Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458840 | AES69527.1 | 93.089 | 246 | 15 | 1 | 1 | 246 | 1 | 244 | 1.99e-155 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458840 | sp|Q9FJK3|AGL80_ARATH | 44.516 | 155 | 85 | 1 | 1 | 155 | 1 | 154 | 1.30e-28 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458840 | G7IWW4 | 93.089 | 246 | 15 | 1 | 1 | 246 | 1 | 244 | 9.53e-156 | 441 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0458840 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458840 | MtrunA17_Chr3g0106421 | 93.119 | 218 | 13 | 1 | 29 | 246 | 1 | 216 | 1.04e-138 | 388 |
| Msa0458840 | MtrunA17_Chr2g0283941 | 42.437 | 238 | 136 | 1 | 1 | 237 | 1 | 238 | 4.36e-60 | 189 |
| Msa0458840 | MtrunA17_Chr3g0107461 | 48.408 | 157 | 81 | 0 | 1 | 157 | 1 | 157 | 5.53e-44 | 145 |
| Msa0458840 | MtrunA17_Chr3g0107381 | 43.333 | 180 | 91 | 3 | 1 | 176 | 1 | 173 | 9.07e-44 | 147 |
| Msa0458840 | MtrunA17_Chr3g0106501 | 48.889 | 135 | 69 | 0 | 29 | 163 | 1 | 135 | 7.05e-40 | 135 |
| Msa0458840 | MtrunA17_Chr4g0014321 | 42.857 | 154 | 88 | 0 | 1 | 154 | 1 | 154 | 1.77e-39 | 136 |
| Msa0458840 | MtrunA17_Chr3g0110131 | 36.752 | 234 | 140 | 3 | 1 | 228 | 1 | 232 | 5.57e-39 | 135 |
| Msa0458840 | MtrunA17_Chr8g0351751 | 38.095 | 168 | 102 | 1 | 1 | 166 | 1 | 168 | 1.46e-34 | 124 |
| Msa0458840 | MtrunA17_Chr3g0105791 | 43.262 | 141 | 80 | 0 | 29 | 169 | 1 | 141 | 4.65e-33 | 117 |
| Msa0458840 | MtrunA17_Chr4g0013041 | 35.714 | 196 | 117 | 3 | 1 | 189 | 1 | 194 | 4.99e-33 | 119 |
| Msa0458840 | MtrunA17_Chr4g0031421 | 42.446 | 139 | 80 | 0 | 29 | 167 | 1 | 139 | 5.70e-33 | 117 |
| Msa0458840 | MtrunA17_Chr5g0432691 | 38.961 | 154 | 93 | 1 | 1 | 154 | 1 | 153 | 1.57e-32 | 116 |
| Msa0458840 | MtrunA17_Chr4g0014031 | 41.667 | 156 | 91 | 0 | 1 | 156 | 1 | 156 | 5.45e-32 | 117 |
| Msa0458840 | MtrunA17_Chr3g0107351 | 36.306 | 157 | 99 | 1 | 3 | 159 | 2 | 157 | 1.33e-30 | 111 |
| Msa0458840 | MtrunA17_Chr2g0296861 | 41.509 | 159 | 92 | 1 | 1 | 159 | 1 | 158 | 8.84e-30 | 109 |
| Msa0458840 | MtrunA17_Chr4g0014131 | 41.667 | 156 | 91 | 0 | 1 | 156 | 1 | 156 | 2.20e-29 | 110 |
| Msa0458840 | MtrunA17_Chr2g0296831 | 46.281 | 121 | 65 | 0 | 1 | 121 | 1 | 121 | 4.81e-29 | 106 |
| Msa0458840 | MtrunA17_Chr3g0107361 | 34.395 | 157 | 102 | 1 | 3 | 159 | 2 | 157 | 3.32e-28 | 105 |
| Msa0458840 | MtrunA17_Chr3g0107331 | 35.849 | 159 | 101 | 1 | 3 | 161 | 2 | 159 | 4.67e-28 | 104 |
| Msa0458840 | MtrunA17_Chr3g0107341 | 33.758 | 157 | 103 | 1 | 3 | 159 | 2 | 157 | 7.93e-27 | 101 |
