Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455770 | XP_003627159.1 | 79.894 | 189 | 3 | 2 | 1 | 154 | 1 | 189 | 7.43e-96 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455770 | sp|Q9CAI5|CKL2_ARATH | 71.579 | 190 | 19 | 1 | 1 | 155 | 1 | 190 | 9.08e-92 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455770 | G7LI85 | 79.894 | 189 | 3 | 2 | 1 | 154 | 1 | 189 | 3.55e-96 | 298 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455770 | MtrunA17_Chr8g0342821 | 79.894 | 189 | 3 | 2 | 1 | 154 | 1 | 189 | 6.83e-100 | 298 |
| Msa0455770 | MtrunA17_Chr4g0071031 | 72.251 | 191 | 17 | 2 | 1 | 155 | 1 | 191 | 1.92e-92 | 278 |
| Msa0455770 | MtrunA17_Chr2g0329981 | 72.251 | 191 | 17 | 2 | 1 | 155 | 1 | 191 | 7.01e-92 | 278 |
| Msa0455770 | MtrunA17_Chr2g0299661 | 68.063 | 191 | 25 | 2 | 1 | 155 | 1 | 191 | 1.83e-85 | 261 |
| Msa0455770 | MtrunA17_Chr1g0166821 | 63.684 | 190 | 33 | 2 | 1 | 154 | 2 | 191 | 5.04e-81 | 249 |
| Msa0455770 | MtrunA17_Chr1g0183631 | 62.827 | 191 | 35 | 2 | 1 | 155 | 1 | 191 | 5.72e-80 | 246 |
| Msa0455770 | MtrunA17_Chr7g0261501 | 62.632 | 190 | 35 | 2 | 1 | 154 | 1 | 190 | 8.00e-80 | 246 |
| Msa0455770 | MtrunA17_Chr1g0187571 | 62.105 | 190 | 36 | 2 | 1 | 154 | 2 | 191 | 1.19e-77 | 241 |
| Msa0455770 | MtrunA17_Chr6g0486611 | 62.304 | 191 | 36 | 2 | 1 | 155 | 1 | 191 | 1.50e-77 | 239 |
| Msa0455770 | MtrunA17_Chr8g0390211 | 59.162 | 191 | 42 | 2 | 1 | 155 | 1 | 191 | 1.87e-72 | 226 |
| Msa0455770 | MtrunA17_Chr3g0140071 | 56.316 | 190 | 47 | 2 | 1 | 154 | 1 | 190 | 2.27e-69 | 218 |
| Msa0455770 | MtrunA17_Chr1g0146151 | 54.737 | 190 | 50 | 2 | 1 | 154 | 1 | 190 | 4.89e-68 | 215 |
| Msa0455770 | MtrunA17_Chr1g0167261 | 54.211 | 190 | 51 | 2 | 1 | 154 | 2 | 191 | 1.16e-65 | 206 |
| Msa0455770 | MtrunA17_Chr7g0214531 | 40.945 | 127 | 71 | 3 | 29 | 151 | 103 | 229 | 4.00e-27 | 108 |
| Msa0455770 | MtrunA17_Chr7g0253211 | 43.307 | 127 | 68 | 3 | 29 | 151 | 389 | 515 | 1.65e-26 | 107 |
| Msa0455770 | MtrunA17_Chr1g0213321 | 40.157 | 127 | 72 | 3 | 29 | 151 | 180 | 306 | 4.36e-26 | 105 |
| Msa0455770 | MtrunA17_Chr3g0140431 | 31.551 | 187 | 84 | 5 | 9 | 151 | 38 | 224 | 3.06e-24 | 100 |
| Msa0455770 | MtrunA17_Chr1g0146301 | 29.947 | 187 | 87 | 5 | 9 | 151 | 124 | 310 | 7.09e-24 | 99.4 |
| Msa0455770 | MtrunA17_Chr8g0340491 | 37.008 | 127 | 76 | 3 | 29 | 151 | 195 | 321 | 2.96e-22 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455770 | AT1G72710.1 | 71.579 | 190 | 19 | 1 | 1 | 155 | 1 | 190 | 9.23e-93 | 280 |
| Msa0455770 | AT4G26100.1 | 72.105 | 190 | 17 | 2 | 1 | 154 | 1 | 190 | 2.06e-91 | 276 |
| Msa0455770 | AT5G57015.1 | 69.110 | 191 | 23 | 2 | 1 | 155 | 1 | 191 | 1.57e-88 | 268 |
| Msa0455770 | AT2G19470.1 | 66.842 | 190 | 27 | 2 | 1 | 154 | 1 | 190 | 1.50e-85 | 260 |
| Msa0455770 | AT1G03930.1 | 64.737 | 190 | 31 | 2 | 1 | 154 | 1 | 190 | 4.64e-82 | 253 |
| Msa0455770 | AT5G44100.1 | 63.158 | 190 | 34 | 2 | 1 | 154 | 1 | 190 | 3.51e-80 | 248 |
| Msa0455770 | AT5G44100.2 | 63.158 | 190 | 34 | 2 | 1 | 154 | 1 | 190 | 3.51e-80 | 248 |
| Msa0455770 | AT4G28540.1 | 61.780 | 191 | 37 | 3 | 1 | 155 | 5 | 195 | 2.79e-77 | 241 |
| Msa0455770 | AT3G23340.1 | 60.733 | 191 | 39 | 2 | 1 | 155 | 1 | 191 | 7.73e-77 | 238 |
| Msa0455770 | AT5G43320.1 | 61.257 | 191 | 38 | 3 | 1 | 155 | 1 | 191 | 1.01e-76 | 239 |
| Msa0455770 | AT5G43320.2 | 60.209 | 191 | 40 | 2 | 1 | 155 | 1 | 191 | 1.28e-76 | 236 |
| Msa0455770 | AT5G43320.3 | 60.209 | 191 | 40 | 2 | 1 | 155 | 1 | 191 | 1.28e-76 | 236 |
| Msa0455770 | AT1G04440.1 | 61.780 | 191 | 37 | 3 | 1 | 155 | 1 | 191 | 2.50e-76 | 238 |
| Msa0455770 | AT4G14340.2 | 59.686 | 191 | 41 | 2 | 1 | 155 | 7 | 197 | 2.33e-74 | 229 |
| Msa0455770 | AT4G14340.1 | 59.686 | 191 | 41 | 2 | 1 | 155 | 7 | 197 | 9.72e-74 | 231 |
| Msa0455770 | AT4G28880.3 | 60.209 | 191 | 40 | 2 | 1 | 155 | 1 | 191 | 4.59e-73 | 228 |
| Msa0455770 | AT4G28880.2 | 60.209 | 191 | 40 | 2 | 1 | 155 | 1 | 191 | 4.59e-73 | 228 |
| Msa0455770 | AT4G28880.1 | 60.209 | 191 | 40 | 2 | 1 | 155 | 1 | 191 | 4.59e-73 | 228 |
| Msa0455770 | AT4G28880.4 | 60.209 | 191 | 40 | 2 | 1 | 155 | 1 | 191 | 4.59e-73 | 228 |
| Msa0455770 | AT4G28860.2 | 59.474 | 190 | 41 | 2 | 1 | 154 | 1 | 190 | 7.57e-73 | 226 |
| Msa0455770 | AT4G28860.1 | 59.474 | 190 | 41 | 2 | 1 | 154 | 1 | 190 | 2.25e-72 | 226 |
| Msa0455770 | AT3G23340.2 | 61.364 | 176 | 46 | 2 | 1 | 154 | 1 | 176 | 5.92e-71 | 223 |
| Msa0455770 | AT4G08800.1 | 50.000 | 190 | 27 | 4 | 1 | 154 | 1 | 158 | 9.33e-50 | 164 |
| Msa0455770 | AT5G18190.2 | 43.307 | 127 | 68 | 3 | 29 | 151 | 195 | 321 | 2.57e-26 | 107 |
| Msa0455770 | AT5G18190.1 | 43.307 | 127 | 68 | 3 | 29 | 151 | 195 | 321 | 2.57e-26 | 107 |
| Msa0455770 | AT3G03940.1 | 43.307 | 127 | 68 | 3 | 29 | 151 | 205 | 331 | 8.73e-26 | 105 |
| Msa0455770 | AT3G13670.1 | 38.583 | 127 | 74 | 3 | 29 | 151 | 203 | 329 | 3.41e-25 | 103 |
| Msa0455770 | AT2G25760.1 | 30.348 | 201 | 87 | 6 | 4 | 151 | 100 | 300 | 5.77e-25 | 103 |
| Msa0455770 | AT2G25760.2 | 30.348 | 201 | 87 | 6 | 4 | 151 | 100 | 300 | 6.68e-25 | 102 |
Find 60 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGAGATTGAAGGATATTT+AGG | 0.218210 | 3_3:+48818011 | None:intergenic |
| GACAATTTCCTCATGGGTTT+AGG | 0.228856 | 3_3:-48816901 | Msa0455770:CDS |
| ATTTATTCAATTTCTGTAAT+AGG | 0.238085 | 3_3:-48817104 | Msa0455770:CDS |
| TCTTTCGGAGAGATCTATTT+AGG | 0.249141 | 3_3:-48817794 | Msa0455770:intron |
| TTCCGTCTTGGGAGGAAAAT+TGG | 0.260322 | 3_3:-48817824 | Msa0455770:CDS |
| TTGAAATATTTATCCACGTT+TGG | 0.293405 | 3_3:+48814503 | None:intergenic |
| TGAGCAAATTTGCAGGCTTC+AGG | 0.314387 | 3_3:-48811377 | Msa0455770:intron |
| TGAAATATTTATCCACGTTT+GGG | 0.338383 | 3_3:+48814504 | None:intergenic |
| ACAATTTCCTCATGGGTTTA+GGG | 0.340991 | 3_3:-48816900 | Msa0455770:CDS |
| ATGAATACTCATCTTGGAAT+TGG | 0.372690 | 3_3:-48815683 | Msa0455770:intron |
| ATTAAACCCTAATTGAAAAT+CGG | 0.386169 | 3_3:+48817869 | None:intergenic |
| GGTTTAATGGAACCTCGAAT+TGG | 0.394217 | 3_3:-48817854 | Msa0455770:exon |
| AAAATTGGTAGCGGATCTTT+CGG | 0.404618 | 3_3:-48817809 | Msa0455770:CDS |
| CAAAATGCAGATGAATTTCA+CGG | 0.424897 | 3_3:-48815414 | Msa0455770:intron |
| AATATCCTTCAATCTCACTA+TGG | 0.430325 | 3_3:-48818007 | Msa0455770:five_prime_UTR |
| GCTAGTATGAATACTCATCT+TGG | 0.435171 | 3_3:-48815689 | Msa0455770:CDS |
| TTGGGAATAAGTTCCGTCTT+GGG | 0.445582 | 3_3:-48817835 | Msa0455770:CDS |
| GTTTAATGGAACCTCGAATT+GGG | 0.447782 | 3_3:-48817853 | Msa0455770:exon |
| TCTTATGCTTGCTGATCAAA+TGG | 0.460267 | 3_3:-48817061 | Msa0455770:intron |
| ACACCGGACCATTTCACATT+CGG | 0.480710 | 3_3:+48817180 | None:intergenic |
