AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0456130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0456130 MtrunA17_Chr3g0103181 70.916 251 62 3 239 483 25 270 1.80e-117 346
Msa0456130 MtrunA17_Chr3g0103181 71.429 245 58 5 1 238 38 277 9.10e-111 329
Msa0456130 MtrunA17_Chr3g0103191 78.509 228 41 4 239 459 25 251 2.31e-116 342
Msa0456130 MtrunA17_Chr3g0103191 78.505 214 39 2 1 207 38 251 4.65e-114 336
Msa0456130 MtrunA17_Chr3g0103201 78.899 218 39 2 28 238 1 218 8.45e-116 339
Msa0456130 MtrunA17_Chr3g0103201 80.660 212 35 2 279 484 1 212 5.09e-115 337
Msa0456130 MtrunA17_Chr3g0103171 66.795 259 77 3 233 484 1 257 2.12e-111 330
Msa0456130 MtrunA17_Chr3g0103171 69.231 247 66 4 1 238 18 263 3.72e-110 327
Msa0456130 MtrunA17_Chr3g0103151 70.803 137 35 1 239 370 25 161 2.30e-60 195
Msa0456130 MtrunA17_Chr3g0103151 78.400 125 19 3 1 118 38 161 1.29e-58 190
Msa0456130 MtrunA17_Chr3g0103161 73.333 120 32 0 119 238 2 121 1.38e-56 184
Msa0456130 MtrunA17_Chr3g0103161 73.684 114 30 0 371 484 2 115 4.31e-51 169
Msa0456130 MtrunA17_Chr1g0163071 34.767 279 136 9 240 479 2 273 2.01e-39 144
Msa0456130 MtrunA17_Chr1g0163071 33.574 277 137 9 1 237 14 283 1.12e-36 137
Msa0456130 MtrunA17_Chr1g0208771 32.867 286 138 8 237 483 10 280 3.74e-34 134
Msa0456130 MtrunA17_Chr1g0208771 32.472 271 140 8 1 237 25 286 1.64e-31 126
Msa0456130 MtrunA17_Chr8g0390841 31.633 294 148 10 225 480 40 318 1.39e-31 127
Msa0456130 MtrunA17_Chr8g0390841 32.491 277 131 10 1 237 67 327 6.04e-27 114
Msa0456130 MtrunA17_Chr7g0233521 32.061 262 148 7 239 481 1 251 1.35e-27 111
Msa0456130 MtrunA17_Chr7g0233521 30.952 252 155 6 1 238 14 260 1.86e-22 97.1
Msa0456130 MtrunA17_Chr7g0233561 30.104 289 163 9 225 481 19 300 3.48e-27 111
Msa0456130 MtrunA17_Chr7g0233561 30.627 271 148 10 1 238 46 309 1.71e-22 98.2
Msa0456130 MtrunA17_Chr3g0131891 31.206 282 171 9 218 480 13 290 1.50e-25 107
Msa0456130 MtrunA17_Chr3g0131891 28.405 257 162 8 1 238 47 300 6.44e-19 87.8
Msa0456130 MtrunA17_Chr7g0233541 29.496 278 149 9 240 481 2 268 1.90e-25 105
Msa0456130 MtrunA17_Chr7g0233541 26.894 264 167 6 1 238 14 277 4.56e-19 87.8
Msa0456130 MtrunA17_Chr3g0077461 25.626 519 253 18 1 482 35 457 6.60e-25 107
Msa0456130 MtrunA17_Chr3g0077461 36.264 91 53 1 232 317 15 105 9.22e-12 67.0
Msa0456130 MtrunA17_Chr7g0233531 30.859 256 157 8 240 481 2 251 6.02e-24 101
Msa0456130 MtrunA17_Chr7g0233531 30.739 257 149 7 1 238 14 260 3.96e-20 90.5
Msa0456130 MtrunA17_Chr1g0163131 31.250 272 138 10 1 237 46 303 1.21e-23 101
Msa0456130 MtrunA17_Chr3g0077411 25.000 536 262 19 1 480 53 504 1.98e-23 103
Msa0456130 MtrunA17_Chr3g0077411 24.031 258 125 7 239 483 40 239 2.69e-12 68.9
Msa0456130 MtrunA17_Chr1g0163181 29.181 281 146 11 239 483 20 283 4.68e-21 95.5
Msa0456130 MtrunA17_Chr1g0163181 28.464 267 151 10 1 237 33 289 1.69e-18 87.8
Msa0456130 MtrunA17_Chr4g0067431 26.962 293 179 10 218 479 9 297 3.00e-20 91.7
Msa0456130 MtrunA17_Chr4g0067431 25.869 259 156 10 1 227 43 297 8.14e-16 78.6
Msa0456130 MtrunA17_Chr1g0163251 27.626 257 168 6 239 483 20 270 8.49e-20 91.3
Msa0456130 MtrunA17_Chr1g0163251 28.571 252 157 7 1 237 33 276 1.40e-18 87.4
Msa0456130 MtrunA17_Chr7g0233571 41.026 117 64 1 240 351 26 142 1.38e-19 87.4
Msa0456130 MtrunA17_Chr7g0233571 28.342 187 96 4 1 158 38 215 2.37e-14 72.4
Msa0456130 MtrunA17_Chr5g0419201 33.775 151 93 2 223 366 15 165 2.15e-19 86.3
Msa0456130 MtrunA17_Chr5g0419201 32.558 129 65 4 1 114 44 165 9.63e-13 67.0
Msa0456130 MtrunA17_Chr5g0429931 28.405 257 146 7 235 483 6 232 1.32e-18 85.1
Msa0456130 MtrunA17_Chr5g0429931 25.306 245 146 7 1 237 23 238 1.10e-12 67.8
Msa0456130 MtrunA17_Chr3g0077451 26.877 253 132 7 239 480 11 221 7.17e-18 82.8
Msa0456130 MtrunA17_Chr3g0077451 26.639 244 135 7 1 237 24 230 8.36e-13 68.2
Msa0456130 MtrunA17_Chr4g0009491 23.543 446 234 14 1 414 25 395 1.01e-17 85.5
Msa0456130 MtrunA17_Chr1g0163201 24.740 384 207 18 1 316 31 400 1.00e-16 82.0
Msa0456130 MtrunA17_Chr1g0163201 25.283 265 171 9 239 483 18 275 2.75e-16 80.9
Msa0456130 MtrunA17_Chr1g0163221 27.465 284 178 8 215 479 2 276 5.82e-16 79.3
Msa0456130 MtrunA17_Chr1g0162441 34.906 106 64 1 226 326 9 114 9.16e-15 76.3
Msa0456130 MtrunA17_Chr4g0033961 28.272 191 109 6 226 403 8 183 2.48e-14 74.7
Msa0456130 MtrunA17_Chr3g0077421 27.434 226 119 5 20 237 4 192 1.13e-13 69.7
Msa0456130 MtrunA17_Chr3g0077441 27.434 226 119 5 20 237 4 192 1.13e-13 69.7
Msa0456130 MtrunA17_Chr1g0163261 23.247 271 189 6 225 483 10 273 1.92e-13 70.9
Msa0456130 MtrunA17_Chr1g0163261 23.506 251 170 5 1 237 37 279 8.29e-13 69.3
Msa0456130 MtrunA17_Chr1g0163241 31.405 121 76 3 222 335 4 124 2.63e-13 67.8
Msa0456130 MtrunA17_Chr1g0154161 22.594 239 174 4 1 228 58 296 4.01e-13 70.5
Msa0456130 MtrunA17_Chr1g0154161 23.282 262 169 7 240 480 46 296 4.46e-12 67.0
Msa0456130 MtrunA17_Chr1g0163161 40.196 102 46 4 1 90 1 99 6.32e-13 65.9
Msa0456130 MtrunA17_Chr1g0163191 34.066 91 56 2 239 326 20 109 8.01e-13 66.2
Msa0456130 MtrunA17_Chr1g0163231 22.472 267 156 8 239 479 24 265 1.14e-12 68.6
Msa0456130 MtrunA17_Chr1g0154131 24.345 267 168 9 1 240 210 469 2.53e-12 68.9
Msa0456130 MtrunA17_Chr1g0154131 26.449 276 156 10 240 482 198 459 3.70e-12 68.2
Msa0456130 MtrunA17_Chr1g0162411 35.849 106 61 2 226 326 9 112 1.38e-11 66.6
Msa0456130 MtrunA17_Chr1g0154111 25.146 171 114 3 136 292 251 421 4.88e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0456130 AT3G18990.1 25.658 304 154 8 1 237 34 332 9.28e-21 94.0
Msa0456130 AT3G18990.1 26.266 316 154 11 239 484 21 327 4.88e-20 91.7
Msa0456130 AT3G18990.2 25.658 304 154 8 1 237 34 332 1.48e-20 93.6
Msa0456130 AT3G18990.2 26.266 316 154 11 239 484 21 327 7.19e-20 91.7
Msa0456130 AT1G49475.1 36.036 111 64 3 233 338 43 151 9.98e-14 70.1
Msa0456130 AT1G49475.1 36.364 110 53 2 1 93 61 170 3.49e-11 62.8
Msa0456130 AT1G49480.3 30.159 126 78 3 117 237 97 217 1.24e-12 67.8
Msa0456130 AT1G49480.1 30.159 126 78 3 117 237 97 217 1.24e-12 67.8
Msa0456130 AT1G49480.2 30.159 126 78 3 117 237 97 217 1.24e-12 67.8
Msa0456130 AT4G01580.1 32.609 138 78 4 225 355 31 160 3.08e-12 65.9
Msa0456130 AT3G18960.2 34.694 98 59 1 225 317 31 128 3.44e-11 62.8
Msa0456130 AT3G18960.1 34.694 98 59 1 225 317 31 128 3.80e-11 63.2

Find 85 sgRNAs with CRISPR-Local

Find 660 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATGAATCAGTTGAGATTT+TGG 0.191329 3_3:+49528228 Msa0456130:CDS
GCACTAAATGGAAAGTTTAT+TGG 0.220986 3_3:+49527999 Msa0456130:CDS
GCACTAAATGGAAAGTTTAT+TGG 0.220986 3_3:+49537196 Msa0456130:CDS
GTATGTTCTACCAGATTAAT+TGG 0.237843 3_3:-49537779 None:intergenic
CAGTCTGTACCAGATTTAAA+AGG 0.258589 3_3:+49537894 Msa0456130:intron
AAAGAACTTCATCAATAAAT+TGG 0.265159 3_3:+49537681 Msa0456130:CDS
AAAGAACTTCATCAATAAAT+TGG 0.266413 3_3:+49528497 Msa0456130:CDS
AGACTCCTGATGGCACTAAA+TGG 0.296213 3_3:+49537184 Msa0456130:CDS
AGACTACAGATGGCACTAAA+TGG 0.314510 3_3:+49527987 Msa0456130:CDS
AAGCTATTTCCACAGCATTC+AGG 0.331470 3_3:-49537350 None:intergenic
TTTACTGAAAATTACTCTCT+TGG 0.354240 3_3:+49537264 Msa0456130:CDS
GAAATTACTTCGTTCTTATG+AGG 0.355622 3_3:+49537977 Msa0456130:CDS
ACTGATAAACAAGAAAGATT+TGG 0.358474 3_3:+49528908 Msa0456130:CDS
TTTACTGAAAATTACTCTCT+TGG 0.363298 3_3:+49528067 Msa0456130:CDS
TCCTGAGCTCTAGCATCCTT+TGG 0.372162 3_3:-49537704 None:intergenic
CGGACTTTCTTATGTGTTTG+AGG 0.377509 3_3:-49537498 None:intergenic
TGGAGAGATTTGGTTTGAAA+AGG 0.378673 3_3:+49528033 Msa0456130:CDS
CTCTCTTGGACATGGCTGCT+TGG 0.402665 3_3:+49528081 Msa0456130:CDS
CTCTCTTGGACATGGCTGCT+TGG 0.402665 3_3:+49537278 Msa0456130:CDS
CGTTCTTATGAGGGCAGAAA+TGG 0.405201 3_3:+49537987 Msa0456130:CDS
GAAATTACTTCGTTGTTATG+AGG 0.407954 3_3:+49528800 Msa0456130:CDS
TGGAGAGATCTGGTTTGAAA+AGG 0.408965 3_3:+49537230 Msa0456130:CDS
GGAGAGATTTGGTTTGAAAA+GGG 0.411021 3_3:+49528034 Msa0456130:CDS
CTACTCATCTGGTAGAAAAT+CGG 0.421938 3_3:+49528596 Msa0456130:CDS
AGTGGAAGTGGACTGAAATC+AGG 0.429019 3_3:+49528867 Msa0456130:CDS
TCTCATCAAGCCAATTAATC+TGG 0.435253 3_3:+49537769 Msa0456130:CDS
ACTTTCCATTTAGTGCCATC+AGG 0.440549 3_3:-49537189 None:intergenic
AGAATGTGGTACTGCAGATT+GGG 0.448452 3_3:+49528760 Msa0456130:CDS
AGTGAAAGTGGACTGAAATC+AGG 0.450670 3_3:+49538044 Msa0456130:CDS
TCTCATAAAGCCTACTCATC+TGG 0.455995 3_3:+49528585 Msa0456130:CDS
AAGAATGTGGTACTGCAGAT+TGG 0.459475 3_3:+49528759 Msa0456130:CDS