| Msa0458840 | MtrunA17_Chr4g0014121 | 39.103 | 156 | 95 | 0 | 1 | 156 | 29 | 184 | 1.46e-26 | 101 |
| Msa0458840 | MtrunA17_Chr5g0420351 | 34.395 | 157 | 101 | 2 | 1 | 157 | 1 | 155 | 7.28e-26 | 99.0 |
| Msa0458840 | MtrunA17_Chr1g0188681 | 35.802 | 162 | 92 | 4 | 1 | 157 | 1 | 155 | 6.12e-25 | 96.7 |
| Msa0458840 | MtrunA17_Chr1g0197321 | 33.121 | 157 | 104 | 1 | 1 | 157 | 1 | 156 | 3.88e-23 | 92.0 |
| Msa0458840 | MtrunA17_Chr1g0188651 | 38.854 | 157 | 86 | 3 | 1 | 154 | 1 | 150 | 6.86e-23 | 91.3 |
| Msa0458840 | MtrunA17_Chr1g0197261 | 33.333 | 159 | 100 | 4 | 1 | 157 | 1 | 155 | 2.40e-22 | 89.7 |
| Msa0458840 | MtrunA17_Chr1g0197461 | 36.076 | 158 | 97 | 3 | 3 | 159 | 2 | 156 | 5.69e-22 | 89.0 |
| Msa0458840 | MtrunA17_Chr1g0193311 | 36.306 | 157 | 98 | 2 | 1 | 157 | 1 | 155 | 7.48e-22 | 88.6 |
| Msa0458840 | MtrunA17_Chr7g0218151 | 36.943 | 157 | 97 | 2 | 1 | 157 | 1 | 155 | 1.14e-21 | 88.2 |
| Msa0458840 | MtrunA17_Chr1g0188661 | 36.709 | 158 | 96 | 3 | 1 | 157 | 1 | 155 | 2.33e-21 | 87.4 |
| Msa0458840 | MtrunA17_Chr4g0012761 | 36.306 | 157 | 98 | 2 | 1 | 157 | 1 | 155 | 3.34e-21 | 87.0 |
| Msa0458840 | MtrunA17_Chr6g0457851 | 26.728 | 217 | 143 | 5 | 1 | 211 | 11 | 217 | 2.22e-18 | 83.2 |
| Msa0458840 | MtrunA17_Chr4g0008701 | 32.479 | 117 | 79 | 0 | 3 | 119 | 6 | 122 | 2.82e-17 | 80.5 |
| Msa0458840 | MtrunA17_Chr1g0212151 | 28.931 | 159 | 98 | 4 | 1 | 153 | 1 | 150 | 3.05e-16 | 77.0 |
| Msa0458840 | MtrunA17_Chr7g0267601 | 29.915 | 117 | 82 | 0 | 3 | 119 | 6 | 122 | 4.82e-16 | 77.0 |
| Msa0458840 | MtrunA17_Chr3g0128721 | 30.357 | 112 | 75 | 1 | 3 | 114 | 6 | 114 | 1.44e-14 | 72.8 |
| Msa0458840 | MtrunA17_Chr6g0449851 | 33.981 | 103 | 61 | 3 | 1 | 97 | 1 | 102 | 7.67e-13 | 67.0 |
| Msa0458840 | MtrunA17_Chr8g0351051 | 24.454 | 229 | 151 | 8 | 1 | 226 | 1 | 210 | 3.51e-12 | 64.3 |
| Msa0458840 | MtrunA17_Chr1g0175611 | 52.083 | 48 | 23 | 0 | 1 | 48 | 1 | 48 | 2.75e-11 | 60.5 |
| Msa0458840 | MtrunA17_Chr4g0059631 | 23.626 | 182 | 125 | 5 | 1 | 177 | 1 | 173 | 3.03e-11 | 61.6 |
| Msa0458840 | MtrunA17_Chr5g0404951 | 28.302 | 159 | 91 | 3 | 1 | 153 | 1 | 142 | 4.78e-11 | 60.8 |
| Msa0458840 | MtrunA17_Chr6g0455511 | 29.605 | 152 | 91 | 4 | 1 | 150 | 1 | 138 | 6.59e-11 | 60.8 |
| Msa0458840 | MtrunA17_Chr4g0061691 | 26.437 | 174 | 117 | 3 | 1 | 174 | 1 | 163 | 8.26e-11 | 60.1 |
