AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0457140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0457140 MtrunA17_Chr3g0104491 92.193 269 17 1 184 448 17 285 6.85e-173 486
Msa0457140 MtrunA17_Chr3g0104501 95.676 185 7 1 1 185 1 184 5.99e-129 371
Msa0457140 MtrunA17_Chr5g0429661 48.551 414 137 16 5 412 11 354 4.28e-109 326
Msa0457140 MtrunA17_Chr3g0117511 42.647 272 113 7 28 283 92 336 4.09e-59 200
Msa0457140 MtrunA17_Chr4g0058991 65.649 131 40 1 132 262 207 332 1.03e-56 194
Msa0457140 MtrunA17_Chr7g0228531 56.204 137 54 3 130 266 216 346 1.08e-48 172
Msa0457140 MtrunA17_Chr7g0228481 52.555 137 59 3 130 266 216 346 5.65e-43 156
Msa0457140 MtrunA17_Chr7g0238631 60.714 112 44 0 123 234 102 213 8.92e-41 153
Msa0457140 MtrunA17_Chr1g0177901 53.279 122 53 1 145 266 5 122 2.02e-40 144
Msa0457140 MtrunA17_Chr7g0228401 32.394 284 139 5 17 266 143 407 2.76e-40 150
Msa0457140 MtrunA17_Chr3g0139671 56.250 112 49 0 123 234 74 185 1.88e-38 148
Msa0457140 MtrunA17_Chr1g0157731 54.464 112 51 0 123 234 80 191 1.83e-37 145
Msa0457140 MtrunA17_Chr7g0233061 50.758 132 60 2 133 264 179 305 3.37e-37 139
Msa0457140 MtrunA17_Chr5g0397841 46.259 147 66 2 95 228 58 204 1.42e-36 140
Msa0457140 MtrunA17_Chr4g0008551 52.941 102 48 0 133 234 37 138 4.71e-34 130
Msa0457140 MtrunA17_Chr4g0053431 50.000 104 52 0 133 236 4 107 1.41e-31 122
Msa0457140 MtrunA17_Chr3g0133601 50.000 102 51 0 133 234 36 137 5.29e-31 119
Msa0457140 MtrunA17_Chr6g0452271 42.857 140 76 3 123 261 3 139 1.57e-30 120
Msa0457140 MtrunA17_Chr5g0401731 48.077 104 54 0 133 236 14 117 1.94e-30 120
Msa0457140 MtrunA17_Chr4g0042501 50.000 112 53 1 134 242 105 216 5.34e-30 120
Msa0457140 MtrunA17_Chr8g0342541 50.485 103 48 2 134 234 14 115 6.14e-30 119
Msa0457140 MtrunA17_Chr1g0193371 44.203 138 71 4 132 267 12 145 9.39e-30 119
Msa0457140 MtrunA17_Chr5g0417621 46.400 125 64 1 121 242 121 245 1.23e-29 120
Msa0457140 MtrunA17_Chr7g0254261 39.634 164 89 2 134 293 89 246 1.43e-29 118
Msa0457140 MtrunA17_Chr1g0193801 36.458 192 94 6 132 299 12 199 1.67e-29 119
Msa0457140 MtrunA17_Chr4g0022901 41.606 137 75 3 120 252 1 136 1.72e-29 116
Msa0457140 MtrunA17_Chr8g0342521 51.456 103 47 2 134 234 14 115 1.78e-29 117
Msa0457140 MtrunA17_Chr6g0480581 51.000 100 49 0 134 233 4 103 2.26e-29 115
Msa0457140 MtrunA17_Chr6g0460661 48.515 101 52 0 134 234 16 116 2.39e-29 112
Msa0457140 MtrunA17_Chr2g0323351 35.981 214 118 7 132 336 12 215 3.25e-29 114
Msa0457140 MtrunA17_Chr2g0281071 43.966 116 64 1 120 234 1 116 6.78e-29 116
Msa0457140 MtrunA17_Chr4g0055981 43.307 127 68 3 134 259 57 180 7.14e-29 113
Msa0457140 MtrunA17_Chr5g0434571 41.379 145 71 4 102 234 9 151 7.69e-29 116
Msa0457140 MtrunA17_Chr5g0397231 48.454 97 49 1 134 229 14 110 9.09e-29 115
Msa0457140 MtrunA17_Chr5g0437321 47.959 98 51 0 133 230 18 115 1.15e-28 114
Msa0457140 MtrunA17_Chr4g0037141 38.690 168 91 5 134 290 14 180 1.18e-28 114
Msa0457140 MtrunA17_Chr3g0125801 50.435 115 54 1 131 242 13 127 1.46e-28 114
Msa0457140 MtrunA17_Chr7g0270891 37.912 182 101 6 132 306 12 188 1.48e-28 115
Msa0457140 MtrunA17_Chr5g0410961 42.241 116 65 2 120 234 1 115 1.56e-28 115
Msa0457140 MtrunA17_Chr4g0048511 44.444 117 62 2 120 234 1 116 1.65e-28 115
Msa0457140 MtrunA17_Chr3g0117091 47.619 105 52 2 132 234 12 115 3.02e-28 114
Msa0457140 MtrunA17_Chr2g0330041 47.573 103 51 2 134 234 14 115 3.10e-28 115
Msa0457140 MtrunA17_Chr8g0342481 49.038 104 49 3 134 234 14 116 4.01e-28 115
Msa0457140 MtrunA17_Chr7g0271241 51.515 99 45 2 132 228 12 109 4.51e-28 114
Msa0457140 MtrunA17_Chr1g0211161 47.619 105 52 2 132 234 13 116 4.82e-28 111
Msa0457140 MtrunA17_Chr6g0454921 44.231 104 58 0 133 236 14 117 6.12e-28 110
Msa0457140 MtrunA17_Chr2g0328771 45.378 119 61 3 132 247 20 137 7.67e-28 112
Msa0457140 MtrunA17_Chr6g0460671 48.039 102 53 0 133 234 98 199 8.02e-28 113
Msa0457140 MtrunA17_Chr2g0309911 45.631 103 53 2 134 234 13 114 8.89e-28 112
Msa0457140 MtrunA17_Chr4g0032401 44.915 118 63 2 132 247 17 134 1.01e-27 112
Msa0457140 MtrunA17_Chr4g0022931 42.735 117 64 2 120 234 1 116 1.08e-27 111
Msa0457140 MtrunA17_Chr3g0088461 42.735 117 66 1 119 234 9 125 1.13e-27 112
Msa0457140 MtrunA17_Chr3g0110351 32.227 211 136 5 120 328 1 206 1.39e-27 112
Msa0457140 MtrunA17_Chr3g0115821 46.154 117 59 3 120 234 1 115 1.57e-27 112
Msa0457140 MtrunA17_Chr4g0058631 45.192 104 56 1 132 234 12 115 1.75e-27 112
Msa0457140 MtrunA17_Chr4g0039971 44.915 118 61 3 119 234 1 116 2.34e-27 112
Msa0457140 MtrunA17_Chr8g0349261 44.444 117 63 1 120 234 1 117 2.72e-27 110
Msa0457140 MtrunA17_Chr8g0385321 44.340 106 57 2 134 237 14 119 2.77e-27 111
Msa0457140 MtrunA17_Chr4g0057031 44.444 117 61 3 120 234 1 115 3.23e-27 110
Msa0457140 MtrunA17_Chr5g0435101 46.602 103 52 2 134 234 13 114 3.48e-27 108
Msa0457140 MtrunA17_Chr4g0022911 41.026 117 66 2 120 234 1 116 3.63e-27 110
Msa0457140 MtrunA17_Chr7g0217741 45.299 117 60 3 120 234 1 115 7.60e-27 109
Msa0457140 MtrunA17_Chr8g0346561 41.353 133 76 2 120 251 1 132 9.84e-27 109
Msa0457140 MtrunA17_Chr3g0131121 36.585 164 79 5 134 294 14 155 1.05e-26 108
Msa0457140 MtrunA17_Chr3g0099131 48.571 105 52 2 132 234 41 145 1.17e-26 112
Msa0457140 MtrunA17_Chr3g0103281 41.912 136 75 3 134 268 14 146 1.27e-26 109
Msa0457140 MtrunA17_Chr8g0387421 43.137 102 57 1 134 234 14 115 1.44e-26 109
Msa0457140 MtrunA17_Chr4g0044421 41.228 114 66 1 122 234 2 115 1.86e-26 105
Msa0457140 MtrunA17_Chr4g0042671 42.017 119 67 2 120 237 1 118 2.16e-26 110
Msa0457140 MtrunA17_Chr7g0228891 43.590 117 62 3 120 234 1 115 2.35e-26 107
Msa0457140 MtrunA17_Chr2g0323411 43.966 116 63 2 120 234 1 115 3.66e-26 108
Msa0457140 MtrunA17_Chr1g0167661 35.859 198 98 7 132 317 12 192 5.92e-26 105
Msa0457140 MtrunA17_Chr5g0395281 44.762 105 55 2 132 234 12 115 8.25e-26 106
Msa0457140 MtrunA17_Chr4g0030881 43.860 114 56 2 134 239 9 122 8.37e-26 105
Msa0457140 MtrunA17_Chr3g0080861 48.571 105 50 3 132 233 37 140 1.11e-25 109
Msa0457140 MtrunA17_Chr7g0240821 36.585 164 93 5 137 298 6 160 1.33e-25 104
Msa0457140 MtrunA17_Chr1g0186061 46.429 112 52 3 134 243 22 127 2.10e-25 104
Msa0457140 MtrunA17_Chr4g0013361 50.000 102 49 2 134 233 12 113 2.20e-25 105
Msa0457140 MtrunA17_Chr4g0070611 44.144 111 60 2 120 229 1 110 2.71e-25 105
Msa0457140 MtrunA17_Chr8g0354661 46.226 106 54 2 132 235 37 141 2.82e-25 108
Msa0457140 MtrunA17_Chr5g0417821 41.818 110 63 1 129 237 4 113 4.74e-25 104
Msa0457140 MtrunA17_Chr8g0343831 48.148 108 50 2 122 228 3 105 5.27e-25 103