AGATTTGGTTTGAAAAGGGT+TGG 0.461112 3_3:+49528038 Msa0456130:CDS
AGAATGTGATGCTGCTGATT+GGG 0.480788 3_3:+49537937 Msa0456130:CDS
AAGAATGTGATGCTGCTGAT+TGG 0.482287 3_3:+49537936 Msa0456130:CDS
CTTATGTGTTTGAGGAGAAA+CGG 0.483996 3_3:-49537490 None:intergenic
AAATACCAAGTAAGTTTACT+AGG 0.486071 3_3:+49537124 Msa0456130:CDS
AGATCTGGTTTGAAAAGGGT+TGG 0.488357 3_3:+49537235 Msa0456130:CDS
GGAGAGATCTGGTTTGAAAA+GGG 0.493320 3_3:+49537231 Msa0456130:CDS
AAATTACTTCGTTGTTATGA+GGG 0.500449 3_3:+49528801 Msa0456130:CDS
TCAATAACCCCATTTAAAAG+TGG 0.503683 3_3:-49528726 None:intergenic
CGACGACATAAGAAAGTTCG+AGG 0.503833 3_3:+49528304 Msa0456130:CDS
AAATGGGGTTATTGAGAACA+AGG 0.504796 3_3:+49528734 Msa0456130:CDS
AAAAGGGATTATTGAGAACA+AGG 0.512795 3_3:+49537911 Msa0456130:CDS
GCCAAAGGATGCTAGAGCTC+AGG 0.513948 3_3:+49537703 Msa0456130:CDS
TCTTGGACATGGCTGCTTGG+TGG 0.517847 3_3:+49528084 Msa0456130:CDS
TCTTGGACATGGCTGCTTGG+TGG 0.517847 3_3:+49537281 Msa0456130:CDS
TTGGTGGTGTTTGAATATAA+AGG 0.518126 3_3:+49528100 Msa0456130:CDS
GCCACAGGATGCTAGAGCTC+AGG 0.519514 3_3:+49528519 Msa0456130:CDS
AATGGTCGTCGCCTTTCCGC+AGG 0.521285 3_3:+49538005 Msa0456130:CDS
AGTCTGTACCAGATTTAAAA+GGG 0.526687 3_3:+49537895 Msa0456130:intron
TCTGTAGTCTTTATCAACAC+TGG 0.531326 3_3:-49527974 None:intergenic
TGTCTCCTAGTAAACTTACT+TGG 0.535374 3_3:-49537129 None:intergenic
TGGTACTGCAGATTGGGAAA+AGG 0.536643 3_3:+49528766 Msa0456130:CDS
GGCTTAATCGGAAGAAGGCT+AGG 0.536744 3_3:+49528257 Msa0456130:CDS
TCAGGAGTCTTTATCAACAC+TGG 0.545485 3_3:-49537171 None:intergenic
TGTCGTCGAGGAGAAACAAA+AGG 0.549605 3_3:-49528289 None:intergenic
AAATTACTTCGTTCTTATGA+GGG 0.551233 3_3:+49537978 Msa0456130:CDS
TCACTGTTTGCAAGTGAAAG+TGG 0.557742 3_3:+49538032 Msa0456130:CDS
TAATCTGGTAGAACATACTC+TGG 0.560062 3_3:+49537784 Msa0456130:CDS
TGCAGATTGGGAAAAGGTCA+TGG 0.561983 3_3:+49528772 Msa0456130:CDS
AAGTATGTATACATCAAACT+TGG 0.563066 3_3:-49528128 None:intergenic
GCCAACCCGCGGAAAAGCGA+CGG 0.564559 3_3:-49528833 None:intergenic
TTCATCAATAAATTGGCCAC+AGG 0.565636 3_3:+49528504 Msa0456130:CDS
GTCGTCGCCTTTCCGCAGGT+TGG 0.568723 3_3:+49538009 Msa0456130:CDS
TGAATGGCTTAATCGGAAGA+AGG 0.573439 3_3:+49537449 Msa0456130:CDS
TGATGCTGCTGATTGGGAAA+AGG 0.583869 3_3:+49537943 Msa0456130:CDS
TGAATGGCTTAATCGGAAGA+AGG 0.588393 3_3:+49528252 Msa0456130:CDS
TTCATCAATAAATTGGCCAA+AGG 0.589930 3_3:+49537688 Msa0456130:CDS
TCCTGAGCTCTAGCATCCTG+TGG 0.590768 3_3:-49528520 None:intergenic
AAATATGTGTACATCAAACA+TGG 0.596383 3_3:-49537325 None:intergenic
TGCTGATTGGGAAAAGGTCG+TGG 0.603516 3_3:+49537949 Msa0456130:CDS
AGTAAGTTTACTAGGAGACA+TGG 0.620165 3_3:+49537132 Msa0456130:CDS
ATCGGAAGAAGGCTAGGCAA+AGG 0.622199 3_3:+49528263 Msa0456130:CDS
TGTGTTTGAGGAGAAACGGA+AGG 0.627724 3_3:-49537486 None:intergenic
ACAGTGACCAACCTGCGGAA+AGG 0.630949 3_3:-49538016 None:intergenic
GAAAATTACTCTCTTGGACA+TGG 0.632483 3_3:+49528073 Msa0456130:CDS
GAAAATTACTCTCTTGGACA+TGG 0.632483 3_3:+49537270 Msa0456130:CDS
GTGTTGATAAAGACTACAGA+TGG 0.638828 3_3:+49527977 Msa0456130:CDS
GTGTTGATAAAGACTCCTGA+TGG 0.643737 3_3:+49537174 Msa0456130:CDS
CATATTTGACCTGAATGCTG+TGG 0.649727 3_3:+49537341 Msa0456130:CDS
CGAACTTTCTTATGTCGTCG+AGG 0.659272 3_3:-49528301 None:intergenic
TCATCTGGTAGAAAATCGGA+TGG 0.661350 3_3:+49528600 Msa0456130:CDS
TGCAAACAGTGACCAACCTG+CGG 0.663761 3_3:-49538021 None:intergenic
TGAGAACAAGGATAAGAATG+TGG 0.664188 3_3:+49528746 Msa0456130:CDS
CAAACACATAAGAAAGTCCG+AGG 0.666813 3_3:+49537501 Msa0456130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATTAACTCT+TGG - chr3_3:49528425-49528444 None:intergenic 10.0%
!! TATATGATAATATCAATTAA+TGG + chr3_3:49530866-49530885 Msa0456130:intron 10.0%
!! AATTAAAATGAGATTAATAA+AGG - chr3_3:49530967-49530986 None:intergenic 10.0%
!! ATTTGCTTATATAATTAAAA+CGG - chr3_3:49532302-49532321 None:intergenic 10.0%
!! TAAGCAAATTAATAAATAAA+TGG + chr3_3:49532313-49532332 Msa0456130:intron 10.0%
!! AAGCAAATTAATAAATAAAT+GGG + chr3_3:49532314-49532333 Msa0456130:intron 10.0%
!! TTAAAGAAAAAATAATACTT+TGG + chr3_3:49535741-49535760 Msa0456130:intron 10.0%
!!! TAGTTTTTTTTTTTTTTTTG+AGG + chr3_3:49536341-49536360 Msa0456130:intron 10.0%
!!! AGTTTTTTTTTTTTTTTTGA+GGG + chr3_3:49536342-49536361 Msa0456130:intron 10.0%
!! GTTTATTGGAAAAAAATTAA+TGG + chr3_3:49528013-49528032 Msa0456130:CDS 15.0%
!!! TTAAGTTTGAAATATTTTGA+AGG + chr3_3:49529041-49529060 Msa0456130:intron 15.0%
!!! CTATCAAATTTTTCAAATAT+TGG + chr3_3:49529099-49529118 Msa0456130:intron 15.0%
!! GCACTAAAAATTATAATTAA+TGG - chr3_3:49529278-49529297 None:intergenic 15.0%
!! AACACTTAAAAAAAAAATAC+TGG - chr3_3:49529433-49529452 None:intergenic 15.0%
!! TTTAGAGAAGAAAAAAAATA+GGG - chr3_3:49529547-49529566 None:intergenic 15.0%
!! AAATTAATAAATAAATGGGT+TGG + chr3_3:49532318-49532337 Msa0456130:intron 15.0%
!! TAATGTTCAATTTACTTTAA+AGG + chr3_3:49532431-49532450 Msa0456130:intron 15.0%
!! AAAAAAAAAGGAAAAAAGAA+AGG + chr3_3:49532594-49532613 Msa0456130:intron 15.0%
!!! AATTATTTAAAGTAAACACT+GGG - chr3_3:49532915-49532934 None:intergenic 15.0%
!!! ATTATTTAAAGTAAACACTA+GGG - chr3_3:49532985-49533004 None:intergenic 15.0%
!!! AATTATTTAAAGTAAACACT+AGG - chr3_3:49532915-49532934 None:intergenic 15.0%
!! TTATTAAAGAAAATAAGTCA+GGG - chr3_3:49533349-49533368 None:intergenic 15.0%
!! ATTATTAAAGAAAATAAGTC+AGG - chr3_3:49533350-49533369 None:intergenic 15.0%
!! TTAACTATTTGCTTATATAT+AGG + chr3_3:49533533-49533552 Msa0456130:intron 15.0%
!! TAACTATTTGCTTATATATA+GGG + chr3_3:49533534-49533553 Msa0456130:intron 15.0%
!! ATAGAATAAGAAATAAAAAG+TGG + chr3_3:49535091-49535110 Msa0456130:intron 15.0%
!! TATACTATCTACAATTAATA+AGG + chr3_3:49535439-49535458 Msa0456130:intron 15.0%
!!! CATTTTGAAACAAATTTTAT+TGG + chr3_3:49535845-49535864 Msa0456130:intron 15.0%
!!! ATAAGTAAAATTGACTTTTT+AGG + chr3_3:49536401-49536420 Msa0456130:intron 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG + chr3_3:49536498-49536517 Msa0456130:intron 15.0%
!! AAAAAATTAATGGAGAGATT+TGG + chr3_3:49528023-49528042 Msa0456130:CDS 20.0%
!!! TTTCTTTTCAGTATACATAA+TGG + chr3_3:49528346-49528365 Msa0456130:intron 20.0%
!!! TTCTTTTCAGTATACATAAT+GGG + chr3_3:49528347-49528366 Msa0456130:intron 20.0%
!! AAAGAACTTCATCAATAAAT+TGG + chr3_3:49528497-49528516 Msa0456130:CDS 20.0%
!! TTTATGAGAATTGTGAAAAA+AGG - chr3_3:49528574-49528593 None:intergenic 20.0%
!!! TTAAAGTTCATGTTTTCTAA+AGG + chr3_3:49528934-49528953 Msa0456130:intron 20.0%
!!! TAAAGTTCATGTTTTCTAAA+GGG + chr3_3:49528935-49528954 Msa0456130:intron 20.0%
!!! TATTTTGAAGGAAATATCTA+TGG + chr3_3:49529053-49529072 Msa0456130:intron 20.0%
!! AGCATTATTAATGTAAATCA+TGG + chr3_3:49529205-49529224 Msa0456130:intron 20.0%
!!! AATCATGGTCAATTTTTTTT+AGG + chr3_3:49529220-49529239 Msa0456130:intron 20.0%
!!! ATCATGGTCAATTTTTTTTA+GGG + chr3_3:49529221-49529240 Msa0456130:intron 20.0%
!!! ATTTTGAACTCTCTTATTTT+GGG - chr3_3:49529398-49529417 None:intergenic 20.0%
!!! TATTTTGAACTCTCTTATTT+TGG - chr3_3:49529399-49529418 None:intergenic 20.0%
!! AAATAAGAGAGTTCAAAATA+AGG + chr3_3:49529399-49529418 Msa0456130:intron 20.0%
!! GTTTAGAGAAGAAAAAAAAT+AGG - chr3_3:49529548-49529567 None:intergenic 20.0%
!!! TTTTAGATGAAATACAGTAT+TGG + chr3_3:49529692-49529711 Msa0456130:intron 20.0%
!!! CATTAAATTGTTGCATTTTA+GGG + chr3_3:49529726-49529745 Msa0456130:intron 20.0%
!!! ATTAAATTGTTGCATTTTAG+GGG + chr3_3:49529727-49529746 Msa0456130:intron 20.0%
!!! TATTTTGATAGATTTGAGTA+GGG - chr3_3:49529805-49529824 None:intergenic 20.0%
!!! TTTTTCGTTAACTTTAATAG+TGG + chr3_3:49530064-49530083 Msa0456130:intron 20.0%
!!! TCTGAAATAAAATAAGAGAA+AGG - chr3_3:49530341-49530360 None:intergenic 20.0%
!!! CAAAGTTTAAATTCTAGAAA+TGG + chr3_3:49530708-49530727 Msa0456130:intron 20.0%
!!! AAATTCTAGAAATGGAATTT+AGG + chr3_3:49530716-49530735 Msa0456130:intron 20.0%
!! AATTCATGTATGTGATAATA+AGG + chr3_3:49530893-49530912 Msa0456130:intron 20.0%
!! AGATGATAATCAATGTTAAA+CGG + chr3_3:49531041-49531060 Msa0456130:intron 20.0%
!!! ATTTTTATATCGTTTTCTCA+TGG - chr3_3:49531086-49531105 None:intergenic 20.0%
!! TTTACACTCAATTATTTCAT+TGG + chr3_3:49531504-49531523 Msa0456130:intron 20.0%
!!! GAAAAAAAAATCACGAATTT+TGG - chr3_3:49531552-49531571 None:intergenic 20.0%
!!! TGAAAATTTTCATTCATCAT+CGG - chr3_3:49531994-49532013 None:intergenic 20.0%
!!! AATTTACTTTAAAGGAAGAA+TGG + chr3_3:49532439-49532458 Msa0456130:intron 20.0%
!! CTGTAATATTTGTTTGTATT+CGG + chr3_3:49532863-49532882 Msa0456130:intron 20.0%
