 25.0%
!!! AATCTAGAACCTAAATTTTG+AGG + chr3_3:44565278-44565297 None:intergenic 25.0%
! TCTAACAATAAAGGAAAACT+TGG + chr3_3:44565616-44565635 None:intergenic 25.0%
!!! CATCTTGAAATTTTTTTAGG+TGG - chr3_3:44565714-44565733 Msa0453750:CDS 25.0%
!! AATTTCATTTAGGTTCATTG+CGG - chr3_3:44565789-44565808 Msa0453750:CDS 25.0%
!!! ATAATCCCCTTCTTTATTTT+TGG - chr3_3:44565988-44566007 Msa0453750:intron 25.0%
! AAATAAACACATGGTGTATT+AGG + chr3_3:44566070-44566089 None:intergenic 25.0%
! CACATTTGAAAATAAACACA+TGG + chr3_3:44566079-44566098 None:intergenic 25.0%
!!! TGTGTTTATTTTCAAATGTG+TGG - chr3_3:44566079-44566098 Msa0453750:intron 25.0%
! TTATAGGATTTCAGATAAAG+AGG - chr3_3:44566125-44566144 Msa0453750:intron 25.0%
! TATAGGATTTCAGATAAAGA+GGG - chr3_3:44566126-44566145 Msa0453750:intron 25.0%
! TAAAACTGTTCATTCAAACA+GGG - chr3_3:44566250-44566269 Msa0453750:intron 25.0%
! TTAAGTCTCATAAAGTAGAA+GGG - chr3_3:44566992-44567011 Msa0453750:intron 25.0%
!!! GGTTCTAAAATTTGAACAAA+TGG - chr3_3:44567284-44567303 Msa0453750:intron 25.0%
! ATTTCATCCAAAATCACATT+TGG + chr3_3:44567817-44567836 None:intergenic 25.0%
!! GAAAATTGGTTTGTATTGTG+AGG - chr3_3:44560900-44560919 Msa0453750:three_prime_UTR 30.0%
AATCTCCATTTATTAGGGTT+TGG - chr3_3:44561086-44561105 Msa0453750:three_prime_UTR 30.0%
AGAATTAACTCTGACATGTT+CGG + chr3_3:44561191-44561210 None:intergenic 30.0%
CAATTATGACATATGAAGCA+CGG - chr3_3:44561224-44561243 Msa0453750:intron 30.0%
TTGTATTTGAATGGAACTGA+AGG - chr3_3:44561421-44561440 Msa0453750:CDS 30.0%
TATGATAAAAGATATAGGCC+CGG - chr3_3:44561621-44561640 Msa0453750:CDS 30.0%
CAAAATAAGCCTAATCCAAA+CGG - chr3_3:44561868-44561887 Msa0453750:CDS 30.0%
AAAATAAGCCTAATCCAAAC+GGG - chr3_3:44561869-44561888 Msa0453750:CDS 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr3_3:44561981-44562000 Msa0453750:CDS 30.0%
TGGACAGCTTATGAAAATAA+AGG - chr3_3:44562185-44562204 Msa0453750:CDS 30.0%
CTCTTTATATTCCGTATTCA+TGG - chr3_3:44562525-44562544 Msa0453750:intron 30.0%
! TGTCCTTGTTTATATGAGTT+TGG - chr3_3:44562548-44562567 Msa0453750:intron 30.0%
! GTCCTTGTTTATATGAGTTT+GGG - chr3_3:44562549-44562568 Msa0453750:intron 30.0%
TTGTTTATATGAGTTTGGGT+GGG - chr3_3:44562553-44562572 Msa0453750:intron 30.0%
GTTAAATATACCGGATTACT+GGG - chr3_3:44562575-44562594 Msa0453750:intron 30.0%
ATAATTCAACAACAGCATGT+TGG + chr3_3:44562630-44562649 None:intergenic 30.0%
! TGTGAGAATACAATTTTCTG+GGG + chr3_3:44562720-44562739 None:intergenic 30.0%
! CATGTGAGAATACAATTTTC+TGG + chr3_3:44562722-44562741 None:intergenic 30.0%
CAGAAAATTGTATTCTCACA+TGG - chr3_3:44562720-44562739 Msa0453750:intron 30.0%
AAACATAGGTTCGATTGATA+TGG - chr3_3:44562768-44562787 Msa0453750:intron 30.0%
TTGAATGACAGTCATAATCA+TGG + chr3_3:44562815-44562834 None:intergenic 30.0%
TTAAAATTGTTCGATATCCC+AGG - chr3_3:44562865-44562884 Msa0453750:intron 30.0%
! TTTTGCTGAAGAAAAGAAAG+TGG - chr3_3:44562997-44563016 Msa0453750:intron 30.0%
!!! GAAAAGCTTTTTTCTTCTAG+CGG + chr3_3:44563055-44563074 None:intergenic 30.0%
! GAAGAAAAAAGCTTTTCTGT+TGG - chr3_3:44563058-44563077 Msa0453750:intron 30.0%
! GCTGGTATGTAAAATCATTT+TGG - chr3_3:44563192-44563211 Msa0453750:intron 30.0%
TTATAGCAGTGGAAATTAAG+GGG + chr3_3:44563257-44563276 None:intergenic 30.0%
GTTATAGCAGTGGAAATTAA+GGG + chr3_3:44563258-44563277 None:intergenic 30.0%
TGTTATAGCAGTGGAAATTA+AGG + chr3_3:44563259-44563278 None:intergenic 30.0%
GTAAAAGTAAAGGGTAATGA+GGG + chr3_3:44563460-44563479 None:intergenic 30.0%
!!! TCATTTTCCTTTTTTGGTGT+GGG + chr3_3:44563483-44563502 None:intergenic 30.0%
!!! ATCATTTTCCTTTTTTGGTG+TGG + chr3_3:44563484-44563503 None:intergenic 30.0%
! AGCTGATCATTTTCCTTTTT+TGG + chr3_3:44563489-44563508 None:intergenic 30.0%
!! CACATGAACGTGTTTTTATT+TGG + chr3_3:44563553-44563572 None:intergenic 30.0%
!! GGATAAAACTCTAAAACACT+TGG + chr3_3:44563626-44563645 None:intergenic 30.0%
!!! GTTTTAGAGTTTTATCCTTG+TGG - chr3_3:44563629-44563648 Msa0453750:intron 30.0%
AAAGAATAATATGGACCACA+AGG + chr3_3:44563647-44563666 None:intergenic 30.0%
GTTGAATTTACGCACAATAT+AGG - chr3_3:44563672-44563691 Msa0453750:intron 30.0%
!! CGGTCTTATTGAAATTCAAA+GGG - chr3_3:44563695-44563714 Msa0453750:intron 30.0%
TTATAGGCCTAAATCTAGTT+AGG - chr3_3:44563762-44563781 Msa0453750:intron 30.0%