Msa0457140 MtrunA17_Chr7g0261281 40.288 139 70 4 120 247 1 137 6.61e-25 103
Msa0457140 MtrunA17_Chr1g0154031 46.667 105 53 2 132 234 76 179 7.05e-25 106
Msa0457140 MtrunA17_Chr4g0070641 44.545 110 59 2 120 228 1 109 9.14e-25 100
Msa0457140 MtrunA17_Chr7g0275911 44.144 111 60 2 120 229 1 110 9.38e-25 102
Msa0457140 MtrunA17_Chr2g0327821 43.103 116 63 2 134 247 8 122 1.01e-24 102
Msa0457140 MtrunA17_Chr1g0168661 42.400 125 64 3 134 256 23 141 1.09e-24 102
Msa0457140 MtrunA17_Chr1g0203411 45.133 113 58 3 134 243 14 125 1.27e-24 103
Msa0457140 MtrunA17_Chr6g0453471 42.241 116 65 2 120 234 1 115 2.05e-24 103
Msa0457140 MtrunA17_Chr8g0334881 49.020 102 50 2 134 233 12 113 2.65e-24 102
Msa0457140 MtrunA17_Chr1g0192411 44.860 107 58 1 129 234 9 115 4.51e-24 103
Msa0457140 MtrunA17_Chr1g0180391 47.959 98 48 2 132 227 19 115 5.59e-24 99.8
Msa0457140 MtrunA17_Chr7g0233151 50.000 96 41 2 184 278 1 90 5.89e-24 98.2
Msa0457140 MtrunA17_Chr7g0274581 31.373 204 114 5 134 328 14 200 6.16e-24 99.0
Msa0457140 MtrunA17_Chr4g0068061 42.735 117 63 3 120 234 1 115 7.12e-24 102
Msa0457140 MtrunA17_Chr4g0060721 36.090 133 84 1 123 254 4 136 9.11e-24 101
Msa0457140 MtrunA17_Chr5g0434931 42.453 106 60 1 134 238 37 142 1.03e-23 100
Msa0457140 MtrunA17_Chr3g0121241 43.269 104 58 1 127 229 37 140 1.98e-23 100
Msa0457140 MtrunA17_Chr1g0209661 41.346 104 60 1 132 234 27 130 2.40e-23 100
Msa0457140 MtrunA17_Chr7g0228991 45.361 97 52 1 134 229 31 127 2.67e-23 99.0
Msa0457140 MtrunA17_Chr5g0434911 40.000 115 68 1 125 238 14 128 3.21e-23 99.0
Msa0457140 MtrunA17_Chr7g0228231 40.179 112 66 1 134 244 16 127 4.24e-23 96.7
Msa0457140 MtrunA17_Chr5g0441141 45.631 103 52 3 134 233 14 115 4.90e-23 98.2
Msa0457140 MtrunA17_Chr7g0217221 39.516 124 69 2 123 245 3 121 5.17e-23 98.2
Msa0457140 MtrunA17_Chr5g0440761 45.631 103 52 3 134 233 14 115 5.55e-23 97.8
Msa0457140 MtrunA17_Chr5g0440781 45.631 103 52 3 134 233 14 115 6.04e-23 95.9
Msa0457140 MtrunA17_Chr1g0187761 37.405 131 79 2 123 251 3 132 6.57e-23 97.4
Msa0457140 MtrunA17_Chr6g0470971 31.443 194 129 3 124 315 6 197 7.82e-23 97.8
Msa0457140 MtrunA17_Chr7g0220341 43.269 104 56 1 129 229 22 125 1.35e-22 97.1
Msa0457140 MtrunA17_Chr5g0421201 39.041 146 67 4 186 322 12 144 1.36e-22 94.7
Msa0457140 MtrunA17_Chr1g0203441 40.952 105 61 1 134 237 15 119 1.56e-22 96.7
Msa0457140 MtrunA17_Chr5g0400821 31.937 191 117 5 120 299 1 189 2.01e-22 97.4
Msa0457140 MtrunA17_Chr3g0092401 38.938 113 68 1 123 234 4 116 2.15e-22 97.4
Msa0457140 MtrunA17_Chr5g0441131 43.636 110 58 3 128 234 5 113 2.35e-22 94.0
Msa0457140 MtrunA17_Chr2g0327351 41.964 112 62 3 120 229 1 111 3.60e-22 96.7
Msa0457140 MtrunA17_Chr4g0022881 41.837 98 54 2 134 229 14 110 3.93e-22 94.7
Msa0457140 MtrunA17_Chr4g0022891 37.288 118 70 3 134 249 14 129 4.17e-22 94.7
Msa0457140 MtrunA17_Chr6g0450101 46.875 96 48 2 134 227 16 110 6.50e-22 93.6
Msa0457140 MtrunA17_Chr1g0152011 39.231 130 74 4 120 245 1 129 8.20e-22 96.3
Msa0457140 MtrunA17_Chr1g0167691 42.857 105 57 2 132 234 12 115 8.46e-22 94.4
Msa0457140 MtrunA17_Chr6g0453211 40.187 107 63 1 123 228 3 109 8.81e-22 95.5
Msa0457140 MtrunA17_Chr7g0247131 50.000 78 37 1 159 234 4 81 9.04e-22 94.7
Msa0457140 MtrunA17_Chr4g0054391 38.281 128 76 3 120 245 1 127 1.02e-21 95.1
Msa0457140 MtrunA17_Chr4g0046181 66.102 59 20 0 132 190 219 277 1.08e-21 94.7
Msa0457140 MtrunA17_Chr4g0028311 40.171 117 67 3 120 234 1 116 1.41e-21 95.1
Msa0457140 MtrunA17_Chr5g0434841 41.346 104 60 1 132 234 20 123 2.08e-21 94.7
Msa0457140 MtrunA17_Chr5g0434831 42.308 104 59 1 132 234 7 110 2.10e-21 91.7
Msa0457140 MtrunA17_Chr5g0416341 41.837 98 57 0 137 234 29 126 2.61e-21 96.3
Msa0457140 MtrunA17_Chr2g0311221 40.909 110 63 2 121 229 4 112 2.71e-21 94.4
Msa0457140 MtrunA17_Chr3g0135311 39.370 127 73 4 120 244 1 125 2.98e-21 94.7
Msa0457140 MtrunA17_Chr2g0322521 50.000 106 49 3 132 234 29 133 3.19e-21 95.1
Msa0457140 MtrunA17_Chr1g0194301 34.028 144 89 3 134 275 35 174 3.67e-21 93.2
Msa0457140 MtrunA17_Chr1g0194951 43.590 117 62 3 120 234 1 115 5.37e-21 94.4
Msa0457140 MtrunA17_Chr7g0254411 37.168 113 70 1 123 234 3 115 5.91e-21 93.6
Msa0457140 MtrunA17_Chr1g0151941 38.835 103 61 2 134 234 14 116 7.51e-21 91.7
Msa0457140 MtrunA17_Chr7g0238651 31.892 185 114 4 134 312 7 185 2.26e-20 92.0
Msa0457140 MtrunA17_Chr8g0360111 42.268 97 55 1 134 229 27 123 2.86e-20 90.1
Msa0457140 MtrunA17_Chr8g0362231 38.776 98 60 0 137 234 25 122 3.32e-20 92.4
Msa0457140 MtrunA17_Chr7g0264641 36.735 147 82 6 120 260 1 142 4.25e-20 89.7
Msa0457140 MtrunA17_Chr7g0233161 69.811 53 16 0 133 185 298 350 1.69e-19 89.7
Msa0457140 MtrunA17_Chr1g0194291 39.252 107 64 1 134 239 23 129 3.33e-19 87.0
Msa0457140 MtrunA17_Chr4g0072751 40.179 112 64 3 120 229 1 111 3.84e-19 88.6
Msa0457140 MtrunA17_Chr2g0293911 41.414 99 57 1 130 227 22 120 2.71e-18 85.5
Msa0457140 MtrunA17_Chr3g0099141 44.578 83 45 1 131 212 39 121 3.55e-18 80.9
Msa0457140 MtrunA17_Chr2g0323321 43.902 82 43 2 132 211 11 91 7.39e-18 79.3
Msa0457140 MtrunA17_Chr7g0269831 44.444 117 61 3 120 234 1 115 7.90e-18 84.7
Msa0457140 MtrunA17_Chr6g0487491 35.200 125 70 4 120 234 1 124 9.93e-18 82.8
Msa0457140 MtrunA17_Chr4g0068921 41.414 99 57 1 130 227 22 120 1.05e-17 81.3
Msa0457140 MtrunA17_Chr8g0342531 46.835 79 39 2 134 210 14 91 1.05e-17 80.5
Msa0457140 MtrunA17_Chr4g0042611 41.573 89 50 2 120 207 1 88 1.27e-17 77.8
Msa0457140 MtrunA17_Chr8g0342461 47.436 78 37 3 134 208 14 90 3.29e-17 78.2
Msa0457140 MtrunA17_Chr8g0342471 46.154 78 38 3 134 208 14 90 1.16e-16 76.6
Msa0457140 MtrunA17_Chr5g0434901 46.970 66 35 0 167 232 9 74 1.98e-16 75.5
Msa0457140 MtrunA17_Chr8g0342511 46.667 75 37 2 134 206 14 87 2.04e-16 74.7
Msa0457140 MtrunA17_Chr7g0229101 45.455 66 36 0 167 232 8 73 1.75e-15 75.1
Msa0457140 MtrunA17_Chr3g0093811 40.000 95 54 2 167 261 18 109 2.92e-15 75.9
Msa0457140 MtrunA17_Chr5g0395221 39.744 78 46 1 131 207 11 88 5.65e-15 70.1
Msa0457140 MtrunA17_Chr2g0294811 41.758 91 47 3 120 207 1 88 1.21e-14 70.5
Msa0457140 MtrunA17_Chr7g0229131 41.791 67 39 0 167 233 8 74 6.36e-14 69.7
Msa0457140 MtrunA17_Chr5g0425591 42.045 88 47 3 128 212 5 91 1.53e-13 66.2
Msa0457140 MtrunA17_Chr6g0453751 40.659 91 44 4 132 212 20 110 2.76e-13 66.6
Msa0457140 MtrunA17_Chr6g0483051 37.113 97 60 1 131 227 66 161 4.44e-13 71.2
Msa0457140 MtrunA17_Chr6g0483051 36.275 102 64 1 126 227 112 212 1.70e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0457140 AT5G11050.1 38.731 457 186 13 23 445 16 412 7.75e-82 259