| CTGGGATACCGAATGTGAAA+TGG | 0.480856 | 3_3:-48817188 | Msa0455770:CDS |
| AACGATTGAGAGTGAGATTG+AGG | 0.486175 | 3_3:+48817961 | None:intergenic |
| ATTGGGAATAAGTTCCGTCT+TGG | 0.488327 | 3_3:-48817836 | Msa0455770:CDS |
| TTATCCACGTTTGGGAAAAG+TGG | 0.492195 | 3_3:+48814512 | None:intergenic |
| AAACGTGGATAAATATTTCA+AGG | 0.494306 | 3_3:-48814501 | Msa0455770:intron |
| ATCCTAGTGATGGATTTACT+TGG | 0.499759 | 3_3:-48817141 | Msa0455770:CDS |
| TTTACTTGGCCCTAGTCTTG+AGG | 0.502228 | 3_3:-48817127 | Msa0455770:CDS |
| CGGAACTTATTCCCAATTCG+AGG | 0.514181 | 3_3:+48817842 | None:intergenic |
| AAGCCAGACAATTTCCTCAT+GGG | 0.517628 | 3_3:-48816907 | Msa0455770:CDS |
| CGTCATCGTAGAAGAAGAAA+GGG | 0.517781 | 3_3:+48817923 | None:intergenic |
| TAGGTGTACATCATTGACTT+TGG | 0.518918 | 3_3:-48816767 | Msa0455770:CDS |
| TTGAATAAATCCTCAAGACT+AGG | 0.522442 | 3_3:+48817117 | None:intergenic |
| GCGTCATCGTAGAAGAAGAA+AGG | 0.524746 | 3_3:+48817922 | None:intergenic |
| GTGAGCCATAGTGAGATTGA+AGG | 0.527676 | 3_3:+48818002 | None:intergenic |
| AAACCCATGAGGAAATTGTC+TGG | 0.531680 | 3_3:+48816904 | None:intergenic |
| ATTGAGAGTGAGATTGAGGA+TGG | 0.532979 | 3_3:+48817965 | None:intergenic |
| GTGAAATGGTCCGGTGTCGA+AGG | 0.536640 | 3_3:-48817174 | Msa0455770:CDS |
| TCTCTCCGACATTCTTTGCA+AGG | 0.537195 | 3_3:+48814587 | None:intergenic |
| TGAGGATGGATGTGAGATTG+AGG | 0.543014 | 3_3:+48817979 | None:intergenic |
| GGTTTCAATGTTAAATGCAA+AGG | 0.543722 | 3_3:-48815393 | Msa0455770:intron |
| CACATCAGCATATTCCCTAC+AGG | 0.543817 | 3_3:-48816718 | Msa0455770:intron |
| AAAGCCAGACAATTTCCTCA+TGG | 0.544831 | 3_3:-48816908 | Msa0455770:CDS |
| TGAATAAATCCTCAAGACTA+GGG | 0.545896 | 3_3:+48817118 | None:intergenic |
| ATTGTACTCTCCTTCGACAC+CGG | 0.548807 | 3_3:+48817164 | None:intergenic |
| GAGGATGGATGTGAGATTGA+GGG | 0.553579 | 3_3:+48817980 | None:intergenic |
| ATGCCATAAAAGTACCTGTA+GGG | 0.563109 | 3_3:+48816704 | None:intergenic |
| CAGAGAGAGTAAGAATCTGA+CGG | 0.570204 | 3_3:-48815726 | Msa0455770:CDS |
| AGAGTACAATATCCTAGTGA+TGG | 0.570391 | 3_3:-48817151 | Msa0455770:CDS |
| ATACCGAATGTGAAATGGTC+CGG | 0.578759 | 3_3:-48817183 | Msa0455770:CDS |
| AGAGAGAGTAAGAATCTGAC+GGG | 0.588015 | 3_3:-48815725 | Msa0455770:CDS |
| GTCAGCCTTGCAAAGAATGT+CGG | 0.603406 | 3_3:-48814592 | Msa0455770:CDS |
| GGAATAAGTTCCGTCTTGGG+AGG | 0.606788 | 3_3:-48817832 | Msa0455770:CDS |
| TGAGAACAGTGTTGTTCGAG+AGG | 0.617577 | 3_3:-48814564 | Msa0455770:CDS |
| ATTTCCTCATGGGTTTAGGG+AGG | 0.628140 | 3_3:-48816897 | Msa0455770:CDS |
| CTTGGGAGGAAAATTGGTAG+CGG | 0.633001 | 3_3:-48817818 | Msa0455770:CDS |
| GGCCAAGTAAATCCATCACT+AGG | 0.640405 | 3_3:+48817139 | None:intergenic |
| GAGAACAGTGTTGTTCGAGA+GGG | 0.661344 | 3_3:-48814563 | Msa0455770:CDS |
| GTCATCGTAGAAGAAGAAAG+GGG | 0.712245 | 3_3:+48817924 | None:intergenic |
| TCATCGTAGAAGAAGAAAGG+GGG | 0.719084 | 3_3:+48817925 | None:intergenic |
| CACGCCTCCCTAAACCCATG+AGG | 0.721724 | 3_3:+48816893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTGTGAATTTTA+GGG | - | chr3_3:48811591-48811610 | Msa0455770:intron | 10.0% |
| !!! | TTTTTATTCTTTTGAATTTT+TGG | - | chr3_3:48811723-48811742 | Msa0455770:intron | 10.0% |
| !! | TTGAATAAAAAGTTATTAAA+AGG | - | chr3_3:48813354-48813373 | Msa0455770:intron | 10.0% |
| !!! | GAATTTTTTTTGTGAATTTT+AGG | - | chr3_3:48811590-48811609 | Msa0455770:intron | 15.0% |
| !!! | CATTATCTTTTTCAAAATTT+GGG | + | chr3_3:48811690-48811709 | None:intergenic | 15.0% |
| !!! | TCATTATCTTTTTCAAAATT+TGG | + | chr3_3:48811691-48811710 | None:intergenic | 15.0% |
| !! | ATTTATTCAATTTCTGTAAT+AGG | - | chr3_3:48812225-48812244 | Msa0455770:intron | 15.0% |
| !!! | TTTTGTAAAATCTATTATCA+TGG | - | chr3_3:48812735-48812754 | Msa0455770:intron | 15.0% |
| !!! | TGAATCCTTTAATATTATTT+TGG | - | chr3_3:48813134-48813153 | Msa0455770:intron | 15.0% |
| !! | GATTACCAAAATAATATTAA+AGG | + | chr3_3:48813142-48813161 | None:intergenic | 15.0% |
| !!! | AATATACTCTATTATGTTTT+CGG | - | chr3_3:48813553-48813572 | Msa0455770:intron | 15.0% |
| !! | TTCATTTGAATCTTTATTAT+TGG | - | chr3_3:48814513-48814532 | Msa0455770:CDS | 15.0% |
| !!! | ATAATCTTTGACTTATTTTT+AGG | - | chr3_3:48815105-48815124 | Msa0455770:intron | 15.0% |
| !!! | ATTGATTAAATTTTCATGTT+AGG | - | chr3_3:48815226-48815245 | Msa0455770:intron | 15.0% |
| !!! | AATAGTTCTATTAAAAATTC+AGG | - | chr3_3:48815376-48815395 | Msa0455770:intron | 15.0% |
| !!! | AACAAAATTTGATAACTTTT+AGG | - | chr3_3:48816591-48816610 | Msa0455770:intron | 15.0% |
| !!! | ACAAAATTTGATAACTTTTA+GGG | - | chr3_3:48816592-48816611 | Msa0455770:intron | 15.0% |
| !!! | AAATGAATATTTTATCTGTA+AGG | + | chr3_3:48817135-48817154 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTAACAAATCTA+TGG | - | chr3_3:48817645-48817664 | Msa0455770:intron | 15.0% |
| !! | ATTAAACCCTAATTGAAAAT+CGG | + | chr3_3:48811463-48811482 | None:intergenic | 20.0% |
| !!! | TTCTTCATTAGTTTGAATAT+TGG | + | chr3_3:48811645-48811664 | None:intergenic | 20.0% |
| !!! | TCAATAACAACAAAAGTATT+CGG | + | chr3_3:48811761-48811780 | None:intergenic | 20.0% |
| !! | ATAAACAAATTCACTAAGTT+GGG | + | chr3_3:48812040-48812059 | None:intergenic | 20.0% |
| !! | AATAAACAAATTCACTAAGT+TGG | + | chr3_3:48812041-48812060 | None:intergenic | 20.0% |
| !!! | CTTAGTGAATTTGTTTATTT+TGG | - | chr3_3:48812042-48812061 | Msa0455770:intron | 20.0% |
| !!! | AAAATTCTATATCTGGAATT+TGG | - | chr3_3:48812758-48812777 | Msa0455770:intron | 20.0% |
| !! | AGTTATTATGTTTGTAAGTA+TGG | + | chr3_3:48813080-48813099 | None:intergenic | 20.0% |
| !! | TTGATTGTATACCTATTATA+TGG | + | chr3_3:48813195-48813214 | None:intergenic | 20.0% |
| !! | GAAAAACTAATTGATACTAA+TGG | + | chr3_3:48813261-48813280 | None:intergenic | 20.0% |
| !! | GAATTTATGCCAATTAAATT+TGG | - | chr3_3:48813378-48813397 | Msa0455770:intron | 20.0% |
| !!! | AAGTGATATTTTTTTGAACA+AGG | + | chr3_3:48813460-48813479 | None:intergenic | 20.0% |
| !! | AATAAATAATCGTAAAGACT+AGG | + | chr3_3:48813485-48813504 | None:intergenic | 20.0% |
| !!! | GTTCTTATGTATTTTTTAAG+AGG | - | chr3_3:48813793-48813812 | Msa0455770:intron | 20.0% |
| !!! | TTATGTATTTTTTAAGAGGA+AGG | - | chr3_3:48813797-48813816 | Msa0455770:intron | 20.0% |
| !! | TGAGATTGAAGAATAAAATT+GGG | + | chr3_3:48814077-48814096 | None:intergenic | 20.0% |
| !!! | TATTTTTGACAAATAGCTAA+TGG | - | chr3_3:48814958-48814977 | Msa0455770:intron | 20.0% |
| !! | TCAATTATGTAGATGATATT+TGG | + | chr3_3:48815211-48815230 | None:intergenic | 20.0% |
| !! | ATAAGTTTATGAAATAGAAC+AGG | - | chr3_3:48815830-48815849 | Msa0455770:intron | 20.0% |
| !! | TTCAATTCCGATTTTCAATT+AGG | - | chr3_3:48811453-48811472 | Msa0455770:intron | 25.0% |