!!! ATTATTTAAAGTAAACACTG+GGG - chr3_3:49532914-49532933 None:intergenic 20.0%
!!! CAATTATTTAAAGTAAACAC+TGG - chr3_3:49532916-49532935 None:intergenic 20.0%
!!! TTATTTAAAGTAAACACTAG+GGG - chr3_3:49532984-49533003 None:intergenic 20.0%
!! AATTATTAAAGCAAATAGTG+AGG - chr3_3:49533143-49533162 None:intergenic 20.0%
!! TAATTTCACATACTATTCTA+TGG + chr3_3:49533201-49533220 Msa0456130:intron 20.0%
!! AGTCACGTATAATTATTAAT+GGG - chr3_3:49533285-49533304 None:intergenic 20.0%
!! AAGTCACGTATAATTATTAA+TGG - chr3_3:49533286-49533305 None:intergenic 20.0%
!! TATTAAAGAAAATAAGTCAG+GGG - chr3_3:49533348-49533367 None:intergenic 20.0%
!!! ATAGTGGAGATAATTATTAA+TGG - chr3_3:49533387-49533406 None:intergenic 20.0%
!! ATAATAGTTAAAATCAGTGA+TGG - chr3_3:49533442-49533461 None:intergenic 20.0%
!!! ATTCATATTTGGTTTTGATA+TGG + chr3_3:49533649-49533668 Msa0456130:intron 20.0%
!!! ATGTTTTGCAAATAACTTAT+CGG - chr3_3:49534471-49534490 None:intergenic 20.0%
!! ATTACATAATATGATTGTTG+AGG + chr3_3:49534619-49534638 Msa0456130:intron 20.0%
!! AATAAGAAATAAAAAGTGGT+GGG + chr3_3:49535095-49535114 Msa0456130:intron 20.0%
!! TGTTGAATTAAATTTACCAT+TGG + chr3_3:49535228-49535247 Msa0456130:intron 20.0%
!! AAGAAACAATAATTATGAGA+CGG - chr3_3:49535308-49535327 None:intergenic 20.0%
!! GGATGAAATTCAATAAATAA+GGG - chr3_3:49535408-49535427 None:intergenic 20.0%
!! TGGATGAAATTCAATAAATA+AGG - chr3_3:49535409-49535428 None:intergenic 20.0%
!! ATATTTATGCACGATTATTA+GGG - chr3_3:49535519-49535538 None:intergenic 20.0%
!! AATATTTATGCACGATTATT+AGG - chr3_3:49535520-49535539 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr3_3:49535708-49535727 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG + chr3_3:49535707-49535726 Msa0456130:intron 20.0%
!! TGTAACATAGTATTAATTGA+AGG + chr3_3:49535770-49535789 Msa0456130:intron 20.0%
!! GTAACATAGTATTAATTGAA+GGG + chr3_3:49535771-49535790 Msa0456130:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr3_3:49535805-49535824 Msa0456130:intron 20.0%
!! AAGCTAAGTTAAAATTTCAT+TGG - chr3_3:49535999-49536018 None:intergenic 20.0%
!!! TCAATGTTGTTAATTTGTAT+TGG - chr3_3:49536058-49536077 None:intergenic 20.0%
!! TCATAAAATCACTAATATGA+TGG - chr3_3:49536108-49536127 None:intergenic 20.0%
!!! TAGTGATTTTATGAAATTAG+AGG + chr3_3:49536114-49536133 Msa0456130:intron 20.0%
!! TACTTATATTTAAAAACGGA+GGG - chr3_3:49536388-49536407 None:intergenic 20.0%
!! TTACTTATATTTAAAAACGG+AGG - chr3_3:49536389-49536408 None:intergenic 20.0%
!! GTTTATTGGAAAAAAATCAA+TGG + chr3_3:49537210-49537229 Msa0456130:CDS 20.0%
!! AAAGAACTTCATCAATAAAT+TGG + chr3_3:49528497-49528516 Msa0456130:CDS 20.0%
! TTTACTGAAAATTACTCTCT+TGG + chr3_3:49528067-49528086 Msa0456130:CDS 25.0%
! AAGTATGTATACATCAAACT+TGG - chr3_3:49528131-49528150 None:intergenic 25.0%
! AAGTTTGATGTATACATACT+TGG + chr3_3:49528130-49528149 Msa0456130:intron 25.0%
! AAATTACTTCGTTGTTATGA+GGG + chr3_3:49528801-49528820 Msa0456130:CDS 25.0%
! ACTGATAAACAAGAAAGATT+TGG + chr3_3:49528908-49528927 Msa0456130:CDS 25.0%
! TAAGTGATAATCTTCACATT+TGG + chr3_3:49529006-49529025 Msa0456130:intron 25.0%
! TTCATTGTGTTCATACATAA+CGG - chr3_3:49529175-49529194 None:intergenic 25.0%
!!! TCATGGTCAATTTTTTTTAG+GGG + chr3_3:49529222-49529241 Msa0456130:intron 25.0%
!!! ATTTTTTTTAGGGGTAATCA+TGG + chr3_3:49529231-49529250 Msa0456130:intron 25.0%
!!! GTTGAACTTTGTTTTTGAAT+AGG + chr3_3:49529352-49529371 Msa0456130:intron 25.0%
!!! TTTTAAGTGTTAGCAATACA+AGG + chr3_3:49529442-49529461 Msa0456130:intron 25.0%
! CTTATTTCATGATTTCTTGT+AGG - chr3_3:49529491-49529510 None:intergenic 25.0%
! ACTAATGAAACCAGTTAAAA+TGG + chr3_3:49529593-49529612 Msa0456130:intron 25.0%
! CTAATGAAACCAGTTAAAAT+GGG + chr3_3:49529594-49529613 Msa0456130:intron 25.0%
!! TTTGATAGATTTGGAACTTT+AGG - chr3_3:49529636-49529655 None:intergenic 25.0%
!!! ACAGTGTATTTTGATAGATT+TGG - chr3_3:49529645-49529664 None:intergenic 25.0%
! CCTAAAATGCAACAATTTAA+TGG - chr3_3:49529728-49529747 None:intergenic 25.0%
!! CCATTAAATTGTTGCATTTT+AGG + chr3_3:49529725-49529744 Msa0456130:intron 25.0%
!! TTAAATTGTTGCATTTTAGG+GGG + chr3_3:49529728-49529747 Msa0456130:intron 25.0%
!!! ATTTTGATAGATTTGAGTAG+GGG - chr3_3:49529804-49529823 None:intergenic 25.0%
!!! GTATTTTGATAGATTTGAGT+AGG - chr3_3:49529806-49529825 None:intergenic 25.0%
!!! TCACGCTTCATTAATTTTTT+AGG + chr3_3:49529936-49529955 Msa0456130:intron 25.0%
!!! AATTTTTTAGGTTTGTTGCA+AGG + chr3_3:49529948-49529967 Msa0456130:intron 25.0%
!! TTAAAATTCTAGAGAGAGAT+AGG + chr3_3:49530368-49530387 Msa0456130:intron 25.0%
!! TAAAATTCTAGAGAGAGATA+GGG + chr3_3:49530369-49530388 Msa0456130:intron 25.0%
! TTTCTCTATAAATAGAGACT+TGG + chr3_3:49531568-49531587 Msa0456130:intron 25.0%
! GACTAAAACTTCAAAAGAAA+GGG - chr3_3:49531655-49531674 None:intergenic 25.0%
! AGACTAAAACTTCAAAAGAA+AGG - chr3_3:49531656-49531675 None:intergenic 25.0%
!! TTAGTCTTTGATTAGTGAAA+TGG + chr3_3:49531669-49531688 Msa0456130:intron 25.0%
!! TTTGGTTGAGAAATTGATTT+GGG - chr3_3:49531840-49531859 None:intergenic 25.0%
!!! TTTTGGTTGAGAAATTGATT+TGG - chr3_3:49531841-49531860 None:intergenic 25.0%
! TATCTCATCATAGATCTATA+TGG - chr3_3:49531937-49531956 None:intergenic 25.0%
! ATCGGAATATAACCATTAAA+TGG - chr3_3:49531976-49531995 None:intergenic 25.0%
!! AATGAAAATTTTCAGAGTCT+TGG + chr3_3:49532000-49532019 Msa0456130:intron 25.0%
! CTTATTTGTGATGAAAATTC+AGG - chr3_3:49532033-49532052 None:intergenic 25.0%
!! TTTTCATCACAAATAAGTTG+TGG + chr3_3:49532036-49532055 Msa0456130:intron 25.0%
! AAAATTTGGCGTTAATTAGT+GGG + chr3_3:49532145-49532164 Msa0456130:intron 25.0%
!! TTATTTAAAGTAAACACTGG+GGG - chr3_3:49532913-49532932 None:intergenic 25.0%
!! ATAGTTTGTGAAATAAGTCA+CGG - chr3_3:49533058-49533077 None:intergenic 25.0%
! AAAGTTTGTGAAATAACTCA+CGG - chr3_3:49533182-49533201 None:intergenic 25.0%
! ATTAAAGAAAATAAGTCAGG+GGG - chr3_3:49533347-49533366 None:intergenic 25.0%
! TGGTATAATTATTGAAGTCA+CGG - chr3_3:49533504-49533523 None:intergenic 25.0%
! AGATTTGTGATATTAGAAGT+AGG - chr3_3:49533567-49533586 None:intergenic 25.0%
!! ATGAATGCAATTTGAGATAT+TGG - chr3_3:49533635-49533654 None:intergenic 25.0%
! TCTCAAATTGCATTCATATT+TGG + chr3_3:49533638-49533657 Msa0456130:intron 25.0%
! ATCGATGAATACATCAAAAT+AGG + chr3_3:49534049-49534068 Msa0456130:intron 25.0%
!! TGTTTTGCAAATAACTTATC+GGG - chr3_3:49534470-49534489 None:intergenic 25.0%
! TTATTTGCAAAACATCAAGA+GGG + chr3_3:49534476-49534495 Msa0456130:intron 25.0%
! GAATAAGAAATAAAAAGTGG+TGG + chr3_3:49535094-49535113 Msa0456130:intron 25.0%
! ATAAGAAATAAAAAGTGGTG+GGG + chr3_3:49535096-49535115 Msa0456130:intron 25.0%
! ATTAAATTTACCATTGGACA+TGG + chr3_3:49535234-49535253 Msa0456130:intron 25.0%
!! ATGGAGTACTATATACATAT+AGG - chr3_3:49535285-49535304 None:intergenic 25.0%
!! ATAAATAAGGGTATAACAGT+GGG - chr3_3:49535396-49535415 None:intergenic 25.0%
!! AATAAATAAGGGTATAACAG+TGG - chr3_3:49535397-49535416 None:intergenic 25.0%
! TTGAAAGAACAAAAAACGAA+AGG - chr3_3:49535965-49535984 None:intergenic 25.0%
!! TTTTTGTTCTTTCAAAAGCT+TGG + chr3_3:49535970-49535989 Msa0456130:intron 25.0%
!! TTTTGTTCTTTCAAAAGCTT+GGG + chr3_3:49535971-49535990 Msa0456130:intron 25.0%
! TTCCAGTTAATAATTACGTT+CGG - chr3_3:49536027-49536046 None:intergenic 25.0%
!! TGATTTTATGAAATTAGAGG+AGG + chr3_3:49536117-49536136 Msa0456130:intron 25.0%
! TTATTAGAGTAGAGATTAAG+AGG + chr3_3:49536173-49536192 Msa0456130:intron 25.0%
! TATTAGAGTAGAGATTAAGA+GGG + chr3_3:49536174-49536193 Msa0456130:intron 25.0%
! TCATCATTTAATGATGAATG+TGG + chr3_3:49536425-49536444 Msa0456130:intron 25.0%
! GATGTATGTGGTTAATAATA+TGG - chr3_3:49536452-49536471 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG - chr3_3:49536464-49536483 None:intergenic 25.0%
!!! TAGACACACATTCATTTTTT+TGG - chr3_3:49536559-49536578 None:intergenic 25.0%
! GTCATTGAAATACTACAAAT+CGG + chr3_3:49536589-49536608 Msa0456130:intron 25.0%
! GAAGATGTAATAATGACATT+AGG + chr3_3:49536646-49536665 Msa0456130:intron 25.0%
! GATTATGTATTTAATTGTGG+TGG - chr3_3:49536729-49536748 None:intergenic 25.0%
! GGAGATTATGTATTTAATTG+TGG - chr3_3:49536732-49536751 None:intergenic 25.0%
!!! ATGATTTTAAAGAAACGGAT+GGG - chr3_3:49536798-49536817 None:intergenic 25.0%
!!! AATGATTTTAAAGAAACGGA+TGG - chr3_3:49536799-49536818 None:intergenic 25.0%
!!! GGAGAATGATTTTAAAGAAA+CGG - chr3_3:49536803-49536822 None:intergenic 25.0%
