Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457520 | KEH34246.1 | 95.890 | 219 | 9 | 0 | 165 | 383 | 1 | 219 | 1.74e-149 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457520 | sp|P05332|YP20_BACLI | 36.364 | 176 | 95 | 5 | 171 | 337 | 8 | 175 | 2.53e-20 | 90.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457520 | A0A072UXR7 | 95.890 | 219 | 9 | 0 | 165 | 383 | 1 | 219 | 8.31e-150 | 431 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0457520 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457520 | MtrunA17_Chr3g0104601 | 81.761 | 159 | 0 | 1 | 1 | 159 | 1 | 130 | 3.76e-87 | 260 |
| Msa0457520 | MtrunA17_Chr7g0273661 | 63.462 | 156 | 54 | 1 | 167 | 322 | 4 | 156 | 1.23e-70 | 218 |
| Msa0457520 | MtrunA17_Chr7g0223351 | 52.976 | 168 | 74 | 2 | 170 | 337 | 7 | 169 | 5.33e-52 | 171 |
| Msa0457520 | MtrunA17_Chr7g0223361 | 48.538 | 171 | 84 | 2 | 167 | 337 | 4 | 170 | 1.77e-48 | 162 |
| Msa0457520 | MtrunA17_Chr1g0204951 | 43.011 | 186 | 94 | 3 | 157 | 339 | 13 | 189 | 1.14e-45 | 155 |
| Msa0457520 | MtrunA17_Chr1g0204971 | 43.243 | 185 | 93 | 3 | 158 | 339 | 14 | 189 | 3.91e-44 | 151 |
| Msa0457520 | MtrunA17_Chr5g0394621 | 39.766 | 171 | 103 | 0 | 167 | 337 | 17 | 187 | 8.93e-42 | 145 |
| Msa0457520 | MtrunA17_Chr5g0394631 | 40.964 | 166 | 98 | 0 | 166 | 331 | 16 | 181 | 3.35e-39 | 144 |
| Msa0457520 | MtrunA17_Chr5g0394631 | 38.860 | 193 | 112 | 4 | 148 | 337 | 209 | 398 | 6.39e-35 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457520 | AT5G58740.1 | 69.811 | 159 | 19 | 1 | 1 | 159 | 1 | 130 | 1.08e-73 | 226 |
| Msa0457520 | AT2G32030.1 | 47.337 | 169 | 82 | 2 | 171 | 338 | 24 | 186 | 9.75e-55 | 179 |
| Msa0457520 | AT3G22560.1 | 49.714 | 175 | 83 | 3 | 165 | 337 | 1 | 172 | 3.33e-52 | 172 |
| Msa0457520 | AT2G32020.1 | 46.471 | 170 | 84 | 2 | 170 | 338 | 18 | 181 | 1.72e-48 | 162 |
Find 112 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTGACCTTGACCTAATA+TGG | 0.170521 | 3_3:+52481479 | None:intergenic |
| TGCTTTAGCTGCTAACTATT+GGG | 0.244053 | 3_3:-52479438 | Msa0457520:CDS |
| GTAAATATTGACCTCATCTA+AGG | 0.269697 | 3_3:+52483276 | None:intergenic |
| AAGTTTAATATAACCTAGTA+TGG | 0.271789 | 3_3:-52478141 | Msa0457520:three_prime_UTR |
| ATGCTTTAGCTGCTAACTAT+TGG | 0.297415 | 3_3:-52479439 | Msa0457520:CDS |
| TTTCAAGGATATCCCTGATT+TGG | 0.317746 | 3_3:-52479369 | Msa0457520:CDS |
| TGGAAAAGGTTGGGTTCCTT+AGG | 0.326822 | 3_3:-52479295 | Msa0457520:CDS |
| GCTTGTATCCTAACCAAATC+AGG | 0.336296 | 3_3:+52479356 | None:intergenic |
| ACATGGCCTTCTCCCATATT+AGG | 0.341483 | 3_3:-52481492 | Msa0457520:CDS |
| CTGAGGGTCTTGGAAAAGGT+TGG | 0.345366 | 3_3:-52479305 | Msa0457520:CDS |
| AGTTTGATTGTCAATGCATA+TGG | 0.363098 | 3_3:+52479532 | None:intergenic |
| AATAGCTTGGAATGAACATT+AGG | 0.383397 | 3_3:+52483241 | None:intergenic |
| TGAGGGTCTTGGAAAAGGTT+GGG | 0.395764 | 3_3:-52479304 | Msa0457520:CDS |
| AGATGAGCGTAGTGATTTCC+TGG | 0.395903 | 3_3:+52483539 | None:intergenic |
| CAGTCCAAGCATATTGAACT+TGG | 0.399137 | 3_3:-52483205 | Msa0457520:CDS |
| AGGATATCCCTGATTTGGTT+AGG | 0.407728 | 3_3:-52479364 | Msa0457520:CDS |
| TCAAGCTTCTCTGAGGGTCT+TGG | 0.408935 | 3_3:-52479315 | Msa0457520:CDS |
| ATTAGGGTTACATTGAGAAA+TGG | 0.412790 | 3_3:+52483166 | None:intergenic |
| TTCTCTGAGGGTCTTGGAAA+AGG | 0.416298 | 3_3:-52479309 | Msa0457520:CDS |
| TCCCGATCCAAGGACCTTCA+TGG | 0.422492 | 3_3:-52478471 | Msa0457520:CDS |
| CTGAAATGAATAGCCGACTT+TGG | 0.427048 | 3_3:-52478302 | Msa0457520:three_prime_UTR |
| AATAAACTGTGTAATCCCTT+TGG | 0.427777 | 3_3:-52478378 | Msa0457520:three_prime_UTR |
| ATGTATTGAACAGGTAGAAA+TGG | 0.430944 | 3_3:+52483632 | None:intergenic |
| GATACCAAGTTCAATATGCT+TGG | 0.433465 | 3_3:+52483201 | None:intergenic |
| CTCATACAATGTTCCATACT+AGG | 0.433977 | 3_3:+52478128 | None:intergenic |
| TACAGCAACTTTCACTGCTT+GGG | 0.434215 | 3_3:+52479400 | None:intergenic |
| TTCATATCAATTTCTCCAGC+TGG | 0.435051 | 3_3:-52479503 | Msa0457520:CDS |
| GGAAAAGGTTGGGTTCCTTA+GGG | 0.443455 | 3_3:-52479294 | Msa0457520:CDS |
| AGAGATTTCAAGAGGAGGTA+AGG | 0.445199 | 3_3:-52481413 | Msa0457520:intron |
| CCCATGAAGGTCCTTGGATC+GGG | 0.445509 | 3_3:+52478470 | None:intergenic |
| TGAAATGAATAGCCGACTTT+GGG | 0.456941 | 3_3:-52478301 | Msa0457520:three_prime_UTR |
| TCAATTTCTCCAGCTGGATC+TGG | 0.461550 | 3_3:-52479497 | Msa0457520:CDS |
| CAGACATCTATGTATTGAAC+AGG | 0.470143 | 3_3:+52483623 | None:intergenic |
| GATTGCAAGCCTCGCTCCAT+TGG | 0.473293 | 3_3:+52481937 | None:intergenic |
| GGTGAGGAATGCACACATCT+TGG | 0.477512 | 3_3:+52479567 | None:intergenic |
| CATATTGAACTTGGTATCAA+AGG | 0.483096 | 3_3:-52483196 | Msa0457520:CDS |
| ATACAGCAACTTTCACTGCT+TGG | 0.488169 | 3_3:+52479399 | None:intergenic |
| AAAGAAGAATCTGTCTTCAC+AGG | 0.490222 | 3_3:+52483039 | None:intergenic |
| AAAATAAGCATTTGTTTACC+AGG | 0.494098 | 3_3:-52483557 | Msa0457520:five_prime_UTR |
| CAACTTGTAATATCAACCCT+TGG | 0.497463 | 3_3:+52483580 | None:intergenic |
| AATCGTACAGTAAAATAGCT+TGG | 0.501286 | 3_3:+52483228 | None:intergenic |
| ATTCCACCCATGAAGGTCCT+TGG | 0.502629 | 3_3:+52478464 | None:intergenic |
| AGAAAGTATTCGTATGTCAA+AGG | 0.504196 | 3_3:-52479260 | Msa0457520:CDS |
| TCAGATTATCATCTTACAGC+AGG | 0.506827 | 3_3:+52478403 | None:intergenic |
| GATCTGGTGATGATGATGAT+AGG | 0.507122 | 3_3:-52479481 | Msa0457520:CDS |
| ATGTGTGCATTCCTCACCCC+TGG | 0.509851 | 3_3:-52479562 | Msa0457520:CDS |
| AATGCATATGGATCGAGTCC+AGG | 0.509920 | 3_3:+52479544 | None:intergenic |
| GAAAGTATTCGTATGTCAAA+GGG | 0.510894 | 3_3:-52479259 | Msa0457520:CDS |
| GACGATTTCATGTTAGTAGC+AGG | 0.511049 | 3_3:-52479659 | Msa0457520:CDS |
| ACCCATGAAGGTCCTTGGAT+CGG | 0.511969 | 3_3:+52478469 | None:intergenic |
| CATATGCTGCAAAATTCTGC+AGG | 0.516624 | 3_3:+52481901 | None:intergenic |
| CCCGATCCAAGGACCTTCAT+GGG | 0.522462 | 3_3:-52478470 | Msa0457520:CDS |
| AATGAGTGTCCTCTGACAAA+AGG | 0.523146 | 3_3:+52479210 | None:intergenic |
| AGGGTTACATTGAGAAATGG+AGG | 0.529746 | 3_3:+52483169 | None:intergenic |
| TTCATTCAGTATACGAGCTA+TGG | 0.532858 | 3_3:-52479732 | Msa0457520:intron |
| AACTGACCTTGACCTAATAT+GGG | 0.540070 | 3_3:+52481480 | None:intergenic |
| ATGGATCGAGTCCAGGGGTG+AGG | 0.540320 | 3_3:+52479551 | None:intergenic |
| GCTGCTAACTATTGGGGTCA+AGG | 0.542202 | 3_3:-52479431 | Msa0457520:CDS |
| TGCATTGACAATCAAACTAT+CGG | 0.542819 | 3_3:-52479527 | Msa0457520:CDS |