| !! | TCAATTCCGATTTTCAATTA+GGG | - | chr3_3:48811454-48811473 | Msa0455770:intron | 25.0% |
| !! | GATTTTCAATTAGGGTTTAA+TGG | - | chr3_3:48811462-48811481 | Msa0455770:intron | 25.0% |
| ! | TTCACAAAAATGCAAGAAAT+TGG | + | chr3_3:48811573-48811592 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGTTTTTGTTGC+AGG | - | chr3_3:48811617-48811636 | Msa0455770:intron | 25.0% |
| ! | TTATTGAAGTTTGATGAGAA+GGG | - | chr3_3:48811774-48811793 | Msa0455770:intron | 25.0% |
| !! | TTTGAAACAAAGAGTTGTAT+AGG | - | chr3_3:48811854-48811873 | Msa0455770:intron | 25.0% |
| ! | AGGTAATTAGATGATTGATT+AGG | - | chr3_3:48811983-48812002 | Msa0455770:intron | 25.0% |
| ! | TAGACTTAATATTACTCACT+TGG | - | chr3_3:48812081-48812100 | Msa0455770:intron | 25.0% |
| ! | TTGAGACATTATAAGAAAAG+TGG | + | chr3_3:48812334-48812353 | None:intergenic | 25.0% |
| !!! | ATACCAAGTCATTTTTACAT+CGG | - | chr3_3:48812393-48812412 | Msa0455770:intron | 25.0% |
| !! | TTTTCTGATTTTATTCAGCA+TGG | - | chr3_3:48812654-48812673 | Msa0455770:intron | 25.0% |
| ! | ATGATAGGGAATATATTGAT+GGG | + | chr3_3:48812706-48812725 | None:intergenic | 25.0% |
| !! | CAAAATAAGAAAGCATGATA+GGG | + | chr3_3:48812720-48812739 | None:intergenic | 25.0% |
| !! | ACAAAATAAGAAAGCATGAT+AGG | + | chr3_3:48812721-48812740 | None:intergenic | 25.0% |
| ! | ATCATGGAAAATTCTATATC+TGG | - | chr3_3:48812751-48812770 | Msa0455770:intron | 25.0% |
| ! | AATTTGGACATCCATATAAT+AGG | - | chr3_3:48813181-48813200 | Msa0455770:intron | 25.0% |
| ! | CCAATGAAACCAAATTTAAT+TGG | + | chr3_3:48813390-48813409 | None:intergenic | 25.0% |
| !! | CCAATTAAATTTGGTTTCAT+TGG | - | chr3_3:48813387-48813406 | Msa0455770:intron | 25.0% |
| !!! | TGATATTTTTTTGAACAAGG+AGG | + | chr3_3:48813457-48813476 | None:intergenic | 25.0% |
| ! | AATCAATGGCTATTAAGAAA+GGG | + | chr3_3:48813701-48813720 | None:intergenic | 25.0% |
| ! | AAATCAATGGCTATTAAGAA+AGG | + | chr3_3:48813702-48813721 | None:intergenic | 25.0% |
| !!! | CATTTTCAGGTAAAAATCAA+TGG | + | chr3_3:48813715-48813734 | None:intergenic | 25.0% |
| ! | AGTCTATCACCTTTATTATT+TGG | - | chr3_3:48813825-48813844 | Msa0455770:intron | 25.0% |
| ! | TGTCAAATGCCAAATAATAA+AGG | + | chr3_3:48813837-48813856 | None:intergenic | 25.0% |
| !! | TTTTTATAGGTCATACTGAA+CGG | + | chr3_3:48813993-48814012 | None:intergenic | 25.0% |
| ! | GTGAGATTGAAGAATAAAAT+TGG | + | chr3_3:48814078-48814097 | None:intergenic | 25.0% |
| ! | CTCAAATTAAGAAATTAACC+AGG | + | chr3_3:48814336-48814355 | None:intergenic | 25.0% |
| ! | TGAAATATTTATCCACGTTT+GGG | + | chr3_3:48814828-48814847 | None:intergenic | 25.0% |
| ! | TTGAAATATTTATCCACGTT+TGG | + | chr3_3:48814829-48814848 | None:intergenic | 25.0% |
| ! | AAACGTGGATAAATATTTCA+AGG | - | chr3_3:48814828-48814847 | Msa0455770:intron | 25.0% |
| ! | TTTGTCAAAAATAACCACTA+TGG | + | chr3_3:48814989-48815008 | None:intergenic | 25.0% |
| !!! | ATCTTTGACTTATTTTTAGG+TGG | - | chr3_3:48815108-48815127 | Msa0455770:intron | 25.0% |
| ! | TACAAACAAGTGATACAATA+AGG | + | chr3_3:48815263-48815282 | None:intergenic | 25.0% |
| ! | TATAGCGTATATTGAATTAG+CGG | - | chr3_3:48815946-48815965 | Msa0455770:intron | 25.0% |
| !! | ATCTGAAACAAATAAGGATT+GGG | + | chr3_3:48816200-48816219 | None:intergenic | 25.0% |
| !! | TATCTGAAACAAATAAGGAT+TGG | + | chr3_3:48816201-48816220 | None:intergenic | 25.0% |
| !! | CTGATTATCTGAAACAAATA+AGG | + | chr3_3:48816206-48816225 | None:intergenic | 25.0% |
| ! | CTTATTTGTTTCAGATAATC+AGG | - | chr3_3:48816204-48816223 | Msa0455770:intron | 25.0% |
| !! | TTTTAATGTACGAACACTTA+TGG | - | chr3_3:48816345-48816364 | Msa0455770:intron | 25.0% |
| ! | TTTCTAGATACGTTTAGTAT+GGG | - | chr3_3:48816448-48816467 | Msa0455770:intron | 25.0% |
| ! | ATTAAGTTACAACTAAGGTA+GGG | - | chr3_3:48816519-48816538 | Msa0455770:intron | 25.0% |
| ! | TTTCTTGCGTTAAAACAAAA+TGG | + | chr3_3:48816676-48816695 | None:intergenic | 25.0% |
| !! | ATTCATTTTGTGTCAATATG+TGG | - | chr3_3:48817147-48817166 | Msa0455770:CDS | 25.0% |
| !! | TTAGTGACATTCATTAGTTT+GGG | + | chr3_3:48817267-48817286 | None:intergenic | 25.0% |
| !! | TTGACTTTTAACAAGATTTG+TGG | - | chr3_3:48817291-48817310 | Msa0455770:intron | 25.0% |
| !!! | AAGGTTTTAAATAACGGTAA+CGG | + | chr3_3:48817422-48817441 | None:intergenic | 25.0% |
| !!! | CTTAGCAAGGTTTTAAATAA+CGG | + | chr3_3:48817428-48817447 | None:intergenic | 25.0% |
| AGTGAGATTGAAGGATATTT+AGG | + | chr3_3:48811321-48811340 | None:intergenic | 30.0% | |
| AATATCCTTCAATCTCACTA+TGG | - | chr3_3:48811322-48811341 | Msa0455770:CDS | 30.0% | |
| GTTATTGAAGTTTGATGAGA+AGG | - | chr3_3:48811773-48811792 | Msa0455770:intron | 30.0% | |
| TATTGAAGTTTGATGAGAAG+GGG | - | chr3_3:48811775-48811794 | Msa0455770:intron | 30.0% | |
| AAAGAGTTGTATAGGCAATA+TGG | - | chr3_3:48811862-48811881 | Msa0455770:intron | 30.0% | |
| AAGAGTTGTATAGGCAATAT+GGG | - | chr3_3:48811863-48811882 | Msa0455770:intron | 30.0% | |
| TATGGGATATTGAATTTCGT+TGG | - | chr3_3:48811880-48811899 | Msa0455770:intron | 30.0% | |
| TATTACTCACTTGGCTTAAA+CGG | - | chr3_3:48812090-48812109 | Msa0455770:intron | 30.0% | |
| ! | GTTTCTTTTCTTTGTTAGCT+GGG | - | chr3_3:48812123-48812142 | Msa0455770:intron | 30.0% |
| TGAATAAATCCTCAAGACTA+GGG | + | chr3_3:48812214-48812233 | None:intergenic | 30.0% | |
| TTGAATAAATCCTCAAGACT+AGG | + | chr3_3:48812215-48812234 | None:intergenic | 30.0% | |
| TTACAAGCTTATGCAATACA+GGG | + | chr3_3:48812301-48812320 | None:intergenic | 30.0% | |
| ATTACAAGCTTATGCAATAC+AGG | + | chr3_3:48812302-48812321 | None:intergenic | 30.0% | |
| !!! | TACCAAGTCATTTTTACATC+GGG | - | chr3_3:48812394-48812413 | Msa0455770:intron | 30.0% |
| AATTGATACATAACAAGCGT+TGG | + | chr3_3:48812524-48812543 | None:intergenic | 30.0% | |
| TTCATATTTGCCTCTTATGT+AGG | - | chr3_3:48812543-48812562 | Msa0455770:intron | 30.0% | |
| TGATAGGGAATATATTGATG+GGG | + | chr3_3:48812705-48812724 | None:intergenic | 30.0% | |
| CATGATAGGGAATATATTGA+TGG | + | chr3_3:48812707-48812726 | None:intergenic | 30.0% | |
| GCTGATTACTACTATTTAGT+AGG | - | chr3_3:48812814-48812833 | Msa0455770:intron | 30.0% | |
| GATTACTACTATTTAGTAGG+AGG | - | chr3_3:48812817-48812836 | Msa0455770:intron | 30.0% | |
| AAGAAAATAGAATCAATGCC+AGG | + | chr3_3:48812941-48812960 | None:intergenic | 30.0% | |
| AATGGATCTTAGTTCAAACA+AGG | + | chr3_3:48813053-48813072 | None:intergenic | 30.0% | |
| ATAACTTATGTTGCTGTAAG+TGG | - | chr3_3:48813523-48813542 | Msa0455770:intron | 30.0% | |
| ATGAATACTCATCTTGGAAT+TGG | - | chr3_3:48813646-48813665 | Msa0455770:intron | 30.0% | |
| ! | AGCAAAAAACTCACATTTTC+AGG | + | chr3_3:48813728-48813747 | None:intergenic | 30.0% |
