AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0456100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0456100 MtrunA17_Chr3g0103171 83.128 243 22 2 436 660 5 246 3.04e-136 399
Msa0456100 MtrunA17_Chr3g0103171 73.359 259 49 3 25 263 5 263 7.88e-126 373
Msa0456100 MtrunA17_Chr3g0103171 80.829 193 23 3 258 439 1 190 1.42e-101 310
Msa0456100 MtrunA17_Chr3g0103181 66.192 281 73 5 1 263 1 277 8.00e-115 345
Msa0456100 MtrunA17_Chr3g0103181 58.364 269 82 5 412 660 2 260 3.39e-91 284
Msa0456100 MtrunA17_Chr3g0103181 61.497 187 56 2 264 439 25 206 1.43e-68 225
Msa0456100 MtrunA17_Chr3g0103191 63.095 252 72 5 1 232 1 251 1.04e-91 284
Msa0456100 MtrunA17_Chr3g0103191 61.382 246 70 6 420 646 12 251 1.49e-86 271
Msa0456100 MtrunA17_Chr3g0103191 66.845 187 48 4 264 438 25 209 6.46e-74 238
Msa0456100 MtrunA17_Chr3g0103201 59.898 197 74 4 463 657 5 198 4.81e-71 229
Msa0456100 MtrunA17_Chr3g0103201 62.136 206 64 5 69 263 16 218 1.87e-70 228
Msa0456100 MtrunA17_Chr3g0103201 59.124 137 54 2 304 439 12 147 6.28e-47 165
Msa0456100 MtrunA17_Chr3g0103151 70.886 158 29 2 1 141 1 158 1.33e-67 218
Msa0456100 MtrunA17_Chr3g0103151 73.134 134 25 1 264 386 25 158 9.06e-63 205
Msa0456100 MtrunA17_Chr3g0103151 66.000 150 30 2 420 551 12 158 2.03e-59 196
Msa0456100 MtrunA17_Chr3g0103161 64.103 117 40 1 147 263 7 121 8.31e-40 142
Msa0456100 MtrunA17_Chr3g0103161 58.252 103 40 2 555 657 2 101 3.61e-28 109
Msa0456100 MtrunA17_Chr1g0208771 27.352 457 240 15 262 657 10 435 3.03e-31 127
Msa0456100 MtrunA17_Chr1g0208771 29.167 288 147 8 21 262 10 286 1.19e-27 116
Msa0456100 MtrunA17_Chr1g0208771 43.636 110 59 2 156 263 347 455 2.29e-16 82.4
Msa0456100 MtrunA17_Chr8g0390841 30.149 335 171 11 4 291 31 349 3.88e-31 128
Msa0456100 MtrunA17_Chr8g0390841 23.566 488 261 15 250 657 40 495 3.33e-24 107
Msa0456100 MtrunA17_Chr8g0390841 36.709 158 66 9 137 263 361 515 3.51e-11 66.2
Msa0456100 MtrunA17_Chr1g0163071 29.210 291 143 9 26 262 2 283 2.21e-29 119
Msa0456100 MtrunA17_Chr1g0163071 28.685 251 136 6 265 472 2 252 2.46e-26 110
Msa0456100 MtrunA17_Chr1g0163071 25.556 270 145 7 437 657 2 264 7.69e-21 94.0
Msa0456100 MtrunA17_Chr1g0163251 29.304 273 166 8 12 262 9 276 1.75e-27 115
Msa0456100 MtrunA17_Chr1g0163251 30.876 217 129 5 264 465 20 230 2.03e-21 97.1
Msa0456100 MtrunA17_Chr1g0163251 28.571 245 145 7 436 657 20 257 6.60e-19 89.4
Msa0456100 MtrunA17_Chr7g0233561 29.530 298 164 11 9 263 15 309 1.67e-26 110
Msa0456100 MtrunA17_Chr7g0233561 38.384 99 50 1 250 337 19 117 1.61e-16 81.3
Msa0456100 MtrunA17_Chr7g0233561 36.634 101 45 3 420 502 18 117 5.50e-13 70.5
Msa0456100 MtrunA17_Chr4g0009491 23.366 505 248 15 16 466 3 422 3.03e-25 108
Msa0456100 MtrunA17_Chr3g0077411 22.961 466 235 11 11 421 24 420 4.52e-25 109
Msa0456100 MtrunA17_Chr3g0077411 26.923 286 162 8 1 262 251 513 1.16e-17 86.7
Msa0456100 MtrunA17_Chr3g0131891 30.000 300 150 11 9 263 16 300 5.30e-25 106
Msa0456100 MtrunA17_Chr3g0131891 35.644 101 54 1 247 336 17 117 5.76e-12 67.4
Msa0456100 MtrunA17_Chr1g0163181 28.283 297 147 9 14 262 11 289 3.10e-24 106
Msa0456100 MtrunA17_Chr1g0163181 24.080 299 157 10 264 511 20 299 8.97e-17 83.2
Msa0456100 MtrunA17_Chr7g0233521 30.112 269 147 9 26 263 2 260 4.55e-22 96.7
Msa0456100 MtrunA17_Chr7g0233521 30.542 203 107 7 264 445 1 190 1.35e-15 77.8
Msa0456100 MtrunA17_Chr7g0233521 25.292 257 146 9 436 660 1 243 8.12e-12 66.6
Msa0456100 MtrunA17_Chr1g0163131 27.152 302 173 9 2 262 8 303 5.08e-21 94.4
Msa0456100 MtrunA17_Chr1g0163131 35.455 110 59 2 265 362 34 143 7.45e-15 75.9
Msa0456100 MtrunA17_Chr1g0163131 25.912 274 159 8 421 657 18 284 3.81e-13 70.9
Msa0456100 MtrunA17_Chr7g0233531 28.352 261 162 8 26 263 2 260 1.03e-20 92.8
Msa0456100 MtrunA17_Chr7g0233531 37.209 86 43 1 264 338 1 86 2.52e-11 65.1
Msa0456100 MtrunA17_Chr3g0077461 27.103 321 158 8 257 501 15 335 1.47e-19 92.0
Msa0456100 MtrunA17_Chr3g0077461 26.692 266 138 10 11 259 236 461 2.42e-13 72.8
Msa0456100 MtrunA17_Chr3g0077461 38.202 89 42 2 20 97 19 105 4.01e-11 65.9
Msa0456100 MtrunA17_Chr5g0429931 26.908 249 151 5 25 262 10 238 3.10e-19 87.8
Msa0456100 MtrunA17_Chr5g0429931 28.986 207 101 7 260 446 6 186 2.59e-13 70.5
Msa0456100 MtrunA17_Chr5g0429931 27.344 256 124 10 425 656 1 218 3.39e-12 67.0
Msa0456100 MtrunA17_Chr1g0163261 25.357 280 177 6 9 262 6 279 3.31e-19 89.0
Msa0456100 MtrunA17_Chr1g0163261 26.389 216 127 6 250 445 10 213 2.08e-15 77.4
Msa0456100 MtrunA17_Chr1g0163261 23.887 247 153 5 436 657 24 260 6.03e-13 70.1
Msa0456100 MtrunA17_Chr7g0233571 29.245 212 114 6 9 184 7 218 3.50e-19 87.0
Msa0456100 MtrunA17_Chr7g0233571 29.213 178 86 5 265 405 26 200 1.12e-14 73.9
Msa0456100 MtrunA17_Chr7g0233571 25.561 223 108 7 420 598 10 218 8.37e-11 62.4
Msa0456100 MtrunA17_Chr7g0233541 28.417 278 157 10 26 263 2 277 3.67e-19 88.6
Msa0456100 MtrunA17_Chr7g0233541 28.372 215 109 8 265 445 2 205 1.49e-13 72.0
Msa0456100 MtrunA17_Chr1g0163201 25.090 279 153 8 25 262 18 281 1.06e-18 89.0
Msa0456100 MtrunA17_Chr1g0163201 26.190 210 115 5 264 445 18 215 3.36e-14 75.1
Msa0456100 MtrunA17_Chr1g0163201 24.101 278 158 8 423 660 1 265 6.79e-12 67.8
Msa0456100 MtrunA17_Chr4g0067431 27.211 294 154 11 10 252 13 297 2.57e-18 86.7
Msa0456100 MtrunA17_Chr4g0067431 26.165 279 160 10 420 657 15 288 1.19e-12 69.7
Msa0456100 MtrunA17_Chr4g0067431 25.974 231 137 7 247 445 13 241 3.76e-11 65.1
Msa0456100 MtrunA17_Chr3g0077451 26.515 264 144 9 15 262 1 230 6.43e-18 83.6
Msa0456100 MtrunA17_Chr3g0077451 24.885 217 109 5 262 466 9 183 9.10e-13 68.6
Msa0456100 MtrunA17_Chr1g0171611 24.188 277 168 10 9 262 6 263 8.64e-18 84.3
Msa0456100 MtrunA17_Chr1g0171611 24.607 191 114 4 264 445 24 193 7.77e-12 66.6
Msa0456100 MtrunA17_Chr1g0163221 27.562 283 171 9 10 262 9 287 2.10e-17 84.3
Msa0456100 MtrunA17_Chr1g0163191 35.897 117 59 3 12 119 9 118 3.26e-16 76.6
Msa0456100 MtrunA17_Chr1g0163191 32.000 100 59 1 264 354 20 119 1.95e-13 68.6
Msa0456100 MtrunA17_Chr5g0419201 29.940 167 90 4 248 394 15 174 4.46e-16 77.0
Msa0456100 MtrunA17_Chr5g0419201 30.189 159 70 5 12 139 16 164 5.69e-15 73.9
Msa0456100 MtrunA17_Chr5g0419201 27.586 174 91 5 413 559 9 174 1.58e-11 63.9
Msa0456100 MtrunA17_Chr1g0163241 35.849 106 55 3 15 109 14 117 3.51e-15 73.9
Msa0456100 MtrunA17_Chr1g0163241 30.625 160 92 5 247 387 4 163 5.57e-15 73.2
Msa0456100 MtrunA17_Chr1g0163231 25.979 281 170 12 9 262 6 275 3.53e-15 76.6
Msa0456100 MtrunA17_Chr1g0163231 23.858 197 120 4 264 445 24 205 5.21e-13 70.5
Msa0456100 MtrunA17_Chr6g0476181 38.017 121 65 3 265 375 2 122 7.50e-15 72.8
Msa0456100 MtrunA17_Chr1g0154161 25.182 274 170 9 10 253 28 296 2.75e-14 74.7
Msa0456100 MtrunA17_Chr1g0154131 24.749 299 183 11 10 271 182 475 1.03e-13 73.9
Msa0456100 MtrunA17_Chr1g0163061 36.275 102 51 2 10 97 13 114 1.51e-13 71.6
Msa0456100 MtrunA17_Chr1g0163081 31.429 140 81 4 262 387 3 141 1.89e-13 68.2
Msa0456100 MtrunA17_Chr1g0163101 32.558 129 69 5 265 379 33 157 3.45e-13 68.6
Msa0456100 MtrunA17_Chr1g0163101 29.518 166 89 7 2 141 7 170 1.01e-12 67.0
Msa0456100 MtrunA17_Chr6g0467351 31.343 134 73 4 10 129 13 141 3.61e-13 69.7
Msa0456100 MtrunA17_Chr1g0163121 36.607 112 56 4 264 361 10 120 4.80e-13 67.0
Msa0456100 MtrunA17_Chr4g0033961 37.624 101 50 2 12 99 6 106 2.37e-12 69.3
Msa0456100 MtrunA17_Chr4g0033961 31.538 130 70 2 251 361 8 137 3.09e-12 69.3
Msa0456100 MtrunA17_Chr1g0162441 36.893 103 52 2 12 101 7 109 6.64e-12 68.2
Msa0456100 MtrunA17_Chr1g0162441 31.538 130 70 2 251 361 9 138 1.68e-11 67.0
Msa0456100 MtrunA17_Chr1g0162161 28.346 127 78 4 262 375 1 127 8.13e-12 63.9
Msa0456100 MtrunA17_Chr1g0154111 26.027 219 129 7 143 333 238 451 1.10e-11 67.8
Msa0456100 MtrunA17_Chr1g0163161 35.354 99 50 3 277 361 1 99 1.43e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0456100 AT4G01580.1 29.008 131 80 2 12 129 30 160 5.63e-12 65.5
Msa0456100 AT3G18990.1 35.354 99 51 2 12 97 6 104 2.24e-11 66.2
Msa0456100 AT3G18990.2 35.354 99 51 2 12 97 6 104 3.14e-11 66.2

Find 117 sgRNAs with CRISPR-Local

Find 822 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTCCTTGTAAACTTATT+TGG 0.115340 3_3:-49419666 None:intergenic
TATCTCCTTGTAAAATTATT+TGG 0.141454 3_3:-49426943 None:intergenic
TGTCTCCTTGTAAAATTATT+TGG 0.173452 3_3:-49434022 None:intergenic
GTACGAAATATACATTTAAA+AGG 0.208112 3_3:+49420490 Msa0456100:CDS
GCACTAAATGGAAAGTTTAT+TGG 0.220986 3_3:+49419733 Msa0456100:CDS
AAGTTTGATGTACTCATATT+TGG 0.247294 3_3:+49427141 Msa0456100:CDS
AAGTTTGATGTACTCATATT+TGG 0.247294 3_3:+49434220 Msa0456100:CDS
TGAGAACAAGGAGAAGAATT+TGG 0.263895 3_3:+49434950 Msa0456100:CDS
CGTACCAAATATACATTTAA+AGG 0.270450 3_3:+49434920 Msa0456100:CDS
TGTCTTTGAACTGATAAATA+AGG 0.271915 3_3:+49420672 Msa0456100:CDS
GGTGAGATTTGGTTCGAAAA+AGG 0.293396 3_3:+49419768 Msa0456100:CDS
AGGCTCCTGATGGCACTAAA+TGG 0.303104 3_3:+49419721 Msa0456100:CDS
AGGCTCCTGATGGCACTAAA+TGG 0.303104 3_3:+49426998 Msa0456100:CDS
AGGCTCCTGATGGCACTAAA+TGG 0.303104 3_3:+49434077 Msa0456100:CDS
CTCTTTAGAACATGGGTGTT+TGG 0.338963 3_3:+49419815 Msa0456100:intron
CTCTCTAGGACATGGGTGTT+TGG 0.346409 3_3:+49427092 Msa0456100:intron
CTCTCTAGGACATGGGTGTT+TGG 0.346409 3_3:+49434171 Msa0456100:intron
CGACTTGCACCCAGATGATT+AGG 0.350633 3_3:-49420346 None:intergenic
TCTTATACAACCTAATCATC+TGG 0.353091 3_3:+49420336 Msa0456100:CDS
TCAAAGACACAAACATCTTC+AGG 0.357243 3_3:-49420658 None:intergenic
CCAGCCTTTGAAGATTAGAT+TGG 0.362716 3_3:-49419408 None:intergenic
ATAAATGGTGAGATTTGGTT+TGG 0.369051 3_3:+49427039 Msa0456100:CDS
ATCAGAAGAGTGCTAGAAAA+AGG 0.374916 3_3:+49419979 Msa0456100:CDS
CGACCACATAAGAAATTTAG+AGG 0.377007 3_3:+49427315 Msa0456100:CDS
CGACCACATAAGAAATTTAG+AGG 0.377007 3_3:+49434394 Msa0456100:CDS
AAGAATTTGGTGCTTCAGAT+TGG 0.378151 3_3:+49434963 Msa0456100:CDS
TACGAAATATACATTTAAAA+GGG 0.385566 3_3:+49420491 Msa0456100:CDS
TCAGGAGCCTTGATCAATAC+TGG 0.386831 3_3:-49419708 None:intergenic
AATAAGTTTACAAGGAGATA+TGG 0.388747 3_3:+49419669 Msa0456100:CDS
TCTCATATTGCTTAATCATC+TGG 0.390702 3_3:+49427663 Msa0456100:CDS
CGACTTGCTACCAGATGATT+AGG 0.396572 3_3:-49434757 None:intergenic
TATTCTATTTGACCGATTCA+AGG 0.404059 3_3:-49427584 None:intergenic
TATTCTATTTGACCGATTCA+AGG 0.404059 3_3:-49434668 None:intergenic
TTGGTAATGTTCAAATATAA+AGG 0.407584 3_3:+49427111 Msa0456100:CDS
TTGGTAATGTTCAAATATAA+AGG 0.407584 3_3:+49434190 Msa0456100:CDS
TGATATGAGTCGTCGCCTTT+CGG 0.409351 3_3:+49420597 Msa0456100:CDS
ATGAGTCGTCGCCTTTCGGC+TGG 0.409621 3_3:+49420601 Msa0456100:CDS
GCACTAAATGGAAAGTGTAT+TGG 0.424100 3_3:+49427010 Msa0456100:CDS
GCACTAAATGGAAAGTGTAT+TGG 0.424100 3_3:+49434089 Msa0456100:CDS
TCTCATATTACCTAATCATC+TGG 0.431029 3_3:+49434747 Msa0456100:CDS