! TAAAAATTAAAGAACCCCTT+TGG - chr3_3:49537100-49537119 None:intergenic 25.0%
! AAATACCAAGTAAGTTTACT+AGG + chr3_3:49537124-49537143 Msa0456130:CDS 25.0%
! TTTACTGAAAATTACTCTCT+TGG + chr3_3:49528067-49528086 Msa0456130:CDS 25.0%
! AAATATGTGTACATCAAACA+TGG - chr3_3:49537328-49537347 None:intergenic 25.0%
!! TTTTAGATGAATGGCTTAAT+CGG + chr3_3:49537442-49537461 Msa0456130:CDS 25.0%
! TTTCTTGTCAGTATACATAA+TGG + chr3_3:49537543-49537562 Msa0456130:intron 25.0%
! TTGATGAGAATTGTGAAAAA+AGG - chr3_3:49537758-49537777 None:intergenic 25.0%
! GCTGTGATTATAAATTATGA+TGG + chr3_3:49537849-49537868 Msa0456130:intron 25.0%
!! TCAATAATCCCTTTTAAATC+TGG - chr3_3:49537906-49537925 None:intergenic 25.0%
! AAATTACTTCGTTCTTATGA+GGG + chr3_3:49537978-49537997 Msa0456130:CDS 25.0%
GCACTAAATGGAAAGTTTAT+TGG + chr3_3:49527999-49528018 Msa0456130:CDS 30.0%
!! TTGGTGGTGTTTGAATATAA+AGG + chr3_3:49528100-49528119 Msa0456130:CDS 30.0%
!! AATCTATTTCTAGTGCATTC+TGG - chr3_3:49528156-49528175 None:intergenic 30.0%
! TGATGAATCAGTTGAGATTT+TGG + chr3_3:49528228-49528247 Msa0456130:CDS 30.0%
! TTTTGGATGAATGGCTTAAT+CGG + chr3_3:49528245-49528264 Msa0456130:CDS 30.0%
!! AGTGTGTACCACTTTTAAAT+GGG + chr3_3:49528718-49528737 Msa0456130:intron 30.0%
TCAATAACCCCATTTAAAAG+TGG - chr3_3:49528729-49528748 None:intergenic 30.0%
GAAATTACTTCGTTGTTATG+AGG + chr3_3:49528800-49528819 Msa0456130:CDS 30.0%
!!! ACATTGTTGTTTTGAGTGAT+AGG + chr3_3:49528982-49529001 Msa0456130:intron 30.0%
TCATTGTGTTCATACATAAC+GGG - chr3_3:49529174-49529193 None:intergenic 30.0%
GTACCCATTTCCAAAATATT+GGG + chr3_3:49529464-49529483 Msa0456130:intron 30.0%
! TTTTTCTTCTCTAAACCTAG+TGG + chr3_3:49529552-49529571 Msa0456130:intron 30.0%
GGTAAATAAAATGATCCACT+AGG - chr3_3:49529570-49529589 None:intergenic 30.0%
! TTAACTGGTTTCATTAGTCT+AGG - chr3_3:49529591-49529610 None:intergenic 30.0%
!! TAAATTGTTGCATTTTAGGG+GGG + chr3_3:49529729-49529748 Msa0456130:intron 30.0%
! TTTTGATAGATTTGAGTAGG+GGG - chr3_3:49529803-49529822 None:intergenic 30.0%
TCAAAATACACTACTGAACA+CGG + chr3_3:49529817-49529836 Msa0456130:intron 30.0%
ATTTCTTGAGTTAAGACACA+CGG + chr3_3:49529895-49529914 Msa0456130:intron 30.0%
GAAGAGAAGTTATGAACATT+TGG + chr3_3:49529984-49530003 Msa0456130:intron 30.0%
! TCGTTAACTTTAATAGTGGA+CGG + chr3_3:49530068-49530087 Msa0456130:intron 30.0%
!! GCATGATTTTTGAAGAACAA+GGG + chr3_3:49530187-49530206 Msa0456130:intron 30.0%
!!! TCTTTTCTTTCAAGTTTGCA+AGG + chr3_3:49530481-49530500 Msa0456130:intron 30.0%
GTAGGTAAATCTCTATTGTT+AGG + chr3_3:49530519-49530538 Msa0456130:intron 30.0%
CTTTGATAGATGATTATCGT+AGG - chr3_3:49530693-49530712 None:intergenic 30.0%
! AAATCGTCGATTAAACGATA+CGG + chr3_3:49530798-49530817 Msa0456130:intron 30.0%
TTCATGTCTAAATAATGCTG+TGG - chr3_3:49530830-49530849 None:intergenic 30.0%
! GTGTTGAATTGATTGTTGTT+GGG - chr3_3:49531697-49531716 None:intergenic 30.0%
! TGGGTAATCAGAAGAATTTT+GGG - chr3_3:49531719-49531738 None:intergenic 30.0%
! ATGGGTAATCAGAAGAATTT+TGG - chr3_3:49531720-49531739 None:intergenic 30.0%
!! TGGGATTTTGGTAGTTAAAT+GGG - chr3_3:49531738-49531757 None:intergenic 30.0%
!! TTGGGATTTTGGTAGTTAAA+TGG - chr3_3:49531739-49531758 None:intergenic 30.0%
!!! GTTGATAATTGTTGGGATTT+TGG - chr3_3:49531750-49531769 None:intergenic 30.0%
!! TTTGGGTGTTGATAATTGTT+GGG - chr3_3:49531757-49531776 None:intergenic 30.0%
!! ATTTGGGTGTTGATAATTGT+TGG - chr3_3:49531758-49531777 None:intergenic 30.0%
!! GTTGGTTTGGAAATTGATTT+GGG - chr3_3:49531807-49531826 None:intergenic 30.0%
!! TGTTGGTTTGGAAATTGATT+TGG - chr3_3:49531808-49531827 None:intergenic 30.0%
!!! AGAAATTGATTTGGGTTTTG+AGG - chr3_3:49531832-49531851 None:intergenic 30.0%
! TTTGAGGCAAAACCAAAATT+AGG - chr3_3:49531877-49531896 None:intergenic 30.0%
CTATATGGATGAAAGTTGTT+TGG - chr3_3:49531922-49531941 None:intergenic 30.0%
GGAATATAACCATTAAATGG+AGG - chr3_3:49531973-49531992 None:intergenic 30.0%
ATGGAACACTGAACAAAATT+TGG + chr3_3:49532131-49532150 Msa0456130:intron 30.0%
CAAAATTTGGCGTTAATTAG+TGG + chr3_3:49532144-49532163 Msa0456130:intron 30.0%
! ATTAGTGGGTGGATAAAATA+TGG + chr3_3:49532159-49532178 Msa0456130:intron 30.0%
AAAAGGAAAAAAGAAAGGCA+AGG + chr3_3:49532599-49532618 Msa0456130:intron 30.0%
! GTTTTTCTCTTGTTAAACTG+CGG - chr3_3:49532730-49532749 None:intergenic 30.0%
AAAAGATCTGTTGGAAAACT+TGG + chr3_3:49532812-49532831 Msa0456130:intron 30.0%
! TAGTTTGTGAAATAAGTCAC+GGG - chr3_3:49533057-49533076 None:intergenic 30.0%
AAGTTTGTGAAATAACTCAC+GGG - chr3_3:49533181-49533200 None:intergenic 30.0%
TTAAAGAAAATAAGTCAGGG+GGG - chr3_3:49533346-49533365 None:intergenic 30.0%
ATAATTATTGAAGTCACGGA+TGG - chr3_3:49533500-49533519 None:intergenic 30.0%
CAAATAGTTAAAGTCACAGA+TGG - chr3_3:49533524-49533543 None:intergenic 30.0%
TCTGATGCAATTTGTGATAT+TGG - chr3_3:49533605-49533624 None:intergenic 30.0%
AACATTACATCGTCATATGT+GGG - chr3_3:49533854-49533873 None:intergenic 30.0%
AAACATTACATCGTCATATG+TGG - chr3_3:49533855-49533874 None:intergenic 30.0%
AGTAGTTATCACTACTTGAA+AGG - chr3_3:49533928-49533947 None:intergenic 30.0%
AATAGGAAGTAGTACAACAT+TGG + chr3_3:49534066-49534085 Msa0456130:intron 30.0%
TAACATGTAGTATTCCTTGT+AGG - chr3_3:49534168-49534187 None:intergenic 30.0%
TACTACATGTTAGTGAAATG+CGG + chr3_3:49534176-49534195 Msa0456130:intron 30.0%
GAAAAATTGTCCTAAAGCAT+GGG + chr3_3:49534246-49534265 Msa0456130:intron 30.0%
!! CTAATTGATTTGACGAAAGT+TGG - chr3_3:49534431-49534450 None:intergenic 30.0%
GTTATTTGCAAAACATCAAG+AGG + chr3_3:49534475-49534494 Msa0456130:intron 30.0%
! TTCAATTTTTACCTCTCCAA+GGG - chr3_3:49535140-49535159 None:intergenic 30.0%
! ATTCAATTTTTACCTCTCCA+AGG - chr3_3:49535141-49535160 None:intergenic 30.0%
TTAAGAGAGAGAAAATGATG+TGG + chr3_3:49535171-49535190 Msa0456130:intron 30.0%
! AGTGTTGGGAATTAAAAAAG+TGG + chr3_3:49535194-49535213 Msa0456130:intron 30.0%
GTGTTGGGAATTAAAAAAGT+GGG + chr3_3:49535195-49535214 Msa0456130:intron 30.0%
!! ATTAAAAAAGTGGGTGTTGA+AGG + chr3_3:49535204-49535223 Msa0456130:intron 30.0%
AACAATAATTATGAGACGGA+TGG - chr3_3:49535304-49535323 None:intergenic 30.0%
AGATAGTATAGTAGTCAAGT+TGG - chr3_3:49535429-49535448 None:intergenic 30.0%
AGACAAACCAATAGTTGATT+AGG - chr3_3:49535717-49535736 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr3_3:49535871-49535890 Msa0456130:intron 30.0%
AACCGAACGTAATTATTAAC+TGG + chr3_3:49536022-49536041 Msa0456130:intron 30.0%
AAATTAGAGGAGGATAATGA+AGG + chr3_3:49536127-49536146 Msa0456130:intron 30.0%
ATTAGAGTAGAGATTAAGAG+GGG + chr3_3:49536175-49536194 Msa0456130:intron 30.0%
!!! TGCTTATATTTTGAAACGGA+TGG + chr3_3:49536502-49536521 Msa0456130:intron 30.0%
GTTTACCATTAACAATGAAG+AGG + chr3_3:49536687-49536706 Msa0456130:intron 30.0%
TTCTCCAAACTAATCTTCAA+AGG + chr3_3:49536817-49536836 Msa0456130:intron 30.0%
! CAATCCTTTGAAGATTAGTT+TGG - chr3_3:49536824-49536843 None:intergenic 30.0%
! CTAAAGTAAACTGTACTGAT+AGG - chr3_3:49536855-49536874 None:intergenic 30.0%
CATGTTCTATTCCTATAGAA+GGG + chr3_3:49537042-49537061 Msa0456130:intron 30.0%
AAATTAAACGTCCCTTCTAT+AGG - chr3_3:49537056-49537075 None:intergenic 30.0%
! ACCTTTTTATTAGTGACCAA+AGG + chr3_3:49537081-49537100 Msa0456130:intron 30.0%
! CCTTTTTATTAGTGACCAAA+GGG + chr3_3:49537082-49537101 Msa0456130:intron 30.0%
! CTTTTTATTAGTGACCAAAG+GGG + chr3_3:49537083-49537102 Msa0456130:intron 30.0%
GCACTAAATGGAAAGTTTAT+TGG + chr3_3:49527999-49528018 Msa0456130:CDS 30.0%
AAAAAATCAATGGAGAGATC+TGG + chr3_3:49537220-49537239 Msa0456130:CDS 30.0%
! CACTTGAGATTTTAGATGAA+TGG + chr3_3:49537433-49537452 Msa0456130:CDS 30.0%
TGTGTGTAATGTAAAACTCT+TGG - chr3_3:49537631-49537650 None:intergenic 30.0%
TACATTACACACATATATGC+AGG + chr3_3:49537638-49537657 Msa0456130:intron 30.0%
TTCATCAATAAATTGGCCAA+AGG + chr3_3:49537688-49537707 Msa0456130:CDS 30.0%
GTATGTTCTACCAGATTAAT+TGG - chr3_3:49537782-49537801 None:intergenic 30.0%
AGTCTGTACCAGATTTAAAA+GGG + chr3_3:49537895-49537914 Msa0456130:intron 30.0%
AAAAGGGATTATTGAGAACA+AGG + chr3_3:49537911-49537930 Msa0456130:CDS 30.0%
GAAATTACTTCGTTCTTATG+AGG + chr3_3:49537977-49537996 Msa0456130:CDS 30.0%
TCTGTAGTCTTTATCAACAC+TGG - chr3_3:49527977-49527996 None:intergenic 35.0%
! GTGTTGATAAAGACTACAGA+TGG + chr3_3:49527977-49527996 Msa0456130:CDS 35.0%
!! TGGAGAGATTTGGTTTGAAA+AGG + chr3_3:49528033-49528052 Msa0456130:CDS 35.0%
!! GGAGAGATTTGGTTTGAAAA+GGG + chr3_3:49528034-49528053 Msa0456130:CDS 35.0%
!! AGATTTGGTTTGAAAAGGGT+TGG + chr3_3:49528038-49528057 Msa0456130:CDS 35.0%