| CAAAATGCAGATGAATTTCA+CGG | - | chr3_3:48813915-48813934 | Msa0455770:intron | 30.0% | |
| GGTTTCAATGTTAAATGCAA+AGG | - | chr3_3:48813936-48813955 | Msa0455770:intron | 30.0% | |
| GAAGAATAAAATTGGGCTTA+GGG | + | chr3_3:48814070-48814089 | None:intergenic | 30.0% | |
| TGAAGAATAAAATTGGGCTT+AGG | + | chr3_3:48814071-48814090 | None:intergenic | 30.0% | |
| !!! | ATCGATTGAGAGTATTTTGA+GGG | + | chr3_3:48814199-48814218 | None:intergenic | 30.0% |
| ! | CAATCAACTTACATTTTTCC+TGG | - | chr3_3:48814315-48814334 | Msa0455770:intron | 30.0% |
| TGATATCAGTTATGTGCAAT+TGG | - | chr3_3:48814418-48814437 | Msa0455770:intron | 30.0% | |
| GATATCAGTTATGTGCAATT+GGG | - | chr3_3:48814419-48814438 | Msa0455770:intron | 30.0% | |
| TGCAGAAAGAATCAAATGAA+TGG | - | chr3_3:48814536-48814555 | Msa0455770:CDS | 30.0% | |
| GCAGAAAGAATCAAATGAAT+GGG | - | chr3_3:48814537-48814556 | Msa0455770:CDS | 30.0% | |
| ! | AAGAATCAAATGAATGGGTT+TGG | - | chr3_3:48814542-48814561 | Msa0455770:CDS | 30.0% |
| AGCACAACATACATTCATTT+AGG | + | chr3_3:48814648-48814667 | None:intergenic | 30.0% | |
| ! | TATTTCTACTTGTGAACGTT+TGG | - | chr3_3:48814676-48814695 | Msa0455770:intron | 30.0% |
| ! | AATTTACCTGTCATCTTTTC+AGG | - | chr3_3:48814709-48814728 | Msa0455770:intron | 30.0% |
| TACAAAGTAAGCTATAGAAC+AGG | - | chr3_3:48814912-48814931 | Msa0455770:intron | 30.0% | |
| !!! | TTATTTTTAGGTGGAAGACT+TGG | - | chr3_3:48815117-48815136 | Msa0455770:intron | 30.0% |
| ! | GAGATTCAAATGGATTTCAA+GGG | + | chr3_3:48815522-48815541 | None:intergenic | 30.0% |
| TATATTGAATTAGCGGTCTT+AGG | - | chr3_3:48815953-48815972 | Msa0455770:intron | 30.0% | |
| AGGTTCATCTTAATTGTCAT+AGG | + | chr3_3:48816017-48816036 | None:intergenic | 30.0% | |
| ! | TCTGAAACAAATAAGGATTG+GGG | + | chr3_3:48816199-48816218 | None:intergenic | 30.0% |
| TTTGTTTCAGATAATCAGGT+CGG | - | chr3_3:48816208-48816227 | Msa0455770:intron | 30.0% | |
| AAGGATGCACATAATATGTT+TGG | - | chr3_3:48816305-48816324 | Msa0455770:intron | 30.0% | |
| CTTTCTAGATACGTTTAGTA+TGG | - | chr3_3:48816447-48816466 | Msa0455770:intron | 30.0% | |
| ! | TTTAGTATGGGTGTTACATT+TGG | - | chr3_3:48816460-48816479 | Msa0455770:intron | 30.0% |
| CATTAAGTTACAACTAAGGT+AGG | - | chr3_3:48816518-48816537 | Msa0455770:intron | 30.0% | |
| TTAAGTTACAACTAAGGTAG+GGG | - | chr3_3:48816520-48816539 | Msa0455770:intron | 30.0% | |
| GACAAATTAGAACATTTACC+CGG | + | chr3_3:48816558-48816577 | None:intergenic | 30.0% | |
| TTTAACCCTTAGAAATAGAG+TGG | - | chr3_3:48816628-48816647 | Msa0455770:intron | 30.0% | |
| !! | TATCACCACTCTATTTCTAA+GGG | + | chr3_3:48816636-48816655 | None:intergenic | 30.0% |
| !! | CACGAGAGTACTTTATTTAA+TGG | + | chr3_3:48816708-48816727 | None:intergenic | 30.0% |
| TCTCGTGCAAGTAAAAAATT+TGG | - | chr3_3:48816721-48816740 | Msa0455770:CDS | 30.0% | |
| ! | TTTTCTTCTCAGCGTTAAAA+CGG | + | chr3_3:48816770-48816789 | None:intergenic | 30.0% |
| TTTCACTCTCACTCTTAATT+TGG | - | chr3_3:48816995-48817014 | Msa0455770:intron | 30.0% | |
| TTCACTCTCACTCTTAATTT+GGG | - | chr3_3:48816996-48817015 | Msa0455770:intron | 30.0% | |
| ! | AGATGAGATGAGATTTTAGA+GGG | - | chr3_3:48817043-48817062 | Msa0455770:intron | 30.0% |
| !! | AGATTTTAGAGGGGAAAAAA+TGG | - | chr3_3:48817053-48817072 | Msa0455770:intron | 30.0% |
| !! | GATTTTAGAGGGGAAAAAAT+GGG | - | chr3_3:48817054-48817073 | Msa0455770:intron | 30.0% |
| GTTAGTGACATTCATTAGTT+TGG | + | chr3_3:48817268-48817287 | None:intergenic | 30.0% | |
| TTTGGATGAAGAGATGATTA+GGG | + | chr3_3:48817493-48817512 | None:intergenic | 30.0% | |
| ATTTGGATGAAGAGATGATT+AGG | + | chr3_3:48817494-48817513 | None:intergenic | 30.0% | |
| ! | TCCAAATTTTCATCAATGTG+AGG | - | chr3_3:48817507-48817526 | Msa0455770:intron | 30.0% |
| TCCTCACATTGATGAAAATT+TGG | + | chr3_3:48817511-48817530 | None:intergenic | 30.0% | |
| TGTAACAAATCTATGGCTAA+TGG | - | chr3_3:48817652-48817671 | Msa0455770:intron | 30.0% | |
| ATGAAACTTCCCTATACATA+GGG | + | chr3_3:48817712-48817731 | None:intergenic | 30.0% | |
| AATGAAACTTCCCTATACAT+AGG | + | chr3_3:48817713-48817732 | None:intergenic | 30.0% | |
| ATGTATAGGGAAGTTTCATT+TGG | - | chr3_3:48817713-48817732 | Msa0455770:intron | 30.0% | |
| CTATTAGCATGTGACAATTA+CGG | + | chr3_3:48817815-48817834 | None:intergenic | 30.0% | |
| TCATTAATGAGCAAATTTGC+AGG | - | chr3_3:48817945-48817964 | Msa0455770:five_prime_UTR | 30.0% | |
| GTTTAATGGAACCTCGAATT+GGG | - | chr3_3:48811476-48811495 | Msa0455770:intron | 35.0% | |
| !! | AAAATTGGTAGCGGATCTTT+CGG | - | chr3_3:48811520-48811539 | Msa0455770:intron | 35.0% |
| TCTTTCGGAGAGATCTATTT+AGG | - | chr3_3:48811535-48811554 | Msa0455770:intron | 35.0% | |
| ! | GTTTTCGATACTGAACTTGT+TGG | - | chr3_3:48811912-48811931 | Msa0455770:intron | 35.0% |
| GATTACAGAAGCAGGTAATT+AGG | - | chr3_3:48811963-48811982 | Msa0455770:intron | 35.0% | |
| ! | GATGATTGATTAGGTTAGTC+TGG | - | chr3_3:48811992-48812011 | Msa0455770:intron | 35.0% |
| !!! | TTGGCTTAAACGGTTTTTTC+TGG | - | chr3_3:48812100-48812119 | Msa0455770:intron | 35.0% |
| !!! | TGGCTTAAACGGTTTTTTCT+GGG | - | chr3_3:48812101-48812120 | Msa0455770:intron | 35.0% |
| ! | GGTTTCTTTTCTTTGTTAGC+TGG | - | chr3_3:48812122-48812141 | Msa0455770:intron | 35.0% |
| AGAGTACAATATCCTAGTGA+TGG | - | chr3_3:48812178-48812197 | Msa0455770:intron | 35.0% | |
| !! | ATCCTAGTGATGGATTTACT+TGG | - | chr3_3:48812188-48812207 | Msa0455770:intron | 35.0% |
| ! | TCTTATGCTTGCTGATCAAA+TGG | - | chr3_3:48812268-48812287 | Msa0455770:intron | 35.0% |
| ACAATTTCCTCATGGGTTTA+GGG | - | chr3_3:48812429-48812448 | Msa0455770:intron | 35.0% | |
| ATGATGTACACCTACATAAG+AGG | + | chr3_3:48812556-48812575 | None:intergenic | 35.0% | |
| !! | TAGGTGTACATCATTGACTT+TGG | - | chr3_3:48812562-48812581 | Msa0455770:intron | 35.0% |
| ! | ATTCCCTACAGGTACTTTTA+TGG | - | chr3_3:48812622-48812641 | Msa0455770:intron | 35.0% |
| !! | ATGCCATAAAAGTACCTGTA+GGG | + | chr3_3:48812628-48812647 | None:intergenic | 35.0% |
| ! | AGGTACTTTTATGGCATCAA+TGG | - | chr3_3:48812631-48812650 | Msa0455770:intron | 35.0% |
| ! | ACTAATTTTGAGCTTTGCAC+AGG | - | chr3_3:48812894-48812913 | Msa0455770:intron | 35.0% |
| ! | CTAATTTTGAGCTTTGCACA+GGG | - | chr3_3:48812895-48812914 | Msa0455770:intron | 35.0% |
| GGACAAATAACTTAACGAAC+TGG | + | chr3_3:48813011-48813030 | None:intergenic | 35.0% | |
| GGCTAACAAAACTATCATCA+AGG | + | chr3_3:48813032-48813051 | None:intergenic | 35.0% | |
| GTTTGTAAGTATGGCATCAA+TGG | + | chr3_3:48813071-48813090 | None:intergenic | 35.0% | |
| GCTAGTATGAATACTCATCT+TGG | - | chr3_3:48813640-48813659 | Msa0455770:intron | 35.0% | |
| TTTAATAGAGCAAAGCCGTA+GGG | - | chr3_3:48813747-48813766 | Msa0455770:intron | 35.0% | |