TGTGGTCGAGGATAAAATAA+TGG 0.434350 3_3:-49420005 None:intergenic
GTACCAAATATACATTTAAA+GGG 0.436717 3_3:+49434921 Msa0456100:CDS
ACTTTCCATTTAGTGCCATC+AGG 0.440549 3_3:-49419726 None:intergenic
GTCAAATAAATCTAGAGCTC+AGG 0.454366 3_3:+49420270 Msa0456100:CDS
AAGTTTGATGTACTAATACT+TGG 0.456775 3_3:+49419864 Msa0456100:CDS
AAAAGGGGTTATTGAGTACA+AGG 0.460319 3_3:+49420507 Msa0456100:CDS
ACTTTCCATTTAGTGCCATC+AGG 0.461061 3_3:-49427003 None:intergenic
ACTTTCCATTTAGTGCCATC+AGG 0.461061 3_3:-49434082 None:intergenic
GCCTTTGAAGATTAGATTGG+AGG 0.462449 3_3:-49419405 None:intergenic
ATACCTCTAAATTTCTTATG+TGG 0.463376 3_3:-49427318 None:intergenic
ATACCTCTAAATTTCTTATG+TGG 0.463376 3_3:-49434397 None:intergenic
TGGTGAGATTTGGTTTGGAA+GGG 0.465346 3_3:+49427044 Msa0456100:CDS
CTCATATCACGCTTGTAAGA+AGG 0.476965 3_3:-49420583 None:intergenic
CTAAATTTCTTATGTGGTCG+AGG 0.480133 3_3:-49427312 None:intergenic
CTAAATTTCTTATGTGGTCG+AGG 0.480133 3_3:-49434391 None:intergenic
ATGGTGAGATTTGGTTTGGA+AGG 0.481406 3_3:+49427043 Msa0456100:CDS
ACCACTTTCACTTGCAAACA+AGG 0.482476 3_3:-49420629 None:intergenic
CCAATCTAATCTTCAAAGGC+TGG 0.485025 3_3:+49419408 Msa0456100:CDS
TGAGTACAAGGAGAAGAATC+TGG 0.487936 3_3:+49420519 Msa0456100:CDS
ATCAAATCCGGTGTTAATCA+AGG 0.491569 3_3:+49426978 Msa0456100:CDS
ATCAAATCCGGTGTTAATCA+AGG 0.491569 3_3:+49434057 Msa0456100:CDS
CTCGTCAGCTTTCAGCCGGT+TGG 0.491680 3_3:+49435036 Msa0456100:CDS
TGGAGTTGGTCTATCAAATC+CGG 0.501360 3_3:+49426966 Msa0456100:CDS
AAAGAACTTCATCCTTGAAT+CGG 0.503587 3_3:+49427572 Msa0456100:CDS
AAAGAACTTCATCCTTGAAT+CGG 0.503587 3_3:+49434656 Msa0456100:CDS
ATTTACGAACAAGGACCAAC+CGG 0.504136 3_3:-49435051 None:intergenic
AAACTACTCAAAGCTTGAAT+CGG 0.507238 3_3:+49420248 Msa0456100:CDS
TGGAGTTGGTCTATCAAATC+CGG 0.509695 3_3:+49434045 Msa0456100:CDS
GCCGTCTCATGATTGTAAGA+AGG 0.513948 3_3:-49435014 None:intergenic
TTGGTGGTGTTTAAATATAG+AGG 0.515843 3_3:+49419834 Msa0456100:CDS
ATACCGCTAACTTTCTTATG+TGG 0.517982 3_3:-49420023 None:intergenic
ATCAAATCCAGTATTGATCA+AGG 0.527560 3_3:+49419701 Msa0456100:CDS
GGTGAGATTTGGTTTGGAAG+GGG 0.533457 3_3:+49427045 Msa0456100:CDS
CCGTCTCATGATTGTAAGAA+GGG 0.533467 3_3:-49435013 None:intergenic
TTTAGAACATGGGTGTTTGG+TGG 0.534305 3_3:+49419818 Msa0456100:intron
TCATATCACGCTTGTAAGAA+GGG 0.536564 3_3:-49420582 None:intergenic
GTCGTCGCCTTTCGGCTGGT+TGG 0.537182 3_3:+49420605 Msa0456100:CDS
CTAACTTTCTTATGTGGTCG+AGG 0.541461 3_3:-49420017 None:intergenic
CGACCACATAAGAAAGTTAG+CGG 0.545123 3_3:+49420020 Msa0456100:CDS
GTGTTAATCAAGGCTCCTGA+TGG 0.547023 3_3:+49426988 Msa0456100:CDS
GTGTTAATCAAGGCTCCTGA+TGG 0.547023 3_3:+49434067 Msa0456100:CDS
ACGGCTCGTCAGCTTTCAGC+CGG 0.550712 3_3:+49435032 Msa0456100:CDS
AAGTATTAGTACATCAAACT+TGG 0.551612 3_3:-49419862 None:intergenic
TCATCTGGGTGCAAGTCGGC+CGG 0.555792 3_3:+49420351 Msa0456100:CDS
TCCTTGTTTGCAAGTGAAAG+TGG 0.559172 3_3:+49420628 Msa0456100:CDS
AATATTACTCTTTAGAACAT+GGG 0.560162 3_3:+49419808 Msa0456100:intron
TCCTCCAATCTAATCTTCAA+AGG 0.560793 3_3:+49419404 Msa0456100:CDS
TAAATCTAGAGCTCAGGAAG+TGG 0.562638 3_3:+49420276 Msa0456100:CDS
TTCAGATTGGAGAAAGATCA+TGG 0.565384 3_3:+49434976 Msa0456100:CDS
CTTATACAACCTAATCATCT+GGG 0.566671 3_3:+49420337 Msa0456100:CDS
TTGATGTACTCATATTTGGT+CGG 0.568350 3_3:+49427145 Msa0456100:CDS
TTGATGTACTCATATTTGGT+CGG 0.568350 3_3:+49434224 Msa0456100:CDS
TACCAAATATACATTTAAAG+GGG 0.570500 3_3:+49434922 Msa0456100:CDS
ATACTCCATCATCCATGGCT+AGG 0.570539 3_3:+49419344 None:intergenic
AAATACCAAATAAGTTTACA+AGG 0.573284 3_3:+49419661 Msa0456100:CDS
TTTACAAGGAGATATGGAGT+TGG 0.576616 3_3:+49426952 Msa0456100:CDS
GGTAGTATTTCTCCTAGCCA+TGG 0.578986 3_3:-49419356 None:intergenic
TTTACAAGGAGACATGGAGT+TGG 0.583434 3_3:+49434031 Msa0456100:CDS
AAAATTACTCTCTAGGACAT+GGG 0.594435 3_3:+49427085 Msa0456100:intron
AAAATTACTCTCTAGGACAT+GGG 0.594435 3_3:+49434164 Msa0456100:intron
ACGAAATATACATTTAAAAG+GGG 0.595779 3_3:+49420492 Msa0456100:CDS
GATTGGAGAAAGATCATGGA+AGG 0.596288 3_3:+49434980 Msa0456100:CDS
ACCAAATATACATTTAAAGG+GGG 0.601858 3_3:+49434923 Msa0456100:CDS
TCCTTGTTCGTAAATGAGAG+TGG 0.603096 3_3:+49435059 Msa0456100:CDS
TCAGGAGCCTTGATTAACAC+CGG 0.606186 3_3:-49426985 None:intergenic
TCAGGAGCCTTGATTAACAC+CGG 0.606186 3_3:-49434064 None:intergenic
CCCTTCTTACAATCATGAGA+CGG 0.608388 3_3:+49435013 Msa0456100:CDS
ACAAGGACCAACCAGCCGAA+AGG 0.612648 3_3:-49420612 None:intergenic
TCCACTCTCATTTACGAACA+AGG 0.613848 3_3:-49435060 None:intergenic
TCATCTGGTAGCAAGTCGGC+CGG 0.615452 3_3:+49434762 Msa0456100:CDS
TCATCTGGTAGCAAGTCGGC+CGG 0.617935 3_3:+49427678 Msa0456100:CDS
GTATTGATCAAGGCTCCTGA+TGG 0.618691 3_3:+49419711 Msa0456100:CDS
GATGATGAGAATGACAATGT+TGG 0.639579 3_3:+49427207 Msa0456100:CDS
GATGATGAGAATGACAATGT+TGG 0.639579 3_3:+49434286 Msa0456100:CDS
CTAATCATCTGGTAGCAAGT+CGG 0.660416 3_3:+49434758 Msa0456100:CDS
CTAATCATCTGGGTGCAAGT+CGG 0.662539 3_3:+49420347 Msa0456100:CDS
TTAATCATCTGGTAGCAAGT+CGG 0.682423 3_3:+49427674 Msa0456100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATATTTTATAATATAAA+AGG + chr3_3:49425716-49425735 Msa0456100:intron 0.0%
!! TAATGTCTTTAAATTAAAAA+AGG + chr3_3:49421489-49421508 Msa0456100:intron 10.0%
!!! ATGTAATTTTTTTTCATTAA+AGG + chr3_3:49422642-49422661 Msa0456100:intron 10.0%
!!! TGTAATTTTTTTTCATTAAA+GGG + chr3_3:49422643-49422662 Msa0456100:intron 10.0%
!!! TTAATTCCTTTAAAAAAAAT+TGG - chr3_3:49425839-49425858 None:intergenic 10.0%
!!! AAAAAATAAATACTTTTTTC+TGG - chr3_3:49425915-49425934 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTCAAC+TGG + chr3_3:49426059-49426078 Msa0456100:intron 10.0%
!!! AATTTATTTATTTTCTTTGT+TGG + chr3_3:49426776-49426795 Msa0456100:intron 10.0%
!!! TATTGTTTTTAAGAAAAAAA+AGG + chr3_3:49430116-49430135 Msa0456100:intron 10.0%
!!! ATTGTTTTTAAGAAAAAAAA+GGG + chr3_3:49430117-49430136 Msa0456100:intron 10.0%
!!! TTATTTATATCAAAATTTTG+TGG + chr3_3:49430929-49430948 Msa0456100:intron 10.0%
!!! TATTTATATCAAAATTTTGT+GGG + chr3_3:49430930-49430949 Msa0456100:intron 10.0%
!! AACTTGTAAAAAAAAAAAAT+TGG + chr3_3:49431549-49431568 Msa0456100:intron 10.0%
!! TATAACATAAATGATTAAAT+AGG + chr3_3:49431867-49431886 Msa0456100:intron 10.0%
!!! AAAAAATAAAAACTTTTTTC+TGG - chr3_3:49432048-49432067 None:intergenic 10.0%
!! TTAAAGAAAAAATAATACTT+TGG - chr3_3:49432629-49432648 None:intergenic 10.0%
!!! ATTTTGAGAAAAATAAAAAA+CGG + chr3_3:49433402-49433421 Msa0456100:intron 10.0%
!!! ATTTGTTGATTTATTATACT+TGG + chr3_3:49420064-49420083 Msa0456100:intron 15.0%
!!! TTTGTTGATTTATTATACTT+GGG + chr3_3:49420065-49420084 Msa0456100:intron 15.0%
!! TACGAAATATACATTTAAAA+GGG + chr3_3:49420491-49420510 Msa0456100:CDS 15.0%
!!! CTTAATTTTGAAATATTTGA+AGG + chr3_3:49420827-49420846 Msa0456100:intron 15.0%
!!! TTTCTAAGATTTGATAAATT+TGG - chr3_3:49420898-49420917 None:intergenic 15.0%
!! GATCTATTGAAATTTAAAAA+TGG - chr3_3:49421199-49421218 None:intergenic 15.0%
!! TTAACTTAATTATAGAAAAC+CGG + chr3_3:49422528-49422547 Msa0456100:intron 15.0%
!! AAAAAATTACATAATGTATC+AGG - chr3_3:49422634-49422653 None:intergenic 15.0%
!!! ATGATGTAACTTTTTAATTA+TGG + chr3_3:49425527-49425546 Msa0456100:intron 15.0%
!! AGGTATTAAAAATTGTAAAT+TGG - chr3_3:49425583-49425602 None:intergenic 15.0%
!! AATAAAAAAACTCCTAAAAA+GGG - chr3_3:49425668-49425687 None:intergenic 15.0%
!! AAATAAAAAAACTCCTAAAA+AGG - chr3_3:49425669-49425688 None:intergenic 15.0%
!!! ATTTTGCCAATTTTTTTTAA+AGG + chr3_3:49425830-49425849 Msa0456100:intron 15.0%
!! GAAATAAAAATACTACTAAT+AGG - chr3_3:49426508-49426527 None:intergenic 15.0%
!! AAATAAATTGAGGAAAAAAT+TGG - chr3_3:49426765-49426784 None:intergenic 15.0%
!! CAAAGAAAATAAATAAATTG+AGG - chr3_3:49426775-49426794 None:intergenic 15.0%
!!! AAATACCAAATAATTTTACA+AGG + chr3_3:49426938-49426957 Msa0456100:CDS 15.0%
!! ACATATACATTTATTTATGT+TGG + chr3_3:49427760-49427779 Msa0456100:intron 15.0%
!! GTCAATTTAAATTATTATGA+GGG - chr3_3:49428005-49428024 None:intergenic 15.0%
!! TGTCAATTTAAATTATTATG+AGG - chr3_3:49428006-49428025 None:intergenic 15.0%
!!! TTTCTAAGATTTGATAAATA+TGG - chr3_3:49430522-49430541 None:intergenic 15.0%
!! AACAAAAAAAAAGATAATGA+TGG + chr3_3:49430595-49430614 Msa0456100:intron 15.0%
!!! GGTTTTTTTTTTTGAAAAAT+TGG + chr3_3:49431169-49431188 Msa0456100:intron 15.0%
!!! TTGTCTTTTATGTTATATTT+AGG + chr3_3:49431648-49431667 Msa0456100:intron 15.0%
!! ATCGTTAAAAAAAATGATAA+AGG - chr3_3:49431686-49431705 None:intergenic 15.0%
!! AATAAAAAAACTCCTAAAAA+GGG - chr3_3:49425668-49425687 None:intergenic 15.0%
!! AAATAAAAAAACTCCTAAAA+AGG - chr3_3:49425669-49425688 None:intergenic 15.0%
!!! GCTAACATTTTATAATTTAA+AGG + chr3_3:49431805-49431824 Msa0456100:intron 15.0%
!!! ATTTTGCCAATTTTTTTTTT+AGG + chr3_3:49431963-49431982 Msa0456100:intron 15.0%
!! TTAGTTCCTAAAAAAAAAAT+TGG - chr3_3:49431972-49431991 None:intergenic 15.0%
!! GTAACATAATATTAATTGAA+AGG - chr3_3:49432599-49432618 None:intergenic 15.0%
!! ACATTACATATATAGAATAA+GGG - chr3_3:49433000-49433019 None:intergenic 15.0%
!! AACATTACATATATAGAATA+AGG - chr3_3:49433001-49433020 None:intergenic 15.0%
!! GAAATAAAAATACTACTAAT+AGG - chr3_3:49426508-49426527 None:intergenic 15.0%
!! AAATAAATTGAGGAAAAAAT+TGG - chr3_3:49426765-49426784 None:intergenic 15.0%
!! CAAAGAAAATAAATAAATTG+AGG - chr3_3:49426775-49426794 None:intergenic 15.0%
!!! AAATACCAAATAATTTTACA+AGG + chr3_3:49426938-49426957 Msa0456100:CDS 15.0%
!! TATATATATATATTTGTGTG+TGG - chr3_3:49434610-49434629 None:intergenic 15.0%
!! ACAAATATATATATATATGC+AGG + chr3_3:49434613-49434632 Msa0456100:intron 15.0%
!! TAGCACTATAAATTTGATTA+CGG + chr3_3:49419508-49419527 Msa0456100:intron 20.0%
!! TTTAGTCAATATCAAACAAA+AGG - chr3_3:49419600-49419619 None:intergenic 20.0%
!!! TTTGTTTGATATTGACTAAA+AGG + chr3_3:49419600-49419619 Msa0456100:intron 20.0%
!! AAATACCAAATAAGTTTACA+AGG + chr3_3:49419661-49419680 Msa0456100:CDS 20.0%
!!! AAATATTACTCTTTAGAACA+TGG + chr3_3:49419807-49419826 Msa0456100:intron 20.0%
!!! AATATTACTCTTTAGAACAT+GGG + chr3_3:49419808-49419827 Msa0456100:intron 20.0%
!!! AATGTTTTATAGATAAATGC+TGG + chr3_3:49420103-49420122 Msa0456100:intron 20.0%
!! TGTATAAGAATTGTGAAAAA+AGG - chr3_3:49420325-49420344 None:intergenic 20.0%
!! GTACGAAATATACATTTAAA+AGG + chr3_3:49420490-49420509 Msa0456100:CDS 20.0%
!! ACGAAATATACATTTAAAAG+GGG + chr3_3:49420492-49420511 Msa0456100:CDS 20.0%
!!! TTAAAGTTCATGTTTTCTAA+AGG + chr3_3:49420707-49420726 Msa0456100:intron 20.0%
!!! TAAAGTTCATGTTTTCTAAA+GGG + chr3_3:49420708-49420727 Msa0456100:intron 20.0%
!!! CTACTTTTTTTAGATAATGA+TGG + chr3_3:49420938-49420957 Msa0456100:intron 20.0%
!! AATCAAATGAAGTATAGAAA+AGG + chr3_3:49421020-49421039 Msa0456100:intron 20.0%