| CATATTAGGTCAAGGTCAGT+TGG | 0.544512 | 3_3:-52481478 | Msa0457520:CDS |
| GCTTTAGCTGCTAACTATTG+GGG | 0.545318 | 3_3:-52479437 | Msa0457520:CDS |
| GATAGGTGTAGGGCTGAGAT+TGG | 0.546473 | 3_3:-52479464 | Msa0457520:CDS |
| GTATGTCAAAGGGAGAGTTA+AGG | 0.550149 | 3_3:-52479249 | Msa0457520:CDS |
| TGATCGGATTCCACCCATGA+AGG | 0.554220 | 3_3:+52478457 | None:intergenic |
| GTGGAAACTGTCCCGATCCA+AGG | 0.564203 | 3_3:-52478481 | Msa0457520:CDS |
| AAAGGTTGGGTTCCTTAGGG+AGG | 0.565250 | 3_3:-52479291 | Msa0457520:CDS |
| ATGCATATGGATCGAGTCCA+GGG | 0.566733 | 3_3:+52479545 | None:intergenic |
| GAAATGGAGGCATCTAAAGA+TGG | 0.571161 | 3_3:+52483648 | None:intergenic |
| AAGAAGAATCTGTCTTCACA+GGG | 0.574878 | 3_3:+52483040 | None:intergenic |
| TCATCATCACCAGATCCAGC+TGG | 0.579658 | 3_3:+52479488 | None:intergenic |
| CACTGTGCACCAATGGAGCG+AGG | 0.579955 | 3_3:-52481946 | Msa0457520:CDS |
| GAGGCGTTTCTGTTCAAGAT+CGG | 0.581122 | 3_3:+52481443 | None:intergenic |
| CTTGTATCCTAACCAAATCA+GGG | 0.587926 | 3_3:+52479357 | None:intergenic |
| GCGAGGCTTGCAATCTTCTG+AGG | 0.591771 | 3_3:-52481929 | Msa0457520:CDS |
| AGCTTGGAATGAACATTAGG+AGG | 0.592571 | 3_3:+52483244 | None:intergenic |
| TTCTGAGTATACCCTCCCTA+AGG | 0.601810 | 3_3:+52479279 | None:intergenic |
| TCTGTGTTCAGTATCGATGA+TGG | 0.602085 | 3_3:+52483498 | None:intergenic |
| AAATTAAATGGCATCAAACA+AGG | 0.604625 | 3_3:+52478349 | None:intergenic |
| AAAGAAAAGTACCGTTGTGG+AGG | 0.606940 | 3_3:+52483403 | None:intergenic |
| ACTTTGAATAAGAGAGACAA+GGG | 0.618834 | 3_3:-52481519 | Msa0457520:CDS |
| TGGAGAATCAAGCTTCTCTG+AGG | 0.619862 | 3_3:-52479322 | Msa0457520:CDS |
| AAGGTTGGGTTCCTTAGGGA+GGG | 0.621218 | 3_3:-52479290 | Msa0457520:CDS |
| TATTGAACAGGTAGAAATGG+AGG | 0.621689 | 3_3:+52483635 | None:intergenic |
| CATGCTTCAGAGATTTCAAG+AGG | 0.622637 | 3_3:-52481421 | Msa0457520:CDS |
| GTGATGATGATGATAGGTGT+AGG | 0.623007 | 3_3:-52479475 | Msa0457520:CDS |
| CCTTGACCTAATATGGGAGA+AGG | 0.625074 | 3_3:+52481486 | None:intergenic |
| CAAACAAGGAGGATACCAAA+GGG | 0.626128 | 3_3:+52478363 | None:intergenic |
| GAGTGACAAACTATACTAGA+CGG | 0.627131 | 3_3:-52479628 | Msa0457520:CDS |
| CCTTCTCCCATATTAGGTCA+AGG | 0.627679 | 3_3:-52481486 | Msa0457520:CDS |
| TGATGATGATGATAGGTGTA+GGG | 0.628441 | 3_3:-52479474 | Msa0457520:CDS |
| CCACGGAATATGCCCAAAGT+CGG | 0.631124 | 3_3:+52478289 | None:intergenic |
| TCGACGTCACTCAATTCGAA+TGG | 0.631370 | 3_3:+52479680 | None:intergenic |
| TCAAACAAGGAGGATACCAA+AGG | 0.631782 | 3_3:+52478362 | None:intergenic |
| GTGGCAAAGATCAATCTGAT+CGG | 0.631844 | 3_3:+52478441 | None:intergenic |
| CTTGAAATCTCTGAAGCATG+AGG | 0.633282 | 3_3:+52481424 | None:intergenic |
| CCGACTTTGGGCATATTCCG+TGG | 0.635808 | 3_3:-52478289 | Msa0457520:three_prime_UTR |
| ACTCAATTCGAATGGCCGCA+AGG | 0.642027 | 3_3:+52479688 | None:intergenic |
| CAGGCAAATACAAACTCTTG+TGG | 0.645731 | 3_3:+52478422 | None:intergenic |
| AGAGAGACAAGGGTCAAACA+TGG | 0.649602 | 3_3:-52481509 | Msa0457520:CDS |
| GGAGAATCAAGCTTCTCTGA+GGG | 0.652700 | 3_3:-52479321 | Msa0457520:CDS |
| GATCCAAGGACCTTCATGGG+TGG | 0.653128 | 3_3:-52478467 | Msa0457520:CDS |
| CAAAAGATTAACAAATACCA+CGG | 0.655578 | 3_3:+52478272 | None:intergenic |
| GCTTCAGAGATTTCAAGAGG+AGG | 0.661326 | 3_3:-52481418 | Msa0457520:CDS |
| ATGGGATCAAACCTTAGATG+AGG | 0.662409 | 3_3:-52483287 | Msa0457520:CDS |
| AACTTTGAATAAGAGAGACA+AGG | 0.665667 | 3_3:-52481520 | Msa0457520:CDS |
| GGAAAAGAAAAGTACCGTTG+TGG | 0.682974 | 3_3:+52483400 | None:intergenic |
| TGCATATGGATCGAGTCCAG+GGG | 0.689645 | 3_3:+52479546 | None:intergenic |
| ATACATAGATGTCTGACACG+TGG | 0.710272 | 3_3:-52483615 | Msa0457520:five_prime_UTR |
| TTAAATGGCATCAAACAAGG+AGG | 0.733135 | 3_3:+52478352 | None:intergenic |
| ACTTGTCAAGAATCACCTTG+CGG | 0.733741 | 3_3:-52479703 | Msa0457520:CDS |
| CGTCACATATTCCTCCACAA+CGG | 0.747274 | 3_3:-52483414 | Msa0457520:intron |
| AGAAGAATCTGTCTTCACAG+GGG | 0.758229 | 3_3:+52483041 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAGGTATAAAATA+TGG | + | chr3_3:52481347-52481366 | None:intergenic | 10.0% |
| !! | CATCTATAATATATAATAAT+TGG | - | chr3_3:52481624-52481643 | Msa0457520:intron | 10.0% |
| !! | TTAAATTACAAATTTACAAT+AGG | - | chr3_3:52483025-52483044 | Msa0457520:intron | 10.0% |
| !!! | TGCTTTTTAATTAAATTAAA+TGG | + | chr3_3:52483421-52483440 | None:intergenic | 10.0% |
| !! | TATGCAACAAAAAAAATTAA+AGG | + | chr3_3:52478623-52478642 | None:intergenic | 15.0% |
| !! | AATGAAATAATATGATAGTT+TGG | - | chr3_3:52478856-52478875 | Msa0457520:intron | 15.0% |
| !! | ATGAAATAATATGATAGTTT+GGG | - | chr3_3:52478857-52478876 | Msa0457520:intron | 15.0% |
| !! | ATAAGATTCAATTTAGTATT+AGG | + | chr3_3:52479476-52479495 | None:intergenic | 15.0% |
| !! | ATATCGACAATTAAAAAAAA+CGG | + | chr3_3:52481472-52481491 | None:intergenic | 15.0% |
| !! | ATAATATATAATAATTGGGT+TGG | - | chr3_3:52481629-52481648 | Msa0457520:intron | 15.0% |
| !! | TAAATCATAAACTATATATG+TGG | - | chr3_3:52481740-52481759 | Msa0457520:intron | 15.0% |
| !! | TACACTAATAATCAATTATA+TGG | - | chr3_3:52481793-52481812 | Msa0457520:intron | 15.0% |
| !!! | AACTCTTTTTTGAATATTAT+TGG | - | chr3_3:52482773-52482792 | Msa0457520:intron | 15.0% |
| !! | AAATAATGTAATGTGATTAA+TGG | + | chr3_3:52483152-52483171 | None:intergenic | 15.0% |
| !! | ATTAATCACATTACATTATT+TGG | - | chr3_3:52483151-52483170 | Msa0457520:intron | 15.0% |
| !! | TTAATCACATTACATTATTT+GGG | - | chr3_3:52483152-52483171 | Msa0457520:intron | 15.0% |
| !! | TTGATTGAATAGAAATGAAA+TGG | + | chr3_3:52478403-52478422 | None:intergenic | 20.0% |
| !! | TCATTTATGAAATAAATCAG+CGG | - | chr3_3:52478994-52479013 | Msa0457520:intron | 20.0% |
| !!! | AAATCTCATAACTGATTTAA+TGG | - | chr3_3:52479190-52479209 | Msa0457520:intron | 20.0% |
| !!! | AATCTCATAACTGATTTAAT+GGG | - | chr3_3:52479191-52479210 | Msa0457520:intron | 20.0% |
| !! | TTGTTTAATAGTGTAAATGT+TGG | - | chr3_3:52479516-52479535 | Msa0457520:CDS | 20.0% |
| !! | TATCCAGAGTATATTTATTA+TGG | - | chr3_3:52481314-52481333 | Msa0457520:intron | 20.0% |
| !!! | CAAGTTTGTTTGAAAAAAAA+AGG | + | chr3_3:52481359-52481378 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTCAAACAAACT+TGG | - | chr3_3:52481357-52481376 | Msa0457520:intron | 20.0% |
| !! | ATTATGTTAAACTATTACCA+AGG | + | chr3_3:52481668-52481687 | None:intergenic | 20.0% |