Msa0457140 AT5G58850.1 37.856 457 202 13 23 445 11 419 7.67e-78 249
Msa0457140 AT4G18770.1 66.667 138 41 1 125 262 208 340 2.83e-59 200
Msa0457140 AT3G27785.1 60.135 148 46 2 122 263 177 317 8.23e-54 186
Msa0457140 AT5G40360.1 54.615 130 56 1 134 263 158 284 5.61e-47 166
Msa0457140 AT5G02320.3 60.714 112 44 0 123 234 56 167 1.19e-40 152
Msa0457140 AT5G02320.1 60.909 110 43 0 125 234 118 227 1.29e-40 152
Msa0457140 AT5G02320.2 60.909 110 43 0 125 234 118 227 1.29e-40 152
Msa0457140 AT3G09370.2 47.826 161 79 1 125 285 126 281 1.45e-40 152
Msa0457140 AT3G09370.3 47.853 163 80 1 123 285 132 289 1.45e-40 152
Msa0457140 AT3G09370.1 47.826 161 79 1 125 285 121 276 1.89e-40 151
Msa0457140 AT2G25230.1 46.667 150 72 3 115 263 8 150 2.64e-38 139
Msa0457140 AT5G11510.5 52.679 112 53 0 123 234 70 181 8.37e-37 144
Msa0457140 AT5G11510.3 52.679 112 53 0 123 234 70 181 8.68e-37 144
Msa0457140 AT5G11510.1 52.679 112 53 0 123 234 70 181 8.68e-37 144
Msa0457140 AT5G11510.4 52.679 112 53 0 123 234 70 181 8.68e-37 144
Msa0457140 AT5G11510.2 52.679 112 53 0 123 234 70 181 9.17e-37 144
Msa0457140 AT4G32730.5 51.786 112 54 0 123 234 76 187 6.84e-36 141
Msa0457140 AT4G32730.4 51.786 112 54 0 123 234 76 187 6.84e-36 141
Msa0457140 AT4G32730.3 51.786 112 54 0 123 234 76 187 6.84e-36 141
Msa0457140 AT4G32730.2 51.786 112 54 0 123 234 76 187 6.84e-36 141
Msa0457140 AT4G32730.1 51.786 112 54 0 123 234 76 187 8.67e-36 140
Msa0457140 AT5G40430.1 44.604 139 71 3 125 263 45 177 9.91e-35 130
Msa0457140 AT3G28470.1 37.981 208 117 6 123 322 3 206 1.55e-32 126
Msa0457140 AT3G55730.1 53.846 104 48 0 131 234 53 156 2.81e-32 127
Msa0457140 AT4G00540.2 55.357 112 47 1 126 234 95 206 7.17e-31 123
Msa0457140 AT1G17950.1 35.829 187 112 3 134 318 5 185 9.55e-31 119
Msa0457140 AT1G69560.2 43.885 139 75 1 115 250 104 242 1.20e-30 121
Msa0457140 AT1G69560.1 43.885 139 75 1 115 250 88 226 1.48e-30 120
Msa0457140 AT4G00540.1 55.357 112 47 1 126 234 93 204 1.92e-30 122
Msa0457140 AT3G09230.1 50.980 102 50 0 133 234 54 155 5.16e-30 120
Msa0457140 AT1G09540.1 37.356 174 105 3 132 303 12 183 5.47e-30 120
Msa0457140 AT1G26780.2 31.034 261 150 5 132 389 96 329 1.35e-29 119
Msa0457140 AT5G26660.1 48.276 116 56 3 132 245 12 125 1.82e-29 118
Msa0457140 AT1G66230.1 37.438 203 118 7 120 318 1 198 3.37e-29 115
Msa0457140 AT3G50060.1 46.154 104 56 0 133 236 5 108 3.96e-29 116
Msa0457140 AT1G57560.1 49.524 105 50 2 132 234 12 115 7.47e-29 115
Msa0457140 AT1G57560.2 49.524 105 50 2 132 234 12 115 7.53e-29 115
Msa0457140 AT1G26780.1 48.246 114 56 1 132 242 96 209 1.00e-28 114
Msa0457140 AT2G39880.1 49.038 104 53 0 131 234 47 150 1.13e-28 116
Msa0457140 AT5G67300.1 47.059 102 54 0 133 234 5 106 1.18e-28 115
Msa0457140 AT3G12720.1 46.602 103 52 2 134 234 24 125 1.65e-28 114
Msa0457140 AT4G37260.1 47.115 104 55 0 133 236 12 115 1.66e-28 115
Msa0457140 AT3G11440.2 43.077 130 66 3 109 236 24 147 1.74e-28 117
Msa0457140 AT4G33450.1 49.074 108 52 1 131 235 16 123 2.49e-28 112
Msa0457140 AT1G63910.1 42.623 122 64 2 134 254 14 130 2.57e-28 115
Msa0457140 AT3G29020.1 43.333 120 68 0 134 253 65 184 3.22e-28 112
Msa0457140 AT1G18570.1 43.750 128 70 2 122 248 3 129 5.18e-28 114
Msa0457140 AT3G13890.2 45.098 102 55 1 134 234 14 115 5.54e-28 114
Msa0457140 AT3G11440.3 43.077 130 66 3 109 236 24 147 6.01e-28 117
Msa0457140 AT3G11440.4 43.077 130 66 3 109 236 24 147 6.01e-28 117
Msa0457140 AT3G11440.1 43.077 130 66 3 109 236 24 147 6.01e-28 117
Msa0457140 AT4G26930.1 42.975 121 57 2 114 233 12 121 6.45e-28 114
Msa0457140 AT4G01680.1 46.154 104 55 1 132 234 12 115 6.68e-28 113
Msa0457140 AT4G28110.1 46.667 105 55 1 134 237 14 118 7.91e-28 112
Msa0457140 AT4G05100.1 43.966 116 64 1 120 234 1 116 8.19e-28 113
Msa0457140 AT4G01680.3 46.154 104 55 1 132 234 12 115 1.18e-27 110
Msa0457140 AT2G23290.1 47.115 104 55 0 133 236 12 115 1.35e-27 112
Msa0457140 AT3G29020.2 43.333 120 68 0 134 253 67 186 1.48e-27 112
Msa0457140 AT4G12350.1 44.444 117 61 3 120 234 1 115 1.59e-27 111
Msa0457140 AT5G35550.1 41.353 133 71 2 113 244 1 127 3.18e-27 110
Msa0457140 AT1G74430.1 40.625 128 74 2 131 257 11 137 3.72e-27 110
Msa0457140 AT3G13890.1 42.342 111 54 2 134 234 14 124 3.81e-27 112
Msa0457140 AT5G14750.1 48.454 97 49 1 134 229 18 114 4.19e-27 108
Msa0457140 AT5G16770.4 43.103 116 64 2 120 234 1 115 4.23e-27 111
Msa0457140 AT5G16770.3 43.103 116 64 2 120 234 1 115 4.23e-27 111
Msa0457140 AT4G21440.1 46.154 104 55 1 132 234 12 115 4.93e-27 111
Msa0457140 AT5G16770.1 43.103 116 64 2 120 234 1 115 5.47e-27 111
Msa0457140 AT5G16770.2 43.103 116 64 2 120 234 1 115 5.47e-27 111
Msa0457140 AT5G06100.1 47.222 108 55 2 131 236 31 138 9.50e-27 112
Msa0457140 AT4G38620.1 46.602 103 52 2 134 234 14 115 1.09e-26 108
Msa0457140 AT4G01680.2 43.103 116 53 2 132 234 12 127 1.23e-26 110
Msa0457140 AT5G17800.1 45.217 115 61 1 134 246 93 207 1.25e-26 109
Msa0457140 AT5G10280.1 44.444 117 61 3 120 234 1 115 1.64e-26 109
Msa0457140 AT3G02940.2 43.103 116 64 2 120 234 1 115 1.95e-26 108
Msa0457140 AT4G22680.1 43.590 117 62 3 120 234 1 115 2.06e-26 107
Msa0457140 AT5G06100.5 47.222 108 55 2 131 236 31 138 2.14e-26 112
Msa0457140 AT5G06100.2 47.222 108 55 2 131 236 31 138 2.14e-26 112
Msa0457140 AT5G06100.3 47.222 108 55 2 131 236 31 138 2.14e-26 112
Msa0457140 AT5G06100.4 47.222 108 55 2 131 236 31 138 2.14e-26 112
Msa0457140 AT5G65230.1 44.444 117 61 3 120 234 1 115 2.68e-26 108
Msa0457140 AT3G61250.1 44.444 117 61 3 120 234 1 115 2.72e-26 108
Msa0457140 AT5G40330.1 32.961 179 98 3 134 311 14 171 2.97e-26 106
Msa0457140 AT5G12870.1 46.078 102 54 1 134 234 20 121 3.03e-26 107
Msa0457140 AT3G02940.1 43.103 116 64 2 120 234 1 115 3.07e-26 108
Msa0457140 AT3G02940.3 43.103 116 64 2 120 234 1 115 3.07e-26 108
Msa0457140 AT5G15310.4 43.103 116 64 2 120 234 1 115 3.38e-26 106
Msa0457140 AT3G08500.1 47.115 104 54 1 132 234 30 133 3.56e-26 108
Msa0457140 AT5G15310.1 43.103 116 64 2 120 234 1 115 4.03e-26 108
Msa0457140 AT5G15310.2 43.103 116 64 2 120 234 1 115 4.48e-26 108
Msa0457140 AT1G73410.1 50.467 107 50 1 134 237 6 112 5.76e-26 106
Msa0457140 AT1G35515.1 34.810 158 94 3 134 282 14 171 6.07e-26 105
Msa0457140 AT2G26960.1 45.192 104 56 1 131 233 19 122 6.55e-26 109
Msa0457140 AT3G53200.1 32.663 199 116 4 131 320 8 197 6.62e-26 105
Msa0457140 AT1G73410.2 50.467 107 50 1 134 237 6 112 7.50e-26 104
Msa0457140 AT1G74080.1 48.485 99 50 1 132 229 12 110 8.09e-26 107
Msa0457140 AT5G55020.1 44.660 103 56 1 132 233 26 128 8.82e-26 110