!!! AGAAAGTTTGTTTAAGATAT+AGG + chr3_3:49421623-49421642 Msa0456100:intron 20.0%
!! AAACAATACTCAAGAAAAAT+AGG - chr3_3:49421723-49421742 None:intergenic 20.0%
!!! TTTCAATTTTTTGAGACATA+TGG + chr3_3:49421740-49421759 Msa0456100:intron 20.0%
!!! TCTTTTACTGTTTAGATATT+GGG + chr3_3:49421806-49421825 Msa0456100:intron 20.0%
!! TTTACATATAAACTCATGTT+CGG + chr3_3:49422571-49422590 Msa0456100:intron 20.0%
!!! GAACAAATTTTAAATTCAAG+CGG + chr3_3:49422842-49422861 Msa0456100:intron 20.0%
!!! AACAAATTTTAAATTCAAGC+GGG + chr3_3:49422843-49422862 Msa0456100:intron 20.0%
!! TTTAAAAATTGGTGTGAAAT+TGG + chr3_3:49422871-49422890 Msa0456100:intron 20.0%
!! ATTACACAGAAAATTGTTTA+AGG + chr3_3:49424634-49424653 Msa0456100:intron 20.0%
!!! ATTTCAAATTAGTTCTTCAT+AGG - chr3_3:49424965-49424984 None:intergenic 20.0%
!! TTAAAAAGTTACATCATCAT+TGG - chr3_3:49425524-49425543 None:intergenic 20.0%
!! TAATATTTGTTCAAGTATAC+AGG - chr3_3:49425554-49425573 None:intergenic 20.0%
!! AGATTTATCTAAGTCATAAA+TGG + chr3_3:49425889-49425908 Msa0456100:intron 20.0%
!!! AGAGTTGATTTAATAAATCA+AGG + chr3_3:49425986-49426005 Msa0456100:intron 20.0%
!! TATCTCCTTGTAAAATTATT+TGG - chr3_3:49426946-49426965 None:intergenic 20.0%
!!! AATAATTTTACAAGGAGATA+TGG + chr3_3:49426946-49426965 Msa0456100:CDS 20.0%
!! GTGTATTGGAAAAAAATAAA+TGG + chr3_3:49427024-49427043 Msa0456100:CDS 20.0%
!! AAAAAATAAATGGTGAGATT+TGG + chr3_3:49427034-49427053 Msa0456100:CDS 20.0%
!!! TTGGTAATGTTCAAATATAA+AGG + chr3_3:49427111-49427130 Msa0456100:CDS 20.0%
!! AATATGAGAATTGTGAAAAA+AGG - chr3_3:49427652-49427671 None:intergenic 20.0%
!! TTACTTCATTTATTCATTCA+TGG + chr3_3:49427717-49427736 Msa0456100:intron 20.0%
!! TACTTCATTTATTCATTCAT+GGG + chr3_3:49427718-49427737 Msa0456100:intron 20.0%
!!! ATAAGTTGTTTTTTGAAAAG+AGG - chr3_3:49429869-49429888 None:intergenic 20.0%
!!! TAAGTTGTTTTTTGAAAAAG+AGG - chr3_3:49429930-49429949 None:intergenic 20.0%
!! TTGAAAAAGAGATTGTAATA+AGG + chr3_3:49429039-49429058 Msa0456100:intron 20.0%
!!! ATAAGCTATTTTTTGAAAAG+AGG + chr3_3:49429388-49429407 Msa0456100:intron 20.0%
!!! ATAAGTTGTTTTTTGAATAG+AGG + chr3_3:49429508-49429527 Msa0456100:intron 20.0%
!!! TAAGTTGTTTTTTGAATAGA+GGG + chr3_3:49429509-49429528 Msa0456100:intron 20.0%
!!! TTTTTATGTTGTTTGTTTGA+GGG + chr3_3:49430330-49430349 Msa0456100:intron 20.0%
!!! CTTGATTTTGAAATATTTGA+AGG + chr3_3:49430444-49430463 Msa0456100:intron 20.0%
!! TTAGAAAGAAAAATGAATAG+TGG + chr3_3:49420911-49420930 Msa0456100:intron 20.0%
!!! TCTTTTTTTTTGTTGAAGAA+TGG - chr3_3:49430589-49430608 None:intergenic 20.0%
!! TACTCAAATGACAATTATAA+TGG - chr3_3:49430622-49430641 None:intergenic 20.0%
!!! AACACTTTCTTCTTTTATAA+AGG - chr3_3:49431714-49431733 None:intergenic 20.0%
!! ATAATTTAAAGGACTAAATC+AGG + chr3_3:49431816-49431835 Msa0456100:intron 20.0%
!!! AGAGTTGATTTAATAAATCA+AGG + chr3_3:49425986-49426005 Msa0456100:intron 20.0%
!!! AAAAGTTGAAGTATTTATTG+AGG + chr3_3:49432350-49432369 Msa0456100:intron 20.0%
!!! AAAGTTGAAGTATTTATTGA+GGG + chr3_3:49432351-49432370 Msa0456100:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr3_3:49432565-49432584 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG - chr3_3:49432663-49432682 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG + chr3_3:49432662-49432681 Msa0456100:intron 20.0%
!!! ATCTATTCTCTTTTATTCTA+TGG + chr3_3:49426082-49426101 Msa0456100:intron 20.0%
!!! TCTATTCTCTTTTATTCTAT+GGG + chr3_3:49426083-49426102 Msa0456100:intron 20.0%
!! CAAAAATAAGTTTCTACATT+TGG - chr3_3:49432860-49432879 None:intergenic 20.0%
!!! AATAAACAAGGGTATAATAA+TGG + chr3_3:49433336-49433355 Msa0456100:intron 20.0%
!! GTGTATTGGAAAAAAATAAA+TGG + chr3_3:49427024-49427043 Msa0456100:CDS 20.0%
!! AAAAAATAAATGGTGAGATT+TGG + chr3_3:49427034-49427053 Msa0456100:CDS 20.0%
!!! TTGGTAATGTTCAAATATAA+AGG + chr3_3:49427111-49427130 Msa0456100:CDS 20.0%
!! AAAACAAGTAATTAAACTCT+TGG - chr3_3:49427502-49427521 None:intergenic 20.0%
!! AATATGAGAATTGTGAAAAA+AGG - chr3_3:49427652-49427671 None:intergenic 20.0%
!! TTACTTCATTTATTCATTCA+TGG + chr3_3:49427717-49427736 Msa0456100:intron 20.0%
!! TACTTCATTTATTCATTCAT+GGG + chr3_3:49427718-49427737 Msa0456100:intron 20.0%
!! GTACCAAATATACATTTAAA+GGG + chr3_3:49434921-49434940 Msa0456100:CDS 20.0%
!! TACCAAATATACATTTAAAG+GGG + chr3_3:49434922-49434941 Msa0456100:CDS 20.0%
! ATGATCTTGAAAAAATGGAT+GGG - chr3_3:49419385-49419404 None:intergenic 25.0%
!!! TGTCATGTTTTATTCTTAGA+AGG + chr3_3:49419557-49419576 Msa0456100:intron 25.0%
! TATCTCCTTGTAAACTTATT+TGG - chr3_3:49419669-49419688 None:intergenic 25.0%
! AATAAGTTTACAAGGAGATA+TGG + chr3_3:49419669-49419688 Msa0456100:CDS 25.0%
! GTTTATTGGAAAAAAGTCAA+TGG + chr3_3:49419747-49419766 Msa0456100:CDS 25.0%
! AAGTATTAGTACATCAAACT+TGG - chr3_3:49419865-49419884 None:intergenic 25.0%
! AAGTTTGATGTACTAATACT+TGG + chr3_3:49419864-49419883 Msa0456100:CDS 25.0%
! TATATTCCAATCATATATGC+AGG + chr3_3:49420214-49420233 Msa0456100:intron 25.0%
! TTCAGATTGAAGAAAAATCA+TGG + chr3_3:49420545-49420564 Msa0456100:CDS 25.0%
! TGTCTTTGAACTGATAAATA+AGG + chr3_3:49420672-49420691 Msa0456100:CDS 25.0%
!! ATTTTTCCTTTCCCTAAAAT+CGG + chr3_3:49420768-49420787 Msa0456100:intron 25.0%
! GAAAAGGACAATAAGATAAA+TGG + chr3_3:49421036-49421055 Msa0456100:intron 25.0%
!! TACATGCTTAGATTTTCTAA+GGG - chr3_3:49421146-49421165 None:intergenic 25.0%
!! CTATTTTGCAACATCAATAA+TGG + chr3_3:49421172-49421191 Msa0456100:intron 25.0%
! AGTTTAGTATCCAATATGTT+TGG + chr3_3:49421282-49421301 Msa0456100:intron 25.0%
! TTGGTTGTAAGAAGAAATTA+AGG + chr3_3:49421301-49421320 Msa0456100:intron 25.0%
! TGGTTGTAAGAAGAAATTAA+GGG + chr3_3:49421302-49421321 Msa0456100:intron 25.0%
! GGTTGATTAAAAGCTTATAA+TGG - chr3_3:49421702-49421721 None:intergenic 25.0%
!! GTCTTTTACTGTTTAGATAT+TGG + chr3_3:49421805-49421824 Msa0456100:intron 25.0%
!! CTTTTACTGTTTAGATATTG+GGG + chr3_3:49421807-49421826 Msa0456100:intron 25.0%
! ATGAGTTCAAATTGAGAAAT+TGG + chr3_3:49422408-49422427 Msa0456100:intron 25.0%
! TGAGTTCAAATTGAGAAATT+GGG + chr3_3:49422409-49422428 Msa0456100:intron 25.0%
! TATATACCATACTAGAAGTT+AGG + chr3_3:49422504-49422523 Msa0456100:intron 25.0%
! TTACATATAAACTCATGTTC+GGG + chr3_3:49422572-49422591 Msa0456100:intron 25.0%
! TGATTTATCATTCATTGTCA+TGG - chr3_3:49422685-49422704 None:intergenic 25.0%
!! ACAAATTTTAAATTCAAGCG+GGG + chr3_3:49422844-49422863 Msa0456100:intron 25.0%
! TGAATTGAAAAAATAGAGTG+TGG + chr3_3:49422944-49422963 Msa0456100:intron 25.0%
! TGAAGAATTATGTGATATTC+TGG - chr3_3:49423981-49424000 None:intergenic 25.0%
! TATCACATAATTCTTCATCT+AGG + chr3_3:49423984-49424003 Msa0456100:intron 25.0%
! CATGATATAACTGTAAAAGT+TGG + chr3_3:49424009-49424028 Msa0456100:intron 25.0%
!!! CTGTGTAATTTTGTTTAGTT+AGG - chr3_3:49424623-49424642 None:intergenic 25.0%
!! AAACAACAAAATTTGAAGCT+TGG - chr3_3:49425473-49425492 None:intergenic 25.0%
!!! AAAGAGTTTTGATGATAACA+AGG - chr3_3:49425603-49425622 None:intergenic 25.0%
! GTTATCATCAAAACTCTTTA+AGG + chr3_3:49425604-49425623 Msa0456100:intron 25.0%
! TAATATAAAAGGACTAGATC+AGG + chr3_3:49425727-49425746 Msa0456100:intron 25.0%
! TGATGACAATAACTATATGT+TGG - chr3_3:49426338-49426357 None:intergenic 25.0%
! GAAGAATAATCTTGAAGAAA+CGG - chr3_3:49426456-49426475 None:intergenic 25.0%
! TTCTTCAATCTAATCTTCAA+AGG + chr3_3:49426470-49426489 Msa0456100:intron 25.0%
! AAGCACTAGAAATTTGATTA+GGG + chr3_3:49426586-49426605 Msa0456100:intron 25.0%
! TAAAGTGTATCCTATACTTA+CGG + chr3_3:49426704-49426723 Msa0456100:intron 25.0%
! AAAAAGATTACCGTAAGTAT+AGG - chr3_3:49426717-49426736 None:intergenic 25.0%
! AATTGGTTATTTGAAAGTCA+TGG - chr3_3:49426748-49426767 None:intergenic 25.0%
! TTTACTCAAAATTACTCTCT+AGG + chr3_3:49427078-49427097 Msa0456100:intron 25.0%
! AAGTTTGATGTACTCATATT+TGG + chr3_3:49427141-49427160 Msa0456100:CDS 25.0%
! ATACCTCTAAATTTCTTATG+TGG - chr3_3:49427321-49427340 None:intergenic 25.0%
!! TAGAGGTATGTAAAAATTAG+AGG + chr3_3:49427332-49427351 Msa0456100:intron 25.0%
! ACCATTGAATGTAATTACTT+TGG + chr3_3:49427417-49427436 Msa0456100:intron 25.0%
! TCCAAAGTAATTACATTCAA+TGG - chr3_3:49427421-49427440 None:intergenic 25.0%
! TGCATATATATATTTGTGTG+TGG - chr3_3:49427530-49427549 None:intergenic 25.0%
! ACACACAAATATATATATGC+AGG + chr3_3:49427529-49427548 Msa0456100:intron 25.0%
! ACTTCATTTATTCATTCATG+GGG + chr3_3:49427719-49427738 Msa0456100:intron 25.0%
!! TTCAAAGTTCATGTTTTCTA+AGG + chr3_3:49427785-49427804 Msa0456100:intron 25.0%
!!! TTTTTAAAACTCGCAAACAA+GGG - chr3_3:49427875-49427894 None:intergenic 25.0%
!!! TTTTTTAAAACTCGCAAACA+AGG - chr3_3:49427876-49427895 None:intergenic 25.0%
!!! TTTGCGAGTTTTAAAAAACA+AGG + chr3_3:49427878-49427897 Msa0456100:intron 25.0%
!!! TTGCGAGTTTTAAAAAACAA+GGG + chr3_3:49427879-49427898 Msa0456100:intron 25.0%
!!! AGTTTTAAAAAACAAGGGAA+AGG + chr3_3:49427884-49427903 Msa0456100:intron 25.0%
! GAAAAGAGATCGTAATATTT+AGG - chr3_3:49428042-49428061 None:intergenic 25.0%
!!! ATAAGCTGATTTTGAAAAAG+AGG - chr3_3:49429148-49429167 None:intergenic 25.0%
!!! ATAAGCTGTTTTTTGAAAAG+AGG - chr3_3:49429268-49429287 None:intergenic 25.0%
!!! TAAGCTGTTTTTTTGAAAAG+AGG - chr3_3:49428579-49428598 None:intergenic 25.0%
!!! CTAAGTTGTTTTTTGAAAAG+AGG - chr3_3:49428700-49428719 None:intergenic 25.0%
!!! AAGCTGTTTTTTTTGAAAAG+AGG - chr3_3:49428806-49428825 None:intergenic 25.0%
!!! ATAAGCTGTTTTTGAAAAAG+TGG + chr3_3:49428847-49428866 Msa0456100:intron 25.0%
!!! ATAAGCTGTTTTTTGAAAAG+AGG + chr3_3:49429268-49429287 Msa0456100:intron 25.0%
! GTTAAAAAACCAATAAGGAA+AGG - chr3_3:49430178-49430197 None:intergenic 25.0%
!!! GTTTTTATGTTGTTTGTTTG+AGG + chr3_3:49430329-49430348 Msa0456100:intron 25.0%
! TTATTTCCTTTCCCTAAAAT+TGG + chr3_3:49430380-49430399 Msa0456100:intron 25.0%
! CTAGTTTCTTTAGATAATGA+TGG + chr3_3:49430562-49430581 Msa0456100:intron 25.0%
!!! GGTTTTTTTTTATCTGAAGA+TGG - chr3_3:49430685-49430704 None:intergenic 25.0%
! ATCAAATTATCATGGATTCT+TGG - chr3_3:49430706-49430725 None:intergenic 25.0%
! TTATGGATTCATAAAGTTGA+GGG - chr3_3:49430892-49430911 None:intergenic 25.0%
! AATTTCTCAATTTGAACTCA+TGG - chr3_3:49422409-49422428 None:intergenic 25.0%
! ATGAGTTCAAATTGAGAAAT+TGG + chr3_3:49422408-49422427 Msa0456100:intron 25.0%
! AACCAAATTGTAAATTCAAG+CGG + chr3_3:49431148-49431167 Msa0456100:intron 25.0%
! TGAATTGAAAAAATAGAGTG+TGG + chr3_3:49422944-49422963 Msa0456100:intron 25.0%
!! AAGAAAATGTTACTTGAAAG+TGG + chr3_3:49431907-49431926 Msa0456100:intron 25.0%
! AGACTTATCTTAGTCATAAA+TGG + chr3_3:49432022-49432041 Msa0456100:intron 25.0%
! TTCATTAATATGTGTGCAAT+TGG - chr3_3:49432232-49432251 None:intergenic 25.0%
! AAACAAACCAATAGTTGATT+AGG + chr3_3:49432653-49432672 Msa0456100:intron 25.0%