| !! | CCTTATCTTCAATATATATA+TGG | + | chr3_3:52481767-52481786 | None:intergenic | 20.0% |
| !! | CCATATATATATTGAAGATA+AGG | - | chr3_3:52481764-52481783 | Msa0457520:intron | 20.0% |
| !! | TAATAATCAATTATATGGTG+AGG | - | chr3_3:52481798-52481817 | Msa0457520:intron | 20.0% |
| !!! | AAAATATTCTTGGATTAGTT+GGG | + | chr3_3:52481870-52481889 | None:intergenic | 20.0% |
| !! | AATCTTGTACAAAATATTCT+TGG | + | chr3_3:52481880-52481899 | None:intergenic | 20.0% |
| !! | AGTGAATAAAAGTAAACAAT+AGG | + | chr3_3:52481906-52481925 | None:intergenic | 20.0% |
| !! | GTATTAATAAAATGGAGTAT+GGG | + | chr3_3:52481931-52481950 | None:intergenic | 20.0% |
| !! | TGTATTAATAAAATGGAGTA+TGG | + | chr3_3:52481932-52481951 | None:intergenic | 20.0% |
| !!! | TCTTTTTTCTTTCTTTCTTT+GGG | - | chr3_3:52482612-52482631 | Msa0457520:intron | 20.0% |
| !! | AGAAGATACAAACAATAAAT+GGG | + | chr3_3:52482739-52482758 | None:intergenic | 20.0% |
| !!! | ATTTTTAACTTTCTTGATGA+TGG | - | chr3_3:52482899-52482918 | Msa0457520:intron | 20.0% |
| !!! | TTTTTAACTTTCTTGATGAT+GGG | - | chr3_3:52482900-52482919 | Msa0457520:intron | 20.0% |
| !!! | ATCAAAAAGACTTTTTTTCT+GGG | + | chr3_3:52483004-52483023 | None:intergenic | 20.0% |
| !!! | ATGTACATATCTAACTTTTA+AGG | + | chr3_3:52483523-52483542 | None:intergenic | 20.0% |
| !! | AAGTTTAATATAACCTAGTA+TGG | - | chr3_3:52483614-52483633 | Msa0457520:five_prime_UTR | 20.0% |
| ! | AAAATAAGCATTTGTTTACC+AGG | - | chr3_3:52478198-52478217 | Msa0457520:three_prime_UTR | 25.0% |
| ! | TACAAAAATGGCAGAAAAAT+TGG | - | chr3_3:52478307-52478326 | Msa0457520:three_prime_UTR | 25.0% |
| ! | TGAATAGAAATGAAATGGAA+TGG | + | chr3_3:52478398-52478417 | None:intergenic | 25.0% |
| ! | AACTCATTCTTCTTCAATTT+AGG | - | chr3_3:52478430-52478449 | Msa0457520:CDS | 25.0% |
| ! | ATTAAAGGAGAGTGAAATTA+GGG | + | chr3_3:52478608-52478627 | None:intergenic | 25.0% |
| ! | AATTAAAGGAGAGTGAAATT+AGG | + | chr3_3:52478609-52478628 | None:intergenic | 25.0% |
| !!! | AAGTTGGTTTTCGAATTAAT+TGG | - | chr3_3:52478807-52478826 | Msa0457520:intron | 25.0% |
| !!! | AGTTGGTTTTCGAATTAATT+GGG | - | chr3_3:52478808-52478827 | Msa0457520:intron | 25.0% |
| !! | ATAATATGATAGTTTGGGTT+TGG | - | chr3_3:52478862-52478881 | Msa0457520:intron | 25.0% |
| !!! | TCGTTGGTTTTTTCTTATAA+AGG | - | chr3_3:52478896-52478915 | Msa0457520:intron | 25.0% |
| ! | TTGATTATGAGAAAGTTGTT+TGG | - | chr3_3:52478921-52478940 | Msa0457520:intron | 25.0% |
| ! | TGATTATGAGAAAGTTGTTT+GGG | - | chr3_3:52478922-52478941 | Msa0457520:intron | 25.0% |
| ! | TAAATGAAATCCTCTTGATT+TGG | + | chr3_3:52478981-52479000 | None:intergenic | 25.0% |
| !!! | GTTTTGAGAGAATCTATAAA+AGG | - | chr3_3:52479075-52479094 | Msa0457520:intron | 25.0% |
| ! | AGAATCTATAAAAGGAAACA+AGG | - | chr3_3:52479083-52479102 | Msa0457520:intron | 25.0% |
| ! | GAATCTATAAAAGGAAACAA+GGG | - | chr3_3:52479084-52479103 | Msa0457520:intron | 25.0% |
| !! | ATCTCATAACTGATTTAATG+GGG | - | chr3_3:52479192-52479211 | Msa0457520:intron | 25.0% |
| !! | AAAGTTCAGTATTGAAATTC+AGG | - | chr3_3:52479258-52479277 | Msa0457520:CDS | 25.0% |
| ! | GTAAAATTCTGATGAGAAAA+GGG | + | chr3_3:52479444-52479463 | None:intergenic | 25.0% |
| ! | AGTAAAATTCTGATGAGAAA+AGG | + | chr3_3:52479445-52479464 | None:intergenic | 25.0% |
| ! | ACTAAATTGAATCTTATCAG+TGG | - | chr3_3:52479479-52479498 | Msa0457520:CDS | 25.0% |
| ! | CTAAATTGAATCTTATCAGT+GGG | - | chr3_3:52479480-52479499 | Msa0457520:CDS | 25.0% |
| ! | TAAATTGAATCTTATCAGTG+GGG | - | chr3_3:52479481-52479500 | Msa0457520:CDS | 25.0% |
| !!! | TGTTCTGAGAATTTTTTTAG+AGG | - | chr3_3:52479574-52479593 | Msa0457520:CDS | 25.0% |
| !!! | GAATTTTTTTAGAGGTGTAT+TGG | - | chr3_3:52479582-52479601 | Msa0457520:CDS | 25.0% |
| ! | TGAACTTAAAATTACAGAAG+AGG | + | chr3_3:52479711-52479730 | None:intergenic | 25.0% |
| !!! | TACTTTGTTTTATGTGGAAA+AGG | - | chr3_3:52479990-52480009 | Msa0457520:intron | 25.0% |
| !! | ATGTAATATTTTTCGTGTGA+TGG | - | chr3_3:52480375-52480394 | Msa0457520:intron | 25.0% |
| !! | TGTAATATTTTTCGTGTGAT+GGG | - | chr3_3:52480376-52480395 | Msa0457520:intron | 25.0% |
| ! | AAGACATCATAAAATGCAAA+TGG | + | chr3_3:52480416-52480435 | None:intergenic | 25.0% |
| !!! | CAAAATCAAGTTTTAGACAA+AGG | + | chr3_3:52480462-52480481 | None:intergenic | 25.0% |
| !!! | CTTTGTCTAAAACTTGATTT+TGG | - | chr3_3:52480460-52480479 | Msa0457520:intron | 25.0% |
| ! | ACAAATTGTTATCATCACAA+AGG | + | chr3_3:52480553-52480572 | None:intergenic | 25.0% |
| ! | GTGAGAAATATAGGAAAAAA+TGG | - | chr3_3:52480623-52480642 | Msa0457520:intron | 25.0% |
| !!! | TTGATAGAGTATTGTTTTAG+AGG | - | chr3_3:52480664-52480683 | Msa0457520:intron | 25.0% |
| ! | AAAAAAAAAAAAGGAGCAAG+TGG | + | chr3_3:52480895-52480914 | None:intergenic | 25.0% |
| ! | CATCCATAATAAATATACTC+TGG | + | chr3_3:52481320-52481339 | None:intergenic | 25.0% |
| !!! | CAAAATATTCTTGGATTAGT+TGG | + | chr3_3:52481871-52481890 | None:intergenic | 25.0% |
| ! | GAATAAAAGTAAACAATAGG+CGG | + | chr3_3:52481903-52481922 | None:intergenic | 25.0% |
| ! | CAAAGAAAGAAAGAAAAAAG+AGG | + | chr3_3:52482613-52482632 | None:intergenic | 25.0% |
| !!! | CTCTTTTTTCTTTCTTTCTT+TGG | - | chr3_3:52482611-52482630 | Msa0457520:intron | 25.0% |
| ! | GAGAAGATACAAACAATAAA+TGG | + | chr3_3:52482740-52482759 | None:intergenic | 25.0% |
| ! | AAAAAAGAGTTGACAATTGT+AGG | + | chr3_3:52482764-52482783 | None:intergenic | 25.0% |
| !!! | TCAAAAAGACTTTTTTTCTG+GGG | + | chr3_3:52483003-52483022 | None:intergenic | 25.0% |
| !!! | CATCAAAAAGACTTTTTTTC+TGG | + | chr3_3:52483005-52483024 | None:intergenic | 25.0% |
| !! | TACATTATTTGGGTTAAAGT+TGG | - | chr3_3:52483162-52483181 | Msa0457520:intron | 25.0% |
| ! | TCAATAAGAATAGTAGATAG+AGG | + | chr3_3:52483200-52483219 | None:intergenic | 25.0% |
| ! | AAATTAAATGGCATCAAACA+AGG | + | chr3_3:52483409-52483428 | None:intergenic | 25.0% |
| ! | CAAAAGATTAACAAATACCA+CGG | + | chr3_3:52483486-52483505 | None:intergenic | 25.0% |
| ATGTATTGAACAGGTAGAAA+TGG | + | chr3_3:52478126-52478145 | None:intergenic | 30.0% | |
| GTGGAAAAAACAAAAACCAA+GGG | - | chr3_3:52478159-52478178 | Msa0457520:three_prime_UTR | 30.0% | |
| CAAAGACGAGTTTACAAAAA+TGG | - | chr3_3:52478295-52478314 | Msa0457520:three_prime_UTR | 30.0% | |
| ATGGAATGAAATTGGAAAGA+TGG | + | chr3_3:52478379-52478398 | None:intergenic | 30.0% | |
| GAAATGGAATGGAATGAAAT+TGG | + | chr3_3:52478387-52478406 | None:intergenic | 30.0% | |