Msa0457140 AT3G01140.2 43.103 116 64 2 120 234 1 115 9.70e-26 107
Msa0457140 AT4G09460.1 30.769 182 115 3 134 305 14 194 1.28e-25 105
Msa0457140 AT2G32460.2 46.296 108 54 3 132 236 6 112 1.32e-25 109
Msa0457140 AT2G32460.1 47.170 106 52 3 132 234 18 122 1.36e-25 109
Msa0457140 AT3G27920.1 46.392 97 51 1 134 229 16 112 1.87e-25 104
Msa0457140 AT4G17785.2 42.735 117 64 2 120 234 1 116 2.00e-25 107
Msa0457140 AT4G17785.1 42.735 117 64 2 120 234 1 116 2.01e-25 107
Msa0457140 AT1G22640.1 44.660 103 54 2 134 234 14 115 2.18e-25 104
Msa0457140 AT5G16600.1 44.531 128 66 4 120 245 1 125 3.31e-25 105
Msa0457140 AT3G23250.1 33.171 205 118 6 120 321 1 189 3.32e-25 105
Msa0457140 AT3G24310.1 43.200 125 63 3 134 256 20 138 3.43e-25 104
Msa0457140 AT5G54230.1 43.810 105 58 1 134 237 14 118 3.82e-25 105
Msa0457140 AT3G01140.1 45.192 104 56 1 132 234 55 158 3.96e-25 106
Msa0457140 AT3G13540.1 40.833 120 69 2 127 245 18 136 3.98e-25 103
Msa0457140 AT5G56110.1 47.115 104 54 1 134 236 14 117 4.16e-25 105
Msa0457140 AT5G07700.1 41.379 116 66 2 120 234 1 115 5.51e-25 105
Msa0457140 AT5G07700.2 41.379 116 66 2 120 234 1 115 5.51e-25 105
Msa0457140 AT5G07690.1 42.609 115 64 2 120 233 1 114 5.60e-25 105
Msa0457140 AT5G52600.1 33.333 192 109 5 134 323 14 188 5.97e-25 102
Msa0457140 AT5G60890.1 42.742 124 67 2 134 256 14 134 7.03e-25 104
Msa0457140 AT1G06180.1 32.243 214 113 8 120 324 1 191 9.60e-25 102
Msa0457140 AT1G34670.1 41.379 116 66 2 120 234 1 115 1.01e-24 105
Msa0457140 AT5G61420.2 41.379 116 66 2 120 234 1 115 1.58e-24 104
Msa0457140 AT4G34990.1 43.396 106 59 1 134 238 14 119 1.65e-24 102
Msa0457140 AT5G59780.3 42.982 114 60 3 134 245 10 120 2.44e-24 101
Msa0457140 AT3G46130.1 44.444 108 57 2 134 239 11 117 3.04e-24 101
Msa0457140 AT2G26950.1 41.667 108 54 2 131 233 15 118 5.77e-24 103
Msa0457140 AT2G16720.1 42.718 103 56 2 134 234 14 115 5.84e-24 101
Msa0457140 AT3G48920.1 41.322 121 64 2 134 247 20 140 7.32e-24 100
Msa0457140 AT5G62320.1 33.163 196 115 7 121 302 3 196 1.23e-23 99.8
Msa0457140 AT2G47190.1 44.118 102 56 1 134 234 22 123 1.88e-23 99.8
Msa0457140 AT1G18710.1 41.509 106 61 1 134 238 14 119 2.16e-23 99.4
Msa0457140 AT5G62470.1 36.508 126 80 0 123 248 3 128 3.71e-23 100
Msa0457140 AT4G13480.1 42.400 125 64 3 134 256 8 126 3.82e-23 98.6
Msa0457140 AT3G01530.1 35.714 168 93 5 134 294 27 186 4.15e-23 97.1
Msa0457140 AT3G60460.1 48.039 102 51 2 134 233 13 114 5.16e-23 99.4
Msa0457140 AT3G30210.1 41.860 129 63 4 134 251 29 156 5.56e-23 98.6
Msa0457140 AT2G31180.1 39.231 130 75 3 120 247 1 128 5.70e-23 97.8
Msa0457140 AT5G39700.1 44.444 99 55 0 135 233 57 155 9.81e-23 95.5
Msa0457140 AT5G57620.1 41.353 133 72 5 120 247 1 132 1.35e-22 98.6
Msa0457140 AT3G47600.1 38.938 113 68 1 123 234 3 115 1.35e-22 98.6
Msa0457140 AT4G25560.1 44.118 102 56 1 134 234 12 113 1.83e-22 97.4
Msa0457140 AT5G26660.2 50.633 79 38 1 167 245 17 94 2.26e-22 97.8
Msa0457140 AT1G74650.1 39.823 113 67 1 123 234 3 115 2.42e-22 97.8
Msa0457140 AT5G23000.1 41.880 117 65 3 120 234 1 116 3.27e-22 97.4
Msa0457140 AT3G27810.1 37.956 137 76 2 134 269 22 150 4.73e-22 94.7
Msa0457140 AT5G49330.1 41.379 116 66 2 120 234 1 115 7.38e-22 96.7
Msa0457140 AT5G35550.2 48.718 78 40 0 167 244 53 130 8.94e-22 94.7
Msa0457140 AT1G08810.1 34.228 149 96 2 123 269 3 151 1.10e-21 95.1
Msa0457140 AT1G48000.1 34.641 153 91 2 134 285 34 178 1.13e-21 94.0
Msa0457140 AT1G56160.1 40.777 103 58 2 134 234 16 117 1.15e-21 95.1
Msa0457140 AT5G62470.2 36.220 127 80 1 123 248 3 129 1.38e-21 95.9
Msa0457140 AT1G68320.1 31.720 186 116 5 132 310 19 200 1.62e-21 94.7
Msa0457140 AT5G40350.1 45.263 95 51 1 134 227 19 113 1.79e-21 92.8
Msa0457140 AT3G62610.1 41.379 116 66 2 120 234 1 115 1.93e-21 95.5
Msa0457140 AT3G49690.1 41.129 124 68 4 120 239 1 123 2.16e-21 94.7
Msa0457140 AT1G25340.1 44.660 103 54 2 134 234 20 121 2.80e-21 94.0
Msa0457140 AT3G28910.1 42.056 107 61 1 123 228 3 109 3.51e-21 94.4
Msa0457140 AT1G79180.1 37.097 124 69 3 113 234 1 117 4.58e-21 93.6
Msa0457140 AT5G65790.1 41.129 124 68 4 120 239 1 123 6.59e-21 94.4
Msa0457140 AT2G47460.1 35.294 153 83 4 120 269 1 140 6.75e-21 94.4
Msa0457140 AT1G16490.1 36.923 130 73 3 113 240 1 123 6.97e-21 92.4
Msa0457140 AT1G66370.1 38.211 123 70 2 120 241 1 118 8.55e-21 91.7
Msa0457140 AT1G14350.2 39.796 98 59 0 137 234 28 125 1.37e-20 94.0
Msa0457140 AT1G14350.1 39.796 98 59 0 137 234 28 125 1.37e-20 94.0
Msa0457140 AT2G02820.2 40.816 98 58 0 137 234 33 130 1.54e-20 94.4
Msa0457140 AT1G25340.2 41.584 101 55 1 134 234 20 116 1.82e-20 91.7
Msa0457140 AT2G02820.1 40.816 98 58 0 137 234 33 130 2.08e-20 93.6
Msa0457140 AT2G02820.3 43.956 91 51 0 137 227 33 123 2.56e-20 92.0
Msa0457140 AT5G49620.1 29.018 224 138 4 134 344 28 243 2.63e-20 91.7
Msa0457140 AT3G12820.1 37.815 119 71 2 122 238 4 121 3.28e-20 89.7
Msa0457140 AT5G52260.1 43.103 116 59 3 121 234 5 115 3.51e-20 90.5
Msa0457140 AT1G25340.3 41.584 101 55 1 134 234 20 116 3.99e-20 90.9
Msa0457140 AT4G37780.1 35.897 117 72 3 120 234 1 116 4.99e-20 90.9
Msa0457140 AT5G14750.3 50.794 63 31 0 167 229 18 80 5.93e-20 87.4
Msa0457140 AT1G66380.1 46.078 102 54 1 128 228 4 105 1.30e-19 85.5
Msa0457140 AT2G37630.1 35.036 137 84 2 136 267 6 142 1.53e-19 90.1
Msa0457140 AT5G14340.1 30.213 235 124 6 120 316 13 245 2.07e-19 88.2
Msa0457140 AT3G53200.2 32.298 161 94 2 167 320 12 164 2.15e-19 86.7
Msa0457140 AT1G56650.1 45.631 103 55 1 128 229 4 106 2.98e-19 87.4
Msa0457140 AT1G66390.1 46.078 102 54 1 128 228 4 105 1.70e-18 85.1
Msa0457140 AT3G06490.1 43.878 98 52 2 132 227 19 115 2.02e-18 86.3
Msa0457140 AT1G79180.2 31.852 135 58 2 134 234 16 150 9.35e-18 84.3
Msa0457140 AT3G27810.2 39.806 103 54 1 167 269 7 101 1.59e-17 80.5
Msa0457140 AT2G36890.1 36.752 117 71 3 120 234 1 116 1.89e-17 83.2
Msa0457140 AT5G59780.2 44.304 79 42 1 167 245 23 99 2.70e-17 80.9
Msa0457140 AT2G36890.2 36.752 117 71 3 120 234 42 157 3.87e-17 82.8
Msa0457140 AT5G40350.2 52.459 61 29 0 167 227 8 68 4.91e-17 79.0
Msa0457140 AT3G46130.4 45.205 73 40 0 167 239 23 95 6.06e-17 80.5
Msa0457140 AT3G46130.3 45.205 73 40 0 167 239 13 85 6.12e-17 80.1
Msa0457140 AT5G49620.2 27.311 238 138 5 134 344 28 257 6.43e-17 82.0
Msa0457140 AT3G47600.2 47.059 68 36 0 167 234 42 109 6.93e-17 82.0
Msa0457140 AT3G12820.2 44.444 72 40 0 167 238 2 73 7.18e-16 76.3
Msa0457140 AT3G18100.1 36.735 98 60 2 131 227 492 588 9.06e-15 77.4
Msa0457140 AT3G18100.1 36.170 94 60 0 134 227 546 639 5.54e-14 74.7
Msa0457140 AT1G22640.3 47.368 57 30 0 178 234 2 58 1.15e-14 73.2