!!! AGTATGATTTTTTTTCCAAC+TGG + chr3_3:49432772-49432791 Msa0456100:intron 25.0%
! ATACTACTTCTCTTTCAATA+GGG - chr3_3:49433104-49433123 None:intergenic 25.0%
! AAACGACTAATATTAAGAGA+CGG - chr3_3:49433192-49433211 None:intergenic 25.0%
! CTCTTAATATTAGTCGTTTA+AGG + chr3_3:49433193-49433212 Msa0456100:intron 25.0%
!!! ATTAGTTGTGTTGATTTTGA+TGG + chr3_3:49433241-49433260 Msa0456100:intron 25.0%
! CCACTAACTACAATTAATAA+GGG - chr3_3:49433293-49433312 None:intergenic 25.0%
! TCCACTAACTACAATTAATA+AGG - chr3_3:49433294-49433313 None:intergenic 25.0%
! TGGATGAAATTCAATAAACA+AGG + chr3_3:49433324-49433343 Msa0456100:intron 25.0%
! GGATGAAATTCAATAAACAA+GGG + chr3_3:49433325-49433344 Msa0456100:intron 25.0%
! GAAGAATAATCTTGAAGAAA+CGG - chr3_3:49426456-49426475 None:intergenic 25.0%
! TTCTTCAATCTAATCTTCAA+AGG + chr3_3:49426470-49426489 Msa0456100:intron 25.0%
! AAGCACTAGAAATTTGATTA+GGG + chr3_3:49426586-49426605 Msa0456100:intron 25.0%
! TAAAGTGTATCCTATACTTA+CGG + chr3_3:49426704-49426723 Msa0456100:intron 25.0%
! AAATTGATTACCGTAAGTAT+AGG - chr3_3:49433894-49433913 None:intergenic 25.0%
! AATTGGTTATTTGAAAGTCA+TGG - chr3_3:49426748-49426767 None:intergenic 25.0%
! TGTCTCCTTGTAAAATTATT+TGG - chr3_3:49434025-49434044 None:intergenic 25.0%
!! AATAATTTTACAAGGAGACA+TGG + chr3_3:49434025-49434044 Msa0456100:CDS 25.0%
! TTTACTCAAAATTACTCTCT+AGG + chr3_3:49427078-49427097 Msa0456100:intron 25.0%
! AAGTTTGATGTACTCATATT+TGG + chr3_3:49427141-49427160 Msa0456100:CDS 25.0%
! ATACCTCTAAATTTCTTATG+TGG - chr3_3:49427321-49427340 None:intergenic 25.0%
!! AGAGGTATGTAAAAATTTAG+AGG + chr3_3:49434412-49434431 Msa0456100:intron 25.0%
! ACCATTGAATGTAATTACTT+TGG + chr3_3:49427417-49427436 Msa0456100:intron 25.0%
! TCCAAAGTAATTACATTCAA+TGG - chr3_3:49427421-49427440 None:intergenic 25.0%
! ACTTCATTTATTCATTCATG+GGG + chr3_3:49427719-49427738 Msa0456100:intron 25.0%
! CGTACCAAATATACATTTAA+AGG + chr3_3:49434920-49434939 Msa0456100:CDS 25.0%
! ACCAAATATACATTTAAAGG+GGG + chr3_3:49434923-49434942 Msa0456100:CDS 25.0%
GATGATCTTGAAAAAATGGA+TGG - chr3_3:49419386-49419405 None:intergenic 30.0%
!! ATCAAATCCAGTATTGATCA+AGG + chr3_3:49419701-49419720 Msa0456100:CDS 30.0%
GCACTAAATGGAAAGTTTAT+TGG + chr3_3:49419733-49419752 Msa0456100:CDS 30.0%
AAAAAGTCAATGGTGAGATT+TGG + chr3_3:49419757-49419776 Msa0456100:CDS 30.0%
!! TTGGTGGTGTTTAAATATAG+AGG + chr3_3:49419834-49419853 Msa0456100:CDS 30.0%
AAACTACTCAAAGCTTGAAT+CGG + chr3_3:49420248-49420267 Msa0456100:CDS 30.0%
TCTTATACAACCTAATCATC+TGG + chr3_3:49420336-49420355 Msa0456100:CDS 30.0%
CTTATACAACCTAATCATCT+GGG + chr3_3:49420337-49420356 Msa0456100:CDS 30.0%
ATATTTGAAGGAAGACTCTA+TGG + chr3_3:49420839-49420858 Msa0456100:intron 30.0%
AAGAAATTCGTTAGTCATGA+TGG - chr3_3:49420866-49420885 None:intergenic 30.0%
TGCAACTTATGTAGATTGTA+GGG + chr3_3:49421110-49421129 Msa0456100:intron 30.0%
!! TTAGATTTTCTAAGGGAACT+TGG - chr3_3:49421139-49421158 None:intergenic 30.0%
! CTACATGCTTAGATTTTCTA+AGG - chr3_3:49421147-49421166 None:intergenic 30.0%
CTTCTTACAACCAAACATAT+TGG - chr3_3:49421295-49421314 None:intergenic 30.0%
! AAGAAATTAAGGGTGTGTTT+GGG + chr3_3:49421312-49421331 Msa0456100:intron 30.0%
! TAACCTCGTTATCTCTTTTA+GGG - chr3_3:49421560-49421579 None:intergenic 30.0%
GAGTTAATGAAGTAGATTGT+AGG - chr3_3:49421904-49421923 None:intergenic 30.0%
GAACTTAAAACCATCAAGAA+AGG - chr3_3:49422000-49422019 None:intergenic 30.0%
!!! TTCTTGATGGTTTTAAGTTC+CGG + chr3_3:49422000-49422019 Msa0456100:intron 30.0%
CAAGCACAAATATGAAGTTT+GGG - chr3_3:49422082-49422101 None:intergenic 30.0%
!!! CTTGCTTTTTTATCTGAAGA+TGG - chr3_3:49422126-49422145 None:intergenic 30.0%
ACACATCAGAGATTGTTTAT+TGG + chr3_3:49422193-49422212 Msa0456100:intron 30.0%
TTATGGATTCATAAAGTCGA+GGG - chr3_3:49422271-49422290 None:intergenic 30.0%
ATGAATCTAACTTCCTCTTA+TGG - chr3_3:49422288-49422307 None:intergenic 30.0%
TGAGAAAACTAAACCGTTTA+AGG + chr3_3:49422328-49422347 Msa0456100:intron 30.0%
AACTTCAAATCAGCCTTAAA+CGG - chr3_3:49422344-49422363 None:intergenic 30.0%
CAATTTGAACTCATCAATGA+GGG - chr3_3:49422402-49422421 None:intergenic 30.0%
TCAATTTGAACTCATCAATG+AGG - chr3_3:49422403-49422422 None:intergenic 30.0%
GAGTTCAAATTGAGAAATTG+GGG + chr3_3:49422410-49422429 Msa0456100:intron 30.0%
AGTTCAAATTGAGAAATTGG+GGG + chr3_3:49422411-49422430 Msa0456100:intron 30.0%
! GTATATAAGCTCCTTTTTCT+TGG - chr3_3:49422491-49422510 None:intergenic 30.0%
GTTAAACCTAACTTCTAGTA+TGG - chr3_3:49422513-49422532 None:intergenic 30.0%
CATATCCAGACTTACAAATT+TGG - chr3_3:49422722-49422741 None:intergenic 30.0%
!!! AGCGGGGTTTTTTTAAAAAT+TGG + chr3_3:49422860-49422879 Msa0456100:intron 30.0%
AAAATTGGTGTGAAATTGGA+AGG + chr3_3:49422875-49422894 Msa0456100:intron 30.0%
!! TCGCGTAAAGTTTTATGATT+TGG - chr3_3:49422916-49422935 None:intergenic 30.0%
CAATTAGTAGGGTTATATTG+TGG + chr3_3:49422976-49422995 Msa0456100:intron 30.0%
TCTTCAAAGAGAAAAGTCAA+AGG - chr3_3:49423171-49423190 None:intergenic 30.0%
!! ACTTTTCTCTTTGAAGATCA+GGG + chr3_3:49423174-49423193 Msa0456100:intron 30.0%
! TAAATCTTTAGCTTCCTCAA+TGG + chr3_3:49423535-49423554 Msa0456100:intron 30.0%
GTATGAGTTATTCAAGATGA+AGG - chr3_3:49423705-49423724 None:intergenic 30.0%
!! AAGAAGCATCATATTATCAG+AGG - chr3_3:49423872-49423891 None:intergenic 30.0%
! TTATGTGATATTCTGGAAGA+TGG - chr3_3:49423974-49423993 None:intergenic 30.0%
GGAAAGATTCCAAAATTCAA+TGG - chr3_3:49424064-49424083 None:intergenic 30.0%
GATAGTAAGAAATCTAGTGT+TGG - chr3_3:49424085-49424104 None:intergenic 30.0%
! GTGTTTTTCTCACATTCAAT+TGG - chr3_3:49424238-49424257 None:intergenic 30.0%
AATGTGAGAAAAACACAAGA+AGG + chr3_3:49424242-49424261 Msa0456100:intron 30.0%
ATGTGAGAAAAACACAAGAA+GGG + chr3_3:49424243-49424262 Msa0456100:intron 30.0%
TAATCAGAATCTAAATGCAG+CGG + chr3_3:49424355-49424374 Msa0456100:intron 30.0%
AACACTTGATATACAATCAG+AGG + chr3_3:49424660-49424679 Msa0456100:intron 30.0%
TCTTTCACACCTCTATATAA+AGG - chr3_3:49424856-49424875 None:intergenic 30.0%
AAAACACAACAAAGGATTAG+TGG - chr3_3:49425176-49425195 None:intergenic 30.0%
AATGAGCAAATAAAGAGCAA+AGG - chr3_3:49425496-49425515 None:intergenic 30.0%
AAAAAGGGATAACAATGTGT+TGG - chr3_3:49425653-49425672 None:intergenic 30.0%
! ACACATTGTTATCCCTTTTT+AGG + chr3_3:49425653-49425672 Msa0456100:intron 30.0%
ATAATCTTGAAGAAACGGAT+AGG - chr3_3:49426451-49426470 None:intergenic 30.0%
CAAGCACTAGAAATTTGATT+AGG + chr3_3:49426585-49426604 Msa0456100:intron 30.0%
GATGTTTATGTTGAGAAGTA+TGG - chr3_3:49426808-49426827 None:intergenic 30.0%
! ATAAATGGTGAGATTTGGTT+TGG + chr3_3:49427039-49427058 Msa0456100:CDS 30.0%
!! AAAATTACTCTCTAGGACAT+GGG + chr3_3:49427085-49427104 Msa0456100:intron 30.0%
TTGATGTACTCATATTTGGT+CGG + chr3_3:49427145-49427164 Msa0456100:CDS 30.0%
! CACTTGAGATTTTAGATGAA+TGG + chr3_3:49427247-49427266 Msa0456100:CDS 30.0%
!! ATCAGAAGAGTGCTAAAAAA+AGG + chr3_3:49427274-49427293 Msa0456100:CDS 30.0%
GCATAATCATATTTGAGCTA+AGG - chr3_3:49427383-49427402 None:intergenic 30.0%
AAAGAACTTCATCCTTGAAT+CGG + chr3_3:49427572-49427591 Msa0456100:CDS 30.0%
! TATTCTATTTGACCGATTCA+AGG - chr3_3:49427587-49427606 None:intergenic 30.0%
TCTCATATTGCTTAATCATC+TGG + chr3_3:49427663-49427682 Msa0456100:CDS 30.0%
CTTCATTTATTCATTCATGG+GGG + chr3_3:49427720-49427739 Msa0456100:intron 30.0%
! AAAAAACAAGGGAAAGGTTT+TGG + chr3_3:49427890-49427909 Msa0456100:intron 30.0%
! AAAAACAAGGGAAAGGTTTT+GGG + chr3_3:49427891-49427910 Msa0456100:intron 30.0%
! GAGATTGTAATAAGCTGTTT+TGG - chr3_3:49428261-49428280 None:intergenic 30.0%
!!! AGCTGTTTTTGAAAAAGACA+TGG - chr3_3:49428396-49428415 None:intergenic 30.0%
!!! CTAAGCTGTTTTTTGAAAAG+AGG - chr3_3:49428459-49428478 None:intergenic 30.0%
!! GAGATTGTAATAAGGTGTTT+TGG + chr3_3:49429047-49429066 Msa0456100:intron 30.0%
!!! AGTTGTTTTTGATAAAGACG+TGG + chr3_3:49429451-49429470 Msa0456100:intron 30.0%
! GAGATCGTAATAAGTTGTTT+TGG + chr3_3:49429888-49429907 Msa0456100:intron 30.0%
AAACCAATAAGGAAAGGAAA+TGG - chr3_3:49430172-49430191 None:intergenic 30.0%
TGGGAGTTAAAAAACCAATA+AGG - chr3_3:49430183-49430202 None:intergenic 30.0%
!!! GTTTTTTAACTCCCAAACAA+GGG + chr3_3:49430188-49430207 Msa0456100:intron 30.0%
!!! TTTTTTAACTCCCAAACAAG+GGG + chr3_3:49430189-49430208 Msa0456100:intron 30.0%
! TACTCACTTCACCAATTTTA+GGG - chr3_3:49430394-49430413 None:intergenic 30.0%
! TTACTCACTTCACCAATTTT+AGG - chr3_3:49430395-49430414 None:intergenic 30.0%
AAGAAATTCGTGAGTAATGA+TGG - chr3_3:49430483-49430502 None:intergenic 30.0%
TGTGCAAGATCAAATTATCA+TGG - chr3_3:49430714-49430733 None:intergenic 30.0%
CTTATGGATTCATAAAGTTG+AGG - chr3_3:49430893-49430912 None:intergenic 30.0%
CAACTTTATGAATCCATAAG+AGG + chr3_3:49430893-49430912 Msa0456100:intron 30.0%
ATGAATCTAACTTCCTCTTA+TGG - chr3_3:49422288-49422307 None:intergenic 30.0%
AACCGCTTGAATTTACAATT+TGG - chr3_3:49431153-49431172 None:intergenic 30.0%
TTGAAAAATTGGTGTGAAGT+TGG + chr3_3:49431180-49431199 Msa0456100:intron 30.0%
! TTTTCAATTCACACAACATC+CGG - chr3_3:49431256-49431275 None:intergenic 30.0%
TAGAACACACACAATTAGTA+GGG + chr3_3:49431288-49431307 Msa0456100:intron 30.0%
TCATGACAGAGAATATTTAG+AGG + chr3_3:49431521-49431540 Msa0456100:intron 30.0%
! CAACATTGTTATCCCTTTTT+AGG + chr3_3:49431744-49431763 Msa0456100:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr3_3:49432206-49432225 None:intergenic 30.0%
GTATTTATTGAGGGTAAAGT+TGG + chr3_3:49432360-49432379 Msa0456100:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr3_3:49432206-49432225 None:intergenic 30.0%
AGTCAATTGCTCACAAATTA+AGG - chr3_3:49432724-49432743 None:intergenic 30.0%
!! AAGCGACACTCATTTTAAAA+CGG + chr3_3:49432745-49432764 Msa0456100:intron 30.0%
TAAAAGAGAATAGATCCAGT+TGG - chr3_3:49426077-49426096 None:intergenic 30.0%
CTTCTAAACTTGTGCTTTAA+GGG - chr3_3:49432837-49432856 None:intergenic 30.0%
CATACTACTTCTCTTTCAAT+AGG - chr3_3:49433105-49433124 None:intergenic 30.0%
AGGTTTATGCACGATTATTA+AGG + chr3_3:49433213-49433232 Msa0456100:intron 30.0%
CCCTTATTAATTGTAGTTAG+TGG + chr3_3:49433290-49433309 Msa0456100:intron 30.0%
! AGTTAGTGGAGTATTTAAGT+TGG + chr3_3:49433304-49433323 Msa0456100:intron 30.0%
AAGAGACAATTATTGTGAGA+CGG + chr3_3:49433427-49433446 Msa0456100:intron 30.0%
! GCAAAGCACTTCATTTATTA+AGG - chr3_3:49426306-49426325 None:intergenic 30.0%
! TGATGACGATAACTATATGT+TGG - chr3_3:49433524-49433543 None:intergenic 30.0%
ATAATCTTGAAGAAACGGAT+AGG - chr3_3:49426451-49426470 None:intergenic 30.0%
CAAGCACTAGAAATTTGATT+AGG + chr3_3:49426585-49426604 Msa0456100:intron 30.0%
TGATCTGTTAGAATTAGTAC+TGG + chr3_3:49433787-49433806 Msa0456100:intron 30.0%
! ATAAATGGTGAGATTTGGTT+TGG + chr3_3:49427039-49427058 Msa0456100:CDS 30.0%
!! AAAATTACTCTCTAGGACAT+GGG + chr3_3:49427085-49427104 Msa0456100:intron 30.0%