| !! | TAGGTCAAAAAGTGTTTGAA+TGG | - | chr3_3:52478449-52478468 | Msa0457520:CDS | 30.0% |
| !! | AGGTCAAAAAGTGTTTGAAT+GGG | - | chr3_3:52478450-52478469 | Msa0457520:CDS | 30.0% |
| GTAAATATTGACCTCATCTA+AGG | + | chr3_3:52478482-52478501 | None:intergenic | 30.0% | |
| AATAGCTTGGAATGAACATT+AGG | + | chr3_3:52478517-52478536 | None:intergenic | 30.0% | |
| AATCGTACAGTAAAATAGCT+TGG | + | chr3_3:52478530-52478549 | None:intergenic | 30.0% | |
| CATATTGAACTTGGTATCAA+AGG | - | chr3_3:52478559-52478578 | Msa0457520:intron | 30.0% | |
| ATTAGGGTTACATTGAGAAA+TGG | + | chr3_3:52478592-52478611 | None:intergenic | 30.0% | |
| ! | TGAAGACAGATTCTTCTTTT+TGG | - | chr3_3:52478720-52478739 | Msa0457520:intron | 30.0% |
| ! | GATTCTTCTTTTTGGACTTT+AGG | - | chr3_3:52478728-52478747 | Msa0457520:intron | 30.0% |
| !!! | TGACTGTTTTTGTGTTAAGT+TGG | - | chr3_3:52478791-52478810 | Msa0457520:intron | 30.0% |
| !!! | GTTGGTTTTCGAATTAATTG+GGG | - | chr3_3:52478809-52478828 | Msa0457520:intron | 30.0% |
| ! | TTTGGTTAAGTTTAGTTCGT+TGG | - | chr3_3:52478880-52478899 | Msa0457520:intron | 30.0% |
| GATTATGAGAAAGTTGTTTG+GGG | - | chr3_3:52478923-52478942 | Msa0457520:intron | 30.0% | |
| ATTATGAGAAAGTTGTTTGG+GGG | - | chr3_3:52478924-52478943 | Msa0457520:intron | 30.0% | |
| GTTCTTAAAACCAAATCAAG+AGG | - | chr3_3:52478968-52478987 | Msa0457520:intron | 30.0% | |
| GAATCAAAACAATAATGCAG+AGG | - | chr3_3:52479121-52479140 | Msa0457520:intron | 30.0% | |
| ! | TCTCATAACTGATTTAATGG+GGG | - | chr3_3:52479193-52479212 | Msa0457520:intron | 30.0% |
| ! | ATCTGATGGATATATAGAGA+AGG | - | chr3_3:52479235-52479254 | Msa0457520:CDS | 30.0% |
| CAGAAAAATAAAGATAGCCT+AGG | + | chr3_3:52479335-52479354 | None:intergenic | 30.0% | |
| TGATTACAATGGTTGAACAA+CGG | + | chr3_3:52479371-52479390 | None:intergenic | 30.0% | |
| ! | GATCTAACTGTTGATTACAA+TGG | + | chr3_3:52479382-52479401 | None:intergenic | 30.0% |
| AATCCAGTTAGAGTTCAAAT+GGG | + | chr3_3:52479404-52479423 | None:intergenic | 30.0% | |
| TAATCCAGTTAGAGTTCAAA+TGG | + | chr3_3:52479405-52479424 | None:intergenic | 30.0% | |
| !! | TTTTTAGAGGTGTATTGGAA+TGG | - | chr3_3:52479587-52479606 | Msa0457520:CDS | 30.0% |
| !!! | CTCTGTTACTTTGTTTTATG+TGG | - | chr3_3:52479984-52480003 | Msa0457520:intron | 30.0% |
| ! | TTTTATGTGGAAAAGGAAAC+AGG | - | chr3_3:52479997-52480016 | Msa0457520:intron | 30.0% |
| ! | TAGGAAGCTTTGTGTATTTA+AGG | - | chr3_3:52480027-52480046 | Msa0457520:intron | 30.0% |
| ! | GCTTTGTGTATTTAAGGTTT+AGG | - | chr3_3:52480033-52480052 | Msa0457520:intron | 30.0% |
| GGTGATGATTAATGTTGTAA+TGG | - | chr3_3:52480054-52480073 | Msa0457520:intron | 30.0% | |
| GTGTACAAAGTGTAGATAAA+AGG | + | chr3_3:52480102-52480121 | None:intergenic | 30.0% | |
| TAACAACTACACTAAGTACA+AGG | + | chr3_3:52480124-52480143 | None:intergenic | 30.0% | |
| !!! | AACAGAACTTTTTTTCGAGA+AGG | + | chr3_3:52480160-52480179 | None:intergenic | 30.0% |
| AACTTTGAATAAGAGAGACA+AGG | - | chr3_3:52480235-52480254 | Msa0457520:intron | 30.0% | |
| ACTTTGAATAAGAGAGACAA+GGG | - | chr3_3:52480236-52480255 | Msa0457520:intron | 30.0% | |
| !!! | AGTTTTAGACAAAGGATGTT+GGG | + | chr3_3:52480454-52480473 | None:intergenic | 30.0% |
| !!! | AAGTTTTAGACAAAGGATGT+TGG | + | chr3_3:52480455-52480474 | None:intergenic | 30.0% |
| !! | AAAACTTGATTTTGGTACTC+TGG | - | chr3_3:52480468-52480487 | Msa0457520:intron | 30.0% |
| TTGTATACTTAAGCTCTGTT+TGG | - | chr3_3:52480569-52480588 | Msa0457520:intron | 30.0% | |
| TTATGAGTGGTGAGAAATAT+AGG | - | chr3_3:52480614-52480633 | Msa0457520:intron | 30.0% | |
| ATACAAAATACCCCTAATCT+GGG | + | chr3_3:52480824-52480843 | None:intergenic | 30.0% | |
| AATACAAAATACCCCTAATC+TGG | + | chr3_3:52480825-52480844 | None:intergenic | 30.0% | |
| !!! | AGAATAGAGAGTTTTGGAAA+GGG | + | chr3_3:52480870-52480889 | None:intergenic | 30.0% |
| !!! | AAGAATAGAGAGTTTTGGAA+AGG | + | chr3_3:52480871-52480890 | None:intergenic | 30.0% |
| AAATAAAGCCTTAAGGACTA+AGG | - | chr3_3:52480953-52480972 | Msa0457520:intron | 30.0% | |
| TCATATTCTTCCATTTCGTA+TGG | + | chr3_3:52481070-52481089 | None:intergenic | 30.0% | |
| ! | CATTTTGTTAACCACATGTA+TGG | + | chr3_3:52481116-52481135 | None:intergenic | 30.0% |
| CATACATGTGGTTAACAAAA+TGG | - | chr3_3:52481114-52481133 | Msa0457520:intron | 30.0% | |
| TGCTAAAGCTTATGAAAGAA+AGG | + | chr3_3:52481187-52481206 | None:intergenic | 30.0% | |
| !! | CTTTAGATTTTAATCCGTCA+AGG | - | chr3_3:52481428-52481447 | Msa0457520:CDS | 30.0% |
| TGTATAATATTGACACGAGA+AGG | - | chr3_3:52481513-52481532 | Msa0457520:CDS | 30.0% | |
| GTATAATATTGACACGAGAA+GGG | - | chr3_3:52481514-52481533 | Msa0457520:CDS | 30.0% | |
| TATAATATTGACACGAGAAG+GGG | - | chr3_3:52481515-52481534 | Msa0457520:CDS | 30.0% | |
| ! | ATCTGATAATTCAATGGACT+TGG | - | chr3_3:52481538-52481557 | Msa0457520:CDS | 30.0% |
| ATGAACTTAAATTATCCGCA+AGG | + | chr3_3:52481607-52481626 | None:intergenic | 30.0% | |
| GTAGAAAAGAAACACATGAT+TGG | - | chr3_3:52481991-52482010 | Msa0457520:intron | 30.0% | |
| !!! | ACGGAAAAGTTTTGTTTCAA+GGG | - | chr3_3:52482146-52482165 | Msa0457520:intron | 30.0% |
| AGTTTGATTGTCAATGCATA+TGG | + | chr3_3:52482226-52482245 | None:intergenic | 30.0% | |
| ! | TGCATTGACAATCAAACTAT+CGG | - | chr3_3:52482228-52482247 | Msa0457520:intron | 30.0% |
| !! | AGAAAGTATTCGTATGTCAA+AGG | - | chr3_3:52482495-52482514 | Msa0457520:intron | 30.0% |
| !! | GAAAGTATTCGTATGTCAAA+GGG | - | chr3_3:52482496-52482515 | Msa0457520:intron | 30.0% |
| !!! | TATTTTTAGCCTTTTGTCAG+AGG | - | chr3_3:52482536-52482555 | Msa0457520:intron | 30.0% |
| CAAAAGGAGAATAATTTCAG+TGG | + | chr3_3:52482952-52482971 | None:intergenic | 30.0% | |
| ! | CTGAAATTATTCTCCTTTTG+AGG | - | chr3_3:52482952-52482971 | Msa0457520:intron | 30.0% |
| TCTGAATTAGTCAGTCTATT+TGG | - | chr3_3:52483050-52483069 | Msa0457520:CDS | 30.0% | |
| GTGAAGTTAATAACTGTATG+TGG | - | chr3_3:52483091-52483110 | Msa0457520:intron | 30.0% | |
| ! | TTTTCACAAGCTCAATTTAG+TGG | - | chr3_3:52483255-52483274 | Msa0457520:CDS | 30.0% |
| AATAAACTGTGTAATCCCTT+TGG | - | chr3_3:52483377-52483396 | Msa0457520:intron | 30.0% | |
| !! | AATCTTTTGATTCCCTTTGT+TGG | - | chr3_3:52483497-52483516 | Msa0457520:five_prime_UTR | 30.0% |
| !!! | TAACTTTTAAGGCCAACAAA+GGG | + | chr3_3:52483512-52483531 | None:intergenic | 30.0% |