GAAAATTACTCTCTTGGACA+TGG + chr3_3:49528073-49528092 Msa0456130:CDS 35.0%
! CAGTTGAGATTTTGGATGAA+TGG + chr3_3:49528236-49528255 Msa0456130:CDS 35.0%
ACATAAGAAAGTTCGAGGTT+TGG + chr3_3:49528309-49528328 Msa0456130:intron 35.0%
TACATTGCACACATATTTGC+AGG + chr3_3:49528454-49528473 Msa0456130:intron 35.0%
TTCATCAATAAATTGGCCAC+AGG + chr3_3:49528504-49528523 Msa0456130:CDS 35.0%
CTACTCATCTGGTAGAAAAT+CGG + chr3_3:49528596-49528615 Msa0456130:CDS 35.0%
!! CAGTGTGTACCACTTTTAAA+TGG + chr3_3:49528717-49528736 Msa0456130:intron 35.0%
!! GTGTGTACCACTTTTAAATG+GGG + chr3_3:49528719-49528738 Msa0456130:intron 35.0%
AAATGGGGTTATTGAGAACA+AGG + chr3_3:49528734-49528753 Msa0456130:CDS 35.0%
TGAGAACAAGGATAAGAATG+TGG + chr3_3:49528746-49528765 Msa0456130:CDS 35.0%
!!! CTCTTGTTTTTAAGTGGAAG+TGG + chr3_3:49528855-49528874 Msa0456130:CDS 35.0%
GGTACCCATTTCCAAAATAT+TGG + chr3_3:49529463-49529482 Msa0456130:intron 35.0%
!! GGTCCCAATATTTTGGAAAT+GGG - chr3_3:49529470-49529489 None:intergenic 35.0%
!! AGGTCCCAATATTTTGGAAA+TGG - chr3_3:49529471-49529490 None:intergenic 35.0%
! TCTTGTAGGTCCCAATATTT+TGG - chr3_3:49529477-49529496 None:intergenic 35.0%
ACCAGTTAAAATGGGATACT+AGG + chr3_3:49529602-49529621 Msa0456130:intron 35.0%
TCAAGAAATGTCACAGTGTT+TGG - chr3_3:49529763-49529782 None:intergenic 35.0%
TTTCTTGAGTTAAGACACAC+GGG + chr3_3:49529896-49529915 Msa0456130:intron 35.0%
!!! TTTTTAGGTTTGTTGCAAGG+AGG + chr3_3:49529951-49529970 Msa0456130:intron 35.0%
!!! TTTTAGGTTTGTTGCAAGGA+GGG + chr3_3:49529952-49529971 Msa0456130:intron 35.0%
!! GAACATTTGGTTTGTTTGTG+TGG + chr3_3:49529997-49530016 Msa0456130:intron 35.0%
TTTGTTTGTGTGGAACGTTT+GGG + chr3_3:49530007-49530026 Msa0456130:intron 35.0%
!! GGCATGATTTTTGAAGAACA+AGG + chr3_3:49530186-49530205 Msa0456130:intron 35.0%
ACATGAATAATGTTGTCGAG+TGG + chr3_3:49530843-49530862 Msa0456130:intron 35.0%
!! AATAAAGGCGTAAAAGCGTT+AGG - chr3_3:49530952-49530971 None:intergenic 35.0%
ATGTATAAGACCATCTCCAA+TGG + chr3_3:49531203-49531222 Msa0456130:intron 35.0%
TGTATAAGACCATCTCCAAT+GGG + chr3_3:49531204-49531223 Msa0456130:intron 35.0%
GTTGAAGACTATTGAACCAT+TGG + chr3_3:49531241-49531260 Msa0456130:intron 35.0%
CTTGTTGAAGACATATGACA+TGG + chr3_3:49531271-49531290 Msa0456130:intron 35.0%
GAGACTTGGATCATTTGATT+TGG + chr3_3:49531582-49531601 Msa0456130:intron 35.0%
! GGTGTTGAATTGATTGTTGT+TGG - chr3_3:49531698-49531717 None:intergenic 35.0%
! GTTGGTTGGGAAATTGATTT+GGG - chr3_3:49531774-49531793 None:intergenic 35.0%
! TGTTGGTTGGGAAATTGATT+TGG - chr3_3:49531775-49531794 None:intergenic 35.0%
!!! GGAAATTGATTTGGGTTTTG+AGG - chr3_3:49531799-49531818 None:intergenic 35.0%
!!! TAGGCATGTTTTGAGGATTT+TGG - chr3_3:49531858-49531877 None:intergenic 35.0%
! CCAAAATTAGGCATGTTTTG+AGG - chr3_3:49531865-49531884 None:intergenic 35.0%
! CCTCAAAACATGCCTAATTT+TGG + chr3_3:49531862-49531881 Msa0456130:intron 35.0%
GGATGAGTGATTGAAATTTG+AGG - chr3_3:49531893-49531912 None:intergenic 35.0%
! ATGAAAGTTGTTTGGAACAG+AGG - chr3_3:49531914-49531933 None:intergenic 35.0%
!! TTAAATGGAGGTGTTTGAGA+TGG - chr3_3:49531961-49531980 None:intergenic 35.0%
TCTCAAACACCTCCATTTAA+TGG + chr3_3:49531961-49531980 Msa0456130:intron 35.0%
TCATCACAAATAAGTTGTGG+TGG + chr3_3:49532039-49532058 Msa0456130:intron 35.0%
! TTTTGTTCAGTGTTCCATGA+TGG - chr3_3:49532129-49532148 None:intergenic 35.0%
CCCACATGCATATATTTCTT+GGG - chr3_3:49532409-49532428 None:intergenic 35.0%
CCCAAGAAATATATGCATGT+GGG + chr3_3:49532406-49532425 Msa0456130:intron 35.0%
TCCCACATGCATATATTTCT+TGG - chr3_3:49532410-49532429 None:intergenic 35.0%
AGAAATGAAGATGCAAGAGA+TGG + chr3_3:49532665-49532684 Msa0456130:intron 35.0%
TGACAGGAAAAAAGATCTGT+TGG + chr3_3:49532803-49532822 Msa0456130:intron 35.0%
AGTTTGTGAAATAAGTCACG+GGG - chr3_3:49533056-49533075 None:intergenic 35.0%
ATGGGCACAAAGTTAGTAAT+GGG - chr3_3:49533109-49533128 None:intergenic 35.0%
AATGGGCACAAAGTTAGTAA+TGG - chr3_3:49533110-49533129 None:intergenic 35.0%
AGTTTGTGAAATAACTCACG+GGG - chr3_3:49533180-49533199 None:intergenic 35.0%
! ATTAATGGGCAAATAGTGTG+TGG - chr3_3:49533271-49533290 None:intergenic 35.0%
! TTGACAAATAGTGGAGATAG+TGG - chr3_3:49533467-49533486 None:intergenic 35.0%
GAAGCAACATTGACAAATAG+TGG - chr3_3:49533476-49533495 None:intergenic 35.0%
TCATCGTCGAAAAAAACTAG+AGG + chr3_3:49533727-49533746 Msa0456130:intron 35.0%
AAAAAACTAGAGGAAGGTAG+TGG + chr3_3:49533737-49533756 Msa0456130:intron 35.0%
TGATATACCTTCTTTGTTGG+TGG - chr3_3:49533969-49533988 None:intergenic 35.0%
TGGTGATATACCTTCTTTGT+TGG - chr3_3:49533972-49533991 None:intergenic 35.0%
! GTTGTGGTACATTTTGCTAA+TGG - chr3_3:49533992-49534011 None:intergenic 35.0%
ACAATGCGAATGTTAGCATA+TGG + chr3_3:49534010-49534029 Msa0456130:intron 35.0%
TGCTTACTTAGATTCTGCAA+AGG + chr3_3:49534091-49534110 Msa0456130:intron 35.0%
TATTCCTTGTAGGTCATCTT+GGG - chr3_3:49534158-49534177 None:intergenic 35.0%
ACTACATGTTAGTGAAATGC+GGG + chr3_3:49534177-49534196 Msa0456130:intron 35.0%
GGAAAAATTGTCCTAAAGCA+TGG + chr3_3:49534245-49534264 Msa0456130:intron 35.0%
TTCACAAAGAAATTCACCCT+TGG - chr3_3:49534361-49534380 None:intergenic 35.0%
ATGACATACTATCTAGCTGA+TGG + chr3_3:49534389-49534408 Msa0456130:intron 35.0%
TGACGAAAGTTGGATAAGAA+GGG - chr3_3:49534421-49534440 None:intergenic 35.0%
TTGACGAAAGTTGGATAAGA+AGG - chr3_3:49534422-49534441 None:intergenic 35.0%
AAGCACATATGGACAAAGTT+TGG + chr3_3:49534818-49534837 Msa0456130:intron 35.0%
! AAATAAAAAGTGGTGGGGTA+GGG + chr3_3:49535101-49535120 Msa0456130:intron 35.0%
! AGAAAATGATGTGGAGTGTT+GGG + chr3_3:49535180-49535199 Msa0456130:intron 35.0%
CAAATTTAGACCATGTCCAA+TGG - chr3_3:49535247-49535266 None:intergenic 35.0%
GGTCTAAATTTGCACATGAT+AGG + chr3_3:49535255-49535274 Msa0456130:intron 35.0%
AAACGACTGATATTGTGAGA+TGG + chr3_3:49535540-49535559 Msa0456130:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr3_3:49535625-49535644 None:intergenic 35.0%
TTCCTTAATCTGTGTGCAAT+TGG - chr3_3:49535651-49535670 None:intergenic 35.0%
ATTGCACACAGATTAAGGAA+TGG + chr3_3:49535651-49535670 Msa0456130:intron 35.0%
GGAGGATAATGAAGGAAATT+TGG + chr3_3:49536135-49536154 Msa0456130:intron 35.0%
TAGAGATTAAGAGGGGAATA+AGG + chr3_3:49536182-49536201 Msa0456130:intron 35.0%
GCAAACCTCTTCATTGTTAA+TGG - chr3_3:49536695-49536714 None:intergenic 35.0%
ATGGATGAAAGAGTTTGAAG+TGG - chr3_3:49536753-49536772 None:intergenic 35.0%
ACTTCAAACTCTTTCATCCA+TGG + chr3_3:49536752-49536771 Msa0456130:intron 35.0%
!! TTTTAAAGAAACGGATGGGA+AGG - chr3_3:49536794-49536813 None:intergenic 35.0%
CCTTCTATAGGAATAGAACA+TGG - chr3_3:49537044-49537063 None:intergenic 35.0%
CCATGTTCTATTCCTATAGA+AGG + chr3_3:49537041-49537060 Msa0456130:intron 35.0%
CCCTTTGGTCACTAATAAAA+AGG - chr3_3:49537085-49537104 None:intergenic 35.0%
TGTCTCCTAGTAAACTTACT+TGG - chr3_3:49537132-49537151 None:intergenic 35.0%
AGTAAGTTTACTAGGAGACA+TGG + chr3_3:49537132-49537151 Msa0456130:CDS 35.0%
GAAAATTACTCTCTTGGACA+TGG + chr3_3:49528073-49528092 Msa0456130:CDS 35.0%
CTTATGTGTTTGAGGAGAAA+CGG - chr3_3:49537493-49537512 None:intergenic 35.0%
! AACTCTTGGAGAGCATATTT+AGG - chr3_3:49537617-49537636 None:intergenic 35.0%
TCTCATCAAGCCAATTAATC+TGG + chr3_3:49537769-49537788 Msa0456130:CDS 35.0%
TAATCTGGTAGAACATACTC+TGG + chr3_3:49537784-49537803 Msa0456130:CDS 35.0%
CAGTCTGTACCAGATTTAAA+AGG + chr3_3:49537894-49537913 Msa0456130:intron 35.0%
AGACTACAGATGGCACTAAA+TGG + chr3_3:49527987-49528006 Msa0456130:CDS 40.0%
TGAATGGCTTAATCGGAAGA+AGG + chr3_3:49528252-49528271 Msa0456130:CDS 40.0%
! AGAAAGTTCGAGGTTTGGTT+TGG + chr3_3:49528314-49528333 Msa0456130:intron 40.0%
TCTCATAAAGCCTACTCATC+TGG + chr3_3:49528585-49528604 Msa0456130:CDS 40.0%
! CGATTTTCTACCAGATGAGT+AGG - chr3_3:49528598-49528617 None:intergenic 40.0%
TCATCTGGTAGAAAATCGGA+TGG + chr3_3:49528600-49528619 Msa0456130:CDS 40.0%
TGGTAGAAAATCGGATGGTA+AGG + chr3_3:49528605-49528624 Msa0456130:intron 40.0%
AAGAATGTGGTACTGCAGAT+TGG + chr3_3:49528759-49528778 Msa0456130:CDS 40.0%
AGAATGTGGTACTGCAGATT+GGG + chr3_3:49528760-49528779 Msa0456130:CDS 40.0%
!!! GGTTGGCTCTTGTTTTTAAG+TGG + chr3_3:49528849-49528868 Msa0456130:CDS 40.0%
GGGAACGATTCAACTTATCA+CGG - chr3_3:49529378-49529397 None:intergenic 40.0%
!! GCCTAGTATCCCATTTTAAC+TGG - chr3_3:49529606-49529625 None:intergenic 40.0%
GTTAAAATGGGATACTAGGC+TGG + chr3_3:49529606-49529625 Msa0456130:intron 40.0%
ATTGCATGTGGACGATGATT+TGG + chr3_3:49529842-49529861 Msa0456130:intron 40.0%