! TATGTTCAAGTCTTTTGCAT+AGG + chr3_3:44563906-44563925 None:intergenic 30.0%
TAGCATGCTTCAAAAAGATA+TGG + chr3_3:44564082-44564101 None:intergenic 30.0%
AAGTGTCAAATGAGTTACTA+AGG + chr3_3:44564187-44564206 None:intergenic 30.0%
!! AGTGTTTTGTTAGTGTAGAT+TGG - chr3_3:44564217-44564236 Msa0453750:intron 30.0%
AAACGATGCTTAAAAAGGAA+CGG + chr3_3:44564413-44564432 None:intergenic 30.0%
GTCAAAAACGATGCTTAAAA+AGG + chr3_3:44564418-44564437 None:intergenic 30.0%
TATTCTTGGCTAGTAAAATC+TGG - chr3_3:44564809-44564828 Msa0453750:intron 30.0%
CATTCTGATTGAACATTATG+TGG - chr3_3:44564989-44565008 Msa0453750:intron 30.0%
ATATGTGTGTGAAGTAGATA+TGG - chr3_3:44565015-44565034 Msa0453750:intron 30.0%
CATTCTGATTGAACATTATG+TGG - chr3_3:44564989-44565008 Msa0453750:intron 30.0%
ATATGTGTGTGAAGTAGATA+TGG - chr3_3:44565015-44565034 Msa0453750:intron 30.0%
! TATTCACATAAACTAGCTCT+CGG + chr3_3:44565581-44565600 None:intergenic 30.0%
TAACTATGGTTATCATCACA+AGG - chr3_3:44565638-44565657 Msa0453750:intron 30.0%
AACTATGGTTATCATCACAA+GGG - chr3_3:44565639-44565658 Msa0453750:intron 30.0%
GTTTGTGTACTTGAATCTAT+AGG - chr3_3:44565736-44565755 Msa0453750:CDS 30.0%
! ATTTCATTTAGGTTCATTGC+GGG - chr3_3:44565790-44565809 Msa0453750:CDS 30.0%
CACAAACATTGAAATGGAAA+AGG + chr3_3:44565850-44565869 None:intergenic 30.0%
! CTTTTCCATTTCAATGTTTG+TGG - chr3_3:44565848-44565867 Msa0453750:CDS 30.0%
TAATGCCACAAACATTGAAA+TGG + chr3_3:44565856-44565875 None:intergenic 30.0%
ATTTCAATGTTTGTGGCATT+AGG - chr3_3:44565855-44565874 Msa0453750:CDS 30.0%
TTTCAATGTTTGTGGCATTA+GGG - chr3_3:44565856-44565875 Msa0453750:CDS 30.0%
! CTGTTTGAATGAACAGTTTT+AGG + chr3_3:44566251-44566270 None:intergenic 30.0%
CTAAAACTGTTCATTCAAAC+AGG - chr3_3:44566249-44566268 Msa0453750:intron 30.0%
CTTTGCAAATATAGCAGTTT+CGG + chr3_3:44566824-44566843 None:intergenic 30.0%
AAACTGCTATATTTGCAAAG+TGG - chr3_3:44566824-44566843 Msa0453750:intron 30.0%
AACTGCTATATTTGCAAAGT+GGG - chr3_3:44566825-44566844 Msa0453750:intron 30.0%
CTTAAGTCTCATAAAGTAGA+AGG - chr3_3:44566991-44567010 Msa0453750:intron 30.0%
AAAGGTGGATAGAAAAATGT+TGG - chr3_3:44567224-44567243 Msa0453750:intron 30.0%
AAATGGCAGAAGCAAATAAA+AGG - chr3_3:44567301-44567320 Msa0453750:intron 30.0%
AATGGCAGAAGCAAATAAAA+GGG - chr3_3:44567302-44567321 Msa0453750:intron 30.0%
GCAAAGAAAAAGATAAGAGA+TGG - chr3_3:44567427-44567446 Msa0453750:intron 30.0%
CATTCAAAATATCCTTATGC+AGG - chr3_3:44567509-44567528 Msa0453750:intron 30.0%
GAAAAAGAAAGAAATCTCAC+AGG - chr3_3:44567550-44567569 Msa0453750:intron 30.0%
! TTGTTTGCCAAATGTGATTT+TGG - chr3_3:44567807-44567826 Msa0453750:CDS 30.0%
! AAATTGACTTTGCGCTTATT+TGG - chr3_3:44567833-44567852 Msa0453750:CDS 30.0%
GAAATGCAAGATTTACAACT+TGG + chr3_3:44567867-44567886 None:intergenic 30.0%
! ATTACATAGGGCATTTCATT+CGG - chr3_3:44567935-44567954 Msa0453750:five_prime_UTR 30.0%
AGAAGGGAGAAAGAAAAAGA+AGG - chr3_3:44560878-44560897 Msa0453750:three_prime_UTR 35.0%
!! AATTGGTTTGTATTGTGAGG+TGG - chr3_3:44560903-44560922 Msa0453750:three_prime_UTR 35.0%
CATGTAATTGAAGTTCCAGT+TGG + chr3_3:44560968-44560987 None:intergenic 35.0%
TTGAAATTGAAGATACCTCG+AGG + chr3_3:44561055-44561074 None:intergenic 35.0%
CCAAACCAAACCCTAATAAA+TGG + chr3_3:44561094-44561113 None:intergenic 35.0%
! CCATTTATTAGGGTTTGGTT+TGG - chr3_3:44561091-44561110 Msa0453750:three_prime_UTR 35.0%
! ACAAATGACATCTCTAGAAG+TGG - chr3_3:44561310-44561329 Msa0453750:three_prime_UTR 35.0%
TTGGTATTTGCCTAAAACAG+TGG - chr3_3:44561468-44561487 Msa0453750:CDS 35.0%
CAAAGTTGTGCGAATTATGT+TGG - chr3_3:44561525-44561544 Msa0453750:CDS 35.0%
AGCTTATAGCATACACACTT+AGG - chr3_3:44561666-44561685 Msa0453750:CDS 35.0%
GCTTATAGCATACACACTTA+GGG - chr3_3:44561667-44561686 Msa0453750:CDS 35.0%
GAGCTTCTCATGATAAGTAA+GGG + chr3_3:44561895-44561914 None:intergenic 35.0%
AGAGCTTCTCATGATAAGTA+AGG + chr3_3:44561896-44561915 None:intergenic 35.0%
! GCATAAGTTTGAGACTGTTT+GGG + chr3_3:44562072-44562091 None:intergenic 35.0%
! AGCATAAGTTTGAGACTGTT+TGG + chr3_3:44562073-44562092 None:intergenic 35.0%
AAACAGTCTCAAACTTATGC+TGG - chr3_3:44562072-44562091 Msa0453750:CDS 35.0%
!! TATTTTGGGTCTCTTTGGAT+TGG + chr3_3:44562116-44562135 None:intergenic 35.0%
!!! GACTTTATTTTGGGTCTCTT+TGG + chr3_3:44562121-44562140 None:intergenic 35.0%