Msa0457140 AT3G18100.3 36.735 98 60 2 131 227 444 540 1.29e-14 76.6
Msa0457140 AT3G18100.3 36.170 94 60 0 134 227 498 591 7.53e-14 74.3
Msa0457140 AT3G18100.4 36.735 98 60 2 131 227 331 427 1.60e-14 76.3
Msa0457140 AT3G18100.4 36.170 94 60 0 134 227 385 478 8.76e-14 73.9
Msa0457140 AT1G71030.2 40.000 65 39 0 170 234 5 69 1.89e-14 72.0
Msa0457140 AT3G18100.2 36.735 98 60 2 131 227 279 375 1.98e-14 75.9
Msa0457140 AT3G18100.2 36.170 94 60 0 134 227 333 426 1.18e-13 73.6
Msa0457140 AT1G71030.1 40.000 65 39 0 170 234 19 83 2.21e-14 72.0
Msa0457140 AT5G14750.4 39.706 68 41 0 178 245 2 69 3.10e-14 70.1
Msa0457140 AT5G14750.2 39.706 68 41 0 178 245 2 69 3.10e-14 70.1
Msa0457140 AT3G23250.2 31.724 145 84 3 178 321 2 132 4.14e-14 72.0
Msa0457140 AT1G66380.3 49.206 63 32 0 167 229 11 73 7.77e-13 65.1
Msa0457140 AT1G14350.3 43.333 60 34 0 175 234 23 82 1.81e-11 66.2
Msa0457140 AT1G14350.4 43.333 60 34 0 175 234 23 82 1.81e-11 66.2

Find 102 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTTGGTTTAGGGTAAT+TGG 0.208552 3_3:-51527969 None:intergenic
CTCTTCAAACCCTTACTCTT+TGG 0.235684 3_3:+51527871 Msa0457140:CDS
CTGCCATTGATAGATTCTTA+TGG 0.247531 3_3:+51524868 Msa0457140:CDS
AGGGTTTGAAGAGGGTTTCT+TGG 0.262586 3_3:-51527861 None:intergenic
GAATCTGATTACTGTTAGTT+TGG 0.268681 3_3:-51527904 None:intergenic
TTCTTGGAGTAGGGGTTAAC+AGG 0.288498 3_3:-51527845 None:intergenic
GTCTCAAATAGCTGAGAAAT+TGG 0.291297 3_3:+51525968 Msa0457140:CDS
GAAGGTAGTGATCAGAATTA+AGG 0.315331 3_3:-51528039 None:intergenic
GAAGAGGGTTTCTTGGAGTA+GGG 0.325395 3_3:-51527854 None:intergenic
ATCATTGGAATGCAACAAAA+AGG 0.334346 3_3:+51527513 Msa0457140:CDS
GAAGAGAGAGATGGATTTGT+TGG 0.339685 3_3:+51528135 Msa0457140:CDS
TGCCATTGATAGATTCTTAT+GGG 0.346398 3_3:+51524869 Msa0457140:CDS
GACATCATATTATTATTATT+AGG 0.352512 3_3:-51524996 None:intergenic
ATTGCATTCTCAGTTCTTCC+TGG 0.352568 3_3:-51527485 None:intergenic
CTCCCTGATGTTACTGATTG+TGG 0.355914 3_3:+51527926 Msa0457140:CDS
TAGCTTTGTTGATCAGCTAT+TGG 0.363373 3_3:+51525028 Msa0457140:CDS
AGAGATGGATTTGTTGGAGT+TGG 0.366710 3_3:+51528141 Msa0457140:CDS
GATCAAAATATTTATAGCTT+TGG 0.368101 3_3:+51524939 Msa0457140:CDS
GAAAATTTCATGAAACCAAT+TGG 0.372690 3_3:+51524780 None:intergenic
GAAGATGCGATCAATGGTTT+AGG 0.381677 3_3:+51525107 Msa0457140:CDS
AAGTGACATACTTTGATATC+AGG 0.394233 3_3:-51526041 None:intergenic
ATTAGGCCACATAAAACTAT+AGG 0.401368 3_3:-51524979 None:intergenic
AATCTGATTACTGTTAGTTT+GGG 0.404398 3_3:-51527903 None:intergenic
ATCACCAACCACTCTTCTAT+TGG 0.413518 3_3:+51524834 Msa0457140:CDS
AGCAATATGGTGTAAGAAAA+TGG 0.419388 3_3:+51525946 Msa0457140:CDS
CCACCAATACGTACTCCAAT+TGG 0.419604 3_3:-51524795 None:intergenic
TTTAGGGTAATTGGAAGGAT+TGG 0.423178 3_3:-51527960 None:intergenic
AGAATGCAATAAAGAATCAT+TGG 0.427236 3_3:+51527498 Msa0457140:CDS
GAGATAGCAAAGAGAATTCC+AGG 0.427432 3_3:+51527467 Msa0457140:CDS
TGAAGAGGGTTTCTTGGAGT+AGG 0.427723 3_3:-51527855 None:intergenic
AACAATGTGGAGTTGCATCT+TGG 0.428463 3_3:+51528091 Msa0457140:CDS
GAAGAATAATCCAAAGAGTA+AGG 0.430775 3_3:-51527881 None:intergenic
CTGAAGTTGGTGAAGCAATA+TGG 0.437823 3_3:+51525933 Msa0457140:CDS
ACAATGTGGAGTTGCATCTT+GGG 0.440360 3_3:+51528092 Msa0457140:CDS
CAAATGAAGAGGTGATGAAT+TGG 0.443517 3_3:+51525051 Msa0457140:CDS
GTAGAAACTCATGGCATGAT+TGG 0.452723 3_3:+51527431 Msa0457140:CDS
AAGGAAGATTGGTTTGAAGA+AGG 0.458004 3_3:-51527710 None:intergenic
GGAGTAGGGGTTAACAGGTT+CGG 0.458012 3_3:-51527840 None:intergenic
ACATGTTGCAGAAAGATAGT+TGG 0.459027 3_3:+51527384 Msa0457140:intron
ATTCAAGGAGAAAGAACAAA+AGG 0.472167 3_3:+51527543 Msa0457140:CDS
GAATTAAGGTAATTCATCAT+AGG 0.473352 3_3:-51528025 None:intergenic
AGGAAGATTGGTTTGAAGAA+GGG 0.477815 3_3:-51527709 None:intergenic
TTCTGAATTCCATTCAGCAT+TGG 0.479415 3_3:-51528064 None:intergenic
AATCCACAATCAGTAACATC+AGG 0.481489 3_3:-51527929 None:intergenic
TCAAAGGAAATTGCTGAAGT+TGG 0.481875 3_3:+51525920 Msa0457140:intron
TCTTTCTCCACACACAATGA+AGG 0.482009 3_3:-51525086 None:intergenic
TACCTTCCTCCAATGCTGAA+TGG 0.484131 3_3:+51528055 Msa0457140:CDS
GGAAAGGGTGCAAAAGTGGT+TGG 0.491374 3_3:+51525128 Msa0457140:CDS
TGAATTCCATTCAGCATTGG+AGG 0.495675 3_3:-51528061 None:intergenic
GGTTTACCATCAGTGGTTTG+AGG 0.505708 3_3:-51527566 None:intergenic
GAAAGCAGTGTAGGGAAAGA+TGG 0.507446 3_3:+51526003 Msa0457140:CDS
TTTAGGAAAGGGTGCAAAAG+TGG 0.509549 3_3:+51525124 Msa0457140:CDS
GAGAAATTGGAAGGAAGAGC+TGG 0.510204 3_3:+51525981 Msa0457140:CDS
TGAAAAGTTGTTGCATGAAG+AGG 0.512671 3_3:-51527802 None:intergenic
TGGCATGATTGGAAACCGTT+GGG 0.512956 3_3:+51527442 Msa0457140:CDS
GTTGGAGTGAAGAAGAAGAA+AGG 0.512967 3_3:+51527402 Msa0457140:CDS
AAACCAATTGGAGTACGTAT+TGG 0.519717 3_3:+51524792 Msa0457140:CDS
GCGATCAATGGTTTAGGAAA+GGG 0.521321 3_3:+51525113 Msa0457140:CDS
GAAGAGCTGGAAAGCAGTGT+AGG 0.523888 3_3:+51525994 Msa0457140:CDS
ATGGCATGATTGGAAACCGT+TGG 0.528169 3_3:+51527441 Msa0457140:CDS
AAGAGGGTTTCTTGGAGTAG+GGG 0.530916 3_3:-51527853 None:intergenic
AGTCCACTGTCCTTTGATCA+AGG 0.536979 3_3:-51525180 None:intergenic
CCAATTGGAGTACGTATTGG+TGG 0.542694 3_3:+51524795 Msa0457140:CDS
AAGAGCTGGAAAGCAGTGTA+GGG 0.544280 3_3:+51525995 Msa0457140:CDS
AGATTGTGGTTTACCATCAG+TGG 0.552835 3_3:-51527573 None:intergenic
AGTAGTAGTAGCAGTAGTAC+CGG 0.553178 3_3:-51527645 None:intergenic
TGCGATCAATGGTTTAGGAA+AGG 0.553524 3_3:+51525112 Msa0457140:CDS
GAGAAAGAAGATGCGATCAA+TGG 0.556688 3_3:+51525101 Msa0457140:CDS
GGGAATATGAATTTCTCAGA+GGG 0.558195 3_3:+51528112 Msa0457140:CDS
TCTTGAAGAATAGAAGATTG+TGG 0.558587 3_3:-51527587 None:intergenic
ACCCCATAAGAATCTATCAA+TGG 0.560596 3_3:-51524871 None:intergenic
TTCCATTCAGCATTGGAGGA+AGG 0.564838 3_3:-51528057 None:intergenic
CAAATAGCTGAGAAATTGGA+AGG 0.565570 3_3:+51525972 Msa0457140:CDS
AAAGAGTAAGGGTTTGAAGA+GGG 0.566918 3_3:-51527869 None:intergenic
ACAAATTCCTTCATTGTGTG+TGG 0.567848 3_3:+51525079 Msa0457140:CDS
TCATAAGATTCAGATATAAG+TGG 0.570449 3_3:-51527770 None:intergenic
CTCAGAGGGGAAGAGAGAGA+TGG 0.571224 3_3:+51528126 Msa0457140:CDS
AATCTATCAATGGCAGTCAA+AGG 0.571369 3_3:-51524861 None:intergenic
AAGAATAATCCAAAGAGTAA+GGG 0.575024 3_3:-51527880 None:intergenic
TTTGGTTTAGGGTAATTGGA+AGG 0.578739 3_3:-51527965 None:intergenic
AGTAGTAGCAGTAGTACCGG+TGG 0.586523 3_3:-51527642 None:intergenic
CAAAGAGTAAGGGTTTGAAG+AGG 0.591380 3_3:-51527870 None:intergenic
GTCCTCAGAGATCGCTGACA+CGG 0.599223 3_3:-51527687 None:intergenic
AGTGGACTGATGAAGAAGAC+AGG 0.601588 3_3:+51525195 Msa0457140:CDS
AGGACCAATAGAAGAGTGGT+TGG 0.605891 3_3:-51524838 None:intergenic