TTGCATGTGGACGATGATTT+GGG + chr3_3:49529843-49529862 Msa0456130:intron 40.0%
!! TTTAGGTTTGTTGCAAGGAG+GGG + chr3_3:49529953-49529972 Msa0456130:intron 40.0%
GTTTGTTTGTGTGGAACGTT+TGG + chr3_3:49530006-49530025 Msa0456130:intron 40.0%
CTTCAAAAATCATGCCTCTC+TGG - chr3_3:49530182-49530201 None:intergenic 40.0%
!! CTTCATAGCAAGAGTGTTAG+AGG + chr3_3:49530408-49530427 Msa0456130:intron 40.0%
!! ATAGCAAGAGTGTTAGAGGT+TGG + chr3_3:49530412-49530431 Msa0456130:intron 40.0%
AGGCTATCATGAAGATGTGT+AGG + chr3_3:49530501-49530520 Msa0456130:intron 40.0%
GTATAAGACCATCTCCAATG+GGG + chr3_3:49531205-49531224 Msa0456130:intron 40.0%
TTCAATAACCCCATTGGAGA+TGG - chr3_3:49531216-49531235 None:intergenic 40.0%
TCTCCAATGGGGTTATTGAA+AGG + chr3_3:49531216-49531235 Msa0456130:intron 40.0%
CTCCAATGGGGTTATTGAAA+GGG + chr3_3:49531217-49531236 Msa0456130:intron 40.0%
TTCAACAAGCAAGCTTCCAA+TGG - chr3_3:49531260-49531279 None:intergenic 40.0%
GTTGAAGACATATGACATGG+AGG + chr3_3:49531274-49531293 Msa0456130:intron 40.0%
ACATATGACATGGAGGAGTT+GGG + chr3_3:49531281-49531300 Msa0456130:intron 40.0%
CGCTGTGATTGTGTGAAAAA+TGG + chr3_3:49531354-49531373 Msa0456130:intron 40.0%
AGAAAGTGGTTGGGAAGATT+AGG + chr3_3:49531432-49531451 Msa0456130:intron 40.0%
!!! GATTTGGGTTTTGAGGATGT+TGG - chr3_3:49531792-49531811 None:intergenic 40.0%
!!! GATTTGGGTTTTGAGGATGT+TGG - chr3_3:49531792-49531811 None:intergenic 40.0%
ATCTAATGAAGTCACTCCAG+AGG + chr3_3:49532071-49532090 Msa0456130:intron 40.0%
!!! TGCTGGTTTTTCTTGCTCTT+AGG - chr3_3:49532105-49532124 None:intergenic 40.0%
AGAAAAACCAGCAACCATCA+TGG + chr3_3:49532112-49532131 Msa0456130:intron 40.0%
ATTTGGCGTTAATTAGTGGG+TGG + chr3_3:49532148-49532167 Msa0456130:intron 40.0%
TATGGAACATCCAGTGTTGT+CGG + chr3_3:49532177-49532196 Msa0456130:intron 40.0%
ACCAGACAAGTGAAGCATAT+TGG + chr3_3:49532205-49532224 Msa0456130:intron 40.0%
CCAGACAAGTGAAGCATATT+GGG + chr3_3:49532206-49532225 Msa0456130:intron 40.0%
CAGACAAGTGAAGCATATTG+GGG + chr3_3:49532207-49532226 Msa0456130:intron 40.0%
GCCCAAGAAATATATGCATG+TGG + chr3_3:49532405-49532424 Msa0456130:intron 40.0%
!! AATGTTGGCTTAGGAAGTAG+TGG + chr3_3:49532507-49532526 Msa0456130:intron 40.0%
TGGATCTAAGAGATCTCATG+AGG + chr3_3:49532527-49532546 Msa0456130:intron 40.0%
AGGGAGGCAGCTAAAAAAAA+AGG + chr3_3:49532582-49532601 Msa0456130:intron 40.0%
CTAACTTTGTGCCCATTCTA+TGG + chr3_3:49533113-49533132 Msa0456130:intron 40.0%
AGTGAGGAAGACCATAGAAT+GGG - chr3_3:49533127-49533146 None:intergenic 40.0%
TAGTGAGGAAGACCATAGAA+TGG - chr3_3:49533128-49533147 None:intergenic 40.0%
!! AGTGGTGGACAGTTAGTAAT+GGG - chr3_3:49533243-49533262 None:intergenic 40.0%
! CTGACAAATAGTGGAGATAG+TGG - chr3_3:49533403-49533422 None:intergenic 40.0%
AAAGCAACGCTGACAAATAG+TGG - chr3_3:49533412-49533431 None:intergenic 40.0%
! TGTCTTCAGCATCACGTTTT+GGG - chr3_3:49533685-49533704 None:intergenic 40.0%
CGTCGAAAAAAACTAGAGGA+AGG + chr3_3:49533731-49533750 Msa0456130:intron 40.0%
AGTAGTCGTCAATGAGTCTT+TGG - chr3_3:49533820-49533839 None:intergenic 40.0%
ACGATGTAATGTTTCGTCGT+CGG + chr3_3:49533861-49533880 Msa0456130:intron 40.0%
!! TAATGTTTCGTCGTCGGTTT+CGG + chr3_3:49533867-49533886 Msa0456130:intron 40.0%
TGCTAACATTCGCATTGTTG+TGG - chr3_3:49534008-49534027 None:intergenic 40.0%
GTATTCCTTGTAGGTCATCT+TGG - chr3_3:49534159-49534178 None:intergenic 40.0%
CTACATGTTAGTGAAATGCG+GGG + chr3_3:49534178-49534197 Msa0456130:intron 40.0%
TACATGTTAGTGAAATGCGG+GGG + chr3_3:49534179-49534198 Msa0456130:intron 40.0%
!! GAGTATTGACTGTATGCACT+GGG + chr3_3:49534219-49534238 Msa0456130:intron 40.0%
AATTGTCCTAAAGCATGGGA+AGG + chr3_3:49534250-49534269 Msa0456130:intron 40.0%
AATTGACCTTCCCATGCTTT+AGG - chr3_3:49534259-49534278 None:intergenic 40.0%
ATGGGAAGGTCAATTTACCA+GGG + chr3_3:49534264-49534283 Msa0456130:intron 40.0%
TGTTCCACATCATCAAACAC+TGG - chr3_3:49534328-49534347 None:intergenic 40.0%
!! AGTGTTTGATGATGTGGAAC+AGG + chr3_3:49534327-49534346 Msa0456130:intron 40.0%
!! GTGTTTGATGATGTGGAACA+GGG + chr3_3:49534328-49534347 Msa0456130:intron 40.0%
AACTTATCGGGTTCACTTTG+AGG - chr3_3:49534458-49534477 None:intergenic 40.0%
CAAAACATCAAGAGGGATGT+CGG + chr3_3:49534483-49534502 Msa0456130:intron 40.0%
! TTGTGGGACATAACCGATTT+GGG + chr3_3:49534572-49534591 Msa0456130:intron 40.0%
CCTCATGTTGATACCCAAAT+CGG - chr3_3:49534588-49534607 None:intergenic 40.0%
GAGATACATATGCTCAACGT+TGG + chr3_3:49534648-49534667 Msa0456130:intron 40.0%
!! ACCGATTTTGAGCAATCTGA+GGG + chr3_3:49534671-49534690 Msa0456130:intron 40.0%
TCCCTCAGATTGCTCAAAAT+CGG - chr3_3:49534675-49534694 None:intergenic 40.0%
! CGCACATGATTTGCAAAAGT+GGG - chr3_3:49534740-49534759 None:intergenic 40.0%
! ACGCACATGATTTGCAAAAG+TGG - chr3_3:49534741-49534760 None:intergenic 40.0%
AACATTTGGATCACGCAACT+CGG - chr3_3:49534771-49534790 None:intergenic 40.0%
TGCAATGCGTGATGAACATT+TGG - chr3_3:49534785-49534804 None:intergenic 40.0%
TTTGTCCATATGTGCTTCAC+TGG - chr3_3:49534815-49534834 None:intergenic 40.0%
! GAAATAAAAAGTGGTGGGGT+AGG + chr3_3:49535100-49535119 Msa0456130:intron 40.0%
TTGAATGAAAACCCTTGGAG+AGG + chr3_3:49535126-49535145 Msa0456130:intron 40.0%
GAGAAAATGATGTGGAGTGT+TGG + chr3_3:49535179-49535198 Msa0456130:intron 40.0%
GACTGATATTGTGAGATGGA+AGG + chr3_3:49535544-49535563 Msa0456130:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr3_3:49535875-49535894 None:intergenic 40.0%
AGCCAATTGCACACAGATTA+AGG + chr3_3:49535646-49535665 Msa0456130:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr3_3:49535875-49535894 Msa0456130:intron 40.0%
! CGTGTTCCAAGAAAAGCTTT+TGG + chr3_3:49535935-49535954 Msa0456130:intron 40.0%
! GTAGAGTCGCACGATTTTAT+TGG + chr3_3:49536624-49536643 Msa0456130:intron 40.0%
TGTTGCATGTGTGATATGTG+TGG - chr3_3:49536894-49536913 None:intergenic 40.0%
TCAGGAGTCTTTATCAACAC+TGG - chr3_3:49537174-49537193 None:intergenic 40.0%
! GTGTTGATAAAGACTCCTGA+TGG + chr3_3:49537174-49537193 Msa0456130:CDS 40.0%
ACTTTCCATTTAGTGCCATC+AGG - chr3_3:49527995-49528014 None:intergenic 40.0%
! TGGAGAGATCTGGTTTGAAA+AGG + chr3_3:49537230-49537249 Msa0456130:CDS 40.0%
! GGAGAGATCTGGTTTGAAAA+GGG + chr3_3:49537231-49537250 Msa0456130:CDS 40.0%
! AGATCTGGTTTGAAAAGGGT+TGG + chr3_3:49537235-49537254 Msa0456130:CDS 40.0%
CATATTTGACCTGAATGCTG+TGG + chr3_3:49537341-49537360 Msa0456130:CDS 40.0%
! AAGCTATTTCCACAGCATTC+AGG - chr3_3:49537353-49537372 None:intergenic 40.0%
TGAATGGCTTAATCGGAAGA+AGG + chr3_3:49528252-49528271 Msa0456130:CDS 40.0%
CGGACTTTCTTATGTGTTTG+AGG - chr3_3:49537501-49537520 None:intergenic 40.0%
CAAACACATAAGAAAGTCCG+AGG + chr3_3:49537501-49537520 Msa0456130:CDS 40.0%
ACATAAGAAAGTCCGAGGTT+TGG + chr3_3:49537506-49537525 Msa0456130:intron 40.0%
CAAGAAACCAAACCAAACCT+CGG - chr3_3:49528324-49528343 None:intergenic 40.0%
AAGAATGTGATGCTGCTGAT+TGG + chr3_3:49537936-49537955 Msa0456130:CDS 40.0%
! AGAATGTGATGCTGCTGATT+GGG + chr3_3:49537937-49537956 Msa0456130:CDS 40.0%
TCACTGTTTGCAAGTGAAAG+TGG + chr3_3:49538032-49538051 Msa0456130:CDS 40.0%
!! AGTGAAAGTGGACTGAAATC+AGG + chr3_3:49538044-49538063 Msa0456130:CDS 40.0%
TGTCGTCGAGGAGAAACAAA+AGG - chr3_3:49528292-49528311 None:intergenic 45.0%
CGAACTTTCTTATGTCGTCG+AGG - chr3_3:49528304-49528323 None:intergenic 45.0%
CGACGACATAAGAAAGTTCG+AGG + chr3_3:49528304-49528323 Msa0456130:CDS 45.0%
TGGTACTGCAGATTGGGAAA+AGG + chr3_3:49528766-49528785 Msa0456130:CDS 45.0%
TGCAGATTGGGAAAAGGTCA+TGG + chr3_3:49528772-49528791 Msa0456130:CDS 45.0%
TAAAAACAAGAGCCAACCCG+CGG - chr3_3:49528847-49528866 None:intergenic 45.0%
!! AGTGGAAGTGGACTGAAATC+AGG + chr3_3:49528867-49528886 Msa0456130:CDS 45.0%
!! TTGTTGCATTTTAGGGGGGT+TGG + chr3_3:49529733-49529752 Msa0456130:intron 45.0%
CACACGACTAGGGAATAATC+TGG + chr3_3:49529871-49529890 Msa0456130:intron 45.0%
ACACACGGGACCAGAATAAA+GGG + chr3_3:49529910-49529929 Msa0456130:intron 45.0%
AGCGTGATCTCCCTTTATTC+TGG - chr3_3:49529923-49529942 None:intergenic 45.0%
!! TTAGGTTTGTTGCAAGGAGG+GGG + chr3_3:49529954-49529973 Msa0456130:intron 45.0%
! CTTAGGACAAAGTGATGACG+TGG + chr3_3:49530254-49530273 Msa0456130:intron 45.0%
CACCCTTTCAATAACCCCAT+TGG - chr3_3:49531222-49531241 None:intergenic 45.0%
GACATATGACATGGAGGAGT+TGG + chr3_3:49531280-49531299 Msa0456130:intron 45.0%
!!! GGGTTTTGAGGATGTTGGTT+GGG - chr3_3:49531787-49531806 None:intergenic 45.0%
!!! TGGGTTTTGAGGATGTTGGT+TGG - chr3_3:49531788-49531807 None:intergenic 45.0%