| ! | TAGGGTTTGAAGTTGTAGAA+GGG | + | chr3_3:48814052-48814071 | None:intergenic | 35.0% |
| ! | TTAGGGTTTGAAGTTGTAGA+AGG | + | chr3_3:48814053-48814072 | None:intergenic | 35.0% |
| GAACCAAGATGTAAGATTGA+GGG | + | chr3_3:48814177-48814196 | None:intergenic | 35.0% | |
| !!! | CATCGATTGAGAGTATTTTG+AGG | + | chr3_3:48814200-48814219 | None:intergenic | 35.0% |
| TAGTGAGAGACTTAGATTGA+CGG | + | chr3_3:48814228-48814247 | None:intergenic | 35.0% | |
| GATTGAATTTCTGCGATTGA+GGG | + | chr3_3:48814300-48814319 | None:intergenic | 35.0% | |
| TGATTGAATTTCTGCGATTG+AGG | + | chr3_3:48814301-48814320 | None:intergenic | 35.0% | |
| TTACCTTGAGAAACTGAAGT+AGG | + | chr3_3:48814487-48814506 | None:intergenic | 35.0% | |
| ! | ATGAATGGGTTTGGATTGTT+AGG | - | chr3_3:48814551-48814570 | Msa0455770:CDS | 35.0% |
| TTTGGATTGTTAGGCTCATA+AGG | - | chr3_3:48814560-48814579 | Msa0455770:CDS | 35.0% | |
| AAGATGCAATGATTCTGAAC+AGG | - | chr3_3:48814605-48814624 | Msa0455770:intron | 35.0% | |
| TAGAACAGGCTAACAAAACA+TGG | - | chr3_3:48814926-48814945 | Msa0455770:intron | 35.0% | |
| AGCTAATGGTTATTCCATAG+TGG | - | chr3_3:48814972-48814991 | Msa0455770:intron | 35.0% | |
| AAAGAATGCTATGCTCTGTT+TGG | + | chr3_3:48815148-48815167 | None:intergenic | 35.0% | |
| AAACAGAGCATAGCATTCTT+TGG | - | chr3_3:48815147-48815166 | Msa0455770:intron | 35.0% | |
| TATGTAGATGATATTTGGCG+AGG | + | chr3_3:48815206-48815225 | None:intergenic | 35.0% | |
| AATATTGCGACAGTTTGCAA+GGG | + | chr3_3:48815446-48815465 | None:intergenic | 35.0% | |
| AAATATTGCGACAGTTTGCA+AGG | + | chr3_3:48815447-48815466 | None:intergenic | 35.0% | |
| ! | GGAGATTCAAATGGATTTCA+AGG | + | chr3_3:48815523-48815542 | None:intergenic | 35.0% |
| !! | GCATTTTGCGACCTTTAAAA+TGG | + | chr3_3:48815704-48815723 | None:intergenic | 35.0% |
| TTGCTAATTCATACGTGTCA+CGG | + | chr3_3:48815992-48816011 | None:intergenic | 35.0% | |
| CAATTAAGATGAACCTACGA+CGG | - | chr3_3:48816021-48816040 | Msa0455770:intron | 35.0% | |
| ATGTCTACAATACAACCTGA+CGG | + | chr3_3:48816099-48816118 | None:intergenic | 35.0% | |
| AAATCCATATCATCTTGCAG+CGG | + | chr3_3:48816284-48816303 | None:intergenic | 35.0% | |
| GCAAGATGATATGGATTTCA+AGG | - | chr3_3:48816286-48816305 | Msa0455770:intron | 35.0% | |
| ! | CATGTGCATTAACTTGATAC+TGG | + | chr3_3:48816422-48816441 | None:intergenic | 35.0% |
| GGGTCATTAAGTTACAACTA+AGG | - | chr3_3:48816514-48816533 | Msa0455770:intron | 35.0% | |
| TAAGTTACAACTAAGGTAGG+GGG | - | chr3_3:48816521-48816540 | Msa0455770:intron | 35.0% | |
| !! | GTATCACCACTCTATTTCTA+AGG | + | chr3_3:48816637-48816656 | None:intergenic | 35.0% |
| ACTATGTTTCGCAGTTGTAA+CGG | + | chr3_3:48816881-48816900 | None:intergenic | 35.0% | |
| ACAACTGCGAAACATAGTTA+CGG | - | chr3_3:48816883-48816902 | Msa0455770:intron | 35.0% | |
| AGAGTGAAATTAGTTAGAGG+AGG | + | chr3_3:48816984-48817003 | None:intergenic | 35.0% | |
| GTGAGAGTGAAATTAGTTAG+AGG | + | chr3_3:48816987-48817006 | None:intergenic | 35.0% | |
| ! | GAGATGAGATGAGATTTTAG+AGG | - | chr3_3:48817042-48817061 | Msa0455770:intron | 35.0% |
| !! | GATGAGATGAGATTTTAGAG+GGG | - | chr3_3:48817044-48817063 | Msa0455770:intron | 35.0% |
| GAGAGAAAGAAGAAAGAAGA+AGG | - | chr3_3:48817198-48817217 | Msa0455770:intron | 35.0% | |
| AAAGAAGAAAGAAGAAGGTG+AGG | - | chr3_3:48817203-48817222 | Msa0455770:intron | 35.0% | |
| ! | CGTTAACGTTTTCATGGTTT+CGG | + | chr3_3:48817384-48817403 | None:intergenic | 35.0% |
| ! | TTAAATAACGGTAACGGTTG+CGG | + | chr3_3:48817416-48817435 | None:intergenic | 35.0% |
| TCATCAGTATGATGATCCAT+GGG | + | chr3_3:48817562-48817581 | None:intergenic | 35.0% | |
| TTCATCAGTATGATGATCCA+TGG | + | chr3_3:48817563-48817582 | None:intergenic | 35.0% | |
| AGCAATGCAACATCGATATA+TGG | + | chr3_3:48817586-48817605 | None:intergenic | 35.0% | |
| TGAAACTTCCCTATACATAG+GGG | + | chr3_3:48817711-48817730 | None:intergenic | 35.0% | |
| AAATCCTTTCCAGGGAAAAT+TGG | - | chr3_3:48817742-48817761 | Msa0455770:intron | 35.0% | |
| ! | AATCTCGCCATTAACTTGAT+TGG | - | chr3_3:48817880-48817899 | Msa0455770:five_prime_UTR | 35.0% |
| GTGATTTGAAGATGTGACTT+CGG | + | chr3_3:48817920-48817939 | None:intergenic | 35.0% | |
| !!! | CTCTTATTTTAGCTGCTTGA+AGG | + | chr3_3:48818017-48818036 | None:intergenic | 35.0% |
| ATTGAGAGTGAGATTGAGGA+TGG | + | chr3_3:48811367-48811386 | None:intergenic | 40.0% | |
| AACGATTGAGAGTGAGATTG+AGG | + | chr3_3:48811371-48811390 | None:intergenic | 40.0% | |
| TCATCGTAGAAGAAGAAAGG+GGG | + | chr3_3:48811407-48811426 | None:intergenic | 40.0% | |
| GTCATCGTAGAAGAAGAAAG+GGG | + | chr3_3:48811408-48811427 | None:intergenic | 40.0% | |
| CGTCATCGTAGAAGAAGAAA+GGG | + | chr3_3:48811409-48811428 | None:intergenic | 40.0% | |
| GGTTTAATGGAACCTCGAAT+TGG | - | chr3_3:48811475-48811494 | Msa0455770:intron | 40.0% | |
| ATTGGGAATAAGTTCCGTCT+TGG | - | chr3_3:48811493-48811512 | Msa0455770:intron | 40.0% | |
| TTGGGAATAAGTTCCGTCTT+GGG | - | chr3_3:48811494-48811513 | Msa0455770:intron | 40.0% | |
| ! | TACCAATTTTCCTCCCAAGA+CGG | + | chr3_3:48811510-48811529 | None:intergenic | 40.0% |
| !! | GAAGTATCGATTACAGAAGC+AGG | - | chr3_3:48811955-48811974 | Msa0455770:intron | 40.0% |
| ATACCGAATGTGAAATGGTC+CGG | - | chr3_3:48812146-48812165 | Msa0455770:intron | 40.0% | |
| ! | TATGCTTGCTGATCAAATGG+TGG | - | chr3_3:48812271-48812290 | Msa0455770:intron | 40.0% |
| ! | ATGCTTGCTGATCAAATGGT+GGG | - | chr3_3:48812272-48812291 | Msa0455770:intron | 40.0% |
| GTCCCGATGTAAAAATGACT+TGG | + | chr3_3:48812399-48812418 | None:intergenic | 40.0% | |
| AAAGCCAGACAATTTCCTCA+TGG | - | chr3_3:48812421-48812440 | Msa0455770:intron | 40.0% | |
| AAGCCAGACAATTTCCTCAT+GGG | - | chr3_3:48812422-48812441 | Msa0455770:intron | 40.0% | |
| AAACCCATGAGGAAATTGTC+TGG | + | chr3_3:48812428-48812447 | None:intergenic | 40.0% | |
| GACAATTTCCTCATGGGTTT+AGG | - | chr3_3:48812428-48812447 | Msa0455770:intron | 40.0% | |
| !! | GATGCCATAAAAGTACCTGT+AGG | + | chr3_3:48812629-48812648 | None:intergenic | 40.0% |
| ACTTAACGAACTGGTGTAAC+AGG | + | chr3_3:48813002-48813021 | None:intergenic | 40.0% | |
| TATGTTGCTGTAAGTGGTCA+AGG | - | chr3_3:48813529-48813548 | Msa0455770:intron | 40.0% | |
| GATTCTTACTCTCTCTGCAA+GGG | + | chr3_3:48813600-48813619 | None:intergenic | 40.0% | |
| AGATTCTTACTCTCTCTGCA+AGG | + | chr3_3:48813601-48813620 | None:intergenic | 40.0% | |
| CAGAGAGAGTAAGAATCTGA+CGG | - | chr3_3:48813603-48813622 | Msa0455770:intron | 40.0% | |
| AGAGAGAGTAAGAATCTGAC+GGG | - | chr3_3:48813604-48813623 | Msa0455770:intron | 40.0% | |
| CTTTAATAGAGCAAAGCCGT+AGG | - | chr3_3:48813746-48813765 | Msa0455770:intron | 40.0% | |
| ! | GGGAGTGACGAACTTTTTAT+AGG | + | chr3_3:48814006-48814025 | None:intergenic | 40.0% |