| TATTGAACAGGTAGAAATGG+AGG | + | chr3_3:52478123-52478142 | None:intergenic | 35.0% | |
| CAGACATCTATGTATTGAAC+AGG | + | chr3_3:52478135-52478154 | None:intergenic | 35.0% | |
| CGTGGAAAAAACAAAAACCA+AGG | - | chr3_3:52478158-52478177 | Msa0457520:three_prime_UTR | 35.0% | |
| CAACTTGTAATATCAACCCT+TGG | + | chr3_3:52478178-52478197 | None:intergenic | 35.0% | |
| GATACCAAGTTCAATATGCT+TGG | + | chr3_3:52478557-52478576 | None:intergenic | 35.0% | |
| AAGAAGAATCTGTCTTCACA+GGG | + | chr3_3:52478718-52478737 | None:intergenic | 35.0% | |
| AAAGAAGAATCTGTCTTCAC+AGG | + | chr3_3:52478719-52478738 | None:intergenic | 35.0% | |
| GACAAAGATTCTATCTTGGA+AGG | - | chr3_3:52478946-52478965 | Msa0457520:intron | 35.0% | |
| GTAAGCGATAAATAGTTGGT+GGG | - | chr3_3:52479047-52479066 | Msa0457520:intron | 35.0% | |
| GGATCAAAACAATAATGCAG+AGG | - | chr3_3:52479142-52479161 | Msa0457520:intron | 35.0% | |
| ATCAGATCGAAGATCAATGA+TGG | - | chr3_3:52479623-52479642 | Msa0457520:CDS | 35.0% | |
| ! | AAGCTTTCTTTGTTTGGAAC+TGG | - | chr3_3:52479650-52479669 | Msa0457520:CDS | 35.0% |
| AACTTTACTTGATATGCCTG+TGG | - | chr3_3:52479732-52479751 | Msa0457520:intron | 35.0% | |
| ! | GAATTTTGCAGCATATGAAC+AGG | - | chr3_3:52479860-52479879 | Msa0457520:intron | 35.0% |
| !!! | GAACAGGTTTTTGGTAATTG+AGG | - | chr3_3:52479876-52479895 | Msa0457520:intron | 35.0% |
| AACTGACCTTGACCTAATAT+GGG | + | chr3_3:52480278-52480297 | None:intergenic | 35.0% | |
| !! | ATTTTTCGTGTGATGGGATT+AGG | - | chr3_3:52480382-52480401 | Msa0457520:intron | 35.0% |
| TACAAAATACCCCTAATCTG+GGG | + | chr3_3:52480823-52480842 | None:intergenic | 35.0% | |
| ! | GTGGAAAGAATAGAGAGTTT+TGG | + | chr3_3:52480876-52480895 | None:intergenic | 35.0% |
| !! | AAGGCTTTATTTGCGAGTTT+GGG | + | chr3_3:52480945-52480964 | None:intergenic | 35.0% |
| !! | TAAGGCTTTATTTGCGAGTT+TGG | + | chr3_3:52480946-52480965 | None:intergenic | 35.0% |
| AACTCGCAAATAAAGCCTTA+AGG | - | chr3_3:52480946-52480965 | Msa0457520:intron | 35.0% | |
| TTGTATTGCCTTAGTCCTTA+AGG | + | chr3_3:52480964-52480983 | None:intergenic | 35.0% | |
| !! | ATTATTTTTCATCAGCGTGC+AGG | + | chr3_3:52481007-52481026 | None:intergenic | 35.0% |
| GATGAAAACACCATACGAAA+TGG | - | chr3_3:52481057-52481076 | Msa0457520:intron | 35.0% | |
| GAAATGGAAGAATATGAACG+TGG | - | chr3_3:52481073-52481092 | Msa0457520:intron | 35.0% | |
| TGAATCGATAACCATACATG+TGG | - | chr3_3:52481102-52481121 | Msa0457520:intron | 35.0% | |
| TTCATTTGTAACAGCCTTGA+CGG | + | chr3_3:52481445-52481464 | None:intergenic | 35.0% | |
| AAGGGGATCTGATAATTCAA+TGG | - | chr3_3:52481532-52481551 | Msa0457520:CDS | 35.0% | |
| TGAAGAGATGTGTCTGAATT+TGG | - | chr3_3:52481569-52481588 | Msa0457520:intron | 35.0% | |
| !! | ATTGGGTTGGTTGTATACAA+TGG | - | chr3_3:52481642-52481661 | Msa0457520:intron | 35.0% |
| ! | AGTTGGGCAGTATTTTGTAT+TGG | + | chr3_3:52481854-52481873 | None:intergenic | 35.0% |
| GTAGTTATCCCTTCTAAACA+GGG | - | chr3_3:52481969-52481988 | Msa0457520:intron | 35.0% | |
| ! | CTTTTCTACCCTGTTTAGAA+GGG | + | chr3_3:52481980-52481999 | None:intergenic | 35.0% |
| ! | TCTTTTCTACCCTGTTTAGA+AGG | + | chr3_3:52481981-52482000 | None:intergenic | 35.0% |
| ! | GAAACACATGATTGGTTGAT+TGG | - | chr3_3:52481999-52482018 | Msa0457520:intron | 35.0% |
| TTCATTCAGTATACGAGCTA+TGG | - | chr3_3:52482023-52482042 | Msa0457520:intron | 35.0% | |
| GAGTGACAAACTATACTAGA+CGG | - | chr3_3:52482127-52482146 | Msa0457520:intron | 35.0% | |
| !!! | GACGGAAAAGTTTTGTTTCA+AGG | - | chr3_3:52482145-52482164 | Msa0457520:intron | 35.0% |
| TTCATATCAATTTCTCCAGC+TGG | - | chr3_3:52482252-52482271 | Msa0457520:intron | 35.0% | |
| ! | TGATGATGATGATAGGTGTA+GGG | - | chr3_3:52482281-52482300 | Msa0457520:intron | 35.0% |
| ATGCTTTAGCTGCTAACTAT+TGG | - | chr3_3:52482316-52482335 | Msa0457520:intron | 35.0% | |
| TGCTTTAGCTGCTAACTATT+GGG | - | chr3_3:52482317-52482336 | Msa0457520:intron | 35.0% | |
| ! | TGCTGTATCACAAGTTTTCA+AGG | - | chr3_3:52482371-52482390 | Msa0457520:intron | 35.0% |
| TTTCAAGGATATCCCTGATT+TGG | - | chr3_3:52482386-52482405 | Msa0457520:intron | 35.0% | |
| CTTGTATCCTAACCAAATCA+GGG | + | chr3_3:52482401-52482420 | None:intergenic | 35.0% | |
| !!! | GATACAAGCTTTTGTTTCTG+TGG | - | chr3_3:52482413-52482432 | Msa0457520:intron | 35.0% |
| TCATTCTCTACAGTAACCAT+AGG | - | chr3_3:52482563-52482582 | Msa0457520:intron | 35.0% | |
| CTCAAGAGATTAGAAACCTA+TGG | + | chr3_3:52482582-52482601 | None:intergenic | 35.0% | |
| ACTTCCTTCACATCTCTAAT+GGG | + | chr3_3:52482832-52482851 | None:intergenic | 35.0% | |
| !!! | AAAGACTTTTTTTCTGGGGA+GGG | + | chr3_3:52482999-52483018 | None:intergenic | 35.0% |
| !!! | AAAAGACTTTTTTTCTGGGG+AGG | + | chr3_3:52483000-52483019 | None:intergenic | 35.0% |
| ATTAGTCAGTCTATTTGGCT+CGG | - | chr3_3:52483055-52483074 | Msa0457520:CDS | 35.0% | |
| CTTGTGAAAAATCAAAACCC+GGG | + | chr3_3:52483245-52483264 | None:intergenic | 35.0% | |
| GCTTGTGAAAAATCAAAACC+CGG | + | chr3_3:52483246-52483265 | None:intergenic | 35.0% | |
| TCAGATTATCATCTTACAGC+AGG | + | chr3_3:52483355-52483374 | None:intergenic | 35.0% | |
| TTAAATGGCATCAAACAAGG+AGG | + | chr3_3:52483406-52483425 | None:intergenic | 35.0% | |
| ! | TGAAATGAATAGCCGACTTT+GGG | - | chr3_3:52483454-52483473 | Msa0457520:exon | 35.0% |
| !!! | CTAACTTTTAAGGCCAACAA+AGG | + | chr3_3:52483513-52483532 | None:intergenic | 35.0% |
| CTCATACAATGTTCCATACT+AGG | + | chr3_3:52483630-52483649 | None:intergenic | 35.0% | |
| !! | GAAATGGAGGCATCTAAAGA+TGG | + | chr3_3:52478110-52478129 | None:intergenic | 40.0% |
| ATACATAGATGTCTGACACG+TGG | - | chr3_3:52478140-52478159 | Msa0457520:three_prime_UTR | 40.0% | |
| !! | TCTGTGTTCAGTATCGATGA+TGG | + | chr3_3:52478260-52478279 | None:intergenic | 40.0% |
| AATGGCAGAAAAATTGGCAC+CGG | - | chr3_3:52478313-52478332 | Msa0457520:three_prime_UTR | 40.0% | |
| ! | AGGAATATGTGACGCTTTTC+CGG | + | chr3_3:52478335-52478354 | None:intergenic | 40.0% |
| !! | AAAGAAAAGTACCGTTGTGG+AGG | + | chr3_3:52478355-52478374 | None:intergenic | 40.0% |
| !! | GGAAAAGAAAAGTACCGTTG+TGG | + | chr3_3:52478358-52478377 | None:intergenic | 40.0% |
| ATGGGATCAAACCTTAGATG+AGG | - | chr3_3:52478468-52478487 | Msa0457520:CDS | 40.0% | |
| AGCTTGGAATGAACATTAGG+AGG | + | chr3_3:52478514-52478533 | None:intergenic | 40.0% | |
| CAGTCCAAGCATATTGAACT+TGG | - | chr3_3:52478550-52478569 | Msa0457520:intron | 40.0% | |