TTGATGTACTCATATTTGGT+CGG + chr3_3:49427145-49427164 Msa0456100:CDS 30.0%
! CACTTGAGATTTTAGATGAA+TGG + chr3_3:49427247-49427266 Msa0456100:CDS 30.0%
!! ATCAGAAGAGTGCTAAAAAA+AGG + chr3_3:49427274-49427293 Msa0456100:CDS 30.0%
GCATAATCATATTTGAGCTA+AGG - chr3_3:49427383-49427402 None:intergenic 30.0%
AAAGAACTTCATCCTTGAAT+CGG + chr3_3:49427572-49427591 Msa0456100:CDS 30.0%
! TATTCTATTTGACCGATTCA+AGG - chr3_3:49427587-49427606 None:intergenic 30.0%
TCTCATATTACCTAATCATC+TGG + chr3_3:49434747-49434766 Msa0456100:CDS 30.0%
CTTCATTTATTCATTCATGG+GGG + chr3_3:49427720-49427739 Msa0456100:intron 30.0%
ACCCCCTTTAAATGTATATT+TGG - chr3_3:49434927-49434946 None:intergenic 30.0%
CTTGAAAAAATGGATGGGAA+AGG - chr3_3:49419380-49419399 None:intergenic 35.0%
GGAGGATGATCTTGAAAAAA+TGG - chr3_3:49419390-49419409 None:intergenic 35.0%
TCCTCCAATCTAATCTTCAA+AGG + chr3_3:49419404-49419423 Msa0456100:CDS 35.0%
TAAGCATGCATAATGCATTC+TGG + chr3_3:49419431-49419450 Msa0456100:intron 35.0%
! AGATTTGGTTCGAAAAAGGT+TGG + chr3_3:49419772-49419791 Msa0456100:intron 35.0%
!! ATCAGAAGAGTGCTAGAAAA+AGG + chr3_3:49419979-49419998 Msa0456100:CDS 35.0%
TGTGGTCGAGGATAAAATAA+TGG - chr3_3:49420008-49420027 None:intergenic 35.0%
ATACCGCTAACTTTCTTATG+TGG - chr3_3:49420026-49420045 None:intergenic 35.0%
!! TACTTGGGTTGAAAACATGT+AGG + chr3_3:49420080-49420099 Msa0456100:intron 35.0%
ACATCACCTGCATATATGAT+TGG - chr3_3:49420223-49420242 None:intergenic 35.0%
! GTCAAATAAATCTAGAGCTC+AGG + chr3_3:49420270-49420289 Msa0456100:CDS 35.0%
AAAAGGGGTTATTGAGTACA+AGG + chr3_3:49420507-49420526 Msa0456100:CDS 35.0%
TCATATCACGCTTGTAAGAA+GGG - chr3_3:49420585-49420604 None:intergenic 35.0%
TCAAAGACACAAACATCTTC+AGG - chr3_3:49420661-49420680 None:intergenic 35.0%
!!! TACTCACTTCACCGATTTTA+GGG - chr3_3:49420782-49420801 None:intergenic 35.0%
!!! TTACTCACTTCACCGATTTT+AGG - chr3_3:49420783-49420802 None:intergenic 35.0%
! TTGATAGTTTCTTCATCCCA+CGG - chr3_3:49421000-49421019 None:intergenic 35.0%
GTGCAACTTATGTAGATTGT+AGG + chr3_3:49421109-49421128 Msa0456100:intron 35.0%
GATACTAAACTGCATTTCTG+CGG - chr3_3:49421273-49421292 None:intergenic 35.0%
! GAAGAAATTAAGGGTGTGTT+TGG + chr3_3:49421311-49421330 Msa0456100:intron 35.0%
!!! ATCTCTTTTAGGGTGTGTTT+GGG - chr3_3:49421550-49421569 None:intergenic 35.0%
!!! TATCTCTTTTAGGGTGTGTT+TGG - chr3_3:49421551-49421570 None:intergenic 35.0%
! CTAACCTCGTTATCTCTTTT+AGG - chr3_3:49421561-49421580 None:intergenic 35.0%
TATGGTGATCAATCTCCTTT+AGG + chr3_3:49421758-49421777 Msa0456100:intron 35.0%
CATTTGAGTACCTTTCTTGA+TGG + chr3_3:49421987-49422006 Msa0456100:intron 35.0%
GCAAGCACAAATATGAAGTT+TGG - chr3_3:49422083-49422102 None:intergenic 35.0%
CATCAGAGATTGTTTATTGG+AGG + chr3_3:49422196-49422215 Msa0456100:intron 35.0%
TGTTTATTGGAGGAATGCTA+AGG + chr3_3:49422206-49422225 Msa0456100:intron 35.0%
TCATCGCTAATAAGCTTCAT+AGG - chr3_3:49422243-49422262 None:intergenic 35.0%
CTTATGGATTCATAAAGTCG+AGG - chr3_3:49422272-49422291 None:intergenic 35.0%
CGACTTTATGAATCCATAAG+AGG + chr3_3:49422272-49422291 Msa0456100:intron 35.0%
!! GTTTAAGGCTGATTTGAAGT+TGG + chr3_3:49422343-49422362 Msa0456100:intron 35.0%
GAAAGTGAAGAGATGTGAAT+TGG + chr3_3:49422433-49422452 Msa0456100:intron 35.0%
AAAACACATCGCCAAGAAAA+AGG + chr3_3:49422477-49422496 Msa0456100:intron 35.0%
CTCATCCAAATTTGTAAGTC+TGG + chr3_3:49422714-49422733 Msa0456100:intron 35.0%
TGGTAGAACACACAATTAGT+AGG + chr3_3:49422964-49422983 Msa0456100:intron 35.0%
GGTAGAACACACAATTAGTA+GGG + chr3_3:49422965-49422984 Msa0456100:intron 35.0%
TGAATCAGGATCTGATAAAG+AGG - chr3_3:49423060-49423079 None:intergenic 35.0%
GCAGATTAAGCAGAGTTTAA+TGG - chr3_3:49423105-49423124 None:intergenic 35.0%
! ATCTGCTTCTTGAATTTGCT+TGG + chr3_3:49423119-49423138 Msa0456100:intron 35.0%
!! GACTTTTCTCTTTGAAGATC+AGG + chr3_3:49423173-49423192 Msa0456100:intron 35.0%
TCAAGGAAAGAAGATCAGAA+GGG - chr3_3:49423242-49423261 None:intergenic 35.0%
GAGAAACTTTCTGTTCTTCT+TGG + chr3_3:49423286-49423305 Msa0456100:intron 35.0%
GAAGGATGATGAAACTATTG+AGG - chr3_3:49423687-49423706 None:intergenic 35.0%
ATCTTCATGTACTCTGCTTT+GGG + chr3_3:49423827-49423846 Msa0456100:intron 35.0%
GATTTAGTCCTTGATGAAGA+AGG - chr3_3:49423944-49423963 None:intergenic 35.0%
! ATGCTGAAGAATTTTCTTGG+TGG - chr3_3:49424039-49424058 None:intergenic 35.0%
! GAGATGCTGAAGAATTTTCT+TGG - chr3_3:49424042-49424061 None:intergenic 35.0%
! TCAGCATCTCCATTGAATTT+TGG + chr3_3:49424052-49424071 Msa0456100:intron 35.0%
AAGTGTTTCACAACAGATCA+AGG + chr3_3:49424203-49424222 Msa0456100:intron 35.0%
TGTGAGAAAAACACAAGAAG+GGG + chr3_3:49424244-49424263 Msa0456100:intron 35.0%
! GATCAGTGTGTTCAGTTTTT+AGG - chr3_3:49424305-49424324 None:intergenic 35.0%
ACGACACAAAGCAATTATAC+TGG + chr3_3:49424403-49424422 Msa0456100:intron 35.0%
TACTCTTAGTGAAATCTCCT+TGG - chr3_3:49424471-49424490 None:intergenic 35.0%
TTGATTGTGTTCTTGAGCAA+AGG - chr3_3:49424565-49424584 None:intergenic 35.0%
CAAATCAGATACAGACTCAA+TGG + chr3_3:49424694-49424713 Msa0456100:intron 35.0%
TTCAGCATTACCAAATCTCT+AGG + chr3_3:49424822-49424841 Msa0456100:intron 35.0%
GTCTTCACTCCTTTATATAG+AGG + chr3_3:49424844-49424863 Msa0456100:intron 35.0%
CAAATCAGGCAAAAGATCAA+AGG - chr3_3:49424934-49424953 None:intergenic 35.0%
! CTTTGATCTTTTGCCTGATT+TGG + chr3_3:49424932-49424951 Msa0456100:intron 35.0%
GAAATCCATTCCTTATCCAA+AGG + chr3_3:49424980-49424999 Msa0456100:intron 35.0%
ATGTTCCTTTGGATAAGGAA+TGG - chr3_3:49424988-49425007 None:intergenic 35.0%
CTTAGATGTTCCTTTGGATA+AGG - chr3_3:49424993-49425012 None:intergenic 35.0%
AAGAAAACAGCTCCAGAATA+CGG - chr3_3:49425025-49425044 None:intergenic 35.0%
! TGTTTTCTTGTCTTGTAGTG+TGG + chr3_3:49425036-49425055 Msa0456100:intron 35.0%
!! GGATTAGTGGAATTTTGCAA+CGG - chr3_3:49425163-49425182 None:intergenic 35.0%
TGGATTCGAAAACACAACAA+AGG - chr3_3:49425184-49425203 None:intergenic 35.0%
TCACTGCAAAAGTTGTCTAT+TGG - chr3_3:49425204-49425223 None:intergenic 35.0%
ATATTCAGCTTCTGGTGAAA+TGG + chr3_3:49425261-49425280 Msa0456100:intron 35.0%
CACATACTTCTCTTTCCATA+GGG - chr3_3:49426196-49426215 None:intergenic 35.0%
! GAAAGAGAAGTATGTGCTTT+GGG + chr3_3:49426200-49426219 Msa0456100:intron 35.0%
ATGTTATATTCGAGACATGC+AGG + chr3_3:49426266-49426285 Msa0456100:intron 35.0%
TGATCTGTTAGAATTAGCAC+TGG + chr3_3:49426610-49426629 Msa0456100:intron 35.0%
TTTACAAGGAGATATGGAGT+TGG + chr3_3:49426952-49426971 Msa0456100:CDS 35.0%
! ATCAAATCCGGTGTTAATCA+AGG + chr3_3:49426978-49426997 Msa0456100:CDS 35.0%
! GCACTAAATGGAAAGTGTAT+TGG + chr3_3:49427010-49427029 Msa0456100:CDS 35.0%
!! CAAAATTACTCTCTAGGACA+TGG + chr3_3:49427084-49427103 Msa0456100:intron 35.0%
GATGATGAGAATGACAATGT+TGG + chr3_3:49427207-49427226 Msa0456100:CDS 35.0%
CTAAATTTCTTATGTGGTCG+AGG - chr3_3:49427315-49427334 None:intergenic 35.0%
CGACCACATAAGAAATTTAG+AGG + chr3_3:49427315-49427334 Msa0456100:CDS 35.0%
CATATTTGAGCTAAGGTTAG+TGG - chr3_3:49427376-49427395 None:intergenic 35.0%
! ATTCAATGGTGTTCTAAGCA+CGG - chr3_3:49427407-49427426 None:intergenic 35.0%
TGTGAAAAAAGGATTGCTTG+AGG - chr3_3:49420314-49420333 None:intergenic 35.0%
TTAATCATCTGGTAGCAAGT+CGG + chr3_3:49427674-49427693 Msa0456100:CDS 35.0%
TAATGTTGTCTTTGACCTAC+CGG - chr3_3:49427700-49427719 None:intergenic 35.0%
! AAAACAAGGGAAAGGTTTTG+GGG + chr3_3:49427892-49427911 Msa0456100:intron 35.0%
! GAGGTCATATTAAGCTGTTT+TGG - chr3_3:49428440-49428459 None:intergenic 35.0%
!!! AGCTGTTTTTGAAAAAGACG+TGG - chr3_3:49428516-49428535 None:intergenic 35.0%
!!! AGCTGTTTTTGAAAAAGACG+TGG - chr3_3:49428516-49428535 None:intergenic 35.0%
! GAGGTTGTAATAAGCTGTTT+TGG - chr3_3:49429407-49429426 None:intergenic 35.0%
!! AGCTGATTTTGAAAAAGACG+TGG + chr3_3:49429151-49429170 Msa0456100:intron 35.0%
!! GAGGTTCTAATAAGCTGTTT+TGG + chr3_3:49429287-49429306 Msa0456100:intron 35.0%
!!! AGCTGTTTTTGATAAAGACG+TGG + chr3_3:49429331-49429350 Msa0456100:intron 35.0%
! GAGGTTGTAATAAGCTGTTT+TGG + chr3_3:49429407-49429426 Msa0456100:intron 35.0%
!! GAGGGTGTAATAAGTTGTTT+TGG + chr3_3:49429527-49429546 Msa0456100:intron 35.0%
! GAGATCGTAATAAGCTGTTT+TGG + chr3_3:49429227-49429246 Msa0456100:intron 35.0%
CAATAAGGAAAGGAAATGGA+GGG - chr3_3:49430168-49430187 None:intergenic 35.0%
!!! GGTTTTTTAACTCCCAAACA+AGG + chr3_3:49430187-49430206 Msa0456100:intron 35.0%
TACATCAACTCTGTTCCTTT+AGG - chr3_3:49430306-49430325 None:intergenic 35.0%
! TATGTTGTTTGTTTGAGGGA+TGG + chr3_3:49430334-49430353 Msa0456100:intron 35.0%
!! ACTTCACCAATTTTAGGGAA+AGG - chr3_3:49430389-49430408 None:intergenic 35.0%
! AGTAACACTAGCTTCAACTT+TGG + chr3_3:49430410-49430429 Msa0456100:intron 35.0%
CATCTACGCTCAATCATAAA+AGG - chr3_3:49430645-49430664 None:intergenic 35.0%
AATCCAACACTCATACTCAT+CGG + chr3_3:49430733-49430752 Msa0456100:intron 35.0%
AATCCAACACTCATACTCAT+CGG + chr3_3:49430733-49430752 Msa0456100:intron 35.0%
TCCAAAATTTGCATCAGAAG+CGG - chr3_3:49430818-49430837 None:intergenic 35.0%
!! CAAATTTTGGAGGATTGCTA+GGG + chr3_3:49430827-49430846 Msa0456100:intron 35.0%
TCATCGCTAATAAGCTTCAT+AGG - chr3_3:49422243-49422262 None:intergenic 35.0%
TGGGAAAACTAAATCAGTTG+AGG + chr3_3:49430949-49430968 Msa0456100:intron 35.0%
CAATTTGAACTCATGGATGA+GGG - chr3_3:49431023-49431042 None:intergenic 35.0%
TCAATTTGAACTCATGGATG+AGG - chr3_3:49431024-49431043 None:intergenic 35.0%
TGAAGAGATGTGAATTAGAC+TGG + chr3_3:49431058-49431077 Msa0456100:intron 35.0%
AAAATTGGTGTGAAGTTGGA+AGG + chr3_3:49431184-49431203 Msa0456100:intron 35.0%
GTAGAACACACACAATTAGT+AGG + chr3_3:49431287-49431306 Msa0456100:intron 35.0%
!! ATGCGACACTCATTTTGAAA+CGG + chr3_3:49432452-49432471 Msa0456100:intron 35.0%
!!! GACACTCATTTTAAAACGGA+GGG + chr3_3:49432749-49432768 Msa0456100:intron 35.0%
GCTTCTAAACTTGTGCTTTA+AGG - chr3_3:49432838-49432857 None:intergenic 35.0%
AGATTGTGCATTCAATGTCT+TGG + chr3_3:49432881-49432900 Msa0456100:intron 35.0%
AAGAGAAGTAGTATGTGCTT+TGG + chr3_3:49433110-49433129 Msa0456100:intron 35.0%
AGAGAAGTAGTATGTGCTTT+GGG + chr3_3:49433111-49433130 Msa0456100:intron 35.0%
GACTAATATTAAGAGACGGA+GGG - chr3_3:49433188-49433207 None:intergenic 35.0%
! ATCAAATCCGGTGTTAATCA+AGG + chr3_3:49426978-49426997 Msa0456100:CDS 35.0%
! GCACTAAATGGAAAGTGTAT+TGG + chr3_3:49427010-49427029 Msa0456100:CDS 35.0%
!! CAAAATTACTCTCTAGGACA+TGG + chr3_3:49427084-49427103 Msa0456100:intron 35.0%
GATGATGAGAATGACAATGT+TGG + chr3_3:49427207-49427226 Msa0456100:CDS 35.0%
CTAAATTTCTTATGTGGTCG+AGG - chr3_3:49427315-49427334 None:intergenic 35.0%
CGACCACATAAGAAATTTAG+AGG + chr3_3:49427315-49427334 Msa0456100:CDS 35.0%
CATATTTGAGCTAAGGTTAG+TGG - chr3_3:49427376-49427395 None:intergenic 35.0%
! ATTCAATGGTGTTCTAAGCA+CGG - chr3_3:49427407-49427426 None:intergenic 35.0%