GCTGTTATGAATTCTGAACA+TGG + chr3_3:44562467-44562486 None:intergenic 35.0%
AAACAAGGACACCATGAATA+CGG + chr3_3:44562539-44562558 None:intergenic 35.0%
CACCCAAACTCATATAAACA+AGG + chr3_3:44562554-44562573 None:intergenic 35.0%
CTTGTTTATATGAGTTTGGG+TGG - chr3_3:44562552-44562571 Msa0453750:intron 35.0%
!! TTTGGGTGGGTTAAATATAC+CGG - chr3_3:44562566-44562585 Msa0453750:intron 35.0%
GGTTAAATATACCGGATTAC+TGG - chr3_3:44562574-44562593 Msa0453750:intron 35.0%
AAACAATTCACCCAGTAATC+CGG + chr3_3:44562588-44562607 None:intergenic 35.0%
! GTGAGAATACAATTTTCTGG+GGG + chr3_3:44562719-44562738 None:intergenic 35.0%
TAGAAACTGGTGCAAAACAT+AGG - chr3_3:44562754-44562773 Msa0453750:intron 35.0%
ATAATAATCTCGCACGCTTT+AGG + chr3_3:44562943-44562962 None:intergenic 35.0%
TGTAGATTCCGTTACAAAGA+TGG - chr3_3:44563088-44563107 Msa0453750:intron 35.0%
GTAGATTCCGTTACAAAGAT+GGG - chr3_3:44563089-44563108 Msa0453750:intron 35.0%
GATGCAATTGGATAATTCAG+TGG - chr3_3:44563132-44563151 Msa0453750:intron 35.0%
TCCTACATCTGAAAATATGC+TGG - chr3_3:44563174-44563193 Msa0453750:intron 35.0%
! ACCAGCATATTTTCAGATGT+AGG + chr3_3:44563178-44563197 None:intergenic 35.0%
!!! TGACGAACTGTTGATTTTTC+AGG + chr3_3:44563301-44563320 None:intergenic 35.0%
GGTAAAAGTAAAGGGTAATG+AGG + chr3_3:44563461-44563480 None:intergenic 35.0%
!!! CATTTTCCTTTTTTGGTGTG+GGG + chr3_3:44563482-44563501 None:intergenic 35.0%
!!! GCTTTTGGGATAGTTATTCA+CGG - chr3_3:44563592-44563611 Msa0453750:intron 35.0%
GAATTTACGCACAATATAGG+CGG - chr3_3:44563675-44563694 Msa0453750:intron 35.0%
!! GCGGTCTTATTGAAATTCAA+AGG - chr3_3:44563694-44563713 Msa0453750:intron 35.0%
ACCAATATCTTGCTGACAAT+TGG - chr3_3:44564015-44564034 Msa0453750:intron 35.0%
TCCAATTGTCAGCAAGATAT+TGG + chr3_3:44564019-44564038 None:intergenic 35.0%
GTCAAAGTAGGTTATGTGAA+TGG - chr3_3:44564597-44564616 Msa0453750:intron 35.0%
CCAAGAATAGTTCATTGATG+GGG + chr3_3:44564798-44564817 None:intergenic 35.0%
GCCAAGAATAGTTCATTGAT+GGG + chr3_3:44564799-44564818 None:intergenic 35.0%
AGCCAAGAATAGTTCATTGA+TGG + chr3_3:44564800-44564819 None:intergenic 35.0%
GAAAACTCTTTATTGTGCCA+TGG - chr3_3:44564836-44564855 Msa0453750:intron 35.0%
TTCGGTCATATATGTTGTCA+AGG - chr3_3:44564905-44564924 Msa0453750:intron 35.0%
AAGGTAATTAATGGCAGATG+AGG + chr3_3:44564943-44564962 None:intergenic 35.0%
TTCGGTCATATATGTTGTCA+AGG - chr3_3:44564905-44564924 Msa0453750:intron 35.0%
AAGGTAATTAATGGCAGATG+AGG + chr3_3:44564943-44564962 None:intergenic 35.0%
! TTACAACAACGATGTCGATT+TGG - chr3_3:44565372-44565391 Msa0453750:intron 35.0%
ATCTATTAGCAGCTTACCAT+GGG + chr3_3:44565415-44565434 None:intergenic 35.0%
AATCTATTAGCAGCTTACCA+TGG + chr3_3:44565416-44565435 None:intergenic 35.0%
GTAAGCTGCTAATAGATTAG+AGG - chr3_3:44565418-44565437 Msa0453750:intron 35.0%
GCAGATATTCGATGAGTATA+TGG - chr3_3:44565509-44565528 Msa0453750:intron 35.0%
TGTGTACTTGAATCTATAGG+AGG - chr3_3:44565739-44565758 Msa0453750:CDS 35.0%
GTGTACTTGAATCTATAGGA+GGG - chr3_3:44565740-44565759 Msa0453750:CDS 35.0%
TGTACTTGAATCTATAGGAG+GGG - chr3_3:44565741-44565760 Msa0453750:CDS 35.0%
TTCAATGTTTGTGGCATTAG+GGG - chr3_3:44565857-44565876 Msa0453750:CDS 35.0%
GTGAAATGTTTCACTCATTC+AGG - chr3_3:44565879-44565898 Msa0453750:CDS 35.0%
AGGTGGCCAAAAATAAAGAA+GGG + chr3_3:44565997-44566016 None:intergenic 35.0%
CTCAACTGGATTTCTAATCT+TGG - chr3_3:44566022-44566041 Msa0453750:intron 35.0%
CTGGATTTCTAATCTTGGTT+TGG - chr3_3:44566027-44566046 Msa0453750:intron 35.0%
TTTATGCCTGTTGAGGTTAT+AGG - chr3_3:44566109-44566128 Msa0453750:intron 35.0%
TGAAATCCTATAACCTCAAC+AGG + chr3_3:44566118-44566137 None:intergenic 35.0%
GATTGAGGATACATAAGACT+TGG - chr3_3:44566194-44566213 Msa0453750:intron 35.0%
CAAGCAGATGCTATAACTAT+AGG + chr3_3:44566378-44566397 None:intergenic 35.0%
TAGTTATAGCATCTGCTTGT+TGG - chr3_3:44566379-44566398 Msa0453750:intron 35.0%
TTAGAACAATCCGATTACAG+CGG - chr3_3:44566730-44566749 Msa0453750:intron 35.0%
GATAGTACCAACTTACAGAA+AGG - chr3_3:44566790-44566809 Msa0453750:intron 35.0%
TTGAACACCTTTCTGTAAGT+TGG + chr3_3:44566800-44566819 None:intergenic 35.0%
! TTCCAAAATGATGGCGAATA+TGG - chr3_3:44566870-44566889 Msa0453750:intron 35.0%
! TCCAAAATGATGGCGAATAT+GGG - chr3_3:44566871-44566890 Msa0453750:intron 35.0%