| GAGACGTACATTGAGAAAGA+GGG | + | chr3_3:48814030-48814049 | None:intergenic | 40.0% | |
| ATGAAGATCTGGGTTTCAGA+TGG | + | chr3_3:48814108-48814127 | None:intergenic | 40.0% | |
| TGTGAGAGTGATGAAGATCT+GGG | + | chr3_3:48814118-48814137 | None:intergenic | 40.0% | |
| TCACTTTCCTTCAATCTCAC+CGG | - | chr3_3:48814145-48814164 | Msa0455770:intron | 40.0% | |
| TCACCCTCAATCTTACATCT+TGG | - | chr3_3:48814171-48814190 | Msa0455770:intron | 40.0% | |
| GGAACCAAGATGTAAGATTG+AGG | + | chr3_3:48814178-48814197 | None:intergenic | 40.0% | |
| TCTCCTACTTCAGTTTCTCA+AGG | - | chr3_3:48814481-48814500 | Msa0455770:intron | 40.0% | |
| TTATCCACGTTTGGGAAAAG+TGG | + | chr3_3:48814820-48814839 | None:intergenic | 40.0% | |
| AGGCTAACAAAACATGGTCT+AGG | - | chr3_3:48814932-48814951 | Msa0455770:intron | 40.0% | |
| GGCTAACAAAACATGGTCTA+GGG | - | chr3_3:48814933-48814952 | Msa0455770:intron | 40.0% | |
| !!! | GTCGCAATCTGCCATTTTAA+AGG | - | chr3_3:48815690-48815709 | Msa0455770:CDS | 40.0% |
| ATTCCTATACCGGACGATTA+GGG | + | chr3_3:48815892-48815911 | None:intergenic | 40.0% | |
| TCATGACACGATTCCTATAC+CGG | + | chr3_3:48815902-48815921 | None:intergenic | 40.0% | |
| CAGGTTGTATTGTAGACATG+TGG | - | chr3_3:48816100-48816119 | Msa0455770:intron | 40.0% | |
| TTCAGATAATCAGGTCGGTA+TGG | - | chr3_3:48816213-48816232 | Msa0455770:intron | 40.0% | |
| AATCCATATCATCTTGCAGC+GGG | + | chr3_3:48816283-48816302 | None:intergenic | 40.0% | |
| GTTACATTTGGTATCAGAGC+AGG | - | chr3_3:48816472-48816491 | Msa0455770:intron | 40.0% | |
| GCTGTAACAGCGTTACATAA+CGG | + | chr3_3:48816807-48816826 | None:intergenic | 40.0% | |
| ! | GAGTTGATTGTGTCTTTGTG+TGG | - | chr3_3:48817087-48817106 | Msa0455770:CDS | 40.0% |
| GGAATCTGTGTATGAGAGTT+TGG | - | chr3_3:48817108-48817127 | Msa0455770:CDS | 40.0% | |
| AGATGATTAGGGAAATGACG+TGG | + | chr3_3:48817482-48817501 | None:intergenic | 40.0% | |
| CATCAGTATGATGATCCATG+GGG | + | chr3_3:48817561-48817580 | None:intergenic | 40.0% | |
| AAGTGTGTCCCCTATGTATA+GGG | - | chr3_3:48817700-48817719 | Msa0455770:intron | 40.0% | |
| ! | AAAGCCAATTTTCCCTGGAA+AGG | + | chr3_3:48817749-48817768 | None:intergenic | 40.0% |
| TGCATTCTTGCTGAGATTCT+TGG | + | chr3_3:48817775-48817794 | None:intergenic | 40.0% | |
| TCACATGCTAATAGAAGCTC+TGG | - | chr3_3:48817821-48817840 | Msa0455770:CDS | 40.0% | |
| GTGAGCCATAGTGAGATTGA+AGG | + | chr3_3:48811330-48811349 | None:intergenic | 45.0% | |
| GAGGATGGATGTGAGATTGA+GGG | + | chr3_3:48811352-48811371 | None:intergenic | 45.0% | |
| TGAGGATGGATGTGAGATTG+AGG | + | chr3_3:48811353-48811372 | None:intergenic | 45.0% | |
| GCGTCATCGTAGAAGAAGAA+AGG | + | chr3_3:48811410-48811429 | None:intergenic | 45.0% | |
| CGGAACTTATTCCCAATTCG+AGG | + | chr3_3:48811490-48811509 | None:intergenic | 45.0% | |
| TTCCGTCTTGGGAGGAAAAT+TGG | - | chr3_3:48811505-48811524 | Msa0455770:intron | 45.0% | |
| CTTGGGAGGAAAATTGGTAG+CGG | - | chr3_3:48811511-48811530 | Msa0455770:intron | 45.0% | |
| AGTTGGGAGCTTACAGACTA+TGG | + | chr3_3:48812024-48812043 | None:intergenic | 45.0% | |
| CTGGGATACCGAATGTGAAA+TGG | - | chr3_3:48812141-48812160 | Msa0455770:intron | 45.0% | |
| ACACCGGACCATTTCACATT+CGG | + | chr3_3:48812152-48812171 | None:intergenic | 45.0% | |
| ATTGTACTCTCCTTCGACAC+CGG | + | chr3_3:48812168-48812187 | None:intergenic | 45.0% | |
| GGCCAAGTAAATCCATCACT+AGG | + | chr3_3:48812193-48812212 | None:intergenic | 45.0% | |
| !! | TTTACTTGGCCCTAGTCTTG+AGG | - | chr3_3:48812202-48812221 | Msa0455770:intron | 45.0% |
| ATTTCCTCATGGGTTTAGGG+AGG | - | chr3_3:48812432-48812451 | Msa0455770:intron | 45.0% | |
| CACATCAGCATATTCCCTAC+AGG | - | chr3_3:48812611-48812630 | Msa0455770:intron | 45.0% | |
| !!! | CTTTCCTGGTTTTGCATTCC+TGG | - | chr3_3:48812920-48812939 | Msa0455770:intron | 45.0% |
| AATGCCAGGAATGCAAAACC+AGG | + | chr3_3:48812927-48812946 | None:intergenic | 45.0% | |
| TATTACACACCCCAGAGAGA+AGG | + | chr3_3:48813426-48813445 | None:intergenic | 45.0% | |
| GCGACTCTAAATCATCCCTA+CGG | + | chr3_3:48813765-48813784 | None:intergenic | 45.0% | |
| ! | AGGGATGATTTAGAGTCGCT+CGG | - | chr3_3:48813766-48813785 | Msa0455770:intron | 45.0% |
| CGTACATTGAGAAAGAGGGA+GGG | + | chr3_3:48814026-48814045 | None:intergenic | 45.0% | |
| ACGTACATTGAGAAAGAGGG+AGG | + | chr3_3:48814027-48814046 | None:intergenic | 45.0% | |
| GGAGACGTACATTGAGAAAG+AGG | + | chr3_3:48814031-48814050 | None:intergenic | 45.0% | |
| GTGTGAGAGTGATGAAGATC+TGG | + | chr3_3:48814119-48814138 | None:intergenic | 45.0% | |
| TTTCTGCGATTGAGGGTGAT+AGG | + | chr3_3:48814293-48814312 | None:intergenic | 45.0% | |
| !! | TGTGCAATTGGGTTTTGTCG+TGG | - | chr3_3:48814430-48814449 | Msa0455770:intron | 45.0% |
| !! | GTGCAATTGGGTTTTGTCGT+GGG | - | chr3_3:48814431-48814450 | Msa0455770:intron | 45.0% |
| AGCTGAAGAACTGCAAACCA+CGG | + | chr3_3:48814462-48814481 | None:intergenic | 45.0% | |
| CACATGCCTGAAAAGATGAC+AGG | + | chr3_3:48814718-48814737 | None:intergenic | 45.0% | |
| GTCAGCCTTGCAAAGAATGT+CGG | - | chr3_3:48814737-48814756 | Msa0455770:intron | 45.0% | |
| TCTCTCCGACATTCTTTGCA+AGG | + | chr3_3:48814745-48814764 | None:intergenic | 45.0% | |
| ! | TGAGAACAGTGTTGTTCGAG+AGG | - | chr3_3:48814765-48814784 | Msa0455770:intron | 45.0% |
| ! | GAGAACAGTGTTGTTCGAGA+GGG | - | chr3_3:48814766-48814785 | Msa0455770:intron | 45.0% |
| GCCTCACTATATTTGCTTCG+AGG | - | chr3_3:48814854-48814873 | Msa0455770:intron | 45.0% | |
| GCCTCGAAGCAAATATAGTG+AGG | + | chr3_3:48814858-48814877 | None:intergenic | 45.0% | |
| TATTTGCTTCGAGGCAGTCA+TGG | - | chr3_3:48814863-48814882 | Msa0455770:intron | 45.0% | |
| CGCAAGTGAGGAGATTCAAA+TGG | + | chr3_3:48815532-48815551 | None:intergenic | 45.0% | |
| GCAGATTGCGACTGTTAGAA+GGG | + | chr3_3:48815682-48815701 | None:intergenic | 45.0% | |
| ! | TAGGTTTTCCCCTAATCGTC+CGG | - | chr3_3:48815880-48815899 | Msa0455770:intron | 45.0% |
| TTCCTATACCGGACGATTAG+GGG | + | chr3_3:48815891-48815910 | None:intergenic | 45.0% | |
| GATTCCTATACCGGACGATT+AGG | + | chr3_3:48815893-48815912 | None:intergenic | 45.0% | |
| CTAATTCATACGTGTCACGG+CGG | + | chr3_3:48815989-48816008 | None:intergenic | 45.0% | |
| TGCATACTAGATTCCGTCGT+AGG | + | chr3_3:48816037-48816056 | None:intergenic | 45.0% | |
| GACGGTTGATTATACGTGTG+TGG | + | chr3_3:48816081-48816100 | None:intergenic | 45.0% | |
| CACACGTATAATCAACCGTC+AGG | - | chr3_3:48816081-48816100 | Msa0455770:intron | 45.0% | |
| GTTACCTATAGCCTAGGGTT+AGG | - | chr3_3:48816146-48816165 | Msa0455770:intron | 45.0% | |
| TCTACCTAACCCTAGGCTAT+AGG | + | chr3_3:48816153-48816172 | None:intergenic | 45.0% | |
| AGTGAGTTCTACCTAACCCT+AGG | + | chr3_3:48816160-48816179 | None:intergenic | 45.0% | |