TGTGAAAAAAGGATTGCTTG+AGG - chr3_3:49420314-49420333 None:intergenic 35.0%
TAATGTTGTCTTTGACCTAC+CGG - chr3_3:49427700-49427719 None:intergenic 35.0%
TGAGAACAAGGAGAAGAATT+TGG + chr3_3:49434950-49434969 Msa0456100:CDS 35.0%
!! AAGAATTTGGTGCTTCAGAT+TGG + chr3_3:49434963-49434982 Msa0456100:CDS 35.0%
TTCAGATTGGAGAAAGATCA+TGG + chr3_3:49434976-49434995 Msa0456100:CDS 35.0%
! GCCTTTGAAGATTAGATTGG+AGG - chr3_3:49419408-49419427 None:intergenic 40.0%
! CCAGCCTTTGAAGATTAGAT+TGG - chr3_3:49419411-49419430 None:intergenic 40.0%
CCAATCTAATCTTCAAAGGC+TGG + chr3_3:49419408-49419427 Msa0456100:CDS 40.0%
ACTTTCCATTTAGTGCCATC+AGG - chr3_3:49419729-49419748 None:intergenic 40.0%
! GGTGAGATTTGGTTCGAAAA+AGG + chr3_3:49419768-49419787 Msa0456100:CDS 40.0%
!! CTCTTTAGAACATGGGTGTT+TGG + chr3_3:49419815-49419834 Msa0456100:intron 40.0%
! TTTAGAACATGGGTGTTTGG+TGG + chr3_3:49419818-49419837 Msa0456100:intron 40.0%
CTAACTTTCTTATGTGGTCG+AGG - chr3_3:49420020-49420039 None:intergenic 40.0%
CGACCACATAAGAAAGTTAG+CGG + chr3_3:49420020-49420039 Msa0456100:CDS 40.0%
! TAAATCTAGAGCTCAGGAAG+TGG + chr3_3:49420276-49420295 Msa0456100:CDS 40.0%
AATGTTGTGTTTGACCCTAC+CGG - chr3_3:49420373-49420392 None:intergenic 40.0%
TGAGTACAAGGAGAAGAATC+TGG + chr3_3:49420519-49420538 Msa0456100:CDS 40.0%
CTCATATCACGCTTGTAAGA+AGG - chr3_3:49420586-49420605 None:intergenic 40.0%
! TCCTTGTTTGCAAGTGAAAG+TGG + chr3_3:49420628-49420647 Msa0456100:CDS 40.0%
ACCACTTTCACTTGCAAACA+AGG - chr3_3:49420632-49420651 None:intergenic 40.0%
!!! ACTTCACCGATTTTAGGGAA+AGG - chr3_3:49420777-49420796 None:intergenic 40.0%
ATGTGACCTTTATATAGCCG+TGG + chr3_3:49420980-49420999 Msa0456100:intron 40.0%
TGTGACCTTTATATAGCCGT+GGG + chr3_3:49420981-49421000 Msa0456100:intron 40.0%
TTCATCCCACGGCTATATAA+AGG - chr3_3:49420989-49421008 None:intergenic 40.0%
TAAACTGCATTTCTGCGGTA+GGG - chr3_3:49421268-49421287 None:intergenic 40.0%
ACACCCTAAAAGAGATAACG+AGG + chr3_3:49421554-49421573 Msa0456100:intron 40.0%
AAAAGACAACAATCCCTCCT+CGG - chr3_3:49421792-49421811 None:intergenic 40.0%
TTAGAAGAAATGACTGCACG+AGG + chr3_3:49421841-49421860 Msa0456100:intron 40.0%
TAGAAGAAATGACTGCACGA+GGG + chr3_3:49421842-49421861 Msa0456100:intron 40.0%
!!! TTTTAAGTTCCGGTCGTAGT+TGG + chr3_3:49422010-49422029 Msa0456100:intron 40.0%
TGCTTGCAACTAATTACTCG+TGG + chr3_3:49422096-49422115 Msa0456100:intron 40.0%
ACTGCAAGATGAAATGCTCA+TGG - chr3_3:49422152-49422171 None:intergenic 40.0%
! CATTGTCATGGTTGATGCTT+TGG - chr3_3:49422673-49422692 None:intergenic 40.0%
! TTCCTTTTGTCGCATGCTAA+GGG - chr3_3:49422753-49422772 None:intergenic 40.0%
! TTTCCTTTTGTCGCATGCTA+AGG - chr3_3:49422754-49422773 None:intergenic 40.0%
! AGGTAGTTGTTGGTTATCGT+CGG - chr3_3:49423019-49423038 None:intergenic 40.0%
GAAGATGCAAAGGTAGTTGT+TGG - chr3_3:49423029-49423048 None:intergenic 40.0%
! GATGATTTGGGTAGTGAATC+AGG - chr3_3:49423074-49423093 None:intergenic 40.0%
AGTCAAAGGACAAGTCAAAG+AGG - chr3_3:49423157-49423176 None:intergenic 40.0%
CTCAAGGAAAGAAGATCAGA+AGG - chr3_3:49423243-49423262 None:intergenic 40.0%
ATCTTCTTTCCTTGAGCTTC+TGG + chr3_3:49423247-49423266 Msa0456100:intron 40.0%
CTCAAACAGACTTCAGTATC+TGG - chr3_3:49423312-49423331 None:intergenic 40.0%
GTCATCAAAAGCTCTCAAAG+TGG - chr3_3:49423402-49423421 None:intergenic 40.0%
!! AGCTTTTGATGACTTGCCTT+TGG + chr3_3:49423409-49423428 Msa0456100:intron 40.0%
! TTTGATGACTTGCCTTTGGA+TGG + chr3_3:49423413-49423432 Msa0456100:intron 40.0%
TCAATAGCTCTTCCATCCAA+AGG - chr3_3:49423428-49423447 None:intergenic 40.0%
GGTTTCAAACCTTAGTCTCT+GGG - chr3_3:49423652-49423671 None:intergenic 40.0%
AGGTTTCAAACCTTAGTCTC+TGG - chr3_3:49423653-49423672 None:intergenic 40.0%
CTATTGAGGAGATGTACTCA+AGG - chr3_3:49423673-49423692 None:intergenic 40.0%
ACTCATACTGATGTACAAGC+AGG + chr3_3:49423717-49423736 Msa0456100:intron 40.0%
CAAGAAGGTCAAAGAAGCAA+AGG - chr3_3:49423747-49423766 None:intergenic 40.0%
CTCTCTGTTCAAACTACGAA+GGG - chr3_3:49423772-49423791 None:intergenic 40.0%
TCTCTCTGTTCAAACTACGA+AGG - chr3_3:49423773-49423792 None:intergenic 40.0%
!! AGCAAACATAGCTTTAGCAG+TGG + chr3_3:49423793-49423812 Msa0456100:intron 40.0%
CATCTTCATGTACTCTGCTT+TGG + chr3_3:49423826-49423845 Msa0456100:intron 40.0%
TTGTAGAGTTTCCTCAGTTC+TGG + chr3_3:49423890-49423909 Msa0456100:intron 40.0%
AGAAACATACTCCAGAACTG+AGG - chr3_3:49423904-49423923 None:intergenic 40.0%
! GATATTCTGGAAGATGGTGT+TGG - chr3_3:49423968-49423987 None:intergenic 40.0%
TCAGATCTTTGACTGTTGCA+CGG + chr3_3:49424178-49424197 Msa0456100:intron 40.0%
GTGAGAAAAACACAAGAAGG+GGG + chr3_3:49424245-49424264 Msa0456100:intron 40.0%
TGAGAAAAACACAAGAAGGG+GGG + chr3_3:49424246-49424265 Msa0456100:intron 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG - chr3_3:49424460-49424479 None:intergenic 40.0%
AAGCTTCAACAACGACTCTT+TGG - chr3_3:49424902-49424921 None:intergenic 40.0%
CATAGGACAACAACCAAATC+AGG - chr3_3:49424948-49424967 None:intergenic 40.0%
ATCCAAAGGAACATCTAAGC+AGG + chr3_3:49424994-49425013 Msa0456100:intron 40.0%
!! GTCACTTCAAAGGTGTTTGA+AGG - chr3_3:49425141-49425160 None:intergenic 40.0%
! TTTTGCAACGGTCACTTCAA+AGG - chr3_3:49425151-49425170 None:intergenic 40.0%
! TCCAGTTGATATTCAGCTTC+TGG + chr3_3:49425253-49425272 Msa0456100:intron 40.0%
ACCAGAAGCTGAATATCAAC+TGG - chr3_3:49425257-49425276 None:intergenic 40.0%
GCTTCTGATGATATGACTTC+TGG + chr3_3:49425337-49425356 Msa0456100:intron 40.0%
ATAGTGTTCCTGAAGACAAG+AGG - chr3_3:49425364-49425383 None:intergenic 40.0%
CTTCAGGAACACTATTCTTC+AGG + chr3_3:49425369-49425388 Msa0456100:intron 40.0%
TTCAGAAGCGACTTAACTTC+AGG + chr3_3:49425406-49425425 Msa0456100:intron 40.0%
CTCTCACTGTATCAATGCAT+TGG + chr3_3:49426157-49426176 Msa0456100:intron 40.0%
!!! GGTATTTTAACAGTGCCCTA+TGG + chr3_3:49426178-49426197 Msa0456100:intron 40.0%
GCACATACTTCTCTTTCCAT+AGG - chr3_3:49426197-49426216 None:intergenic 40.0%
! GGAAAGAGAAGTATGTGCTT+TGG + chr3_3:49426199-49426218 Msa0456100:intron 40.0%
TTATATTCGAGACATGCAGG+TGG + chr3_3:49426269-49426288 Msa0456100:intron 40.0%
!! ATGGATGATGGAGTTTGAAG+TGG - chr3_3:49426406-49426425 None:intergenic 40.0%
ACTTCAAACTCCATCATCCA+TGG + chr3_3:49426405-49426424 Msa0456100:intron 40.0%
AAACTCCATCATCCATGGTT+AGG + chr3_3:49426410-49426429 Msa0456100:intron 40.0%
TTTCTCCTAACCATGGATGA+TGG - chr3_3:49426418-49426437 None:intergenic 40.0%
TGTTGCATTTCTCCTAACCA+TGG - chr3_3:49426425-49426444 None:intergenic 40.0%
! TGGAGTTGGTCTATCAAATC+CGG + chr3_3:49426966-49426985 Msa0456100:CDS 40.0%
ACTTTCCATTTAGTGCCATC+AGG - chr3_3:49419729-49419748 None:intergenic 40.0%
!! ATGGTGAGATTTGGTTTGGA+AGG + chr3_3:49427043-49427062 Msa0456100:CDS 40.0%
!! TGGTGAGATTTGGTTTGGAA+GGG + chr3_3:49427044-49427063 Msa0456100:CDS 40.0%
GTTAGTGGTAAGAGCTTACT+TGG - chr3_3:49427361-49427380 None:intergenic 40.0%
! TTCAATGGTGTTCTAAGCAC+GGG - chr3_3:49427406-49427425 None:intergenic 40.0%
TAAGGCTATGTTTGCGAGTT+GGG + chr3_3:49427803-49427822 Msa0456100:intron 40.0%
!! TATGTTTGCGAGTTGGGTTT+TGG + chr3_3:49427809-49427828 Msa0456100:intron 40.0%
!! AAACAAGGGAAAGGTTTTGG+GGG + chr3_3:49427893-49427912 Msa0456100:intron 40.0%
!!! ATTTTAGAGTCCCCCCAAAT+TGG + chr3_3:49427940-49427959 Msa0456100:intron 40.0%
!!! TTTTAGAGTCCCCCCAAATT+GGG + chr3_3:49427941-49427960 Msa0456100:intron 40.0%
! GAGGTCGTAATAAGCTGTTT+TGG - chr3_3:49428200-49428219 None:intergenic 40.0%
! GTGGTCGTAATAAGCTGTTT+TGG + chr3_3:49429107-49429126 Msa0456100:intron 40.0%
CCAATAAGGAAAGGAAATGG+AGG - chr3_3:49430169-49430188 None:intergenic 40.0%
CCTCCATTTCCTTTCCTTAT+TGG + chr3_3:49430166-49430185 Msa0456100:intron 40.0%
!!! CTTTGTTTGCGAGTTTTGAG+GGG - chr3_3:49430283-49430302 None:intergenic 40.0%
!!! GCTTTGTTTGCGAGTTTTGA+GGG - chr3_3:49430284-49430303 None:intergenic 40.0%
AACTCGCAAACAAAGCCTAA+AGG + chr3_3:49430288-49430307 Msa0456100:intron 40.0%
! TCCGCTTCTGATGCAAATTT+TGG + chr3_3:49430814-49430833 Msa0456100:intron 40.0%
! GCTTCTGATGCAAATTTTGG+AGG + chr3_3:49430817-49430836 Msa0456100:intron 40.0%
!! GCAAATTTTGGAGGATTGCT+AGG + chr3_3:49430826-49430845 Msa0456100:intron 40.0%
AGGATTGCTAGGGTTAACAA+CGG + chr3_3:49430837-49430856 Msa0456100:intron 40.0%
!! AGTTGAGGCTGATTTGATGT+TGG + chr3_3:49430964-49430983 Msa0456100:intron 40.0%
GTGAATTAGACTGGAAGAAC+TGG + chr3_3:49431067-49431086 Msa0456100:intron 40.0%
GTGTGAAGTTGGAAGGAAAT+TGG + chr3_3:49431191-49431210 Msa0456100:intron 40.0%
GAAGTTGGAAGGAAATTGGA+AGG + chr3_3:49431195-49431214 Msa0456100:intron 40.0%
CAAATCATAAGACTTTGCGC+CGG + chr3_3:49431234-49431253 Msa0456100:intron 40.0%
!!! GACACTCATTTTGAAACGGA+AGG - chr3_3:49432456-49432475 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr3_3:49432456-49432475 Msa0456100:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr3_3:49432456-49432475 None:intergenic 40.0%
!!! CGACACTCATTTTAAAACGG+AGG + chr3_3:49432748-49432767 Msa0456100:intron 40.0%
!! ATCCTTAACTTGTGCCCTTA+GGG + chr3_3:49432959-49432978 Msa0456100:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - chr3_3:49432976-49432995 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG - chr3_3:49432977-49432996 None:intergenic 40.0%
CTCTCACTGTATCAATGCAT+TGG + chr3_3:49426157-49426176 Msa0456100:intron 40.0%
CGACTAATATTAAGAGACGG+AGG - chr3_3:49433189-49433208 None:intergenic 40.0%
AGACAATTATTGTGAGACGG+AGG + chr3_3:49433430-49433449 Msa0456100:intron 40.0%
GACAATTATTGTGAGACGGA+GGG + chr3_3:49433431-49433450 Msa0456100:intron 40.0%
!! ATGGATGATGGAGTTTGAAG+TGG - chr3_3:49426406-49426425 None:intergenic 40.0%
ACTTCAAACTCCATCATCCA+TGG + chr3_3:49426405-49426424 Msa0456100:intron 40.0%
AAACTCCATCATCCATGGTT+AGG + chr3_3:49426410-49426429 Msa0456100:intron 40.0%
TTTCTCCTAACCATGGATGA+TGG - chr3_3:49426418-49426437 None:intergenic 40.0%
TGTTGCATTTCTCCTAACCA+TGG - chr3_3:49426425-49426444 None:intergenic 40.0%
TTTACAAGGAGACATGGAGT+TGG + chr3_3:49434031-49434050 Msa0456100:CDS 40.0%
! TGGAGTTGGTCTATCAAATC+CGG + chr3_3:49426966-49426985 Msa0456100:CDS 40.0%
ACTTTCCATTTAGTGCCATC+AGG - chr3_3:49419729-49419748 None:intergenic 40.0%
!! ATGGTGAGATTTGGTTTGGA+AGG + chr3_3:49427043-49427062 Msa0456100:CDS 40.0%
!! TGGTGAGATTTGGTTTGGAA+GGG + chr3_3:49427044-49427063 Msa0456100:CDS 40.0%
GTTAGTGGTAAGAGCTTACT+TGG - chr3_3:49427361-49427380 None:intergenic 40.0%
CTAATCATCTGGTAGCAAGT+CGG + chr3_3:49434758-49434777 Msa0456100:CDS 40.0%
AAAGGGGGTTATTGAGAACA+AGG + chr3_3:49434938-49434957 Msa0456100:CDS 40.0%
GATTGGAGAAAGATCATGGA+AGG + chr3_3:49434980-49434999 Msa0456100:CDS 40.0%
CCGTCTCATGATTGTAAGAA+GGG - chr3_3:49435016-49435035 None:intergenic 40.0%
CCCTTCTTACAATCATGAGA+CGG + chr3_3:49435013-49435032 Msa0456100:CDS 40.0%
ATTTACGAACAAGGACCAAC+CGG - chr3_3:49435054-49435073 None:intergenic 40.0%