AGACTTAAGTGCATGATCTA+AGG + chr3_3:44566980-44566999 None:intergenic 35.0%
TTGAGAAGCAAAGGAAGAAA+CGG - chr3_3:44567019-44567038 Msa0453750:intron 35.0%
! CGATTCTTCTTCTTCTTTTG+CGG + chr3_3:44567097-44567116 None:intergenic 35.0%
CGCAAAAGAAGAAGAAGAAT+CGG - chr3_3:44567095-44567114 Msa0453750:intron 35.0%
TTTATTAGCGAGAAGACATC+TGG + chr3_3:44567123-44567142 None:intergenic 35.0%
CTTCTTCATTGATCCATTGT+TGG + chr3_3:44567175-44567194 None:intergenic 35.0%
ATGAAGAAGCAGCAAACTAA+AGG - chr3_3:44567186-44567205 Msa0453750:intron 35.0%
TGCTTATGAGAATGATGTGA+AGG - chr3_3:44567248-44567267 Msa0453750:intron 35.0%
TTCATAGCAGCATCATAAAC+AGG + chr3_3:44567333-44567352 None:intergenic 35.0%
TTTGCTAACAACATCATCTG+AGG + chr3_3:44567412-44567431 None:intergenic 35.0%
AAACCAAGCAAGCAAACTTA+CGG + chr3_3:44567770-44567789 None:intergenic 35.0%
TGCTTGGTTTACTGTATGTT+TGG - chr3_3:44567780-44567799 Msa0453750:CDS 35.0%
GCTTGGTTTACTGTATGTTT+GGG - chr3_3:44567781-44567800 Msa0453750:CDS 35.0%
CTCGTTGTAGACATTACATA+GGG - chr3_3:44567923-44567942 Msa0453750:five_prime_UTR 35.0%
!!! GAAGTTCCAGTTGGTTTTCA+AGG + chr3_3:44560959-44560978 None:intergenic 40.0%
! GAGATGTCATTTGTGAAGCA+TGG + chr3_3:44561304-44561323 None:intergenic 40.0%
! TCTCTAGAAGTGGAACCTTT+AGG - chr3_3:44561320-44561339 Msa0453750:three_prime_UTR 40.0%
! CTCTAGAAGTGGAACCTTTA+GGG - chr3_3:44561321-44561340 Msa0453750:three_prime_UTR 40.0%
GTTTATTGCTGTGCCACATT+AGG - chr3_3:44561343-44561362 Msa0453750:three_prime_UTR 40.0%
ACAACTTTGCCCAAAAGTCT+GGG + chr3_3:44561514-44561533 None:intergenic 40.0%
!! CGAATTATGTTGGCTCAGTT+TGG - chr3_3:44561535-44561554 Msa0453750:CDS 40.0%
ATAAAAGATATAGGCCCGGT+TGG - chr3_3:44561625-44561644 Msa0453750:CDS 40.0%
TAAAAGATATAGGCCCGGTT+GGG - chr3_3:44561626-44561645 Msa0453750:CDS 40.0%
AATAAGCTCCTTATCCCAAC+CGG + chr3_3:44561643-44561662 None:intergenic 40.0%
! GGATGCAATTTTCGTTAGTG+AGG + chr3_3:44561758-44561777 None:intergenic 40.0%
TAAGCCAATCCAAATAGCCT+TGG - chr3_3:44562284-44562303 Msa0453750:CDS 40.0%
GTAACCAAGGCTATTTGGAT+TGG + chr3_3:44562291-44562310 None:intergenic 40.0%
TGAGTGTAACCAAGGCTATT+TGG + chr3_3:44562296-44562315 None:intergenic 40.0%
TCTGCTATTGAGTGTAACCA+AGG + chr3_3:44562304-44562323 None:intergenic 40.0%
AATAGCAGAGTTGTGTTTGC+TGG - chr3_3:44562315-44562334 Msa0453750:CDS 40.0%
GGAAGGAAGACAATTTCGAA+AGG - chr3_3:44562336-44562355 Msa0453750:CDS 40.0%
! TCAGTCAGCTAAGCTAGTTT+AGG - chr3_3:44562395-44562414 Msa0453750:intron 40.0%
TTCAACAACAGCATGTTGGT+GGG + chr3_3:44562626-44562645 None:intergenic 40.0%
ATTCAACAACAGCATGTTGG+TGG + chr3_3:44562627-44562646 None:intergenic 40.0%
GGGATTGAGATTGTAGAAAC+TGG - chr3_3:44562741-44562760 Msa0453750:intron 40.0%
TAGGTTCGATTGATATGGCT+TGG - chr3_3:44562773-44562792 Msa0453750:intron 40.0%
! GGAACTTGTTCAGGCAATTA+AGG - chr3_3:44562895-44562914 Msa0453750:intron 40.0%
ACCAATGCCCATCTTTGTAA+CGG + chr3_3:44563099-44563118 None:intergenic 40.0%
!! AAAGATGGGCATTGGTACAA+TGG - chr3_3:44563103-44563122 Msa0453750:intron 40.0%
CAATGGTCAAGTGATGCAAT+TGG - chr3_3:44563120-44563139 Msa0453750:intron 40.0%
AAATAGGCAACACAGGCATA+TGG - chr3_3:44563357-44563376 Msa0453750:intron 40.0%
! GTAAAGGGTAATGAGGGTAT+TGG + chr3_3:44563454-44563473 None:intergenic 40.0%
TGGTGTGGGGTAAAAGTAAA+GGG + chr3_3:44563469-44563488 None:intergenic 40.0%
TTGGTGTGGGGTAAAAGTAA+AGG + chr3_3:44563470-44563489 None:intergenic 40.0%
! CTTTTACCCCACACCAAAAA+AGG - chr3_3:44563473-44563492 Msa0453750:intron 40.0%
TTCATGTGTTAAGTCCTCAC+AGG - chr3_3:44563565-44563584 Msa0453750:intron 40.0%
!!! TCCTCACAGGTTTAGCTTTT+GGG - chr3_3:44563578-44563597 Msa0453750:intron 40.0%
TGGGATAGTTATTCACGGTA+TGG - chr3_3:44563597-44563616 Msa0453750:intron 40.0%
GTGTCAGAGTTTCAAGAGTT+GGG + chr3_3:44564263-44564282 None:intergenic 40.0%
TGTGTCAGAGTTTCAAGAGT+TGG + chr3_3:44564264-44564283 None:intergenic 40.0%
GATGCTTAAAAAGGAACGGA+GGG + chr3_3:44564409-44564428 None:intergenic 40.0%
! GTGCATTGACATGTATGAAG+TGG + chr3_3:44564440-44564459 None:intergenic 40.0%
TCAAACGTCGACCCTTAAAA+AGG - chr3_3:44564629-44564648 Msa0453750:intron 40.0%
GACCCTTAAAAAGGAACAGA+GGG - chr3_3:44564638-44564657 Msa0453750:intron 40.0%