| AGGGTTACATTGAGAAATGG+AGG | + | chr3_3:52478589-52478608 | None:intergenic | 40.0% | |
| AGAAGAATCTGTCTTCACAG+GGG | + | chr3_3:52478717-52478736 | None:intergenic | 40.0% | |
| TGAAATAAATCAGCGGCTTG+AGG | - | chr3_3:52479001-52479020 | Msa0457520:intron | 40.0% | |
| GGTGGTAAGCGATAAATAGT+TGG | - | chr3_3:52479043-52479062 | Msa0457520:intron | 40.0% | |
| GGTAAGCGATAAATAGTTGG+TGG | - | chr3_3:52479046-52479065 | Msa0457520:intron | 40.0% | |
| ! | CATAACTGATTTAATGGGGG+AGG | - | chr3_3:52479196-52479215 | Msa0457520:intron | 40.0% |
| GATCCCATTTGAACTCTAAC+TGG | - | chr3_3:52479398-52479417 | Msa0457520:CDS | 40.0% | |
| TGAATCTTATCAGTGGGGAA+CGG | - | chr3_3:52479486-52479505 | Msa0457520:CDS | 40.0% | |
| AGGTGTATTGGAATGGTTGT+AGG | - | chr3_3:52479594-52479613 | Msa0457520:CDS | 40.0% | |
| GGTGCTAAGCTTTCTTTGTT+TGG | - | chr3_3:52479644-52479663 | Msa0457520:CDS | 40.0% | |
| AAACCACCTCAAGGATACAA+AGG | + | chr3_3:52479762-52479781 | None:intergenic | 40.0% | |
| TTTGTATCCTTGAGGTGGTT+TGG | - | chr3_3:52479761-52479780 | Msa0457520:intron | 40.0% | |
| ! | AATTTTGCACTGTGCACCAA+TGG | - | chr3_3:52479802-52479821 | Msa0457520:intron | 40.0% |
| CATATGCTGCAAAATTCTGC+AGG | + | chr3_3:52479857-52479876 | None:intergenic | 40.0% | |
| ! | GCAGCATATGAACAGGTTTT+TGG | - | chr3_3:52479867-52479886 | Msa0457520:intron | 40.0% |
| TATGTGGAAAAGGAAACAGG+TGG | - | chr3_3:52480000-52480019 | Msa0457520:intron | 40.0% | |
| AAAGGAAACAGGTGGTGATT+AGG | - | chr3_3:52480008-52480027 | Msa0457520:intron | 40.0% | |
| ! | TTTTCGAACTTGAACTGCAG+AGG | - | chr3_3:52480196-52480215 | Msa0457520:intron | 40.0% |
| CAACTGACCTTGACCTAATA+TGG | + | chr3_3:52480279-52480298 | None:intergenic | 40.0% | |
| CATATTAGGTCAAGGTCAGT+TGG | - | chr3_3:52480277-52480296 | Msa0457520:intron | 40.0% | |
| !! | CTTGAAATCTCTGAAGCATG+AGG | + | chr3_3:52480334-52480353 | None:intergenic | 40.0% |
| CATGCTTCAGAGATTTCAAG+AGG | - | chr3_3:52480334-52480353 | Msa0457520:intron | 40.0% | |
| AGAGATTTCAAGAGGAGGTA+AGG | - | chr3_3:52480342-52480361 | Msa0457520:intron | 40.0% | |
| TGGAACTCAAGATGGTATAG+CGG | + | chr3_3:52480518-52480537 | None:intergenic | 40.0% | |
| AACGTAACTGGAACTCAAGA+TGG | + | chr3_3:52480526-52480545 | None:intergenic | 40.0% | |
| TTAAGCTCTGTTTGGCAGTT+TGG | - | chr3_3:52480577-52480596 | Msa0457520:intron | 40.0% | |
| !! | GGATTTTAGAGGGTTTCAGA+TGG | + | chr3_3:52480776-52480795 | None:intergenic | 40.0% |
| ! | TACTGGAGGAGGATTTTAGA+GGG | + | chr3_3:52480786-52480805 | None:intergenic | 40.0% |
| ! | ATACTGGAGGAGGATTTTAG+AGG | + | chr3_3:52480787-52480806 | None:intergenic | 40.0% |
| CTCAAAACTTATACTGGAGG+AGG | + | chr3_3:52480797-52480816 | None:intergenic | 40.0% | |
| GAGCTCAAAACTTATACTGG+AGG | + | chr3_3:52480800-52480819 | None:intergenic | 40.0% | |
| ACAAAATACCCCTAATCTGG+GGG | + | chr3_3:52480822-52480841 | None:intergenic | 40.0% | |
| !!! | GAGAGTTTTGGAAAGGGAAA+GGG | + | chr3_3:52480864-52480883 | None:intergenic | 40.0% |
| !!! | AGAGAGTTTTGGAAAGGGAA+AGG | + | chr3_3:52480865-52480884 | None:intergenic | 40.0% |
| !! | AGGCTTTATTTGCGAGTTTG+GGG | + | chr3_3:52480944-52480963 | None:intergenic | 40.0% |
| TGAGGTGGCATATTGTGATT+AGG | + | chr3_3:52481144-52481163 | None:intergenic | 40.0% | |
| AGACAGTGAAGAAAATGAGG+TGG | + | chr3_3:52481159-52481178 | None:intergenic | 40.0% | |
| GCAAGACAGTGAAGAAAATG+AGG | + | chr3_3:52481162-52481181 | None:intergenic | 40.0% | |
| ACAAACTTGGTCAAGACACA+AGG | - | chr3_3:52481370-52481389 | Msa0457520:intron | 40.0% | |
| TGGTTGATTGTAGTTCCTTG+CGG | - | chr3_3:52481589-52481608 | Msa0457520:intron | 40.0% | |
| TTGGTTGTATACAATGGCCT+TGG | - | chr3_3:52481648-52481667 | Msa0457520:intron | 40.0% | |
| CAATTATATGGTGAGGTGAC+AGG | - | chr3_3:52481805-52481824 | Msa0457520:intron | 40.0% | |
| GGTAGTTATCCCTTCTAAAC+AGG | - | chr3_3:52481968-52481987 | Msa0457520:intron | 40.0% | |
| ACTTGTCAAGAATCACCTTG+CGG | - | chr3_3:52482052-52482071 | Msa0457520:intron | 40.0% | |
| GACGATTTCATGTTAGTAGC+AGG | - | chr3_3:52482096-52482115 | Msa0457520:intron | 40.0% | |
| ! | GATCTGGTGATGATGATGAT+AGG | - | chr3_3:52482274-52482293 | Msa0457520:intron | 40.0% |
| ! | GTGATGATGATGATAGGTGT+AGG | - | chr3_3:52482280-52482299 | Msa0457520:intron | 40.0% |
| GCTTTAGCTGCTAACTATTG+GGG | - | chr3_3:52482318-52482337 | Msa0457520:intron | 40.0% | |
| TACAGCAACTTTCACTGCTT+GGG | + | chr3_3:52482358-52482377 | None:intergenic | 40.0% | |
| ATACAGCAACTTTCACTGCT+TGG | + | chr3_3:52482359-52482378 | None:intergenic | 40.0% | |
| !! | AGGATATCCCTGATTTGGTT+AGG | - | chr3_3:52482391-52482410 | Msa0457520:intron | 40.0% |
| GCTTGTATCCTAACCAAATC+AGG | + | chr3_3:52482402-52482421 | None:intergenic | 40.0% | |
| GTATGTCAAAGGGAGAGTTA+AGG | - | chr3_3:52482506-52482525 | Msa0457520:intron | 40.0% | |
| AATGAGTGTCCTCTGACAAA+AGG | + | chr3_3:52482548-52482567 | None:intergenic | 40.0% | |
| CTTTCTTTCTTTGGGTGTGT+TGG | - | chr3_3:52482620-52482639 | Msa0457520:intron | 40.0% | |
| ! | AGAGACGGTTGATGTTAAGA+TGG | - | chr3_3:52482657-52482676 | Msa0457520:intron | 40.0% |
| TGTTCCCATTAGAGATGTGA+AGG | - | chr3_3:52482825-52482844 | Msa0457520:intron | 40.0% | |
| GACTTCCTTCACATCTCTAA+TGG | + | chr3_3:52482833-52482852 | None:intergenic | 40.0% | |
| AACCAGCAATTCACCTCAAA+AGG | + | chr3_3:52482968-52482987 | None:intergenic | 40.0% | |
| ACTGTATGTGGCAACAGATA+TGG | - | chr3_3:52483103-52483122 | Msa0457520:intron | 40.0% | |
| GTGGCAAAGATCAATCTGAT+CGG | + | chr3_3:52483317-52483336 | None:intergenic | 40.0% | |
| CAGGCAAATACAAACTCTTG+TGG | + | chr3_3:52483336-52483355 | None:intergenic | 40.0% | |
| CAAACAAGGAGGATACCAAA+GGG | + | chr3_3:52483395-52483414 | None:intergenic | 40.0% | |
| TCAAACAAGGAGGATACCAA+AGG | + | chr3_3:52483396-52483415 | None:intergenic | 40.0% | |
| ! | CTGAAATGAATAGCCGACTT+TGG | - | chr3_3:52483453-52483472 | Msa0457520:exon | 40.0% |
| AGATGAGCGTAGTGATTTCC+TGG | + | chr3_3:52478219-52478238 | None:intergenic | 45.0% | |
| CGTCACATATTCCTCCACAA+CGG | - | chr3_3:52478341-52478360 | Msa0457520:three_prime_UTR | 45.0% | |
| GGGGGACAAAGATTCTATCT+TGG | - | chr3_3:52478942-52478961 | Msa0457520:intron | 45.0% | |
| TGAGGATCCACTGAGTTGTT+TGG | - | chr3_3:52479019-52479038 | Msa0457520:intron | 45.0% | |
| GAGGATCCACTGAGTTGTTT+GGG | - | chr3_3:52479020-52479039 | Msa0457520:intron | 45.0% | |