| Msa0458840 | MtrunA17_Chr6g0449861 | 29.204 | 113 | 73 | 3 | 1 | 107 | 9 | 120 | 9.20e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0458840 | AT3G05860.2 | 37.173 | 191 | 105 | 4 | 1 | 189 | 1 | 178 | 9.98e-30 | 110 |
| Msa0458840 | AT3G05860.3 | 35.450 | 189 | 114 | 3 | 1 | 187 | 1 | 183 | 1.08e-29 | 112 |
| Msa0458840 | AT5G48670.1 | 44.516 | 155 | 85 | 1 | 1 | 155 | 1 | 154 | 1.32e-29 | 113 |
| Msa0458840 | AT3G05860.1 | 37.173 | 191 | 105 | 4 | 1 | 189 | 1 | 178 | 1.68e-29 | 111 |
| Msa0458840 | AT1G65300.1 | 33.032 | 221 | 135 | 5 | 3 | 211 | 2 | 221 | 8.75e-27 | 105 |
| Msa0458840 | AT1G65330.1 | 44.348 | 115 | 64 | 0 | 3 | 117 | 2 | 116 | 3.82e-25 | 100 |
| Msa0458840 | AT5G26650.1 | 32.836 | 201 | 110 | 6 | 4 | 202 | 2 | 179 | 4.79e-23 | 96.7 |
| Msa0458840 | AT5G27960.1 | 29.082 | 196 | 127 | 3 | 4 | 187 | 2 | 197 | 3.92e-22 | 93.2 |
| Msa0458840 | AT2G28700.1 | 34.815 | 135 | 85 | 1 | 1 | 135 | 1 | 132 | 3.73e-20 | 88.2 |
| Msa0458840 | AT5G27810.1 | 46.067 | 89 | 48 | 0 | 29 | 117 | 1 | 89 | 6.12e-20 | 82.8 |
| Msa0458840 | AT5G26630.1 | 35.032 | 157 | 97 | 2 | 1 | 155 | 1 | 154 | 8.68e-20 | 85.1 |
| Msa0458840 | AT1G31640.1 | 36.752 | 117 | 69 | 2 | 3 | 117 | 2 | 115 | 1.52e-17 | 81.6 |
| Msa0458840 | AT5G26580.1 | 27.237 | 257 | 148 | 9 | 1 | 232 | 1 | 243 | 4.59e-17 | 79.7 |
| Msa0458840 | AT1G31630.1 | 33.913 | 115 | 75 | 1 | 3 | 117 | 2 | 115 | 1.02e-16 | 78.6 |
| Msa0458840 | AT1G22590.2 | 34.862 | 109 | 71 | 0 | 1 | 109 | 1 | 109 | 3.49e-16 | 73.9 |
| Msa0458840 | AT5G06500.1 | 28.931 | 159 | 105 | 2 | 1 | 156 | 1 | 154 | 1.05e-15 | 74.3 |
| Msa0458840 | AT5G55690.1 | 29.375 | 160 | 90 | 4 | 1 | 153 | 1 | 144 | 3.11e-15 | 73.6 |
| Msa0458840 | AT5G55690.2 | 29.375 | 160 | 90 | 4 | 1 | 153 | 1 | 144 | 3.11e-15 | 73.6 |
| Msa0458840 | AT2G03060.3 | 31.818 | 132 | 76 | 3 | 1 | 132 | 1 | 118 | 3.29e-13 | 68.9 |
| Msa0458840 | AT2G03060.7 | 31.818 | 132 | 76 | 3 | 1 | 132 | 1 | 118 | 3.29e-13 | 68.9 |
| Msa0458840 | AT2G03060.1 | 31.818 | 132 | 76 | 3 | 1 | 132 | 1 | 118 | 3.29e-13 | 68.9 |
| Msa0458840 | AT2G03060.2 | 31.818 | 132 | 76 | 3 | 1 | 132 | 1 | 118 | 3.53e-13 | 68.6 |
| Msa0458840 | AT3G18650.1 | 42.105 | 76 | 42 | 2 | 15 | 89 | 30 | 104 | 1.24e-11 | 64.3 |
| Msa0458840 | AT5G39750.1 | 23.830 | 235 | 139 | 9 | 24 | 222 | 31 | 261 | 2.82e-11 | 63.2 |
| Msa0458840 | AT2G40210.1 | 33.000 | 100 | 67 | 0 | 1 | 100 | 1 | 100 | 3.57e-11 | 62.8 |
| Msa0458840 | AT2G45650.1 | 32.727 | 110 | 71 | 2 | 1 | 109 | 1 | 108 | 3.72e-11 | 62.0 |
| Msa0458840 | AT1G24260.3 | 29.299 | 157 | 89 | 5 | 1 | 150 | 1 | 142 | 9.34e-11 | 60.5 |