| CGGTATGGCAAGCTAGTAAA+CGG | - | chr3_3:48816228-48816247 | Msa0455770:intron | 45.0% | |
| ATGGCAAGCTAGTAAACGGA+TGG | - | chr3_3:48816232-48816251 | Msa0455770:intron | 45.0% | |
| ! | GTCGATTCAGATCGTGTCAT+GGG | - | chr3_3:48816494-48816513 | Msa0455770:intron | 45.0% |
| AACATTTACCCGGAACCCAA+TGG | + | chr3_3:48816548-48816567 | None:intergenic | 45.0% | |
| TGTTTCGCAGTTGTAACGGT+CGG | + | chr3_3:48816877-48816896 | None:intergenic | 45.0% | |
| TGCCTCCTCTTCAATCTTCA+TGG | - | chr3_3:48816958-48816977 | Msa0455770:CDS | 45.0% | |
| AAAGAAGAAGGTGAGGTGAG+AGG | - | chr3_3:48817210-48817229 | Msa0455770:intron | 45.0% | |
| AAGGTGAGGTGAGAGGAATT+GGG | - | chr3_3:48817217-48817236 | Msa0455770:intron | 45.0% | |
| TGGACGTTGCGTACATATTG+CGG | + | chr3_3:48817354-48817373 | None:intergenic | 45.0% | |
| TTCATGGTTTCGGACTGTCA+TGG | + | chr3_3:48817374-48817393 | None:intergenic | 45.0% | |
| AAACCTTGCTAAGCAGCTTC+AGG | - | chr3_3:48817435-48817454 | Msa0455770:intron | 45.0% | |
| AACCTTGCTAAGCAGCTTCA+GGG | - | chr3_3:48817436-48817455 | Msa0455770:intron | 45.0% | |
| GGATTGACTAGAACTTGAGC+AGG | - | chr3_3:48817528-48817547 | Msa0455770:intron | 45.0% | |
| TGACTAGAACTTGAGCAGGA+AGG | - | chr3_3:48817532-48817551 | Msa0455770:intron | 45.0% | |
| ! | ATGGCTAATGGATCTGCTTG+TGG | - | chr3_3:48817664-48817683 | Msa0455770:intron | 45.0% |
| ! | TGGCTAATGGATCTGCTTGT+GGG | - | chr3_3:48817665-48817684 | Msa0455770:intron | 45.0% |
| GAAGTGTGTCCCCTATGTAT+AGG | - | chr3_3:48817699-48817718 | Msa0455770:intron | 45.0% | |
| TGGTGCAACAAATCCTTTCC+AGG | - | chr3_3:48817733-48817752 | Msa0455770:intron | 45.0% | |
| GGTGCAACAAATCCTTTCCA+GGG | - | chr3_3:48817734-48817753 | Msa0455770:intron | 45.0% | |
| ! | GGTAGAAAGCCAATTTTCCC+TGG | + | chr3_3:48817754-48817773 | None:intergenic | 45.0% |
| CTCAGCAAGAATGCATCCTA+CGG | - | chr3_3:48817780-48817799 | Msa0455770:intron | 45.0% | |
| ATTACGGAACATCCATCCGT+AGG | + | chr3_3:48817799-48817818 | None:intergenic | 45.0% | |
| CAGAGTATATTGTCACGCGT+TGG | + | chr3_3:48817856-48817875 | None:intergenic | 45.0% | |
| CCTCGGACCAATCAAGTTAA+TGG | + | chr3_3:48817890-48817909 | None:intergenic | 45.0% | |
| ! | CCATTAACTTGATTGGTCCG+AGG | - | chr3_3:48817887-48817906 | Msa0455770:five_prime_UTR | 45.0% |
| TGAGCAAATTTGCAGGCTTC+AGG | - | chr3_3:48817952-48817971 | Msa0455770:five_prime_UTR | 45.0% | |
| !!! | TATTATTTTTTTAGATAATT+TGG | - | chr3_3:48813165-48813184 | Msa0455770:intron | 5.0% |
| AAGAAGAAAGGGGGAGAGTG+AGG | + | chr3_3:48811398-48811417 | None:intergenic | 50.0% | |
| GGAATAAGTTCCGTCTTGGG+AGG | - | chr3_3:48811497-48811516 | Msa0455770:intron | 50.0% | |
| CTTTGCACAGGGAACTTTCC+TGG | - | chr3_3:48812906-48812925 | Msa0455770:intron | 50.0% | |
| CTGGTGTAACAGGTCATGCA+AGG | + | chr3_3:48812992-48813011 | None:intergenic | 50.0% | |
| !! | ACGAACGATTTGGTGGTGAC+AGG | + | chr3_3:48814260-48814279 | None:intergenic | 50.0% |
| ! | GGGTGAAACGAACGATTTGG+TGG | + | chr3_3:48814267-48814286 | None:intergenic | 50.0% |
| CGTGGGTGAAACGAACGATT+TGG | + | chr3_3:48814270-48814289 | None:intergenic | 50.0% | |
| !! | GCTTCCACTTTTCCCAAACG+TGG | - | chr3_3:48814813-48814832 | Msa0455770:intron | 50.0% |
| TCAAGGGACTTGCGACAGTT+GGG | + | chr3_3:48815506-48815525 | None:intergenic | 50.0% | |
| TTCAAGGGACTTGCGACAGT+TGG | + | chr3_3:48815507-48815526 | None:intergenic | 50.0% | |
| ! | AACTGTCGCAGTGCCTTTTG+CGG | - | chr3_3:48815561-48815580 | Msa0455770:intron | 50.0% |
| TTGGTGCGGCTGTTCTATGA+AGG | - | chr3_3:48815587-48815606 | Msa0455770:intron | 50.0% | |
| TGGTGCGGCTGTTCTATGAA+GGG | - | chr3_3:48815588-48815607 | Msa0455770:intron | 50.0% | |
| GGCAGATTGCGACTGTTAGA+AGG | + | chr3_3:48815683-48815702 | None:intergenic | 50.0% | |
| GGAAAACCTAGGATCGTCGT+CGG | + | chr3_3:48815870-48815889 | None:intergenic | 50.0% | |
| GGACGATTAGGGGAAAACCT+AGG | + | chr3_3:48815881-48815900 | None:intergenic | 50.0% | |
| TTCCCCTAATCGTCCGGTAT+AGG | - | chr3_3:48815886-48815905 | Msa0455770:intron | 50.0% | |
| TACGTGTCACGGCGGTTTAA+GGG | + | chr3_3:48815981-48816000 | None:intergenic | 50.0% | |
| ATACGTGTCACGGCGGTTTA+AGG | + | chr3_3:48815982-48816001 | None:intergenic | 50.0% | |
| TCTAGTATGCACGTCCGTCT+AGG | - | chr3_3:48816046-48816065 | Msa0455770:intron | 50.0% | |
| TGTGGTCATGCTTGCCTAGA+CGG | + | chr3_3:48816063-48816082 | None:intergenic | 50.0% | |
| TGTAGACATGTGGTGACCGT+AGG | - | chr3_3:48816110-48816129 | Msa0455770:intron | 50.0% | |
| AACCTCGGGGGAAAAACCTA+CGG | + | chr3_3:48816129-48816148 | None:intergenic | 50.0% | |
| TAGGCTATAGGTAACCTCGG+GGG | + | chr3_3:48816141-48816160 | None:intergenic | 50.0% | |
| CTAGGCTATAGGTAACCTCG+GGG | + | chr3_3:48816142-48816161 | None:intergenic | 50.0% | |
| CCTAGGCTATAGGTAACCTC+GGG | + | chr3_3:48816143-48816162 | None:intergenic | 50.0% | |
| CCCTAGGCTATAGGTAACCT+CGG | + | chr3_3:48816144-48816163 | None:intergenic | 50.0% | |
| CCGAGGTTACCTATAGCCTA+GGG | - | chr3_3:48816141-48816160 | Msa0455770:intron | 50.0% | |
| GTACCCGCTGCAAGATGATA+TGG | - | chr3_3:48816277-48816296 | Msa0455770:intron | 50.0% | |
| ! | GGTCGATTCAGATCGTGTCA+TGG | - | chr3_3:48816493-48816512 | Msa0455770:intron | 50.0% |
| AACTAAGGTAGGGGGACCAT+TGG | - | chr3_3:48816529-48816548 | Msa0455770:intron | 50.0% | |
| ACTAAGGTAGGGGGACCATT+GGG | - | chr3_3:48816530-48816549 | Msa0455770:intron | 50.0% | |
| ! | GTGGTCGTAACGGTGTTTTG+AGG | + | chr3_3:48816829-48816848 | None:intergenic | 50.0% |
| !! | GGCGAGTTTTGTGGTCGTAA+CGG | + | chr3_3:48816839-48816858 | None:intergenic | 50.0% |
| ! | AGTTGTAACGGTCGGTTTCG+CGG | + | chr3_3:48816869-48816888 | None:intergenic | 50.0% |
| GGCCATGAAGATTGAAGAGG+AGG | + | chr3_3:48816963-48816982 | None:intergenic | 50.0% | |
| GGAGGCCATGAAGATTGAAG+AGG | + | chr3_3:48816966-48816985 | None:intergenic | 50.0% | |
| GAAGGTGAGGTGAGAGGAAT+TGG | - | chr3_3:48817216-48817235 | Msa0455770:intron | 50.0% | |
| TGAGAGGAATTGGGCGTAGT+TGG | - | chr3_3:48817226-48817245 | Msa0455770:intron | 50.0% | |
| GAGAGGAATTGGGCGTAGTT+GGG | - | chr3_3:48817227-48817246 | Msa0455770:intron | 50.0% | |
| GAATTGGGCGTAGTTGGGTT+AGG | - | chr3_3:48817232-48817251 | Msa0455770:intron | 50.0% | |
| CGTACATATTGCGGTCGTTG+TGG | + | chr3_3:48817345-48817364 | None:intergenic | 50.0% | |
| ! | CGGTCGCGTTAACGTTTTCA+TGG | + | chr3_3:48817390-48817409 | None:intergenic | 50.0% |
| GCAAGAATGCATCCTACGGA+TGG | - | chr3_3:48817784-48817803 | Msa0455770:intron | 50.0% | |
| ! | GTGAAATGGTCCGGTGTCGA+AGG | - | chr3_3:48812155-48812174 | Msa0455770:intron | 55.0% |
| CCAGAGAGAAGGAGAGAGTC+GGG | + | chr3_3:48813415-48813434 | None:intergenic | 55.0% | |