TCCTTGTTCGTAAATGAGAG+TGG + chr3_3:49435059-49435078 Msa0456100:CDS 40.0%
TCCACTCTCATTTACGAACA+AGG - chr3_3:49435063-49435082 None:intergenic 40.0%
TCAGGAGCCTTGATCAATAC+TGG - chr3_3:49419711-49419730 None:intergenic 45.0%
! GTATTGATCAAGGCTCCTGA+TGG + chr3_3:49419711-49419730 Msa0456100:CDS 45.0%
CTAATCATCTGGGTGCAAGT+CGG + chr3_3:49420347-49420366 Msa0456100:CDS 45.0%
TGATATGAGTCGTCGCCTTT+CGG + chr3_3:49420597-49420616 Msa0456100:CDS 45.0%
AAATCCAGTGTTCCCCCTAA+CGG + chr3_3:49421079-49421098 Msa0456100:intron 45.0%
CTAAACTGCATTTCTGCGGT+AGG - chr3_3:49421269-49421288 None:intergenic 45.0%
! TTAAGGGTGTGTTTGGGAAG+AGG + chr3_3:49421318-49421337 Msa0456100:intron 45.0%
! TAAGGGTGTGTTTGGGAAGA+GGG + chr3_3:49421319-49421338 Msa0456100:intron 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG + chr3_3:49421325-49421344 Msa0456100:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG + chr3_3:49421329-49421348 Msa0456100:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG - chr3_3:49421329-49421348 None:intergenic 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG - chr3_3:49421325-49421344 None:intergenic 45.0%
TTAGGGTGTGTTTGGGAAGA+GGG - chr3_3:49421543-49421562 None:intergenic 45.0%
! TTTAGGGTGTGTTTGGGAAG+AGG - chr3_3:49421544-49421563 None:intergenic 45.0%
!! TCCTTTAGGACAAATGACCG+AGG + chr3_3:49421772-49421791 Msa0456100:intron 45.0%
TCCTCGGTCATTTGTCCTAA+AGG - chr3_3:49421776-49421795 None:intergenic 45.0%
! TTTAGGACAAATGACCGAGG+AGG + chr3_3:49421775-49421794 Msa0456100:intron 45.0%
TTAGGACAAATGACCGAGGA+GGG + chr3_3:49421776-49421795 Msa0456100:intron 45.0%
ACGAGGGTCATCAATCTTAG+CGG + chr3_3:49421858-49421877 Msa0456100:intron 45.0%
!! GGCTGATTTGAAGTTGGTTG+TGG + chr3_3:49422349-49422368 Msa0456100:intron 45.0%
GTGAATTGGACCAGAAGAAC+CGG + chr3_3:49422447-49422466 Msa0456100:intron 45.0%
!! TTTCTCATCACCGGTTCTTC+TGG - chr3_3:49422460-49422479 None:intergenic 45.0%
! GCGATGTGTTTTCTCATCAC+CGG - chr3_3:49422469-49422488 None:intergenic 45.0%
GTAGTCGTCACTATTCAAGC+CGG - chr3_3:49422550-49422569 None:intergenic 45.0%
GGCCATATCTCTTGCAATGT+GGG + chr3_3:49422593-49422612 Msa0456100:intron 45.0%
GCCATATCTCTTGCAATGTG+GGG + chr3_3:49422594-49422613 Msa0456100:intron 45.0%
TTCCCTTAGCATGCGACAAA+AGG + chr3_3:49422748-49422767 Msa0456100:intron 45.0%
! GGTAGTTGTTGGTTATCGTC+GGG - chr3_3:49423018-49423037 None:intergenic 45.0%
GGAAGCTGATGAAGATGCAA+AGG - chr3_3:49423039-49423058 None:intergenic 45.0%
TTCACTACCCAAATCATCCC+AGG + chr3_3:49423076-49423095 Msa0456100:intron 45.0%
ATGGCAACCTGGGATGATTT+GGG - chr3_3:49423086-49423105 None:intergenic 45.0%
AATGGCAACCTGGGATGATT+TGG - chr3_3:49423087-49423106 None:intergenic 45.0%
GCAGAGTTTAATGGCAACCT+GGG - chr3_3:49423096-49423115 None:intergenic 45.0%
AGCAGAGTTTAATGGCAACC+TGG - chr3_3:49423097-49423116 None:intergenic 45.0%
! CATTCAGCAATGAAGTGTCC+AGG + chr3_3:49423197-49423216 Msa0456100:intron 45.0%
TGCTTCAACTGTAAGAAGCC+TGG - chr3_3:49423218-49423237 None:intergenic 45.0%
AGAAAGTTTCTCGCCAGAAG+GGG - chr3_3:49423278-49423297 None:intergenic 45.0%
CAGAAAGTTTCTCGCCAGAA+GGG - chr3_3:49423279-49423298 None:intergenic 45.0%
ACAGAAAGTTTCTCGCCAGA+AGG - chr3_3:49423280-49423299 None:intergenic 45.0%
CTGAAGTCTGTTTGAGAGCA+TGG + chr3_3:49423316-49423335 Msa0456100:intron 45.0%
! TCTAAAGCTTACCTGCCAGA+TGG - chr3_3:49423577-49423596 None:intergenic 45.0%
AATCTGTAGCCCAGAGACTA+AGG + chr3_3:49423640-49423659 Msa0456100:intron 45.0%
AAACTACGAAGGGAGCAAGA+AGG - chr3_3:49423762-49423781 None:intergenic 45.0%
! CATGTACTCTGCTTTGGGTA+TGG + chr3_3:49423832-49423851 Msa0456100:intron 45.0%
TTTGGGTATGGCAGTGACAA+GGG + chr3_3:49423844-49423863 Msa0456100:intron 45.0%
CTAGTAGCATCAGAACCAGT+AGG + chr3_3:49424133-49424152 Msa0456100:intron 45.0%
GAGAAAAACACAAGAAGGGG+GGG + chr3_3:49424247-49424266 Msa0456100:intron 45.0%
!! TACTGGTTCCTTCCACAATC+CGG + chr3_3:49424420-49424439 Msa0456100:intron 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG - chr3_3:49424459-49424478 None:intergenic 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG - chr3_3:49424461-49424480 None:intergenic 45.0%
! TAGCTTGTGTGCTTGAGCAA+AGG - chr3_3:49424535-49424554 None:intergenic 45.0%
ATGCAGAGCAATTTCAGCAG+AGG + chr3_3:49424766-49424785 Msa0456100:intron 45.0%
GAGCAATTTCAGCAGAGGTT+TGG + chr3_3:49424771-49424790 Msa0456100:intron 45.0%
GGAGTGAAGACCTAGAGATT+TGG - chr3_3:49424835-49424854 None:intergenic 45.0%
ACAACGACTCTTTGGTATGC+TGG - chr3_3:49424894-49424913 None:intergenic 45.0%
GTGGACACAAAACAGAGTAG+TGG + chr3_3:49425055-49425074 Msa0456100:intron 45.0%
! AAACAGAGTAGTGGAGAACG+TGG + chr3_3:49425064-49425083 Msa0456100:intron 45.0%
TGGTGAAATGGCTTCTGATG+AGG + chr3_3:49425273-49425292 Msa0456100:intron 45.0%
TTCAGTAGCAAGTTGCCTTC+AGG + chr3_3:49425442-49425461 Msa0456100:intron 45.0%
! ATGGAGTTTGAAGTGGAGAG+TGG - chr3_3:49426399-49426418 None:intergenic 45.0%
TCAGGAGCCTTGATTAACAC+CGG - chr3_3:49426988-49427007 None:intergenic 45.0%
GTGTTAATCAAGGCTCCTGA+TGG + chr3_3:49426988-49427007 Msa0456100:CDS 45.0%
!! GGTGAGATTTGGTTTGGAAG+GGG + chr3_3:49427045-49427064 Msa0456100:CDS 45.0%
!! AGATTTGGTTTGGAAGGGGT+TGG + chr3_3:49427049-49427068 Msa0456100:intron 45.0%
! TCAATGGTGTTCTAAGCACG+GGG - chr3_3:49427405-49427424 None:intergenic 45.0%
CTAAGGCTATGTTTGCGAGT+TGG + chr3_3:49427802-49427821 Msa0456100:intron 45.0%
!!! TTTGCGAGTTGGGTTTTGGA+GGG + chr3_3:49427813-49427832 Msa0456100:intron 45.0%
!!! AACAAGGGAAAGGTTTTGGG+GGG + chr3_3:49427894-49427913 Msa0456100:intron 45.0%
!!! AAGGTTTTGGGGGGTTTAGA+AGG + chr3_3:49427903-49427922 Msa0456100:intron 45.0%
!!! AGGTTTTGGGGGGTTTAGAA+GGG + chr3_3:49427904-49427923 Msa0456100:intron 45.0%
! TTTAGAGTCCCCCCAAATTG+GGG + chr3_3:49427942-49427961 Msa0456100:intron 45.0%
TTAACTCCCAAACAAGGGGA+AGG + chr3_3:49430193-49430212 Msa0456100:intron 45.0%
! GGAAAACCTTCCCCTTGTTT+GGG - chr3_3:49430202-49430221 None:intergenic 45.0%
AGGAAAGGAAAGGCTTAGGA+GGG - chr3_3:49430259-49430278 None:intergenic 45.0%
AAGGAAAGGAAAGGCTTAGG+AGG - chr3_3:49430260-49430279 None:intergenic 45.0%
TTTGAGGGGAAGGAAAGGAA+AGG - chr3_3:49430269-49430288 None:intergenic 45.0%
!!! GGCTTTGTTTGCGAGTTTTG+AGG - chr3_3:49430285-49430304 None:intergenic 45.0%
ACTCCGATGAGTATGAGTGT+TGG - chr3_3:49430739-49430758 None:intergenic 45.0%
TCTCCGATGAGTATGAGTGT+TGG - chr3_3:49430777-49430796 None:intergenic 45.0%
! CGGCGCAAAGTCTTATGATT+TGG - chr3_3:49431236-49431255 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr3_3:49432455-49432474 Msa0456100:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr3_3:49432455-49432474 None:intergenic 45.0%
!! GATCCTTAACTTGTGCCCTT+AGG + chr3_3:49432958-49432977 Msa0456100:intron 45.0%
GGAGTATATTCGAGACATGC+AGG + chr3_3:49433452-49433471 Msa0456100:intron 45.0%
! ATGGAGTTTGAAGTGGAGAG+TGG - chr3_3:49426399-49426418 None:intergenic 45.0%
TCAGGAGCCTTGATTAACAC+CGG - chr3_3:49426988-49427007 None:intergenic 45.0%
GTGTTAATCAAGGCTCCTGA+TGG + chr3_3:49426988-49427007 Msa0456100:CDS 45.0%
!! GGTGAGATTTGGTTTGGAAG+GGG + chr3_3:49427045-49427064 Msa0456100:CDS 45.0%
!! AGATTTGGTTTGGAAGGGGT+TGG + chr3_3:49427049-49427068 Msa0456100:intron 45.0%
!! CGACTTGCTACCAGATGATT+AGG - chr3_3:49427676-49427695 None:intergenic 45.0%
GCCGTCTCATGATTGTAAGA+AGG - chr3_3:49435017-49435036 None:intergenic 45.0%
AGGCTCCTGATGGCACTAAA+TGG + chr3_3:49419721-49419740 Msa0456100:CDS 50.0%
CGACTTGCACCCAGATGATT+AGG - chr3_3:49420349-49420368 None:intergenic 50.0%
TTGCACAATGCAGCCGTTAG+GGG - chr3_3:49421095-49421114 None:intergenic 50.0%
GTTGCACAATGCAGCCGTTA+GGG - chr3_3:49421096-49421115 None:intergenic 50.0%
AGTTGCACAATGCAGCCGTT+AGG - chr3_3:49421097-49421116 None:intergenic 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG + chr3_3:49421328-49421347 Msa0456100:intron 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG + chr3_3:49421330-49421349 Msa0456100:intron 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG + chr3_3:49421335-49421354 Msa0456100:intron 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG - chr3_3:49421330-49421349 None:intergenic 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG - chr3_3:49421328-49421347 None:intergenic 50.0%
TAAGTTCCGGTCGTAGTTGG+AGG + chr3_3:49422013-49422032 Msa0456100:intron 50.0%
ACAAGTCCTCCAACTACGAC+CGG - chr3_3:49422022-49422041 None:intergenic 50.0%
GGGCCATATCTCTTGCAATG+TGG + chr3_3:49422592-49422611 Msa0456100:intron 50.0%
GCCCCACATTGCAAGAGATA+TGG - chr3_3:49422598-49422617 None:intergenic 50.0%
TGCAATGTGGGGCATGATAG+AGG + chr3_3:49422605-49422624 Msa0456100:intron 50.0%
TCCTCAATGGCAGTCACCTT+TGG + chr3_3:49423548-49423567 Msa0456100:intron 50.0%
ACCAAAGGTGACTGCCATTG+AGG - chr3_3:49423552-49423571 None:intergenic 50.0%
AGTCACCTTTGGTCTCCATC+TGG + chr3_3:49423559-49423578 Msa0456100:intron 50.0%
CTTTGGGTATGGCAGTGACA+AGG + chr3_3:49423843-49423862 Msa0456100:intron 50.0%
TGATGAAGAAGGAGCTGCTG+TGG - chr3_3:49423933-49423952 None:intergenic 50.0%
CAGCAGCTCCTTCTTCATCA+AGG + chr3_3:49423933-49423952 Msa0456100:intron 50.0%
GTAGCATCAGAACCAGTAGG+AGG + chr3_3:49424136-49424155 Msa0456100:intron 50.0%
ATGTCTACTCCTCCTCCTAC+TGG - chr3_3:49424151-49424170 None:intergenic 50.0%
GACTACTTCCGGATTGTGGA+AGG - chr3_3:49424431-49424450 None:intergenic 50.0%
ACTGGACTACTTCCGGATTG+TGG - chr3_3:49424435-49424454 None:intergenic 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG - chr3_3:49424458-49424477 None:intergenic 50.0%
CGCCTGCTTAGATGTTCCTT+TGG - chr3_3:49424999-49425018 None:intergenic 50.0%
! GAAGGCATGTGCTTGCAACT+TGG - chr3_3:49425123-49425142 None:intergenic 50.0%
CTTCTGGACCTCTTGTCTTC+AGG + chr3_3:49425353-49425372 Msa0456100:intron 50.0%
CAGTGAGAGATGAAGTGCGT+AGG - chr3_3:49426146-49426165 None:intergenic 50.0%
AGGCTCCTGATGGCACTAAA+TGG + chr3_3:49419721-49419740 Msa0456100:CDS 50.0%
!! CTCTCTAGGACATGGGTGTT+TGG + chr3_3:49427092-49427111 Msa0456100:intron 50.0%
!! GTTTGCGAGTTGGGTTTTGG+AGG + chr3_3:49427812-49427831 Msa0456100:intron 50.0%
!!! TTGCGAGTTGGGTTTTGGAG+GGG + chr3_3:49427814-49427833 Msa0456100:intron 50.0%
!!! AGTTGGGTTTTGGAGGGGAA+GGG + chr3_3:49427819-49427838 Msa0456100:intron 50.0%
TTAGAGTCCCCCCAAATTGG+GGG + chr3_3:49427943-49427962 Msa0456100:intron 50.0%
GGGAAAACCTTCCCCTTGTT+TGG - chr3_3:49430203-49430222 None:intergenic 50.0%
GGAAAGGAAAGGCTTAGGAG+GGG - chr3_3:49430258-49430277 None:intergenic 50.0%
GGGAAGGAAAGGAAAGGCTT+AGG - chr3_3:49430263-49430282 None:intergenic 50.0%
!!! CGAGTTTTGAGGGGAAGGAA+AGG - chr3_3:49430274-49430293 None:intergenic 50.0%
!!! GTTTGCGAGTTTTGAGGGGA+AGG - chr3_3:49430279-49430298 None:intergenic 50.0%