Find 53 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAGACTAACATGAATTA+TGG | 0.238809 | 3_3:+55022966 | Msa0458840:CDS |
| GATTTCGACCCAAATGGATT+TGG | 0.290310 | 3_3:+55023059 | Msa0458840:CDS |
| GCCCATGAGCAGGTTGTAAA+TGG | 0.293188 | 3_3:+55022831 | Msa0458840:CDS |
| TGGTGGATCTATATAGCTTT+TGG | 0.314881 | 3_3:+55022598 | Msa0458840:CDS |
| TTACAACCTGCTCATGGGCT+TGG | 0.336276 | 3_3:-55022827 | None:intergenic |
| ACCATGGTCAAGCAGAAGTT+TGG | 0.357178 | 3_3:+55022502 | Msa0458840:CDS |
| TAGATTGATCCAAATCCATT+TGG | 0.359545 | 3_3:-55023068 | None:intergenic |
| TGCTTTCTCATACTTCTCTC+TGG | 0.372187 | 3_3:-55022640 | None:intergenic |
| TACAACCTGCTCATGGGCTT+GGG | 0.383623 | 3_3:-55022826 | None:intergenic |
| TATAAAGGATGGAGATTTGT+TGG | 0.386723 | 3_3:+55022863 | Msa0458840:CDS |
| AAATGGAGCTGAAGCTATAA+AGG | 0.393018 | 3_3:+55022848 | Msa0458840:CDS |
| TAATCAGAGGTTGGATTCAA+TGG | 0.415635 | 3_3:+55022800 | Msa0458840:CDS |
| GAAGTATGAGAAAGCAATGA+TGG | 0.430824 | 3_3:+55022647 | Msa0458840:CDS |
| AGATTGATCCAAATCCATTT+GGG | 0.442780 | 3_3:-55023067 | None:intergenic |
| CTCCATTTACAACCTGCTCA+TGG | 0.464952 | 3_3:-55022833 | None:intergenic |
| GAGGTATGTGTAATAATCTA+TGG | 0.465342 | 3_3:+55022474 | Msa0458840:CDS |
| ATGAATTGAGCACCCTTTGT+GGG | 0.482929 | 3_3:+55022448 | Msa0458840:CDS |
| GAGTGATGAGCAACTACCTA+TGG | 0.484384 | 3_3:+55022995 | Msa0458840:CDS |
| GAAGGAAGTTAATCAGAGGT+TGG | 0.490639 | 3_3:+55022791 | Msa0458840:CDS |
| TCAAAATCAAAATCATCAAA+TGG | 0.490798 | 3_3:-55023032 | None:intergenic |
| AATGAATTGAGCACCCTTTG+TGG | 0.491238 | 3_3:+55022447 | Msa0458840:CDS |
| TTTAATTGATGACAATATGA+AGG | 0.493575 | 3_3:+55022773 | Msa0458840:CDS |
| GAGCACCCTTTGTGGGGTAG+AGG | 0.494310 | 3_3:+55022455 | Msa0458840:CDS |
| TTTGAGCTTCTTTCTGCCCA+TGG | 0.497356 | 3_3:-55021021 | None:intergenic |
| ACATAATCAATAAGTCGAAA+CGG | 0.519099 | 3_3:+55021051 | Msa0458840:CDS |
| TCCATTTACAACCTGCTCAT+GGG | 0.519104 | 3_3:-55022832 | None:intergenic |
| CCTACTCGTAACTATAATGT+TGG | 0.540983 | 3_3:+55022714 | Msa0458840:CDS |
| AGGAGATACACGGGATAACA+TGG | 0.551769 | 3_3:+55022920 | Msa0458840:CDS |
| ACATACCTCTACCCCACAAA+GGG | 0.555523 | 3_3:-55022460 | None:intergenic |
| GGTAACCCAAGCCCATGAGC+AGG | 0.557566 | 3_3:+55022821 | Msa0458840:CDS |
| GAAGTTTGGCCATCCGCGAT+AGG | 0.559712 | 3_3:+55022516 | Msa0458840:CDS |
| GGAGCTGAAGCTATAAAGGA+TGG | 0.563914 | 3_3:+55022852 | Msa0458840:CDS |
| CGCTGAGTGGAGGAGATACA+CGG | 0.569700 | 3_3:+55022910 | Msa0458840:CDS |