TTTCCTTGATCAAAGGACAG+TGG 0.611527 3_3:+51525177 Msa0457140:CDS
TCTTTGCTATCTCCGCCCAA+CGG 0.615526 3_3:-51527457 None:intergenic
AAAAGGCCTCAAACCACTGA+TGG 0.628725 3_3:+51527560 Msa0457140:CDS
TCAGCTATTGGCAAATGAAG+AGG 0.629014 3_3:+51525040 Msa0457140:CDS
AAGGTAATTCATCATAGGTG+AGG 0.637959 3_3:-51528020 None:intergenic
CATGATTGGAAACCGTTGGG+CGG 0.641685 3_3:+51527445 Msa0457140:CDS
GCCATTGATAGATTCTTATG+GGG 0.643647 3_3:+51524870 Msa0457140:CDS
ATCCACAATCAGTAACATCA+GGG 0.650690 3_3:-51527928 None:intergenic
CTATCAATGGCAGTCAAAGG+AGG 0.652795 3_3:-51524858 None:intergenic
AAAGATGGCATAATCATCTG+AGG 0.662817 3_3:+51526018 Msa0457140:CDS
CTCCGTGTCAGCGATCTCTG+AGG 0.667016 3_3:+51527685 Msa0457140:CDS
AAGGAGGACCAATAGAAGAG+TGG 0.673968 3_3:-51524842 None:intergenic
TGGGAATATGAATTTCTCAG+AGG 0.674443 3_3:+51528111 Msa0457140:CDS
AGGATGCTAGTAGAAACTCA+TGG 0.688422 3_3:+51527422 Msa0457140:CDS
GGAATATGAATTTCTCAGAG+GGG 0.702999 3_3:+51528113 Msa0457140:CDS
ATTGGAGTACGTATTGGTGG+TGG 0.703614 3_3:+51524798 Msa0457140:CDS
AATTCAGAATCAGAACAATG+TGG 0.714283 3_3:+51528078 Msa0457140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAATAATATATATT+TGG + chr3_3:51525539-51525558 Msa0457140:intron 0.0%
!!! TATTTTTAATAATATATATT+TGG + chr3_3:51525570-51525589 Msa0457140:intron 0.0%
!!! TTTTTATGATATTATATACT+TGG + chr3_3:51525380-51525399 Msa0457140:intron 10.0%
!!! GTCTTTTAATAATATATATT+TGG + chr3_3:51525681-51525700 Msa0457140:intron 10.0%
!!! GTCTTTTAATAATATATATT+TGG + chr3_3:51525681-51525700 Msa0457140:intron 10.0%
!! AAATATATTGAAAAAATTGA+AGG - chr3_3:51526074-51526093 None:intergenic 10.0%
!! AAAATATAACTAAATATTCT+AGG - chr3_3:51526535-51526554 None:intergenic 10.0%
!!! AAAATTTTTTAATTGTCTTT+TGG + chr3_3:51526980-51526999 Msa0457140:intron 10.0%
!! GACATCATATTATTATTATT+AGG - chr3_3:51524999-51525018 None:intergenic 15.0%
!!! TATATTTGGACTAAATTTTA+AGG + chr3_3:51525584-51525603 Msa0457140:intron 15.0%
!!! GTCTTGTTATATAAAAAAAA+TGG + chr3_3:51525606-51525625 Msa0457140:intron 15.0%
!!! GTCTTGTTATATAAAAAAAA+TGG + chr3_3:51525606-51525625 Msa0457140:intron 15.0%
!!! AAATCATAGATAAATTTTCA+AGG - chr3_3:51526205-51526224 None:intergenic 15.0%
!!! ATATTTATCTTTTAAACTCT+TGG + chr3_3:51526631-51526650 Msa0457140:intron 15.0%
!!! TATTTATCTTTTAAACTCTT+GGG + chr3_3:51526632-51526651 Msa0457140:intron 15.0%
!!! TAAATATAAAGAGTATACTA+AGG - chr3_3:51527216-51527235 None:intergenic 15.0%
!! TTTATATTTACTTATCGATA+TGG + chr3_3:51527226-51527245 Msa0457140:intron 15.0%
!! GATCAAAATATTTATAGCTT+TGG + chr3_3:51524939-51524958 Msa0457140:CDS 20.0%
!!! TATATTTGGGCTAAATTTTA+AGG + chr3_3:51525695-51525714 Msa0457140:intron 20.0%
!!! TTGTTGTTATCTAAAATCAA+AGG + chr3_3:51525729-51525748 Msa0457140:intron 20.0%
!!! TATATTTGGGCTAAATTTTA+AGG + chr3_3:51525695-51525714 Msa0457140:intron 20.0%
!!! TTGTTGTTATCTAAAATCAA+AGG + chr3_3:51525729-51525748 Msa0457140:intron 20.0%
!!! TGTTCTATATTTTTTTTGAG+AGG - chr3_3:51526151-51526170 None:intergenic 20.0%
!! ATTCATGTGAATGATAAATT+TGG - chr3_3:51526360-51526379 None:intergenic 20.0%
!! TTTGTTGAAGTTTCTTTTGA+GGG - chr3_3:51524911-51524930 None:intergenic 25.0%
!! TTTTGTTGAAGTTTCTTTTG+AGG - chr3_3:51524912-51524931 None:intergenic 25.0%
! AAACACTCAAACAACAATTA+GGG - chr3_3:51525234-51525253 None:intergenic 25.0%
!!! TTTGATAATGCATGTAAATG+CGG + chr3_3:51525306-51525325 Msa0457140:intron 25.0%
! TATACTTGGACTAAATTTGA+AGG + chr3_3:51525394-51525413 Msa0457140:intron 25.0%
!!! TTTGAAGGTGTTTTGTTATT+TGG + chr3_3:51525409-51525428 Msa0457140:intron 25.0%
!!! TTGGTGTTACTTTTAAACAA+AGG + chr3_3:51525428-51525447 Msa0457140:intron 25.0%
!!! GCATCTAATTTGATTTTTCT+AGG + chr3_3:51526567-51526586 Msa0457140:intron 25.0%
!!! ATTTTTCTAGGATCTATCTT+TGG + chr3_3:51526579-51526598 Msa0457140:intron 25.0%
! GTCAAAGATTAATACATACA+AGG + chr3_3:51526670-51526689 Msa0457140:intron 25.0%
! ATGCAAGTCAATGATAAATT+TGG - chr3_3:51526713-51526732 None:intergenic 25.0%
! TATGACAATAAATCCAAACT+AGG - chr3_3:51526803-51526822 None:intergenic 25.0%
! GAAACTTGGAAAAAAAAGTA+CGG - chr3_3:51527284-51527303 None:intergenic 25.0%
!!! CTTTTTTTTCCAAGTTTCTT+CGG + chr3_3:51527286-51527305 Msa0457140:intron 25.0%
! GTAAGTCTAATGTTAGTAAA+TGG + chr3_3:51527308-51527327 Msa0457140:intron 25.0%
! AGAATGCAATAAAGAATCAT+TGG + chr3_3:51527498-51527517 Msa0457140:CDS 25.0%
! TAGAAAAAACAAAGGAAGAT+TGG - chr3_3:51527724-51527743 None:intergenic 25.0%
! TCATAAGATTCAGATATAAG+TGG - chr3_3:51527773-51527792 None:intergenic 25.0%
! AAGAATAATCCAAAGAGTAA+GGG - chr3_3:51527883-51527902 None:intergenic 25.0%
!! AATCTGATTACTGTTAGTTT+GGG - chr3_3:51527906-51527925 None:intergenic 25.0%
!!! TGTTTTGTGAATTTGGTTTA+GGG - chr3_3:51527979-51527998 None:intergenic 25.0%
!!! TTGTTTTGTGAATTTGGTTT+AGG - chr3_3:51527980-51527999 None:intergenic 25.0%
!!! TACATGTTGTTTTGTGAATT+TGG - chr3_3:51527986-51528005 None:intergenic 25.0%
! GAATTAAGGTAATTCATCAT+AGG - chr3_3:51528028-51528047 None:intergenic 25.0%
TGCCATTGATAGATTCTTAT+GGG + chr3_3:51524869-51524888 Msa0457140:CDS 30.0%
!!! CTTCAACCTATAGTTTTATG+TGG + chr3_3:51524973-51524992 Msa0457140:CDS 30.0%
ATTAGGCCACATAAAACTAT+AGG - chr3_3:51524982-51525001 None:intergenic 30.0%
GAAAAAGAAGACACTTTCTT+AGG - chr3_3:51525161-51525180 None:intergenic 30.0%
! TCTTCTTTTTCCTTGATCAA+AGG + chr3_3:51525170-51525189 Msa0457140:CDS 30.0%
CAAACACTCAAACAACAATT+AGG - chr3_3:51525235-51525254 None:intergenic 30.0%
!! TAGCATATGGTTCTAAATTG+CGG + chr3_3:51525259-51525278 Msa0457140:intron 30.0%
AGCAATATGGTGTAAGAAAA+TGG + chr3_3:51525946-51525965 Msa0457140:CDS 30.0%
AAGTGACATACTTTGATATC+AGG - chr3_3:51526044-51526063 None:intergenic 30.0%
TCTATATCTTATGAACTTGC+AGG + chr3_3:51526317-51526336 Msa0457140:intron 30.0%
ATTAATCCAAACGTGGATTT+AGG - chr3_3:51526443-51526462 None:intergenic 30.0%
TAAGACAATTAATCCAAACG+TGG - chr3_3:51526450-51526469 None:intergenic 30.0%
TATCCTACTTATGAGAAAAG+TGG - chr3_3:51526506-51526525 None:intergenic 30.0%
ATAAATCCAAACTAGGATTC+AGG - chr3_3:51526796-51526815 None:intergenic 30.0%
AAACCTTGTCAAGGTTATTT+GGG - chr3_3:51526479-51526498 None:intergenic 30.0%
CTACTTATGAGAAATATGGA+GGG - chr3_3:51526890-51526909 None:intergenic 30.0%
CTCCATATTTCTCATAAGTA+GGG + chr3_3:51526889-51526908 Msa0457140:intron 30.0%
!! ACTATATGAAAGTGCTAGAT+TGG + chr3_3:51527054-51527073 Msa0457140:intron 30.0%
TCATTCCATGTTTAGATTCA+CGG + chr3_3:51527157-51527176 Msa0457140:intron 30.0%
TGCAACATGTAAAGTAAGTT+CGG - chr3_3:51527374-51527393 None:intergenic 30.0%
ATCATTGGAATGCAACAAAA+AGG + chr3_3:51527513-51527532 Msa0457140:CDS 30.0%