!! GGCTGATTTGATGTTGGTCG+TGG + chr3_3:49430970-49430989 Msa0456100:intron 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG - chr3_3:49432964-49432983 None:intergenic 50.0%
CAGTGAGAGATGAAGTGCGT+AGG - chr3_3:49426146-49426165 None:intergenic 50.0%
AGGCTCCTGATGGCACTAAA+TGG + chr3_3:49419721-49419740 Msa0456100:CDS 50.0%
!! CTCTCTAGGACATGGGTGTT+TGG + chr3_3:49427092-49427111 Msa0456100:intron 50.0%
ACAAGGACCAACCAGCCGAA+AGG - chr3_3:49420615-49420634 None:intergenic 55.0%
TGCACAATGCAGCCGTTAGG+GGG - chr3_3:49421094-49421113 None:intergenic 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG + chr3_3:49421334-49421353 Msa0456100:intron 55.0%
AAGAGGGTTTAGGAGGGGAG+GGG - chr3_3:49421527-49421546 None:intergenic 55.0%
GAAGAGGGTTTAGGAGGGGA+GGG - chr3_3:49421334-49421353 None:intergenic 55.0%
GGGGTAACTCCAGAAGCTCA+AGG - chr3_3:49423259-49423278 None:intergenic 55.0%
!! GCTTCTGGAGTTACCCCTTC+TGG + chr3_3:49423262-49423281 Msa0456100:intron 55.0%
ACCTTTGGTCTCCATCTGGC+AGG + chr3_3:49423563-49423582 Msa0456100:intron 55.0%
ACCTGCCAGATGGAGACCAA+AGG - chr3_3:49423567-49423586 None:intergenic 55.0%
GCATCAGAACCAGTAGGAGG+AGG + chr3_3:49424139-49424158 Msa0456100:intron 55.0%
AAGGGGGACTGGACTACTTC+CGG - chr3_3:49424442-49424461 None:intergenic 55.0%
AAGCAGGCGAAGCCGTATTC+TGG + chr3_3:49425010-49425029 Msa0456100:intron 55.0%
TGAAGCTTGGACGCTCCTGA+AGG - chr3_3:49425460-49425479 None:intergenic 55.0%
TCATCTGGTAGCAAGTCGGC+CGG + chr3_3:49427678-49427697 Msa0456100:CDS 55.0%
!!! GAGTTGGGTTTTGGAGGGGA+AGG + chr3_3:49427818-49427837 Msa0456100:intron 55.0%
GGAGGGGAAGGAAAGGCTTA+TGG + chr3_3:49427840-49427859 Msa0456100:intron 55.0%
TAGAGTCCCCCCAAATTGGG+GGG + chr3_3:49427944-49427963 Msa0456100:intron 55.0%
CCAAAACCCCCCAATTTGGG+GGG - chr3_3:49427953-49427972 None:intergenic 55.0%
CCCAAAACCCCCCAATTTGG+GGG - chr3_3:49427954-49427973 None:intergenic 55.0%
! CCCCCAAATTGGGGGGTTTT+GGG + chr3_3:49427951-49427970 Msa0456100:intron 55.0%
CCCCAAAACCCCCCAATTTG+GGG - chr3_3:49427955-49427974 None:intergenic 55.0%
! CCCCAAATTGGGGGGTTTTG+GGG + chr3_3:49427952-49427971 Msa0456100:intron 55.0%
CCCCCAAAACCCCCCAATTT+GGG - chr3_3:49427956-49427975 None:intergenic 55.0%
!! CCCAAATTGGGGGGTTTTGG+GGG + chr3_3:49427953-49427972 Msa0456100:intron 55.0%
!!! CCAAATTGGGGGGTTTTGGG+GGG + chr3_3:49427954-49427973 Msa0456100:intron 55.0%
GAAAGGGAGGGAAGGGAGAA+AGG - chr3_3:49430227-49430246 None:intergenic 55.0%
AGGGAAGGAAAGGGAGGGAA+GGG - chr3_3:49430234-49430253 None:intergenic 55.0%
AAGGGAAGGAAAGGGAGGGA+AGG - chr3_3:49430235-49430254 None:intergenic 55.0%
AGGAGGGGAAGGGAAGGAAA+GGG - chr3_3:49430243-49430262 None:intergenic 55.0%
TAGGAGGGGAAGGGAAGGAA+AGG - chr3_3:49430244-49430263 None:intergenic 55.0%
GGAAAGGCTTAGGAGGGGAA+GGG - chr3_3:49430253-49430272 None:intergenic 55.0%
AGGAAAGGCTTAGGAGGGGA+AGG - chr3_3:49430254-49430273 None:intergenic 55.0%
TCATCTGGTAGCAAGTCGGC+CGG + chr3_3:49427678-49427697 Msa0456100:CDS 55.0%
TCATCTGGGTGCAAGTCGGC+CGG + chr3_3:49420351-49420370 Msa0456100:CDS 60.0%
ATGAGTCGTCGCCTTTCGGC+TGG + chr3_3:49420601-49420620 Msa0456100:CDS 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr3_3:49421338-49421357 Msa0456100:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr3_3:49421339-49421358 Msa0456100:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr3_3:49421340-49421359 Msa0456100:intron 60.0%
GGAAGAGGGTTTAGGAGGGG+AGG - chr3_3:49421333-49421352 None:intergenic 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG - chr3_3:49424453-49424472 None:intergenic 60.0%
CAGTCCCCCTTGCACTTCCA+AGG + chr3_3:49424451-49424470 Msa0456100:intron 60.0%
!!! TGGGTTTTGGAGGGGAAGGG+AGG + chr3_3:49427822-49427841 Msa0456100:intron 60.0%
!!! GGGTTTTGGAGGGGAAGGGA+GGG + chr3_3:49427823-49427842 Msa0456100:intron 60.0%
!!! GGTTTTGGAGGGGAAGGGAG+GGG + chr3_3:49427824-49427843 Msa0456100:intron 60.0%
! CCCCCCAAATTGGGGGGTTT+TGG + chr3_3:49427950-49427969 Msa0456100:intron 60.0%
CCCCCCAAAACCCCCCAATT+TGG - chr3_3:49427957-49427976 None:intergenic 60.0%
GGGAGGGAAGGGAGAAAGGA+GGG - chr3_3:49430223-49430242 None:intergenic 60.0%
AGGGAGGGAAGGGAGAAAGG+AGG - chr3_3:49430224-49430243 None:intergenic 60.0%
GGGGAAGGGAAGGAAAGGGA+GGG - chr3_3:49430239-49430258 None:intergenic 60.0%
AGGGGAAGGGAAGGAAAGGG+AGG - chr3_3:49430240-49430259 None:intergenic 60.0%
AGGCTTAGGAGGGGAAGGGA+AGG - chr3_3:49430249-49430268 None:intergenic 60.0%
ACGGCTCGTCAGCTTTCAGC+CGG + chr3_3:49435032-49435051 Msa0456100:CDS 60.0%
CTCGTCAGCTTTCAGCCGGT+TGG + chr3_3:49435036-49435055 Msa0456100:CDS 60.0%
TGGGTGCAAGTCGGCCGGTA+GGG + chr3_3:49420356-49420375 Msa0456100:intron 65.0%
GTCGTCGCCTTTCGGCTGGT+TGG + chr3_3:49420605-49420624 Msa0456100:CDS 65.0%
GCAGCCGTTAGGGGGAACAC+TGG - chr3_3:49421086-49421105 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr3_3:49421343-49421362 Msa0456100:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr3_3:49421344-49421363 Msa0456100:intron 65.0%
GGGTTTAGGAGGGGAGGGGA+GGG - chr3_3:49421523-49421542 None:intergenic 65.0%
AGGGTTTAGGAGGGGAGGGG+AGG - chr3_3:49421524-49421543 None:intergenic 65.0%
CTGGTAGCAAGTCGGCCGGT+AGG + chr3_3:49427682-49427701 Msa0456100:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG + chr3_3:49427828-49427847 Msa0456100:intron 65.0%
GGGGAAGGGAGGGGAAGGAA+AGG + chr3_3:49427833-49427852 Msa0456100:intron 65.0%
CTGGTAGCAAGTCGGCCGGT+AGG + chr3_3:49427682-49427701 Msa0456100:intron 65.0%
CTGGGTGCAAGTCGGCCGGT+AGG + chr3_3:49420355-49420374 Msa0456100:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 49419358 49435097 49419358 ID=Msa0456100;Name=Msa0456100
chr3_3 mRNA 49419358 49435097 49419358 ID=Msa0456100-mRNA-1;Parent=Msa0456100;Name=Msa0456100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.36|0.08|1|0.63|0.41|12|0|660
chr3_3 exon 49419358 49419429 49419358 ID=Msa0456100-mRNA-1:exon:9358;Parent=Msa0456100-mRNA-1
chr3_3 exon 49419660 49419789 49419660 ID=Msa0456100-mRNA-1:exon:9359;Parent=Msa0456100-mRNA-1
chr3_3 exon 49419823 49420041 49419823 ID=Msa0456100-mRNA-1:exon:9360;Parent=Msa0456100-mRNA-1
chr3_3 exon 49420236 49420372 49420236 ID=Msa0456100-mRNA-1:exon:9361;Parent=Msa0456100-mRNA-1
chr3_3 exon 49420487 49420717 49420487 ID=Msa0456100-mRNA-1:exon:9362;Parent=Msa0456100-mRNA-1
chr3_3 exon 49426937 49427066 49426937 ID=Msa0456100-mRNA-1:exon:9363;Parent=Msa0456100-mRNA-1
chr3_3 exon 49427100 49427336 49427100 ID=Msa0456100-mRNA-1:exon:9364;Parent=Msa0456100-mRNA-1
chr3_3 exon 49427551 49427699 49427551 ID=Msa0456100-mRNA-1:exon:9365;Parent=Msa0456100-mRNA-1
chr3_3 exon 49434016 49434124 49434016 ID=Msa0456100-mRNA-1:exon:9366;Parent=Msa0456100-mRNA-1
chr3_3 exon 49434179 49434415 49434179 ID=Msa0456100-mRNA-1:exon:9367;Parent=Msa0456100-mRNA-1
chr3_3 exon 49434635 49434783 49434635 ID=Msa0456100-mRNA-1:exon:9368;Parent=Msa0456100-mRNA-1
chr3_3 exon 49434918 49435097 49434918 ID=Msa0456100-mRNA-1:exon:9369;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49419358 49419429 49419358 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49419660 49419789 49419660 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49419823 49420041 49419823 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49420236 49420372 49420236 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49420487 49420717 49420487 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49426937 49427066 49426937 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49427100 49427336 49427100 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49427551 49427699 49427551 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49434016 49434124 49434016 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49434179 49434415 49434179 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49434635 49434783 49434635 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
chr3_3 CDS 49434918 49435097 49434918 ID=Msa0456100-mRNA-1:cds;Parent=Msa0456100-mRNA-1
Gene Sequence

>Msa0456100

ATGGCTAGGAGAAATACTACCTTTCCCATCCATTTTTTCAAGATCATCCTCCAATCTAATCTTCAAAGGCTGAAAATACCAAATAAGTTTACAAGGAGATATGGAGATAGTCTATCAAATCCAGTATTGATCAAGGCTCCTGATGGCACTAAATGGAAAGTTTATTGGAAAAAAGTCAATGGTGAGATTTGGTTCGAAAAAGAACATGGGTGTTTGGTGGTGTTTAAATATAGAGGAACTTCCAAGTTTGATGTACTAATACTTGGTCAGAATGCAATAGAAATAGACTATGATGCTGAAATTGACAATGTTGTTCAAAGTGACGATGAATCACATGAGATTTTAGATGAATGCAAAAATCAGAAGAGTGCTAGAAAAAGGTCACCATTATTTTATCCTCGACCACATAAGAAAGTTAGCGGTGATGTTAAGAAAACTACTCAAAGCTTGAATCGGTCAAATAAATCTAGAGCTCAGGAAGTGGCTGCAAAATTCATCTCAAGCAATCCTTTTTTCACAATTCTTATACAACCTAATCATCTGGGTGCAAGTCGGCCGCATGTACGAAATATACATTTAAAAGGGGTTATTGAGTACAAGGAGAAGAATCTGGTGCTTCAGATTGAAGAAAAATCATGGAATGTGAAATTGCTCCCTTCTTACAAGCGTGATATGAGTCGTCGCCTTTCGGCTGGTTGGTCCTTGTTTGCAAGTGAAAGTGGTCTGCAACCTGAAGATGTTTGTGTCTTTGAACTGATAAATAAGGAAGATTTAGTTTTTAAAGTTCATCAAATACCAAATAATTTTACAAGGAGATATGGAGTTGGTCTATCAAATCCGGTGTTAATCAAGGCTCCTGATGGCACTAAATGGAAAGTGTATTGGAAAAAAATAAATGGTGAGATTTGGTTTGGAAGGGGACATGGGTGTTTGGTAATGTTCAAATATAAAGGAACTTCAAAGTTTGATGTACTCATATTTGGTCGGAATGCAGTAGAAATAGACTATAATTCTTCATGTGACACTGATGATGAGAATGACAATGTTGGTCATAGTGACGATGAATCACTTGAGATTTTAGATGAATGGCGAAATCAGAAGAGTGCTAAAAAAAGGTCAACATTATTTTATCCTCGACCACATAAGAAATTTAGAGGTGAGAATAAGAAGAGTACTAAAAGAACTTCATCCTTGAATCGGTCAAATAGAATAAGAAGAGTTGAAGAAGTAGCTGCAAAATTCACCTCAAGCAATCCTTTTTTCACAATTCTCATATTGCTTAATCATCTGGTAGCAAGTCGGCCGCAAATACCAAATAATTTTACAAGGAGACATGGAGTTGGTCTATCAAATCCGGTGTTAATCAAGGCTCCTGATGGCACTAAATGGAAAGTGTATTGGAAAAAAATAAATGGACATGGGTGTTTGGTAATGTTCAAATATAAAGGAACTTCAAAGTTTGATGTACTCATATTTGGTCGGAATGCAGTAGAAATAGACTATAATTCTTCATGTGACACTGATGATGAGAATGACAATGTTGGTCATAGTGACGATGAATCACTTGAGATTTTAGATGAATGGCGAAATCAGAAGAGTGCTAAAAAAAGGTCAACATTATTTTATCCTCGACCACATAAGAAATTTAGAGGTGAGAATAAGAAGAGTACTAAAAGAACTTCATCCTTGAATCGGTCAAATAGAATAAGAAGAGTTGAAGAAGTAGCTGCAAAATTCACCTCAAGCAATCCTTTTTTCACAATTCTCATATTACCTAATCATCTGGTAGCAAGTCGGCCGCGCGTACCAAATATACATTTAAAGGGGGTTATTGAGAACAAGGAGAAGAATTTGGTGCTTCAGATTGGAGAAAGATCATGGAAGGTGAAATTGCTCCCTTCTTACAATCATGAGACGGCTCGTCAGCTTTCAGCCGGTTGGTCCTTGTTCGTAAATGAGAGTGGACTGCAACCTGAAAAT
Protein sequence

>Msa0456100

MARRNTTFPIHFFKIILQSNLQRLKIPNKFTRRYGDSLSNPVLIKAPDGTKWKVYWKKVNGEIWFEKEHGCLVVFKYRGTSKFDVLILGQNAIEIDYDAEIDNVVQSDDESHEILDECKNQKSARKRSPLFYPRPHKKVSGDVKKTTQSLNRSNKSRAQEVAAKFISSNPFFTILIQPNHLGASRPHVRNIHLKGVIEYKEKNLVLQIEEKSWNVKLLPSYKRDMSRRLSAGWSLFASESGLQPEDVCVFELINKEDLVFKVHQIPNNFTRRYGVGLSNPVLIKAPDGTKWKVYWKKINGEIWFGRGHGCLVMFKYKGTSKFDVLIFGRNAVEIDYNSSCDTDDENDNVGHSDDESLEILDEWRNQKSAKKRSTLFYPRPHKKFRGENKKSTKRTSSLNRSNRIRRVEEVAAKFTSSNPFFTILILLNHLVASRPQIPNNFTRRHGVGLSNPVLIKAPDGTKWKVYWKKINGHGCLVMFKYKGTSKFDVLIFGRNAVEIDYNSSCDTDDENDNVGHSDDESLEILDEWRNQKSAKKRSTLFYPRPHKKFRGENKKSTKRTSSLNRSNRIRRVEEVAAKFTSSNPFFTILILPNHLVASRPRVPNIHLKGVIENKEKNLVLQIGERSWKVKLLPSYNHETARQLSAGWSLFVNESGLQPEN