| AGGATCCACTGAGTTGTTTG+GGG | - | chr3_3:52479021-52479040 | Msa0457520:intron | 45.0% | |
| CATGATTAGTGGGGATCTGA+TGG | - | chr3_3:52479221-52479240 | Msa0457520:CDS | 45.0% | |
| AGTACGTAGTCTCACTACAC+TGG | - | chr3_3:52479286-52479305 | Msa0457520:CDS | 45.0% | |
| GTACGTAGTCTCACTACACT+GGG | - | chr3_3:52479287-52479306 | Msa0457520:CDS | 45.0% | |
| TCACTACACTGGGAGATTCT+AGG | - | chr3_3:52479297-52479316 | Msa0457520:CDS | 45.0% | |
| CTAGGTGTCTCGAATTACCT+AGG | - | chr3_3:52479315-52479334 | Msa0457520:CDS | 45.0% | |
| !! | ATGTTGGAGCGTTTTGAACC+TGG | - | chr3_3:52479532-52479551 | Msa0457520:CDS | 45.0% |
| CTCAAGTGCTAGAGAGATTC+TGG | - | chr3_3:52479681-52479700 | Msa0457520:CDS | 45.0% | |
| ! | ATCCTTGAGGTGGTTTGGAT+TGG | - | chr3_3:52479766-52479785 | Msa0457520:intron | 45.0% |
| ATCCAATCCAAACCACCTCA+AGG | + | chr3_3:52479771-52479790 | None:intergenic | 45.0% | |
| GTAATTGAGGTCCAGTCTTG+TGG | - | chr3_3:52479889-52479908 | Msa0457520:intron | 45.0% | |
| GGATTATAGCGAGCTAGTAC+AGG | + | chr3_3:52480081-52480100 | None:intergenic | 45.0% | |
| AGAGAGACAAGGGTCAAACA+TGG | - | chr3_3:52480246-52480265 | Msa0457520:intron | 45.0% | |
| ACATGGCCTTCTCCCATATT+AGG | - | chr3_3:52480263-52480282 | Msa0457520:intron | 45.0% | |
| CCTTGACCTAATATGGGAGA+AGG | + | chr3_3:52480272-52480291 | None:intergenic | 45.0% | |
| CCTTCTCCCATATTAGGTCA+AGG | - | chr3_3:52480269-52480288 | Msa0457520:intron | 45.0% | |
| ! | GAGGCGTTTCTGTTCAAGAT+CGG | + | chr3_3:52480315-52480334 | None:intergenic | 45.0% |
| GCTTCAGAGATTTCAAGAGG+AGG | - | chr3_3:52480337-52480356 | Msa0457520:intron | 45.0% | |
| ! | GGTATAGCGGGAAATGAACA+GGG | + | chr3_3:52480505-52480524 | None:intergenic | 45.0% |
| ! | TGGTATAGCGGGAAATGAAC+AGG | + | chr3_3:52480506-52480525 | None:intergenic | 45.0% |
| GGAACTCAAGATGGTATAGC+GGG | + | chr3_3:52480517-52480536 | None:intergenic | 45.0% | |
| CACAAAGGAACGAACGTAAC+TGG | + | chr3_3:52480538-52480557 | None:intergenic | 45.0% | |
| GGGGAGCTCAAAACTTATAC+TGG | + | chr3_3:52480803-52480822 | None:intergenic | 45.0% | |
| ! | TTTTGAGCTCCCCCAGATTA+GGG | - | chr3_3:52480810-52480829 | Msa0457520:intron | 45.0% |
| !! | GCTTTATTTGCGAGTTTGGG+GGG | + | chr3_3:52480942-52480961 | None:intergenic | 45.0% |
| !! | GGCTTTATTTGCGAGTTTGG+GGG | + | chr3_3:52480943-52480962 | None:intergenic | 45.0% |
| CATCTGTTCATCTAGCTGCT+AGG | - | chr3_3:52481278-52481297 | Msa0457520:intron | 45.0% | |
| TCGACGTCACTCAATTCGAA+TGG | + | chr3_3:52482078-52482097 | None:intergenic | 45.0% | |
| ATGCATATGGATCGAGTCCA+GGG | + | chr3_3:52482213-52482232 | None:intergenic | 45.0% | |
| AATGCATATGGATCGAGTCC+AGG | + | chr3_3:52482214-52482233 | None:intergenic | 45.0% | |
| TCAATTTCTCCAGCTGGATC+TGG | - | chr3_3:52482258-52482277 | Msa0457520:intron | 45.0% | |
| TGGAGAATCAAGCTTCTCTG+AGG | - | chr3_3:52482433-52482452 | Msa0457520:intron | 45.0% | |
| GGAGAATCAAGCTTCTCTGA+GGG | - | chr3_3:52482434-52482453 | Msa0457520:intron | 45.0% | |
| ! | TTCTCTGAGGGTCTTGGAAA+AGG | - | chr3_3:52482446-52482465 | Msa0457520:intron | 45.0% |
| TGAGGGTCTTGGAAAAGGTT+GGG | - | chr3_3:52482451-52482470 | Msa0457520:intron | 45.0% | |
| TGGAAAAGGTTGGGTTCCTT+AGG | - | chr3_3:52482460-52482479 | Msa0457520:intron | 45.0% | |
| GGAAAAGGTTGGGTTCCTTA+GGG | - | chr3_3:52482461-52482480 | Msa0457520:intron | 45.0% | |
| TTCTGAGTATACCCTCCCTA+AGG | + | chr3_3:52482479-52482498 | None:intergenic | 45.0% | |
| ! | TTTTGTGCAGTCTGGCAAGT+TGG | - | chr3_3:52482707-52482726 | Msa0457520:intron | 45.0% |
| CATCTCTAATGGGAACAGCA+TGG | + | chr3_3:52482822-52482841 | None:intergenic | 45.0% | |
| !!! | CTCCTTTTGAGGTGAATTGC+TGG | - | chr3_3:52482963-52482982 | Msa0457520:intron | 45.0% |
| !! | TTTGAAAAAAAAAAAAAAAA+AGG | + | chr3_3:52480904-52480923 | None:intergenic | 5.0% |
| !! | ATCTATAATATATAATAATT+GGG | - | chr3_3:52481625-52481644 | Msa0457520:intron | 5.0% |
| !! | AAAATAATGTATTAATAAAA+TGG | + | chr3_3:52481939-52481958 | None:intergenic | 5.0% |
| !!! | ATACATTATTTTAATAAATA+AGG | - | chr3_3:52481947-52481966 | Msa0457520:CDS | 5.0% |
| GGATCCACTGAGTTGTTTGG+GGG | - | chr3_3:52479022-52479041 | Msa0457520:intron | 50.0% | |
| !! | TTGGAGCGTTTTGAACCTGG+AGG | - | chr3_3:52479535-52479554 | Msa0457520:CDS | 50.0% |
| AAACGCTAAATCCAGCCTCC+AGG | + | chr3_3:52479553-52479572 | None:intergenic | 50.0% | |
| AGGATACAAAGGCAGACCAC+AGG | + | chr3_3:52479751-52479770 | None:intergenic | 50.0% | |
| GGTCTGCCTTTGTATCCTTG+AGG | - | chr3_3:52479753-52479772 | Msa0457520:intron | 50.0% | |
| CTGCCTTTGTATCCTTGAGG+TGG | - | chr3_3:52479756-52479775 | Msa0457520:intron | 50.0% | |
| ! | ATTGAGGTCCAGTCTTGTGG+TGG | - | chr3_3:52479892-52479911 | Msa0457520:intron | 50.0% |
| ! | TTGAGGTCCAGTCTTGTGGT+GGG | - | chr3_3:52479893-52479912 | Msa0457520:intron | 50.0% |
| AGCTCTGTTTGGCAGTTTGG+AGG | - | chr3_3:52480580-52480599 | Msa0457520:intron | 50.0% | |
| GCTCTGTTTGGCAGTTTGGA+GGG | - | chr3_3:52480581-52480600 | Msa0457520:intron | 50.0% | |
| CTCTGTTTGGCAGTTTGGAG+GGG | - | chr3_3:52480582-52480601 | Msa0457520:intron | 50.0% | |
| !! | GTTTTGAGCTCCCCCAGATT+AGG | - | chr3_3:52480809-52480828 | Msa0457520:intron | 50.0% |
| TTTGAGCTCCCCCAGATTAG+GGG | - | chr3_3:52480811-52480830 | Msa0457520:intron | 50.0% | |
| TATTTGCGAGTTTGGGGGGA+GGG | + | chr3_3:52480938-52480957 | None:intergenic | 50.0% | |
| TTATTTGCGAGTTTGGGGGG+AGG | + | chr3_3:52480939-52480958 | None:intergenic | 50.0% | |
| ATATGGTGAGGTGACAGGCA+AGG | - | chr3_3:52481810-52481829 | Msa0457520:intron | 50.0% | |
| ACTCAATTCGAATGGCCGCA+AGG | + | chr3_3:52482070-52482089 | None:intergenic | 50.0% | |
| GGTGAGGAATGCACACATCT+TGG | + | chr3_3:52482191-52482210 | None:intergenic | 50.0% | |
| TGCATATGGATCGAGTCCAG+GGG | + | chr3_3:52482212-52482231 | None:intergenic | 50.0% | |
| TCATCATCACCAGATCCAGC+TGG | + | chr3_3:52482270-52482289 | None:intergenic | 50.0% | |
| GATAGGTGTAGGGCTGAGAT+TGG | - | chr3_3:52482291-52482310 | Msa0457520:intron | 50.0% | |
| GCTGCTAACTATTGGGGTCA+AGG | - | chr3_3:52482324-52482343 | Msa0457520:intron | 50.0% | |
| ! | TCAAGCTTCTCTGAGGGTCT+TGG | - | chr3_3:52482440-52482459 | Msa0457520:intron | 50.0% |
| CTGAGGGTCTTGGAAAAGGT+TGG | - | chr3_3:52482450-52482469 | Msa0457520:intron | 50.0% | |
| AAAGGTTGGGTTCCTTAGGG+AGG | - | chr3_3:52482464-52482483 | Msa0457520:intron | 50.0% | |