| CCCAGAGAGAAGGAGAGAGT+CGG | + | chr3_3:48813416-48813435 | None:intergenic | 55.0% | |
| CCGACTCTCTCCTTCTCTCT+GGG | - | chr3_3:48813413-48813432 | Msa0455770:intron | 55.0% | |
| CGACTCTCTCCTTCTCTCTG+GGG | - | chr3_3:48813414-48813433 | Msa0455770:intron | 55.0% | |
| GTAAGATTGAGGGTGAGCGC+CGG | + | chr3_3:48814167-48814186 | None:intergenic | 55.0% | |
| !! | GATTTGGTGGTGACAGGCGA+GGG | + | chr3_3:48814254-48814273 | None:intergenic | 55.0% |
| CGATTGAGGGTGATAGGCGT+GGG | + | chr3_3:48814287-48814306 | None:intergenic | 55.0% | |
| ! | TTTTGTCGTGGGTTTCGCCG+TGG | - | chr3_3:48814442-48814461 | Msa0455770:intron | 55.0% |
| CTTCGAGGCAGTCATGGAGA+AGG | - | chr3_3:48814869-48814888 | Msa0455770:intron | 55.0% | |
| GACTTGCGACAGTTGGGGAA+GGG | + | chr3_3:48815500-48815519 | None:intergenic | 55.0% | |
| CAAGGGACTTGCGACAGTTG+GGG | + | chr3_3:48815505-48815524 | None:intergenic | 55.0% | |
| GTTGCTAAGGGTCGCAAGTG+AGG | + | chr3_3:48815544-48815563 | None:intergenic | 55.0% | |
| GGCACTGCGACAGTTGCTAA+GGG | + | chr3_3:48815556-48815575 | None:intergenic | 55.0% | |
| ! | AGGCACTGCGACAGTTGCTA+AGG | + | chr3_3:48815557-48815576 | None:intergenic | 55.0% |
| ACCCCAACATCCGTGACTGT+TGG | - | chr3_3:48815629-48815648 | Msa0455770:intron | 55.0% | |
| CCCAACAGTCACGGATGTTG+GGG | + | chr3_3:48815633-48815652 | None:intergenic | 55.0% | |
| CCCCAACATCCGTGACTGTT+GGG | - | chr3_3:48815630-48815649 | Msa0455770:intron | 55.0% | |
| CCCCAACAGTCACGGATGTT+GGG | + | chr3_3:48815634-48815653 | None:intergenic | 55.0% | |
| CCCAACATCCGTGACTGTTG+GGG | - | chr3_3:48815631-48815650 | Msa0455770:intron | 55.0% | |
| TCCCCAACAGTCACGGATGT+TGG | + | chr3_3:48815635-48815654 | None:intergenic | 55.0% | |
| ACATCCGTGACTGTTGGGGA+AGG | - | chr3_3:48815635-48815654 | Msa0455770:intron | 55.0% | |
| CATCCGTGACTGTTGGGGAA+GGG | - | chr3_3:48815636-48815655 | Msa0455770:intron | 55.0% | |
| GATGAACCGACGACGATCCT+AGG | - | chr3_3:48815861-48815880 | Msa0455770:intron | 55.0% | |
| CCCGAGGTTACCTATAGCCT+AGG | - | chr3_3:48816140-48816159 | Msa0455770:intron | 55.0% | |
| ! | GGCTGTAACGGCGAGTTTTG+TGG | + | chr3_3:48816848-48816867 | None:intergenic | 55.0% |
| ! | GGCGTAGTTGGGTTAGGTGA+GGG | - | chr3_3:48817238-48817257 | Msa0455770:intron | 55.0% |
| ! | AACGGTAACGGTTGCGGTCA+CGG | + | chr3_3:48817410-48817429 | None:intergenic | 55.0% |
| CACCCTGAAGCTGCTTAGCA+AGG | + | chr3_3:48817441-48817460 | None:intergenic | 55.0% | |
| CTTGCTAAGCAGCTTCAGGG+TGG | - | chr3_3:48817439-48817458 | Msa0455770:intron | 55.0% | |
| TGAGCAGGAAGGTTACCCCA+TGG | - | chr3_3:48817543-48817562 | Msa0455770:intron | 55.0% | |
| CACGCCTCCCTAAACCCATG+AGG | + | chr3_3:48812439-48812458 | None:intergenic | 60.0% | |
| CCCGACTCTCTCCTTCTCTC+TGG | - | chr3_3:48813412-48813431 | Msa0455770:intron | 60.0% | |
| !! | GTGAGCGCCGGTGAGATTGA+AGG | + | chr3_3:48814155-48814174 | None:intergenic | 60.0% |
| !! | CGATTTGGTGGTGACAGGCG+AGG | + | chr3_3:48814255-48814274 | None:intergenic | 60.0% |
| GCGATTGAGGGTGATAGGCG+TGG | + | chr3_3:48814288-48814307 | None:intergenic | 60.0% | |
| GGACTTGCGACAGTTGGGGA+AGG | + | chr3_3:48815501-48815520 | None:intergenic | 60.0% | |
| ! | GCAGTGCCTTTTGCGGCAGT+TGG | - | chr3_3:48815568-48815587 | Msa0455770:intron | 60.0% |
| !! | GCCTTTTGCGGCAGTTGGTG+CGG | - | chr3_3:48815573-48815592 | Msa0455770:intron | 60.0% |
| CGACCCTTCCCCAACAGTCA+CGG | + | chr3_3:48815642-48815661 | None:intergenic | 60.0% | |
| ! | GACCGTAGGTTTTTCCCCCG+AGG | - | chr3_3:48816124-48816143 | Msa0455770:intron | 60.0% |
| GTAGGGGGACCATTGGGTTC+CGG | - | chr3_3:48816536-48816555 | Msa0455770:intron | 60.0% | |
| TAGGGGGACCATTGGGTTCC+GGG | - | chr3_3:48816537-48816556 | Msa0455770:intron | 60.0% | |
| ! | GGTCGGTTTCGCGGCTGTAA+CGG | + | chr3_3:48816860-48816879 | None:intergenic | 60.0% |
| ! | GGGCGTAGTTGGGTTAGGTG+AGG | - | chr3_3:48817237-48817256 | Msa0455770:intron | 60.0% |
| GTGACTTCGGACTTGCGCCT+CGG | + | chr3_3:48817907-48817926 | None:intergenic | 60.0% | |
| !! | TTGGTGGTGACAGGCGAGGG+TGG | + | chr3_3:48814251-48814270 | None:intergenic | 65.0% |
| GCCGCACCAACTGCCGCAAA+AGG | + | chr3_3:48815577-48815596 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 48811304 | 48818047 | 48811304 | ID=Msa0455770;Name=Msa0455770 |
| chr3_3 | mRNA | 48811304 | 48818047 | 48811304 | ID=Msa0455770-mRNA-1;Parent=Msa0455770;Name=Msa0455770-mRNA-1;_AED=0.26;_eAED=0.26;_QI=177|0.44|0.5|0.9|0.88|0.9|10|0|231 |
| chr3_3 | exon | 48811304 | 48811384 | 48811304 | ID=Msa0455770-mRNA-1:exon:9211;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48814502 | 48814620 | 48814502 | ID=Msa0455770-mRNA-1:exon:9210;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48815394 | 48815426 | 48815394 | ID=Msa0455770-mRNA-1:exon:9209;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48815533 | 48815538 | 48815533 | ID=Msa0455770-mRNA-1:exon:9208;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48815684 | 48815745 | 48815684 | ID=Msa0455770-mRNA-1:exon:9207;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48816719 | 48816786 | 48816719 | ID=Msa0455770-mRNA-1:exon:9206;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48816885 | 48816980 | 48816885 | ID=Msa0455770-mRNA-1:exon:9205;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48817062 | 48817210 | 48817062 | ID=Msa0455770-mRNA-1:exon:9204;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48817375 | 48817380 | 48817375 | ID=Msa0455770-mRNA-1:exon:9203;Parent=Msa0455770-mRNA-1 |
| chr3_3 | exon | 48817795 | 48818047 | 48817795 | ID=Msa0455770-mRNA-1:exon:9202;Parent=Msa0455770-mRNA-1 |
| chr3_3 | five_prime_UTR | 48817871 | 48818047 | 48817871 | ID=Msa0455770-mRNA-1:five_prime_utr;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48817795 | 48817870 | 48817795 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48817375 | 48817380 | 48817375 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48817062 | 48817210 | 48817062 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48816885 | 48816980 | 48816885 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48816719 | 48816786 | 48816719 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48815684 | 48815745 | 48815684 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48815533 | 48815538 | 48815533 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48815394 | 48815426 | 48815394 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48814502 | 48814620 | 48814502 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| chr3_3 | CDS | 48811304 | 48811384 | 48811304 | ID=Msa0455770-mRNA-1:cds;Parent=Msa0455770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