!!! GGGTTTTGAGGATGTTGGTT+TGG - chr3_3:49531787-49531806 None:intergenic 45.0%
CTCTTAGGAGTTGTATCCTC+TGG - chr3_3:49532090-49532109 None:intergenic 45.0%
ATGGAACATCCAGTGTTGTC+GGG + chr3_3:49532178-49532197 Msa0456130:intron 45.0%
CCCAATATGCTTCACTTGTC+TGG - chr3_3:49532209-49532228 None:intergenic 45.0%
GTGGAGAATCGAATGAGCAA+TGG - chr3_3:49532257-49532276 None:intergenic 45.0%
TTGGTCGGAAGATGATGTGT+TGG + chr3_3:49532377-49532396 Msa0456130:intron 45.0%
! TGCCATAACGAGGTTGATCA+CGG - chr3_3:49532473-49532492 None:intergenic 45.0%
AGTCAAGTGGGAGGAAATGT+TGG + chr3_3:49532492-49532511 Msa0456130:intron 45.0%
AGATCTCATGAGGACTCTGT+AGG + chr3_3:49532537-49532556 Msa0456130:intron 45.0%
AAAAAGAAAGGCAAGGACGC+TGG + chr3_3:49532606-49532625 Msa0456130:intron 45.0%
!! AACTTGGTGCGTGAACTGTT+TGG + chr3_3:49532828-49532847 Msa0456130:intron 45.0%
AACACTAGGGACTATCACTG+AGG - chr3_3:49532954-49532973 None:intergenic 45.0%
TAGGGGACTAGACAACACTA+GGG - chr3_3:49532967-49532986 None:intergenic 45.0%
AACACTAGGGACTATCACTG+AGG - chr3_3:49532954-49532973 None:intergenic 45.0%
!! TTAGTAATGGGCACACAGTG+AGG - chr3_3:49533231-49533250 None:intergenic 45.0%
!! CAGTGGTGGACAGTTAGTAA+TGG - chr3_3:49533244-49533263 None:intergenic 45.0%
AATGGGCAAATAGTGTGTGG+TGG - chr3_3:49533268-49533287 None:intergenic 45.0%
!!! AGCATCACGTTTTGGGAAGT+AGG - chr3_3:49533678-49533697 None:intergenic 45.0%
! GTGTCTTCAGCATCACGTTT+TGG - chr3_3:49533686-49533705 None:intergenic 45.0%
AAAGGTCTCCAACGATTCGA+AGG - chr3_3:49533910-49533929 None:intergenic 45.0%
GTTGATGCCACCAACAAAGA+AGG + chr3_3:49533959-49533978 Msa0456130:intron 45.0%
!! GGAGTATTGACTGTATGCAC+TGG + chr3_3:49534218-49534237 Msa0456130:intron 45.0%
CATGGGAAGGTCAATTTACC+AGG + chr3_3:49534263-49534282 Msa0456130:intron 45.0%
TGGGAAGGTCAATTTACCAG+GGG + chr3_3:49534265-49534284 Msa0456130:intron 45.0%
TCAATTTACCAGGGGGGATA+AGG + chr3_3:49534273-49534292 Msa0456130:intron 45.0%
CAATTTACCAGGGGGGATAA+GGG + chr3_3:49534274-49534293 Msa0456130:intron 45.0%
CCACCACAGTTATTCTTGAC+CGG + chr3_3:49534299-49534318 Msa0456130:intron 45.0%
TGACCGGTCAAGAATAACTG+TGG - chr3_3:49534305-49534324 None:intergenic 45.0%
CATCATCAAACACTGGTGAC+CGG - chr3_3:49534321-49534340 None:intergenic 45.0%
!! GTCACCAGTGTTTGATGATG+TGG + chr3_3:49534321-49534340 Msa0456130:intron 45.0%
! AAGGACATCGAACGTGCTTT+TGG + chr3_3:49534506-49534525 Msa0456130:intron 45.0%
CTTGTGGGACATAACCGATT+TGG + chr3_3:49534571-49534590 Msa0456130:intron 45.0%
!! CCGATTTGGGTATCAACATG+AGG + chr3_3:49534585-49534604 Msa0456130:intron 45.0%
!! GACCGATTTTGAGCAATCTG+AGG + chr3_3:49534670-49534689 Msa0456130:intron 45.0%
TTTGAGCAATCTGAGGGAAG+TGG + chr3_3:49534677-49534696 Msa0456130:intron 45.0%
TGCAAAAGTGGGTAACACCT+CGG - chr3_3:49534729-49534748 None:intergenic 45.0%
CAGATCCAGTGAAGCACATA+TGG + chr3_3:49534807-49534826 Msa0456130:intron 45.0%
!! GGGTGTTGAATGAAAACCCT+TGG + chr3_3:49535121-49535140 Msa0456130:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr3_3:49535874-49535893 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr3_3:49535874-49535893 Msa0456130:intron 45.0%
! GGTCGACCAAAAGCTTTTCT+TGG - chr3_3:49535944-49535963 None:intergenic 45.0%
ACTCTTTCATCCATGGCTAG+AGG + chr3_3:49536759-49536778 Msa0456130:intron 45.0%
GATAGAACTTCCTCTAGCCA+TGG - chr3_3:49536772-49536791 None:intergenic 45.0%
AGACTCCTGATGGCACTAAA+TGG + chr3_3:49537184-49537203 Msa0456130:CDS 45.0%
TGTGTTTGAGGAGAAACGGA+AGG - chr3_3:49537489-49537508 None:intergenic 45.0%
! AGAAAGTCCGAGGTTTGGTT+TGG + chr3_3:49537511-49537530 Msa0456130:intron 45.0%
CTGGTAGAACATACTCTGGT+AGG + chr3_3:49537788-49537807 Msa0456130:intron 45.0%
! TGATGCTGCTGATTGGGAAA+AGG + chr3_3:49537943-49537962 Msa0456130:CDS 45.0%
CGTTCTTATGAGGGCAGAAA+TGG + chr3_3:49537987-49538006 Msa0456130:CDS 45.0%
!!! TATTTTTTATATTATTTTGA+AGG - chr3_3:49535581-49535600 None:intergenic 5.0%
!!! ATTTTACTTATATTTAAAAA+CGG - chr3_3:49536392-49536411 None:intergenic 5.0%
GGCTTAATCGGAAGAAGGCT+AGG + chr3_3:49528257-49528276 Msa0456130:CDS 50.0%
ATCGGAAGAAGGCTAGGCAA+AGG + chr3_3:49528263-49528282 Msa0456130:CDS 50.0%
!!! ATATGACCGTCGCTTTTCCG+CGG + chr3_3:49528827-49528846 Msa0456130:CDS 50.0%
CTGAACACGGTGATTGCATG+TGG + chr3_3:49529830-49529849 Msa0456130:intron 50.0%
GACACACGGGACCAGAATAA+AGG + chr3_3:49529909-49529928 Msa0456130:intron 50.0%
GTCTTGAAGCGAGTGAAGAG+CGG + chr3_3:49530102-49530121 Msa0456130:intron 50.0%
TCTTGAAGCGAGTGAAGAGC+GGG + chr3_3:49530103-49530122 Msa0456130:intron 50.0%
TTAAGCTTGCCATGGCGAGT+TGG - chr3_3:49530136-49530155 None:intergenic 50.0%
! CACTCGCTTTAAGCTTGCCA+TGG - chr3_3:49530144-49530163 None:intergenic 50.0%
AGAGCGAGAAAACTCCAGAG+AGG + chr3_3:49530165-49530184 Msa0456130:intron 50.0%
ATCCTCGCCACAGCGAATTA+AGG + chr3_3:49530228-49530247 Msa0456130:intron 50.0%
TAAGCCGCCTTAATTCGCTG+TGG - chr3_3:49530238-49530257 None:intergenic 50.0%
ACAGCGAATTAAGGCGGCTT+AGG + chr3_3:49530237-49530256 Msa0456130:intron 50.0%
GTGGTTGGGAAGATTAGGAC+AGG + chr3_3:49531437-49531456 Msa0456130:intron 50.0%
GTTGGGAAGATTAGGACAGG+TGG + chr3_3:49531440-49531459 Msa0456130:intron 50.0%
CAGTGTTCCATGATGGTTGC+TGG - chr3_3:49532122-49532141 None:intergenic 50.0%
CAGCATGCAATGACATCACG+TGG - chr3_3:49532276-49532295 None:intergenic 50.0%
! GCTTGCTTGCTGATGCTTAG+CGG - chr3_3:49532355-49532374 None:intergenic 50.0%
GCTAAGCATCAGCAAGCAAG+CGG + chr3_3:49532354-49532373 Msa0456130:intron 50.0%
CTCCGTGATCAACCTCGTTA+TGG + chr3_3:49532468-49532487 Msa0456130:intron 50.0%
ACCTCGTTATGGCAGTCAAG+TGG + chr3_3:49532479-49532498 Msa0456130:intron 50.0%
CCTCGTTATGGCAGTCAAGT+GGG + chr3_3:49532480-49532499 Msa0456130:intron 50.0%
!! GTGGGAGGAAATGTTGGCTT+AGG + chr3_3:49532498-49532517 Msa0456130:intron 50.0%
AGGATCTAGTGCTCGTCCAA+TGG + chr3_3:49532557-49532576 Msa0456130:intron 50.0%
GGATCTAGTGCTCGTCCAAT+GGG + chr3_3:49532558-49532577 Msa0456130:intron 50.0%
TAGTGCTCGTCCAATGGGTA+GGG + chr3_3:49532563-49532582 Msa0456130:intron 50.0%
CCTGTCATCGAGATGCTCTT+CGG - chr3_3:49532790-49532809 None:intergenic 50.0%
CTAGGGGACTAGACAACACT+AGG - chr3_3:49532968-49532987 None:intergenic 50.0%
CGGGGAACTAGACAACACTA+GGG - chr3_3:49533038-49533057 None:intergenic 50.0%
ACGGGGAACTAGACAACACT+AGG - chr3_3:49533039-49533058 None:intergenic 50.0%
!! CTAGAGGAAGGTAGTGGATC+AGG + chr3_3:49533743-49533762 Msa0456130:intron 50.0%
!! GAAGGTAGTGGATCAGGTAG+TGG + chr3_3:49533749-49533768 Msa0456130:intron 50.0%
CACGCTTTCCTTCGAATCGT+TGG + chr3_3:49533899-49533918 Msa0456130:intron 50.0%
!! GTTGGTGGCATCAACTTGCT+GGG - chr3_3:49533954-49533973 None:intergenic 50.0%
!! TGTTGGTGGCATCAACTTGC+TGG - chr3_3:49533955-49533974 None:intergenic 50.0%
CCTTGTAGGTCATCTTGGGT+TGG - chr3_3:49534154-49534173 None:intergenic 50.0%
CCAACCCAAGATGACCTACA+AGG + chr3_3:49534151-49534170 Msa0456130:intron 50.0%
CAATACTCCCGATCATCCCT+GGG - chr3_3:49534207-49534226 None:intergenic 50.0%
TCAATACTCCCGATCATCCC+TGG - chr3_3:49534208-49534227 None:intergenic 50.0%
TTGACTGTATGCACTGGGAG+TGG + chr3_3:49534224-49534243 Msa0456130:intron 50.0%
GGGAAGGTCAATTTACCAGG+GGG + chr3_3:49534266-49534285 Msa0456130:intron 50.0%
GGAAGGTCAATTTACCAGGG+GGG + chr3_3:49534267-49534286 Msa0456130:intron 50.0%
CCGGTCAAGAATAACTGTGG+TGG - chr3_3:49534302-49534321 None:intergenic 50.0%
TGGAACAGGGAAAGACTCCA+AGG + chr3_3:49534341-49534360 Msa0456130:intron 50.0%
GGAACAGGGAAAGACTCCAA+GGG + chr3_3:49534342-49534361 Msa0456130:intron 50.0%
ACATCAAGAGGGATGTCGGA+AGG + chr3_3:49534487-49534506 Msa0456130:intron 50.0%
! TCCTGAGCTCTAGCATCCTT+TGG - chr3_3:49537707-49537726 None:intergenic 50.0%
! TGCTGATTGGGAAAAGGTCG+TGG + chr3_3:49537949-49537968 Msa0456130:CDS 50.0%
TGCAAACAGTGACCAACCTG+CGG - chr3_3:49538024-49538043 None:intergenic 50.0%
CTCTCTTGGACATGGCTGCT+TGG + chr3_3:49528081-49528100 Msa0456130:CDS 55.0%
TCTTGGACATGGCTGCTTGG+TGG + chr3_3:49528084-49528103 Msa0456130:CDS 55.0%
! TCCTGAGCTCTAGCATCCTG+TGG - chr3_3:49528523-49528542 None:intergenic 55.0%
!!! TATGACCGTCGCTTTTCCGC+GGG + chr3_3:49528828-49528847 Msa0456130:CDS 55.0%
TTTGGGTCGCTCACACGACT+AGG + chr3_3:49529860-49529879 Msa0456130:intron 55.0%
TTGGGTCGCTCACACGACTA+GGG + chr3_3:49529861-49529880 Msa0456130:intron 55.0%
GGCGAGGATGTTGCTCATTG+TGG - chr3_3:49530217-49530236 None:intergenic 55.0%
CTCGCCACAGCGAATTAAGG+CGG + chr3_3:49530231-49530250 Msa0456130:intron 55.0%