! CTCCCTCTGTTCCTTTTTAA+GGG + chr3_3:44564643-44564662 None:intergenic 40.0%
! ACTCCCTCTGTTCCTTTTTA+AGG + chr3_3:44564644-44564663 None:intergenic 40.0%
TAGTTCATTGATGGGGTGAT+TGG + chr3_3:44564791-44564810 None:intergenic 40.0%
CCCCATCAATGAACTATTCT+TGG - chr3_3:44564795-44564814 Msa0453750:intron 40.0%
! TGAAAGAGCTGATTTCAACG+AGG + chr3_3:44565458-44565477 None:intergenic 40.0%
GTACTTGAATCTATAGGAGG+GGG - chr3_3:44565742-44565761 Msa0453750:CDS 40.0%
GGTGGCCAAAAATAAAGAAG+GGG + chr3_3:44565996-44566015 None:intergenic 40.0%
GAGGTGGCCAAAAATAAAGA+AGG + chr3_3:44565998-44566017 None:intergenic 40.0%
AGAAATCCAGTTGAGAGAAG+AGG + chr3_3:44566017-44566036 None:intergenic 40.0%
TGGTGTATTAGGATCACATG+CGG + chr3_3:44566059-44566078 None:intergenic 40.0%
!!! TTGCTGTTTTATGCCTGTTG+AGG - chr3_3:44566102-44566121 Msa0453750:intron 40.0%
AGGAATATGCCCCAACAATT+TGG - chr3_3:44566500-44566519 Msa0453750:intron 40.0%
CAAATGCAAATGCAGGCATT+TGG - chr3_3:44566560-44566579 Msa0453750:intron 40.0%
TCACAGAACTTCCATCATCT+CGG + chr3_3:44566642-44566661 None:intergenic 40.0%
! GTAATCGGATTGTTCTAAGC+TGG + chr3_3:44566728-44566747 None:intergenic 40.0%
! ACCACAGGGTTTAGGATTTA+TGG - chr3_3:44566768-44566787 Msa0453750:intron 40.0%
TCCATAAATCCTAAACCCTG+TGG + chr3_3:44566772-44566791 None:intergenic 40.0%
! ACCCATATTCGCCATCATTT+TGG + chr3_3:44566875-44566894 None:intergenic 40.0%
! TATGGGTTACCAAGAAGGAA+TGG - chr3_3:44566888-44566907 Msa0453750:intron 40.0%
! ATGGGTTACCAAGAAGGAAT+GGG - chr3_3:44566889-44566908 Msa0453750:intron 40.0%
! TACCAAGAAGGAATGGGTTT+AGG - chr3_3:44566895-44566914 Msa0453750:intron 40.0%
AAGGGAACATTGAGAAGCAA+AGG - chr3_3:44567010-44567029 Msa0453750:intron 40.0%
AAGCAGCAAACTAAAGGTTC+AGG - chr3_3:44567192-44567211 Msa0453750:intron 40.0%
CAAACTAAAGGTTCAGGTGA+AGG - chr3_3:44567198-44567217 Msa0453750:intron 40.0%
AGGTTCAGGTGAAGGTAAAA+AGG - chr3_3:44567206-44567225 Msa0453750:intron 40.0%
TTCAGGTGAAGGTAAAAAGG+TGG - chr3_3:44567209-44567228 Msa0453750:intron 40.0%
! TGTGAAGGATTTGAAAGTGC+AGG - chr3_3:44567263-44567282 Msa0453750:intron 40.0%
AAAATTAGTCCAAACCCGCA+AGG - chr3_3:44567353-44567372 Msa0453750:intron 40.0%
CAAGATTTACAACTTGGACG+CGG + chr3_3:44567861-44567880 None:intergenic 40.0%
TGCACTGAAATTATGTGACC+AGG - chr3_3:44567896-44567915 Msa0453750:exon 40.0%
GCTCGTTGTAGACATTACAT+AGG - chr3_3:44567922-44567941 Msa0453750:five_prime_UTR 40.0%
ATTGTGAGGTGGAACGAGAA+TGG - chr3_3:44560914-44560933 Msa0453750:three_prime_UTR 45.0%
TTGTGAGGTGGAACGAGAAT+GGG - chr3_3:44560915-44560934 Msa0453750:three_prime_UTR 45.0%
GAGAGTCCTTGAAAACCAAC+TGG - chr3_3:44560950-44560969 Msa0453750:three_prime_UTR 45.0%
GTTCGGAATTGGTTGGATCA+AGG + chr3_3:44561031-44561050 None:intergenic 45.0%
TGAAGATACCTCGAGGAGTT+CGG + chr3_3:44561048-44561067 None:intergenic 45.0%
TGACATATGAAGCACGGACA+CGG - chr3_3:44561230-44561249 Msa0453750:intron 45.0%
TGTGAAGCATGGACACTTCT+CGG + chr3_3:44561293-44561312 None:intergenic 45.0%
GGCACAGCAATAAACCCTAA+AGG + chr3_3:44561338-44561357 None:intergenic 45.0%
CAATCAAAGCATAGGGTCTC+TGG - chr3_3:44561380-44561399 Msa0453750:CDS 45.0%
AACTTTGCCCAAAAGTCTGG+GGG + chr3_3:44561512-44561531 None:intergenic 45.0%
CAACTTTGCCCAAAAGTCTG+GGG + chr3_3:44561513-44561532 None:intergenic 45.0%
CACAACTTTGCCCAAAAGTC+TGG + chr3_3:44561515-44561534 None:intergenic 45.0%
ATAAGCTCCTTATCCCAACC+GGG + chr3_3:44561642-44561661 None:intergenic 45.0%
ATACACACTTAGGGCCTGTT+TGG - chr3_3:44561676-44561695 Msa0453750:CDS 45.0%
ATGATAAGTAAGGGCCCGTT+TGG + chr3_3:44561886-44561905 None:intergenic 45.0%
! GTCAGCTAAGCTAGTTTAGG+TGG - chr3_3:44562398-44562417 Msa0453750:intron 45.0%
AACAAGTTCCTCGTGAACCT+GGG + chr3_3:44562885-44562904 None:intergenic 45.0%
TAGGTGAAGAAGTCCTTCCT+CGG + chr3_3:44562924-44562943 None:intergenic 45.0%
TCAACATCTGCAGGATCAAG+TGG + chr3_3:44563025-44563044 None:intergenic 45.0%
!!! CTTTTTTCTTCTAGCGGCTC+TGG + chr3_3:44563049-44563068 None:intergenic 45.0%
TCCGTTACAAAGATGGGCAT+TGG - chr3_3:44563095-44563114 Msa0453750:intron 45.0%
GAAGGGAAAATAGGCAACAC+AGG - chr3_3:44563350-44563369 Msa0453750:intron 45.0%
!!! GTCCTCACAGGTTTAGCTTT+TGG - chr3_3:44563577-44563596 Msa0453750:intron 45.0%
TCCCAAAAGCTAAACCTGTG+AGG + chr3_3:44563582-44563601 None:intergenic 45.0%