CAAAAAGGAGACAAAATTCA+AGG + chr3_3:51527528-51527547 Msa0457140:CDS 30.0%
ATTCAAGGAGAAAGAACAAA+AGG + chr3_3:51527543-51527562 Msa0457140:CDS 30.0%
TCTTGAAGAATAGAAGATTG+TGG - chr3_3:51527590-51527609 None:intergenic 30.0%
GGATAGGTTAGAAAAAACAA+AGG - chr3_3:51527732-51527751 None:intergenic 30.0%
! ATGATGAATTTTCATGGGAT+AGG - chr3_3:51527748-51527767 None:intergenic 30.0%
!! TGGTGATGATGAATTTTCAT+GGG - chr3_3:51527753-51527772 None:intergenic 30.0%
GAAGAATAATCCAAAGAGTA+AGG - chr3_3:51527884-51527903 None:intergenic 30.0%
GAATCTGATTACTGTTAGTT+TGG - chr3_3:51527907-51527926 None:intergenic 30.0%
! TGAATTTGGTTTAGGGTAAT+TGG - chr3_3:51527972-51527991 None:intergenic 30.0%
AATTCAGAATCAGAACAATG+TGG + chr3_3:51528078-51528097 Msa0457140:CDS 30.0%
AAACCAATTGGAGTACGTAT+TGG + chr3_3:51524792-51524811 Msa0457140:CDS 35.0%
AATCTATCAATGGCAGTCAA+AGG - chr3_3:51524864-51524883 None:intergenic 35.0%
CTGCCATTGATAGATTCTTA+TGG + chr3_3:51524868-51524887 Msa0457140:CDS 35.0%
GCCATTGATAGATTCTTATG+GGG + chr3_3:51524870-51524889 Msa0457140:CDS 35.0%
ACCCCATAAGAATCTATCAA+TGG - chr3_3:51524874-51524893 None:intergenic 35.0%
!! TAGCTTTGTTGATCAGCTAT+TGG + chr3_3:51525028-51525047 Msa0457140:CDS 35.0%
CAAATGAAGAGGTGATGAAT+TGG + chr3_3:51525051-51525070 Msa0457140:CDS 35.0%
ACAAATTCCTTCATTGTGTG+TGG + chr3_3:51525079-51525098 Msa0457140:CDS 35.0%
GAGTGTTTGTTTGTAGCATA+TGG + chr3_3:51525246-51525265 Msa0457140:intron 35.0%
TCAAAGGAAATTGCTGAAGT+TGG + chr3_3:51525745-51525764 Msa0457140:intron 35.0%
!! TGAAGTTGGTGAAGCAATTA+AGG + chr3_3:51525759-51525778 Msa0457140:intron 35.0%
TCAAAGGAAATTGCTGAAGT+TGG + chr3_3:51525745-51525764 Msa0457140:intron 35.0%
GTCTCAAATAGCTGAGAAAT+TGG + chr3_3:51525968-51525987 Msa0457140:CDS 35.0%
CAAATAGCTGAGAAATTGGA+AGG + chr3_3:51525972-51525991 Msa0457140:CDS 35.0%
AAAGATGGCATAATCATCTG+AGG + chr3_3:51526018-51526037 Msa0457140:CDS 35.0%
GAAACCTTGTCAAGGTTATT+TGG - chr3_3:51526480-51526499 None:intergenic 35.0%
CTACTTATGAGAAAAGTGGA+GGG - chr3_3:51526502-51526521 None:intergenic 35.0%
GGAGAAATGTGAGAAATTGT+GGG - chr3_3:51526775-51526794 None:intergenic 35.0%
AGGAGAAATGTGAGAAATTG+TGG - chr3_3:51526776-51526795 None:intergenic 35.0%
ATTTCTCCTGAATCCTAGTT+TGG + chr3_3:51526787-51526806 Msa0457140:intron 35.0%
!!! AAGGTTATTTGGGTTTTGGA+GGG - chr3_3:51526857-51526876 None:intergenic 35.0%
!! TGTCAAGGTTATTTGGGTTT+TGG - chr3_3:51526861-51526880 None:intergenic 35.0%
AAACCCAAATAACCTTGACA+AGG + chr3_3:51526861-51526880 Msa0457140:intron 35.0%
GAAACCTTGTCAAGGTTATT+TGG - chr3_3:51526480-51526499 None:intergenic 35.0%
CCTACTTATGAGAAATATGG+AGG - chr3_3:51526891-51526910 None:intergenic 35.0%
CCTCCATATTTCTCATAAGT+AGG + chr3_3:51526888-51526907 Msa0457140:intron 35.0%
CACCCTACTTATGAGAAATA+TGG - chr3_3:51526894-51526913 None:intergenic 35.0%
ATGACTAAATCACACCAACA+AGG + chr3_3:51526922-51526941 Msa0457140:intron 35.0%
!! TGAAAGTGCTAGATTGGAAA+TGG + chr3_3:51527060-51527079 Msa0457140:intron 35.0%
ATTCACCGTGAATCTAAACA+TGG - chr3_3:51527165-51527184 None:intergenic 35.0%
TTAGACTTACCGAAGAAACT+TGG - chr3_3:51527298-51527317 None:intergenic 35.0%
ACATGTTGCAGAAAGATAGT+TGG + chr3_3:51527384-51527403 Msa0457140:intron 35.0%
!! AGGAAGATTGGTTTGAAGAA+GGG - chr3_3:51527712-51527731 None:intergenic 35.0%
!! AAGGAAGATTGGTTTGAAGA+AGG - chr3_3:51527713-51527732 None:intergenic 35.0%
!! GTGGTGATGATGAATTTTCA+TGG - chr3_3:51527754-51527773 None:intergenic 35.0%
TGAAAAGTTGTTGCATGAAG+AGG - chr3_3:51527805-51527824 None:intergenic 35.0%
! CTTCATGCAACAACTTTTCA+AGG + chr3_3:51527805-51527824 Msa0457140:CDS 35.0%
AAAGAGTAAGGGTTTGAAGA+GGG - chr3_3:51527872-51527891 None:intergenic 35.0%
ATCCACAATCAGTAACATCA+GGG - chr3_3:51527931-51527950 None:intergenic 35.0%
AATCCACAATCAGTAACATC+AGG - chr3_3:51527932-51527951 None:intergenic 35.0%
! TTTAGGGTAATTGGAAGGAT+TGG - chr3_3:51527963-51527982 None:intergenic 35.0%
! TTTGGTTTAGGGTAATTGGA+AGG - chr3_3:51527968-51527987 None:intergenic 35.0%
AAGGTAATTCATCATAGGTG+AGG - chr3_3:51528023-51528042 None:intergenic 35.0%
GAAGGTAGTGATCAGAATTA+AGG - chr3_3:51528042-51528061 None:intergenic 35.0%
TTCTGAATTCCATTCAGCAT+TGG - chr3_3:51528067-51528086 None:intergenic 35.0%
TGGGAATATGAATTTCTCAG+AGG + chr3_3:51528111-51528130 Msa0457140:CDS 35.0%
GGGAATATGAATTTCTCAGA+GGG + chr3_3:51528112-51528131 Msa0457140:CDS 35.0%
GGAATATGAATTTCTCAGAG+GGG + chr3_3:51528113-51528132 Msa0457140:CDS 35.0%
ATCACCAACCACTCTTCTAT+TGG + chr3_3:51524834-51524853 Msa0457140:CDS 40.0%
!! GAAGTTTCTTTTGAGGGAAG+TGG - chr3_3:51524905-51524924 None:intergenic 40.0%
TCAGCTATTGGCAAATGAAG+AGG + chr3_3:51525040-51525059 Msa0457140:CDS 40.0%
TCTTTCTCCACACACAATGA+AGG - chr3_3:51525089-51525108 None:intergenic 40.0%
GAGAAAGAAGATGCGATCAA+TGG + chr3_3:51525101-51525120 Msa0457140:CDS 40.0%
GAAGATGCGATCAATGGTTT+AGG + chr3_3:51525107-51525126 Msa0457140:CDS 40.0%
TGCGATCAATGGTTTAGGAA+AGG + chr3_3:51525112-51525131 Msa0457140:CDS 40.0%
GCGATCAATGGTTTAGGAAA+GGG + chr3_3:51525113-51525132 Msa0457140:CDS 40.0%
! TTTAGGAAAGGGTGCAAAAG+TGG + chr3_3:51525124-51525143 Msa0457140:CDS 40.0%
TTTCCTTGATCAAAGGACAG+TGG + chr3_3:51525177-51525196 Msa0457140:CDS 40.0%
! GTTCTAAATTGCAGCCGAAT+CGG - chr3_3:51525332-51525351 None:intergenic 40.0%
!! CTGAAGTTGGTGAAGCAATA+TGG + chr3_3:51525933-51525952 Msa0457140:CDS 40.0%
GGAATGTGAGAAAATGTTGG+AGG - chr3_3:51526419-51526438 None:intergenic 40.0%
GGAGGAATGTGAGAAAATGT+TGG - chr3_3:51526422-51526441 None:intergenic 40.0%
ATTCCTCCTAAATCCACGTT+TGG + chr3_3:51526434-51526453 Msa0457140:intron 40.0%
AATCCAAACGTGGATTTAGG+AGG - chr3_3:51526440-51526459 None:intergenic 40.0%
CCTTGTCAAGGTTATTTGGA+GGG - chr3_3:51526476-51526495 None:intergenic 40.0%
ACCTTGTCAAGGTTATTTGG+AGG - chr3_3:51526477-51526496 None:intergenic 40.0%
CCTACTTATGAGAAAAGTGG+AGG - chr3_3:51526503-51526522 None:intergenic 40.0%
!! CCTCCACTTTTCTCATAAGT+AGG + chr3_3:51526500-51526519 Msa0457140:intron 40.0%
GAAATGTGAGAAATTGTGGG+AGG - chr3_3:51526772-51526791 None:intergenic 40.0%
!! CAAGGTTATTTGGGTTTTGG+AGG - chr3_3:51526858-51526877 None:intergenic 40.0%
TGAGTATTTGCACACCTTGT+TGG - chr3_3:51526939-51526958 None:intergenic 40.0%
GTAAGTTCGGAGTCATAAAG+TGG - chr3_3:51527361-51527380 None:intergenic 40.0%
GTTGGAGTGAAGAAGAAGAA+AGG + chr3_3:51527402-51527421 Msa0457140:CDS 40.0%
AGGATGCTAGTAGAAACTCA+TGG + chr3_3:51527422-51527441 Msa0457140:CDS 40.0%
GTAGAAACTCATGGCATGAT+TGG + chr3_3:51527431-51527450 Msa0457140:CDS 40.0%
GAGATAGCAAAGAGAATTCC+AGG + chr3_3:51527467-51527486 Msa0457140:CDS 40.0%