| AAGGTTGGGTTCCTTAGGGA+GGG | - | chr3_3:52482465-52482484 | Msa0457520:intron | 50.0% | |
| !! | GGTGTGTTGGTGACTACTGT+GGG | - | chr3_3:52482633-52482652 | Msa0457520:intron | 50.0% |
| GTGACTACTGTGGGTAGAGA+CGG | - | chr3_3:52482642-52482661 | Msa0457520:intron | 50.0% | |
| ! | TGCCTACGTTTTGTGCAGTC+TGG | - | chr3_3:52482699-52482718 | Msa0457520:intron | 50.0% |
| TGCCAGACTGCACAAAACGT+AGG | + | chr3_3:52482704-52482723 | None:intergenic | 50.0% | |
| ATGGGAACAGCATGGCAAGT+TGG | + | chr3_3:52482814-52482833 | None:intergenic | 50.0% | |
| ! | GTTGTGCCTTTTGCAGAACC+CGG | - | chr3_3:52483224-52483243 | Msa0457520:CDS | 50.0% |
| ! | TTGTGCCTTTTGCAGAACCC+GGG | - | chr3_3:52483225-52483244 | Msa0457520:CDS | 50.0% |
| CAAAACCCGGGTTCTGCAAA+AGG | + | chr3_3:52483233-52483252 | None:intergenic | 50.0% | |
| ACCCATGAAGGTCCTTGGAT+CGG | + | chr3_3:52483289-52483308 | None:intergenic | 50.0% | |
| ATTCCACCCATGAAGGTCCT+TGG | + | chr3_3:52483294-52483313 | None:intergenic | 50.0% | |
| TGATCGGATTCCACCCATGA+AGG | + | chr3_3:52483301-52483320 | None:intergenic | 50.0% | |
| CCACGGAATATGCCCAAAGT+CGG | + | chr3_3:52483469-52483488 | None:intergenic | 50.0% | |
| TCCACTGAGTTGTTTGGGGG+TGG | - | chr3_3:52479025-52479044 | Msa0457520:intron | 55.0% | |
| ACCACCCCCAAACAACTCAG+TGG | + | chr3_3:52479029-52479048 | None:intergenic | 55.0% | |
| !! | AGCGTTTTGAACCTGGAGGC+TGG | - | chr3_3:52479539-52479558 | Msa0457520:CDS | 55.0% |
| GATTGCAAGCCTCGCTCCAT+TGG | + | chr3_3:52479821-52479840 | None:intergenic | 55.0% | |
| GCGAGGCTTGCAATCTTCTG+AGG | - | chr3_3:52479826-52479845 | Msa0457520:intron | 55.0% | |
| !! | GTCCAGTCTTGTGGTGGGTT+GGG | - | chr3_3:52479898-52479917 | Msa0457520:intron | 55.0% |
| GGGTTGGGAGTGATCTTGCT+TGG | - | chr3_3:52479913-52479932 | Msa0457520:intron | 55.0% | |
| TGTTTGGCAGTTTGGAGGGG+AGG | - | chr3_3:52480585-52480604 | Msa0457520:intron | 55.0% | |
| GTTTGGCAGTTTGGAGGGGA+GGG | - | chr3_3:52480586-52480605 | Msa0457520:intron | 55.0% | |
| ATTTGCGAGTTTGGGGGGAG+GGG | + | chr3_3:52480937-52480956 | None:intergenic | 55.0% | |
| AGGTGACAGGCAAGGCAACA+TGG | - | chr3_3:52481818-52481837 | Msa0457520:intron | 55.0% | |
| GGTGACAGGCAAGGCAACAT+GGG | - | chr3_3:52481819-52481838 | Msa0457520:intron | 55.0% | |
| ATGTGTGCATTCCTCACCCC+TGG | - | chr3_3:52482193-52482212 | Msa0457520:intron | 55.0% | |
| !! | GGGTGTGTTGGTGACTACTG+TGG | - | chr3_3:52482632-52482651 | Msa0457520:intron | 55.0% |
| GTGGAAACTGTCCCGATCCA+AGG | - | chr3_3:52483274-52483293 | Msa0457520:CDS | 55.0% | |
| TCCCGATCCAAGGACCTTCA+TGG | - | chr3_3:52483284-52483303 | Msa0457520:CDS | 55.0% | |
| CCCATGAAGGTCCTTGGATC+GGG | + | chr3_3:52483288-52483307 | None:intergenic | 55.0% | |
| CCCGATCCAAGGACCTTCAT+GGG | - | chr3_3:52483285-52483304 | Msa0457520:CDS | 55.0% | |
| GATCCAAGGACCTTCATGGG+TGG | - | chr3_3:52483288-52483307 | Msa0457520:CDS | 55.0% | |
| CCGACTTTGGGCATATTCCG+TGG | - | chr3_3:52483466-52483485 | Msa0457520:five_prime_UTR | 55.0% | |
| ! | TGGGGGAGGCGCATGATTAG+TGG | - | chr3_3:52479210-52479229 | Msa0457520:CDS | 60.0% |
| ! | GGGGGAGGCGCATGATTAGT+GGG | - | chr3_3:52479211-52479230 | Msa0457520:CDS | 60.0% |
| ! | GGGGAGGCGCATGATTAGTG+GGG | - | chr3_3:52479212-52479231 | Msa0457520:CDS | 60.0% |
| CACTGTGCACCAATGGAGCG+AGG | - | chr3_3:52479809-52479828 | Msa0457520:intron | 60.0% | |
| !! | GGTCCAGTCTTGTGGTGGGT+TGG | - | chr3_3:52479897-52479916 | Msa0457520:intron | 60.0% |
| CTCCCAACCCACCACAAGAC+TGG | + | chr3_3:52479903-52479922 | None:intergenic | 60.0% | |
| GCAGTTTGGAGGGGAGGGTA+GGG | - | chr3_3:52480591-52480610 | Msa0457520:intron | 60.0% | |
| GGGGAGGGTAGGGTTATGAG+TGG | - | chr3_3:52480601-52480620 | Msa0457520:intron | 60.0% | |
| ATGGATCGAGTCCAGGGGTG+AGG | + | chr3_3:52482207-52482226 | None:intergenic | 60.0% | |
| GGCAGTTTGGAGGGGAGGGT+AGG | - | chr3_3:52480590-52480609 | Msa0457520:intron | 65.0% | |
| TTTGGGGGGAGGGGAGGGGA+GGG | + | chr3_3:52480928-52480947 | None:intergenic | 70.0% | |
| CGAGTTTGGGGGGAGGGGAG+GGG | + | chr3_3:52480932-52480951 | None:intergenic | 70.0% | |
| GCGAGTTTGGGGGGAGGGGA+GGG | + | chr3_3:52480933-52480952 | None:intergenic | 70.0% | |
| TGCGAGTTTGGGGGGAGGGG+AGG | + | chr3_3:52480934-52480953 | None:intergenic | 70.0% | |
| GTTTGGGGGGAGGGGAGGGG+AGG | + | chr3_3:52480929-52480948 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 52478089 | 52483688 | 52478089 | ID=Msa0457520;Name=Msa0457520 |
| chr3_3 | mRNA | 52478089 | 52483688 | 52478089 | ID=Msa0457520-mRNA-1;Parent=Msa0457520;Name=Msa0457520-mRNA-1;_AED=0.15;_eAED=0.15;_QI=225|0.33|0.57|0.85|1|1|7|322|383 |
| chr3_3 | exon | 52478089 | 52478537 | 52478089 | ID=Msa0457520-mRNA-1:exon:10098;Parent=Msa0457520-mRNA-1 |
| chr3_3 | exon | 52479203 | 52479745 | 52479203 | ID=Msa0457520-mRNA-1:exon:10097;Parent=Msa0457520-mRNA-1 |
| chr3_3 | exon | 52481414 | 52481561 | 52481414 | ID=Msa0457520-mRNA-1:exon:10096;Parent=Msa0457520-mRNA-1 |
| chr3_3 | exon | 52481889 | 52481975 | 52481889 | ID=Msa0457520-mRNA-1:exon:10095;Parent=Msa0457520-mRNA-1 |
| chr3_3 | exon | 52483028 | 52483076 | 52483028 | ID=Msa0457520-mRNA-1:exon:10094;Parent=Msa0457520-mRNA-1 |
| chr3_3 | exon | 52483177 | 52483325 | 52483177 | ID=Msa0457520-mRNA-1:exon:10093;Parent=Msa0457520-mRNA-1 |
| chr3_3 | exon | 52483415 | 52483688 | 52483415 | ID=Msa0457520-mRNA-1:exon:10092;Parent=Msa0457520-mRNA-1 |
| chr3_3 | five_prime_UTR | 52483464 | 52483688 | 52483464 | ID=Msa0457520-mRNA-1:five_prime_utr;Parent=Msa0457520-mRNA-1 |
| chr3_3 | CDS | 52483415 | 52483463 | 52483415 | ID=Msa0457520-mRNA-1:cds;Parent=Msa0457520-mRNA-1 |
| chr3_3 | CDS | 52483177 | 52483325 | 52483177 | ID=Msa0457520-mRNA-1:cds;Parent=Msa0457520-mRNA-1 |
| chr3_3 | CDS | 52483028 | 52483076 | 52483028 | ID=Msa0457520-mRNA-1:cds;Parent=Msa0457520-mRNA-1 |
| chr3_3 | CDS | 52481889 | 52481975 | 52481889 | ID=Msa0457520-mRNA-1:cds;Parent=Msa0457520-mRNA-1 |
| chr3_3 | CDS | 52481414 | 52481561 | 52481414 | ID=Msa0457520-mRNA-1:cds;Parent=Msa0457520-mRNA-1 |
| chr3_3 | CDS | 52479203 | 52479745 | 52479203 | ID=Msa0457520-mRNA-1:cds;Parent=Msa0457520-mRNA-1 |
| chr3_3 | CDS | 52478411 | 52478537 | 52478411 | ID=Msa0457520-mRNA-1:cds;Parent=Msa0457520-mRNA-1 |
| chr3_3 | three_prime_UTR | 52478089 | 52478410 | 52478089 | ID=Msa0457520-mRNA-1:three_prime_utr;Parent=Msa0457520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