ATGCTACAATCGTGCAGCTT+AGG - chr3_3:44564096-44564115 Msa0453750:intron 45.0%
TGCTACAATCGTGCAGCTTA+GGG - chr3_3:44564097-44564116 Msa0453750:intron 45.0%
GAGTTTCAAGAGTTGGGTCA+GGG + chr3_3:44564257-44564276 None:intergenic 45.0%
AGAGTTTCAAGAGTTGGGTC+AGG + chr3_3:44564258-44564277 None:intergenic 45.0%
CGATGCTTAAAAAGGAACGG+AGG + chr3_3:44564410-44564429 None:intergenic 45.0%
GGTTATGTGAATGGTGCACA+TGG - chr3_3:44564606-44564625 Msa0453750:intron 45.0%
CGACCCTTAAAAAGGAACAG+AGG - chr3_3:44564637-44564656 Msa0453750:intron 45.0%
GAACTTGCACATCTGCACTT+TGG + chr3_3:44565349-44565368 None:intergenic 45.0%
TTAGCAGCTTACCATGGGAT+AGG + chr3_3:44565410-44565429 None:intergenic 45.0%
! GTTCATTGCGGGCTATTTGT+TGG - chr3_3:44565801-44565820 Msa0453750:CDS 45.0%
AATCCAGTTGAGAGAAGAGG+TGG + chr3_3:44566014-44566033 None:intergenic 45.0%
! TGTTCAACTGACTTCCCTCA+AGG - chr3_3:44566480-44566499 Msa0453750:intron 45.0%
TGTTGGGGCATATTCCTTGA+GGG + chr3_3:44566497-44566516 None:intergenic 45.0%
TTGTTGGGGCATATTCCTTG+AGG + chr3_3:44566498-44566517 None:intergenic 45.0%
CCATATACTTGACCCAGCAA+GGG + chr3_3:44566533-44566552 None:intergenic 45.0%
CCTTGCTGGGTCAAGTATAT+GGG - chr3_3:44566531-44566550 Msa0453750:intron 45.0%
GCAGTCTCAAATGCAAATGC+AGG - chr3_3:44566553-44566572 Msa0453750:intron 45.0%
AAAAGCTGGAGTTGGACAAG+TGG - chr3_3:44566612-44566631 Msa0453750:intron 45.0%
! CAAGTGGTTTTCCGAGATGA+TGG - chr3_3:44566628-44566647 Msa0453750:intron 45.0%
GATGGAAGTTCTGTGAAGCT+TGG - chr3_3:44566646-44566665 Msa0453750:intron 45.0%
!! GAAGCTTGGTGCACAAGATA+TGG - chr3_3:44566660-44566679 Msa0453750:intron 45.0%
AGGCATGGCTTCCAAAATGA+TGG - chr3_3:44566861-44566880 Msa0453750:intron 45.0%
! GCGAATATGGGTTACCAAGA+AGG - chr3_3:44566883-44566902 Msa0453750:intron 45.0%
AGCCTAAACCCATTCCTTCT+TGG + chr3_3:44566900-44566919 None:intergenic 45.0%
! GGAATGGGTTTAGGCTTAAC+TGG - chr3_3:44566904-44566923 Msa0453750:intron 45.0%
GGTTTAGGCTTAACTGGTCA+GGG - chr3_3:44566910-44566929 Msa0453750:intron 45.0%
GGTAGAACCTTCACTGGTAT+GGG + chr3_3:44566946-44566965 None:intergenic 45.0%
TGGTAGAACCTTCACTGGTA+TGG + chr3_3:44566947-44566966 None:intergenic 45.0%
TTAGGTGGTAGAACCTTCAC+TGG + chr3_3:44566952-44566971 None:intergenic 45.0%
TGATCTAAGGACTGCTTAGG+TGG + chr3_3:44566967-44566986 None:intergenic 45.0%
GCATGATCTAAGGACTGCTT+AGG + chr3_3:44566970-44566989 None:intergenic 45.0%
CCAGAGGTGGTAAGAGAAAA+CGG - chr3_3:44567043-44567062 Msa0453750:intron 45.0%
CAGAGGTGGTAAGAGAAAAC+GGG - chr3_3:44567044-44567063 Msa0453750:intron 45.0%
AACACTCAACTAGCCATGCA+CGG - chr3_3:44567141-44567160 Msa0453750:intron 45.0%
! AACAACATCATCTGAGGCAG+AGG + chr3_3:44567406-44567425 None:intergenic 45.0%
! TCAAAGCATCTGCCTGCATA+AGG + chr3_3:44567524-44567543 None:intergenic 45.0%
TGACCACTCAGGTGAAAGAA+GGG + chr3_3:44567727-44567746 None:intergenic 45.0%
! AAGCCGTAAGTTTGCTTGCT+TGG - chr3_3:44567764-44567783 Msa0453750:intron 45.0%
ATGTCTACAACGAGCAATCC+TGG + chr3_3:44567917-44567936 None:intergenic 45.0%
!! TATAACAAATAAAAAAAATA+AGG - chr3_3:44563272-44563291 Msa0453750:intron 5.0%
!! ATAACAAATAAAAAAAATAA+GGG - chr3_3:44563273-44563292 Msa0453750:intron 5.0%
!!! ATATAAACTTTTATAATTTT+TGG + chr3_3:44564497-44564516 None:intergenic 5.0%
TCGAGGAGTTCGGAATTGGT+TGG + chr3_3:44561038-44561057 None:intergenic 50.0%
AACCAATTCCGAACTCCTCG+AGG - chr3_3:44561037-44561056 Msa0453750:three_prime_UTR 50.0%
TACCTCGAGGAGTTCGGAAT+TGG + chr3_3:44561042-44561061 None:intergenic 50.0%
GACATATGAAGCACGGACAC+GGG - chr3_3:44561231-44561250 Msa0453750:intron 50.0%
GCATGGACACTTCTCGGATT+AGG + chr3_3:44561287-44561306 None:intergenic 50.0%
! ACCATTGCCCCCAGACTTTT+GGG - chr3_3:44561502-44561521 Msa0453750:CDS 50.0%
ATATAGGCCCGGTTGGGATA+AGG - chr3_3:44561632-44561651 Msa0453750:CDS 50.0%
AGTAAGGGCCCGTTTGGATT+AGG + chr3_3:44561880-44561899 None:intergenic 50.0%
! GCAGAGTTGTGTTTGCTGGA+AGG - chr3_3:44562319-44562338 Msa0453750:CDS 50.0%
TTCGATATCCCAGGTTCACG+AGG - chr3_3:44562874-44562893 Msa0453750:intron 50.0%
GAACAAGTTCCTCGTGAACC+TGG + chr3_3:44562886-44562905 None:intergenic 50.0%
! GGTTCACGAGGAACTTGTTC+AGG - chr3_3:44562886-44562905 Msa0453750:intron 50.0%
TCAGGCAATTAAGGATGCCG+AGG - chr3_3:44562904-44562923 Msa0453750:intron 50.0%