ATTGCATTCTCAGTTCTTCC+TGG - chr3_3:51527488-51527507 None:intergenic 40.0%
AGATTGTGGTTTACCATCAG+TGG - chr3_3:51527576-51527595 None:intergenic 40.0%
!! ACTACTCAAAAAGCATCCAC+CGG + chr3_3:51527626-51527645 Msa0457140:CDS 40.0%
AGTAGTAGTAGCAGTAGTAC+CGG - chr3_3:51527648-51527667 None:intergenic 40.0%
CAAAGAGTAAGGGTTTGAAG+AGG - chr3_3:51527873-51527892 None:intergenic 40.0%
CTCTTCAAACCCTTACTCTT+TGG + chr3_3:51527871-51527890 Msa0457140:CDS 40.0%
! TGAATTCCATTCAGCATTGG+AGG - chr3_3:51528064-51528083 None:intergenic 40.0%
AACAATGTGGAGTTGCATCT+TGG + chr3_3:51528091-51528110 Msa0457140:CDS 40.0%
ACAATGTGGAGTTGCATCTT+GGG + chr3_3:51528092-51528111 Msa0457140:CDS 40.0%
! GAAGAGAGAGATGGATTTGT+TGG + chr3_3:51528135-51528154 Msa0457140:CDS 40.0%
!! AGAGATGGATTTGTTGGAGT+TGG + chr3_3:51528141-51528160 Msa0457140:CDS 40.0%
CCACCAATACGTACTCCAAT+TGG - chr3_3:51524798-51524817 None:intergenic 45.0%
CCAATTGGAGTACGTATTGG+TGG + chr3_3:51524795-51524814 Msa0457140:CDS 45.0%
! ATTGGAGTACGTATTGGTGG+TGG + chr3_3:51524798-51524817 Msa0457140:CDS 45.0%
AGGACCAATAGAAGAGTGGT+TGG - chr3_3:51524841-51524860 None:intergenic 45.0%
AAGGAGGACCAATAGAAGAG+TGG - chr3_3:51524845-51524864 None:intergenic 45.0%
CTATCAATGGCAGTCAAAGG+AGG - chr3_3:51524861-51524880 None:intergenic 45.0%
AGTCCACTGTCCTTTGATCA+AGG - chr3_3:51525183-51525202 None:intergenic 45.0%
!! AGTGGACTGATGAAGAAGAC+AGG + chr3_3:51525195-51525214 Msa0457140:CDS 45.0%
GAGAAATTGGAAGGAAGAGC+TGG + chr3_3:51525981-51526000 Msa0457140:CDS 45.0%
AAGAGCTGGAAAGCAGTGTA+GGG + chr3_3:51525995-51526014 Msa0457140:CDS 45.0%
GAAAGCAGTGTAGGGAAAGA+TGG + chr3_3:51526003-51526022 Msa0457140:CDS 45.0%
CCCTCCAAATAACCTTGACA+AGG + chr3_3:51526473-51526492 Msa0457140:intron 45.0%
TATGGAGGGAAACCTTGTCA+AGG - chr3_3:51526876-51526895 None:intergenic 45.0%
ATGGCATGATTGGAAACCGT+TGG + chr3_3:51527441-51527460 Msa0457140:CDS 45.0%
TGGCATGATTGGAAACCGTT+GGG + chr3_3:51527442-51527461 Msa0457140:CDS 45.0%
AAAAGGCCTCAAACCACTGA+TGG + chr3_3:51527560-51527579 Msa0457140:CDS 45.0%
GGTTTACCATCAGTGGTTTG+AGG - chr3_3:51527569-51527588 None:intergenic 45.0%
TTCTTGGAGTAGGGGTTAAC+AGG - chr3_3:51527848-51527867 None:intergenic 45.0%
AAGAGGGTTTCTTGGAGTAG+GGG - chr3_3:51527856-51527875 None:intergenic 45.0%
GAAGAGGGTTTCTTGGAGTA+GGG - chr3_3:51527857-51527876 None:intergenic 45.0%
TGAAGAGGGTTTCTTGGAGT+AGG - chr3_3:51527858-51527877 None:intergenic 45.0%
AGGGTTTGAAGAGGGTTTCT+TGG - chr3_3:51527864-51527883 None:intergenic 45.0%
! CTCCCTGATGTTACTGATTG+TGG + chr3_3:51527926-51527945 Msa0457140:CDS 45.0%
TACCTTCCTCCAATGCTGAA+TGG + chr3_3:51528055-51528074 Msa0457140:CDS 45.0%
! TTCCATTCAGCATTGGAGGA+AGG - chr3_3:51528060-51528079 None:intergenic 45.0%
!!! TCTTTTAATAATATATATTT+GGG + chr3_3:51525682-51525701 Msa0457140:intron 5.0%
!!! TCTTTTAATAATATATATTT+GGG + chr3_3:51525682-51525701 Msa0457140:intron 5.0%
! GGAAAGGGTGCAAAAGTGGT+TGG + chr3_3:51525128-51525147 Msa0457140:CDS 50.0%
GCATGTAAATGCGGCCGATT+CGG + chr3_3:51525315-51525334 Msa0457140:intron 50.0%
GAAGAGCTGGAAAGCAGTGT+AGG + chr3_3:51525994-51526013 Msa0457140:CDS 50.0%
AGTGGAGGGAAACCTTGTCA+AGG - chr3_3:51526488-51526507 None:intergenic 50.0%
TATCTTTGGCACATCTGCGC+AGG + chr3_3:51526593-51526612 Msa0457140:intron 50.0%
CATGATTGGAAACCGTTGGG+CGG + chr3_3:51527445-51527464 Msa0457140:CDS 50.0%
! TCTTTGCTATCTCCGCCCAA+CGG - chr3_3:51527460-51527479 None:intergenic 50.0%
! AGTAGTAGCAGTAGTACCGG+TGG - chr3_3:51527645-51527664 None:intergenic 50.0%
GGAGTAGGGGTTAACAGGTT+CGG - chr3_3:51527843-51527862 None:intergenic 50.0%
GTCCTCAGAGATCGCTGACA+CGG - chr3_3:51527690-51527709 None:intergenic 55.0%
CTCAGAGGGGAAGAGAGAGA+TGG + chr3_3:51528126-51528145 Msa0457140:CDS 55.0%
CTCCGTGTCAGCGATCTCTG+AGG + chr3_3:51527685-51527704 Msa0457140:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 51524789 51528186 51524789 ID=Msa0457140;Name=Msa0457140
chr3_3 mRNA 51524789 51528186 51524789 ID=Msa0457140-mRNA-1;Parent=Msa0457140;Name=Msa0457140-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|448
chr3_3 exon 51524789 51525216 51524789 ID=Msa0457140-mRNA-1:exon:9911;Parent=Msa0457140-mRNA-1
chr3_3 exon 51525926 51526052 51525926 ID=Msa0457140-mRNA-1:exon:9912;Parent=Msa0457140-mRNA-1
chr3_3 exon 51527395 51528186 51527395 ID=Msa0457140-mRNA-1:exon:9913;Parent=Msa0457140-mRNA-1
chr3_3 CDS 51524789 51525216 51524789 ID=Msa0457140-mRNA-1:cds;Parent=Msa0457140-mRNA-1
chr3_3 CDS 51525926 51526052 51525926 ID=Msa0457140-mRNA-1:cds;Parent=Msa0457140-mRNA-1
chr3_3 CDS 51527395 51528186 51527395 ID=Msa0457140-mRNA-1:cds;Parent=Msa0457140-mRNA-1
Gene Sequence

>Msa0457140

ATGAAACCAATTGGAGTACGTATTGGTGGTGGTGATAATTTAAAGATCACCAACCACTCTTCTATTGGTCCTCCTTTGACTGCCATTGATAGATTCTTATGGGGTCAACACAACCACTTCCCTCAAAAGAAACTTCAACAAAATGTTGATGATCAAAATATTTATAGCTTTGGTTGTTCGAATGCTTCAACCTATAGTTTTATGTGGCCTAATAATAATAATATGATGTCTCAAGAAGCTAGCTTTGTTGATCAGCTATTGGCAAATGAAGAGGTGATGAATTGGACACAACAAATTCCTTCATTGTGTGTGGAGAAAGAAGATGCGATCAATGGTTTAGGAAAGGGTGCAAAAGTGGTTGGAAGAAGACCTAAGAAAGTGTCTTCTTTTTCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAATTGCTGAAGTTGGTGAAGCAATATGGTGTAAGAAAATGGTCTCAAATAGCTGAGAAATTGGAAGGAAGAGCTGGAAAGCAGTGTAGGGAAAGATGGCATAATCATCTGAGGCCTGATATCAAAAAAGATAGTTGGAGTGAAGAAGAAGAAAGGATGCTAGTAGAAACTCATGGCATGATTGGAAACCGTTGGGCGGAGATAGCAAAGAGAATTCCAGGAAGAACTGAGAATGCAATAAAGAATCATTGGAATGCAACAAAAAGGAGACAAAATTCAAGGAGAAAGAACAAAAGGCCTCAAACCACTGATGGTAAACCACAATCTTCTATTCTTCAAGACTACATCAAAATTTTGACTACTCAAAAAGCATCCACCGGTACTACTGCTACTACTACTACTGCTGCTACTACTAGCTCCGTGTCAGCGATCTCTGAGGACCCTTCTTCAAACCAATCTTCCTTTGTTTTTTCTAACCTATCCCATGAAAATTCATCATCACCACTTATATCTGAATCTTATGATGATGAACTCCTCTTCATGCAACAACTTTTCAAGGTGAATAATAACGCCGAACCTGTTAACCCCTACTCCAAGAAACCCTCTTCAAACCCTTACTCTTTGGATTATTCTTCCCAAACTAACAGTAATCAGATTCTCCCTGATGTTACTGATTGTGGATTTGTTCATTCCAATCCTTCCAATTACCCTAAACCAAATTCACAAAACAACATGTACTTGAGTACTTCTTCCTCACCTATGATGAATTACCTTAATTCTGATCACTACCTTCCTCCAATGCTGAATGGAATTCAGAATCAGAACAATGTGGAGTTGCATCTTGGGAATATGAATTTCTCAGAGGGGAAGAGAGAGATGGATTTGTTGGAGTTGGTTTCTTCTGCTCAGTTTTATTAG
Protein sequence

>Msa0457140

MKPIGVRIGGGDNLKITNHSSIGPPLTAIDRFLWGQHNHFPQKKLQQNVDDQNIYSFGCSNASTYSFMWPNNNNMMSQEASFVDQLLANEEVMNWTQQIPSLCVEKEDAINGLGKGAKVVGRRPKKVSSFSLIKGQWTDEEDRKLLKLVKQYGVRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERMLVETHGMIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSRRKNKRPQTTDGKPQSSILQDYIKILTTQKASTGTTATTTTAATTSSVSAISEDPSSNQSSFVFSNLSHENSSSPLISESYDDELLFMQQLFKVNNNAEPVNPYSKKPSSNPYSLDYSSQTNSNQILPDVTDCGFVHSNPSNYPKPNSQNNMYLSTSSSPMMNYLNSDHYLPPMLNGIQNQNNVELHLGNMNFSEGKREMDLLELVSSAQFY*