ATGACGTGGCAGAAACCCAC+TGG + chr3_3:49530268-49530287 Msa0456130:intron 55.0%
GCTGAGTTTCCTTCGCCAGT+GGG - chr3_3:49530286-49530305 None:intergenic 55.0%
AGCTGAGTTTCCTTCGCCAG+TGG - chr3_3:49530287-49530306 None:intergenic 55.0%
ACGCGGAGAGAGAAAGTGGT+TGG + chr3_3:49531422-49531441 Msa0456130:intron 55.0%
CGCGGAGAGAGAAAGTGGTT+GGG + chr3_3:49531423-49531442 Msa0456130:intron 55.0%
! GACAGGTGGCGCGTTTTTAC+TGG + chr3_3:49531454-49531473 Msa0456130:intron 55.0%
CTGGTTTCTCCCGACAACAC+TGG - chr3_3:49532190-49532209 None:intergenic 55.0%
AGCATCAGCAAGCAAGCGGT+TGG + chr3_3:49532358-49532377 Msa0456130:intron 55.0%
TCAGCAAGCAAGCGGTTGGT+CGG + chr3_3:49532362-49532381 Msa0456130:intron 55.0%
CCCACTTGACTGCCATAACG+AGG - chr3_3:49532483-49532502 None:intergenic 55.0%
CGTTATGGCAGTCAAGTGGG+AGG + chr3_3:49532483-49532502 Msa0456130:intron 55.0%
CTAGTGCTCGTCCAATGGGT+AGG + chr3_3:49532562-49532581 Msa0456130:intron 55.0%
TTAGCTGCCTCCCTACCCAT+TGG - chr3_3:49532576-49532595 None:intergenic 55.0%
! TGGCTTGGAGGAGGTGGAAA+AGG + chr3_3:49532626-49532645 Msa0456130:intron 55.0%
TGGAGGAGGTGGAAAAGGAG+TGG + chr3_3:49532631-49532650 Msa0456130:intron 55.0%
GGAGGAGGTGGAAAAGGAGT+GGG + chr3_3:49532632-49532651 Msa0456130:intron 55.0%
!! CCGAAGAGCATCTCGATGAC+AGG + chr3_3:49532787-49532806 Msa0456130:intron 55.0%
GTTATGTCCCACAAGCGAGC+TGG - chr3_3:49534566-49534585 None:intergenic 55.0%
ACCTCGGTCGAGTATGGTTG+CGG - chr3_3:49534713-49534732 None:intergenic 55.0%
GGTAACACCTCGGTCGAGTA+TGG - chr3_3:49534719-49534738 None:intergenic 55.0%
CTCTCTTGGACATGGCTGCT+TGG + chr3_3:49528081-49528100 Msa0456130:CDS 55.0%
TCTTGGACATGGCTGCTTGG+TGG + chr3_3:49528084-49528103 Msa0456130:CDS 55.0%
GCCAAAGGATGCTAGAGCTC+AGG + chr3_3:49537703-49537722 Msa0456130:CDS 55.0%
ACAGTGACCAACCTGCGGAA+AGG - chr3_3:49538019-49538038 None:intergenic 55.0%
GCCACAGGATGCTAGAGCTC+AGG + chr3_3:49528519-49528538 Msa0456130:CDS 60.0%
GTTGCAAGGAGGGGGAGTTG+CGG + chr3_3:49529962-49529981 Msa0456130:intron 60.0%
GGTGAAGAGCCAACTCGCCA+TGG + chr3_3:49530124-49530143 Msa0456130:intron 60.0%
CGCCTTAATTCGCTGTGGCG+AGG - chr3_3:49530233-49530252 None:intergenic 60.0%
TGGCAGAAACCCACTGGCGA+AGG + chr3_3:49530274-49530293 Msa0456130:intron 60.0%
TCCTGCACAGCTGAGACACG+CGG + chr3_3:49531329-49531348 Msa0456130:intron 60.0%
TGACCTGTGACGTGCCCTGT+CGG - chr3_3:49531397-49531416 None:intergenic 60.0%
ACAGGGCACGTCACAGGTCA+GGG + chr3_3:49531397-49531416 Msa0456130:intron 60.0%
GGGAACGCGGAGAGAGAAAG+TGG + chr3_3:49531418-49531437 Msa0456130:intron 60.0%
! GGTGGCGCGTTTTTACTGGC+TGG + chr3_3:49531458-49531477 Msa0456130:intron 60.0%
!! GCGCGTTTTTACTGGCTGGC+AGG + chr3_3:49531462-49531481 Msa0456130:intron 60.0%
TGCTCGTCCAATGGGTAGGG+AGG + chr3_3:49532566-49532585 Msa0456130:intron 60.0%
! GAAAGGCAAGGACGCTGGCT+TGG + chr3_3:49532611-49532630 Msa0456130:intron 60.0%
AGTGAAATGCGGGGGTTCCC+AGG + chr3_3:49534187-49534206 Msa0456130:intron 60.0%
GTGAAATGCGGGGGTTCCCA+GGG + chr3_3:49534188-49534207 Msa0456130:intron 60.0%
TCCGTGAACCAGCTCGCTTG+TGG + chr3_3:49534555-49534574 Msa0456130:intron 60.0%
! CCCACAAGCGAGCTGGTTCA+CGG - chr3_3:49534559-49534578 None:intergenic 60.0%
CCGTGAACCAGCTCGCTTGT+GGG + chr3_3:49534556-49534575 Msa0456130:intron 60.0%
ACCGCAACCATACTCGACCG+AGG + chr3_3:49534709-49534728 Msa0456130:intron 60.0%
AATGGTCGTCGCCTTTCCGC+AGG + chr3_3:49538005-49538024 Msa0456130:CDS 60.0%
!!! ACCGTCGCTTTTCCGCGGGT+TGG + chr3_3:49528832-49528851 Msa0456130:CDS 65.0%
GCCAACCCGCGGAAAAGCGA+CGG - chr3_3:49528836-49528855 None:intergenic 65.0%
! GTGCGTTACACGCGCCGACA+GGG + chr3_3:49531380-49531399 Msa0456130:intron 65.0%
GACAGGGCACGTCACAGGTC+AGG + chr3_3:49531396-49531415 Msa0456130:intron 65.0%
CAGGGCACGTCACAGGTCAG+GGG + chr3_3:49531398-49531417 Msa0456130:intron 65.0%
CGTCACAGGTCAGGGGAACG+CGG + chr3_3:49531405-49531424 Msa0456130:intron 65.0%
!! AGGCAAGGACGCTGGCTTGG+AGG + chr3_3:49532614-49532633 Msa0456130:intron 65.0%
!! CAAGGACGCTGGCTTGGAGG+AGG + chr3_3:49532617-49532636 Msa0456130:intron 65.0%
CGGGGGTTCCCAGGGATGAT+CGG + chr3_3:49534196-49534215 Msa0456130:intron 65.0%
GGGGGTTCCCAGGGATGATC+GGG + chr3_3:49534197-49534216 Msa0456130:intron 65.0%
GGTGGTTCCCTTATCCCCCC+TGG - chr3_3:49534284-49534303 None:intergenic 65.0%
GTCGTCGCCTTTCCGCAGGT+TGG + chr3_3:49538009-49538028 Msa0456130:CDS 65.0%
GCCGCGTGTCTCAGCTGTGC+AGG - chr3_3:49531333-49531352 None:intergenic 70.0%
! CGTGCGTTACACGCGCCGAC+AGG + chr3_3:49531379-49531398 Msa0456130:intron 70.0%
!! GGACGCTGGCTTGGAGGAGG+TGG + chr3_3:49532620-49532639 Msa0456130:intron 70.0%
! GCGCCGACAGGGCACGTCAC+AGG + chr3_3:49531391-49531410 Msa0456130:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 49527965 49538103 49527965 ID=Msa0456130;Name=Msa0456130
chr3_3 mRNA 49527965 49538103 49527965 ID=Msa0456130-mRNA-1;Parent=Msa0456130;Name=Msa0456130-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.28|0.12|1|0.57|0.25|8|0|484
chr3_3 exon 49527965 49528138 49527965 ID=Msa0456130-mRNA-1:exon:9375;Parent=Msa0456130-mRNA-1
chr3_3 exon 49528157 49528325 49528157 ID=Msa0456130-mRNA-1:exon:9376;Parent=Msa0456130-mRNA-1
chr3_3 exon 49528476 49528621 49528476 ID=Msa0456130-mRNA-1:exon:9377;Parent=Msa0456130-mRNA-1
chr3_3 exon 49528720 49528944 49528720 ID=Msa0456130-mRNA-1:exon:9378;Parent=Msa0456130-mRNA-1
chr3_3 exon 49537123 49537304 49537123 ID=Msa0456130-mRNA-1:exon:9379;Parent=Msa0456130-mRNA-1
chr3_3 exon 49537320 49537522 49537320 ID=Msa0456130-mRNA-1:exon:9380;Parent=Msa0456130-mRNA-1
chr3_3 exon 49537660 49537805 49537660 ID=Msa0456130-mRNA-1:exon:9381;Parent=Msa0456130-mRNA-1
chr3_3 exon 49537897 49538103 49537897 ID=Msa0456130-mRNA-1:exon:9382;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49527965 49528138 49527965 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49528157 49528325 49528157 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49528476 49528621 49528476 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49528720 49528944 49528720 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49537123 49537304 49537123 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49537320 49537522 49537320 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49537660 49537805 49537660 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
chr3_3 CDS 49537897 49538103 49537897 ID=Msa0456130-mRNA-1:cds;Parent=Msa0456130-mRNA-1
Gene Sequence

>Msa0456130

CTATCAAATCCAGTGTTGATAAAGACTACAGATGGCACTAAATGGAAAGTTTATTGGAAAAAAATTAATGGAGAGATTTGGTTTGAAAAGGGTTGGAAATATTTTACTGAAAATTACTCTCTTGGACATGGCTGCTTGGTGGTGTTTGAATATAAAGGAACTTCCAAGTTTGATAATGCACTAGAAATAGATTATTCTTCATGTGACACTGATGATGAAAATGACAATGTTGATCATAGTGAAGATGATGAATCAGTTGAGATTTTGGATGAATGGCTTAATCGGAAGAAGGCTAGGCAAAGGTCACCTTTTGTTTCTCCTCGACGACATAAGAAAGTTCGAGGTGATCATGAGAAGAGTGCTAAAAGAACTTCATCAATAAATTGGCCACAGGATGCTAGAGCTCAGGAAGTAGCTTTAAAATTCATCTCAAGCAATCCTTTTTTCACAATTCTCATAAAGCCTACTCATCTGGTAGAAAATCGGATGTGTGTACCACTTTTAAATGGGGTTATTGAGAACAAGGATAAGAATGTGGTACTGCAGATTGGGAAAAGGTCATGGAATGTGAAATTACTTCGTTGTTATGAGGGCAAATATGACCGTCGCTTTTCCGCGGGTTGGCTCTTGTTTTTAAGTGGAAGTGGACTGAAATCAGGAGATGTCTGTGTCTTTGAACTGATAAACAAGAAAGATTTGGTTTTTAAAGTTCATCAAATACCAAGTAAGTTTACTAGGAGACATGGAGTTCATCTATCAAATCCAGTGTTGATAAAGACTCCTGATGGCACTAAATGGAAAGTTTATTGGAAAAAAATCAATGGAGAGATCTGGTTTGAAAAGGGTTGGAAAACTTTTACTGAAAATTACTCTCTTGGACATGGCTGCTTGGTGGTAACTTCCATGTTTGATGTACACATATTTGACCTGAATGCTGTGGAAATAGCTTATGATTCTTCATGTGACACTAATGATGAAAAAGACAATGTTTATTATAGTGATGATGAATCACTTGAGATTTTAGATGAATGGCTTAATCGGAAGAAGGCTAGACAAAGATCACCTTCCGTTTCTCCTCAAACACATAAGAAAGTCCGAGGTGATCATGATAAGACTAATAAAAGAACTTCATCAATAAATTGGCCAAAGGATGCTAGAGCTCAGGAAGTAGCTCAAAATTTCATCTCAAGCAATCCTTTTTTCACAATTCTCATCAAGCCAATTAATCTGGTAGAACATACTCTGTCTGTACCAGATTTAAAAGGGATTATTGAGAACAAGGAGAAGAATGTGATGCTGCTGATTGGGAAAAGGTCGTGGAATGTGAAATTACTTCGTTCTTATGAGGGCAGAAATGGTCGTCGCCTTTCCGCAGGTTGGTCACTGTTTGCAAGTGAAAGTGGACTGAAATCAGGAGATGTCTGTGTCTTTGAACTGATAAACAAGAAAGAT

Protein sequence

>Msa0456130

LSNPVLIKTTDGTKWKVYWKKINGEIWFEKGWKYFTENYSLGHGCLVVFEYKGTSKFDNALEIDYSSCDTDDENDNVDHSEDDESVEILDEWLNRKKARQRSPFVSPRRHKKVRGDHEKSAKRTSSINWPQDARAQEVALKFISSNPFFTILIKPTHLVENRMCVPLLNGVIENKDKNVVLQIGKRSWNVKLLRCYEGKYDRRFSAGWLLFLSGSGLKSGDVCVFELINKKDLVFKVHQIPSKFTRRHGVHLSNPVLIKTPDGTKWKVYWKKINGEIWFEKGWKTFTENYSLGHGCLVVTSMFDVHIFDLNAVEIAYDSSCDTNDEKDNVYYSDDESLEILDEWLNRKKARQRSPSVSPQTHKKVRGDHDKTNKRTSSINWPKDARAQEVAQNFISSNPFFTILIKPINLVEHTLSVPDLKGIIENKEKNVMLLIGKRSWNVKLLRSYEGRNGRRLSAGWSLFASESGLKSGDVCVFELINKKD