GCAATTAAGGATGCCGAGGA+AGG - chr3_3:44562908-44562927 Msa0453750:intron 50.0%
TCAAAGGGTTCTTGTGCGAG+TGG - chr3_3:44563710-44563729 Msa0453750:intron 50.0%
CAAAGGGTTCTTGTGCGAGT+GGG - chr3_3:44563711-44563730 Msa0453750:intron 50.0%
GCTACAATCGTGCAGCTTAG+GGG - chr3_3:44564098-44564117 Msa0453750:intron 50.0%
AAGAGTTGGGTCAGGGACTT+AGG + chr3_3:44564250-44564269 None:intergenic 50.0%
AGTAACTGTCGCCTATCCCA+TGG - chr3_3:44565396-44565415 Msa0453750:intron 50.0%
GGACGGCTTCCAAATTGTTG+GGG + chr3_3:44566512-44566531 None:intergenic 50.0%
GGGACGGCTTCCAAATTGTT+GGG + chr3_3:44566513-44566532 None:intergenic 50.0%
AGGGACGGCTTCCAAATTGT+TGG + chr3_3:44566514-44566533 None:intergenic 50.0%
ATACTTGACCCAGCAAGGGA+CGG + chr3_3:44566529-44566548 None:intergenic 50.0%
CCCTTGCTGGGTCAAGTATA+TGG - chr3_3:44566530-44566549 Msa0453750:intron 50.0%
CCCATATACTTGACCCAGCA+AGG + chr3_3:44566534-44566553 None:intergenic 50.0%
GAGTCATGGGACGAAAAAGC+TGG - chr3_3:44566598-44566617 Msa0453750:intron 50.0%
TGGGACGAAAAAGCTGGAGT+TGG - chr3_3:44566604-44566623 Msa0453750:intron 50.0%
TTCCTCTGAGCCGCTGTAAT+CGG + chr3_3:44566743-44566762 None:intergenic 50.0%
TCAGAGGAAGAGGAACCACA+GGG - chr3_3:44566754-44566773 Msa0453750:intron 50.0%
GAAGAGGAACCACAGGGTTT+AGG - chr3_3:44566760-44566779 Msa0453750:intron 50.0%
AAGTGGGAGAACCATACCAG+AGG - chr3_3:44566841-44566860 Msa0453750:intron 50.0%
!! CATTTTGGAAGCCATGCCTC+TGG + chr3_3:44566860-44566879 None:intergenic 50.0%
GGGTTTAGGCTTAACTGGTC+AGG - chr3_3:44566909-44566928 Msa0453750:intron 50.0%
AGGCTTAACTGGTCAGGGTA+TGG - chr3_3:44566915-44566934 Msa0453750:intron 50.0%
GGTTGATCCCATACCAGTGA+AGG - chr3_3:44566936-44566955 Msa0453750:intron 50.0%
CAAAGGAAGAAACGGACCAG+AGG - chr3_3:44567027-44567046 Msa0453750:intron 50.0%
! CCGTTTTCTCTTACCACCTC+TGG + chr3_3:44567046-44567065 None:intergenic 50.0%
ACCACTCAGGTGAAAGAAGG+GGG + chr3_3:44567725-44567744 None:intergenic 50.0%
GACCACTCAGGTGAAAGAAG+GGG + chr3_3:44567726-44567745 None:intergenic 50.0%
CTGACCACTCAGGTGAAAGA+AGG + chr3_3:44567728-44567747 None:intergenic 50.0%
CAGTGTAATGCTGACCACTC+AGG + chr3_3:44567738-44567757 None:intergenic 50.0%
! CACCATTGCCCCCAGACTTT+TGG - chr3_3:44561501-44561520 Msa0453750:CDS 55.0%
! CAACAGCATGTTGGTGGGTC+AGG + chr3_3:44562621-44562640 None:intergenic 55.0%
! GGCTCTGGTTCAACATCTGC+AGG + chr3_3:44563034-44563053 None:intergenic 55.0%
AGTTGGGTCAGGGACTTAGG+AGG + chr3_3:44564247-44564266 None:intergenic 55.0%
TGGCCACCTCTTCTCTCAAC+TGG - chr3_3:44566008-44566027 Msa0453750:intron 55.0%
ATTTGGAAGCCGTCCCTTGC+TGG - chr3_3:44566517-44566536 Msa0453750:intron 55.0%
TTTGGAAGCCGTCCCTTGCT+GGG - chr3_3:44566518-44566537 Msa0453750:intron 55.0%
TTCGTCCCATGACTCGAGCT+CGG + chr3_3:44566593-44566612 None:intergenic 55.0%
ATCCGATTACAGCGGCTCAG+AGG - chr3_3:44566738-44566757 Msa0453750:intron 55.0%
TTACAGCGGCTCAGAGGAAG+AGG - chr3_3:44566744-44566763 Msa0453750:intron 55.0%
CTCAGAGGAAGAGGAACCAC+AGG - chr3_3:44566753-44566772 Msa0453750:intron 55.0%
GGAGAACCATACCAGAGGCA+TGG - chr3_3:44566846-44566865 Msa0453750:intron 55.0%
TGGAAGCCATGCCTCTGGTA+TGG + chr3_3:44566855-44566874 None:intergenic 55.0%
AGGAAGAAACGGACCAGAGG+TGG - chr3_3:44567030-44567049 Msa0453750:intron 55.0%
CACGGCGAAGCTTCCAACAA+TGG - chr3_3:44567159-44567178 Msa0453750:intron 55.0%
AGTCCAAACCCGCAAGGCAT+TGG - chr3_3:44567359-44567378 Msa0453750:intron 55.0%
CACTCAGGTGAAAGAAGGGG+GGG + chr3_3:44567723-44567742 None:intergenic 55.0%
CCACTCAGGTGAAAGAAGGG+GGG + chr3_3:44567724-44567743 None:intergenic 55.0%
CACCGACGCGTGTCTGACAT+CGG - chr3_3:44561255-44561274 Msa0453750:intron 60.0%
ACCGACGCGTGTCTGACATC+GGG - chr3_3:44561256-44561275 Msa0453750:three_prime_UTR 60.0%
GCCCAAAAGTCTGGGGGCAA+TGG + chr3_3:44561506-44561525 None:intergenic 60.0%
! ATGTTGGTGGGTCAGGCTGG+GGG + chr3_3:44562614-44562633 None:intergenic 60.0%
! CATGTTGGTGGGTCAGGCTG+GGG + chr3_3:44562615-44562634 None:intergenic 60.0%
! GCATGTTGGTGGGTCAGGCT+GGG + chr3_3:44562616-44562635 None:intergenic 60.0%
! AGCATGTTGGTGGGTCAGGC+TGG + chr3_3:44562617-44562636 None:intergenic 60.0%
GCGCAGCACTGTGTCTGCTT+CGG + chr3_3:44562966-44562985 None:intergenic 60.0%
AGCAGCCGAGCTCGAGTCAT+GGG - chr3_3:44566585-44566604 Msa0453750:intron 60.0%
GTTGGAAGCTTCGCCGTGCA+TGG + chr3_3:44567157-44567176 None:intergenic 60.0%
CAGCCAATGCCTTGCGGGTT+TGG + chr3_3:44567365-44567384 None:intergenic 60.0%
!! AACCCGCAAGGCATTGGCTG+AGG - chr3_3:44567365-44567384 Msa0453750:intron 60.0%
AGCCTCAGCCAATGCCTTGC+GGG + chr3_3:44567370-44567389 None:intergenic 60.0%
CAGCCTCAGCCAATGCCTTG+CGG + chr3_3:44567371-44567390 None:intergenic 60.0%
CCCCCCTTCTTTCACCTGAG+TGG - chr3_3:44567721-44567740 Msa0453750:intron 60.0%
CCCCGATGTCAGACACGCGT+CGG + chr3_3:44561260-44561279 None:intergenic 65.0%
CCGACGCGTGTCTGACATCG+GGG - chr3_3:44561257-44561276 Msa0453750:three_prime_UTR 65.0%
GAGCAGCCGAGCTCGAGTCA+TGG - chr3_3:44566584-44566603 Msa0453750:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 44560875 44567963 44560875 ID=Msa0453750;Name=Msa0453750
chr3_3 mRNA 44560875 44567963 44560875 ID=Msa0453750-mRNA-1;Parent=Msa0453750;Name=Msa0453750-mRNA-1;_AED=0.02;_eAED=0.02;_QI=58|1|1|1|0.25|0.4|5|402|494
chr3_3 exon 44560875 44561155 44560875 ID=Msa0453750-mRNA-1:exon:8160;Parent=Msa0453750-mRNA-1
chr3_3 exon 44561256 44562365 44561256 ID=Msa0453750-mRNA-1:exon:8159;Parent=Msa0453750-mRNA-1
chr3_3 exon 44563421 44563481 44563421 ID=Msa0453750-mRNA-1:exon:8158;Parent=Msa0453750-mRNA-1
chr3_3 exon 44565643 44565951 44565643 ID=Msa0453750-mRNA-1:exon:8157;Parent=Msa0453750-mRNA-1
chr3_3 exon 44567780 44567963 44567780 ID=Msa0453750-mRNA-1:exon:8156;Parent=Msa0453750-mRNA-1
chr3_3 five_prime_UTR 44567906 44567963 44567906 ID=Msa0453750-mRNA-1:five_prime_utr;Parent=Msa0453750-mRNA-1
chr3_3 CDS 44567780 44567905 44567780 ID=Msa0453750-mRNA-1:cds;Parent=Msa0453750-mRNA-1
chr3_3 CDS 44565643 44565951 44565643 ID=Msa0453750-mRNA-1:cds;Parent=Msa0453750-mRNA-1
chr3_3 CDS 44563421 44563481 44563421 ID=Msa0453750-mRNA-1:cds;Parent=Msa0453750-mRNA-1
chr3_3 CDS 44561377 44562365 44561377 ID=Msa0453750-mRNA-1:cds;Parent=Msa0453750-mRNA-1
chr3_3 three_prime_UTR 44561256 44561376 44561256 ID=Msa0453750-mRNA-1:three_prime_utr;Parent=Msa0453750-mRNA-1
chr3_3 three_prime_UTR 44560875 44561155 44560875 ID=Msa0453750-mRNA-1:three_prime_utr;Parent=Msa0453750-mRNA-1
Gene Sequence

>Msa0453750

ATGGGTAGCGAAGAAGAGAGAGTCCTTGAAAACCAACTGGAACTTCAATTACATGAACAAAGAGATTCTCTCACTGCTATCGATCATGCTCTTCTCCTTGATCCAACCAATTCCGAACTCCTCGAGGTTCACGAGGAACTTGTTCAGGCAATTAAGGATGCCGAGGAAGGACTTCTTCACCTAAAGCGTGCGAGATTATTATCCGAAGCAGACACAGTGCTGCGCAGTACTGATATTTTTGCTGAAGAAAAGAAAGTGGAGCCACTTGATCCTGCAGATGTTGAACCAGAGCCGCTAGAAGAAAAAAGCTTTTCTGTTGGATCTAAATGTAGATTCCGTTACAAAGATGGGCATTGGTACAATGGTCAAGTGATGCAATTGGATAATTCAGTGGCGAAGATTTCATTTCTTACTCCTACATCTGAAAATATGCTGATGTGCAAGTTCTTTTTACAACAACGATGTCGATTTGGTAGTAACTGTCGCCTATCCCATGGAGTTGATGTTCAACTGACTTCCCTCAAGGAATATGCCCCAACAATTTGGAAGCCGTCCCTTGCTGGGTCAAGTATATGGGCAGTCTCAAATGCAAATGCAGGCATTTGGAGAGCAGCCGAGCTCGAGTCATGGGACGAAAAAGCTGGAGTTGGACAAGTGGTTTTCCGAGATGATGGAAGTTCTGTGAAGCTTGGTGCACAAGATATGGTATTATCTGAGTATGCAGATATGAGTGACATAGATAGTGATTCCAGCTTAGAACAATCCGATTACAGCGGCTCAGAGGAAGAGGAACCACAGGGTTTAGGATTTATGGATAGTACCAACTTACAGAAAGGTGTTCAAACCGAAACTGCTATATTTGCAAAGTGGGAGAACCATACCAGAGGCATGGCTTCCAAAATGATGGCGAATATGGGTTACCAAGAAGGAATGGGTTTAGGCTTAACTGGTCAGGGTATGGTTGATCCCATACCAGTGAAGGTTCTACCACCTAAGCAGTCCTTAGATCATGCACTTAAGTCTCATAAAGTAGAAGGGAACATTGAGAAGCAAAGGAAGAAACGGACCAGAGGTGGTAAGAGAAAACGGGAGAAGAGATTTGCAGAAGCAATTCGTGCCGCAAAAGAAGAAGAAGAATCGGCACCAGATGTCTTCTCGCTAATAAACACTCAACTAGCCATGCACGGCGAAGCTTCCAACAATGGATCAATGAAGAAGCAGCAAACTAAAGGTTCAGGTGAAGGTAAAAAGGTGGATAGAAAAATGTTGGTTGCTTATGAGAATGATGTGAAGGATTTGAAAGTGCAGGTTCTAAAATTTGAACAAATGGCAGAAGCAAATAAAAGGGAAAAACCTGTTTATGATGCTGCTATGAAAAAATTAGTCCAAACCCGCAAGGCATTGGCTGAGGCTGAAGCAGTTCATGCCTCTGCCTCAGATGATGTTGTTAGCAAAGAAAAAGATAAGAGATGGCTTAAGTTTTAG
Protein sequence

>Msa0453750

MGSEEERVLENQLELQLHEQRDSLTAIDHALLLDPTNSELLEVHEELVQAIKDAEEGLLHLKRARLLSEADTVLRSTDIFAEEKKVEPLDPADVEPEPLEEKSFSVGSKCRFRYKDGHWYNGQVMQLDNSVAKISFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGVDVQLTSLKEYAPTIWKPSLAGSSIWAVSNANAGIWRAAELESWDEKAGVGQVVFRDDGSSVKLGAQDMVLSEYADMSDIDSDSSLEQSDYSGSEEEEPQGLGFMDSTNLQKGVQTETAIFAKWENHTRGMASKMMANMGYQEGMGLGLTGQGMVDPIPVKVLPPKQSLDHALKSHKVEGNIEKQRKKRTRGGKRKREKRFAEAIRAAKEEEESAPDVFSLINTQLAMHGEASNNGSMKKQQTKGSGEGKKVDRKMLVAYENDVKDLKVQVLKFEQMAEANKREKPVYDAAMKKLVQTRKALAEAEAVHASASDDVVSKEKDKRWLKF*