| GCCAAACTTCTGCTTGACCA+TGG | 0.570779 | 3_3:-55022503 | None:intergenic |
| TCATGTTAGTCTCATAACCA+TGG | 0.584822 | 3_3:-55022959 | None:intergenic |
| CATGTTAGTCTCATAACCAT+GGG | 0.600840 | 3_3:-55022958 | None:intergenic |
| GCTCAAGTGCCGCTGAGTGG+AGG | 0.602451 | 3_3:+55022900 | Msa0458840:CDS |
| AATCATCAAATGGTGGCATG+AGG | 0.619303 | 3_3:-55023022 | None:intergenic |
| ATTGCTCAAGTGCCGCTGAG+TGG | 0.623375 | 3_3:+55022897 | Msa0458840:CDS |
| AAATCAAAATCATCAAATGG+TGG | 0.629108 | 3_3:-55023029 | None:intergenic |
| CACATACCTCTACCCCACAA+AGG | 0.629470 | 3_3:-55022461 | None:intergenic |
| TACACGGGATAACATGGATG+AGG | 0.629602 | 3_3:+55022926 | Msa0458840:CDS |
| TGAATTGAGCACCCTTTGTG+GGG | 0.632793 | 3_3:+55022449 | Msa0458840:CDS |
| CCAACATTATAGTTACGAGT+AGG | 0.633928 | 3_3:-55022714 | None:intergenic |
| ATAATCTATGGTGAAAACCA+TGG | 0.637538 | 3_3:+55022486 | Msa0458840:CDS |
| CGTTCTAGTCCTATCGCGGA+TGG | 0.640692 | 3_3:-55022525 | None:intergenic |
| AATCAATAAGTCGAAACGGA+TGG | 0.645843 | 3_3:+55021055 | Msa0458840:CDS |
| GGTGGCATGAGGAAGTCCAT+AGG | 0.659527 | 3_3:-55023011 | None:intergenic |
| ATATGAAGGAAGTTAATCAG+AGG | 0.681452 | 3_3:+55022787 | Msa0458840:CDS |
| GATGAGGTTGCTGATACCCA+TGG | 0.682185 | 3_3:+55022942 | Msa0458840:CDS |
| CACACGTTCTAGTCCTATCG+CGG | 0.694193 | 3_3:-55022529 | None:intergenic |
| GCTGAGTGGAGGAGATACAC+GGG | 0.698908 | 3_3:+55022911 | Msa0458840:CDS |
| CGTGTATCTCCTCCACTCAG+CGG | 0.724307 | 3_3:-55022909 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTATTTATTTATAA+TGG | - | chr3_3:55021339-55021358 | None:intergenic | 0.0% |
| !!! | AATTTTTTATTTATTTATAA+TGG | - | chr3_3:55021339-55021358 | None:intergenic | 0.0% |
| !!! | ATTGTTTTTATTATACAATT+AGG | + | chr3_3:55021430-55021449 | Msa0458840:intron | 10.0% |
| !!! | TTGTTTTTATTATACAATTA+GGG | + | chr3_3:55021431-55021450 | Msa0458840:intron | 10.0% |
| !!! | TTTTTATCTTCAAAATAATA+GGG | - | chr3_3:55021484-55021503 | None:intergenic | 10.0% |
| !!! | TTTTTTATCTTCAAAATAAT+AGG | - | chr3_3:55021485-55021504 | None:intergenic | 10.0% |
| !!! | TAAAATTTTTTATTTGATTC+GGG | - | chr3_3:55021649-55021668 | None:intergenic | 10.0% |
| !!! | TTATATATTTATTTTGAAAG+AGG | - | chr3_3:55021777-55021796 | None:intergenic | 10.0% |
| !! | CATACAAAATATAATATTAT+TGG | - | chr3_3:55021983-55022002 | None:intergenic | 10.0% |
| !! | AAATTATATATAACTGAATA+GGG | - | chr3_3:55022390-55022409 | None:intergenic | 10.0% |
| !! | TAAATTATATATAACTGAAT+AGG | - | chr3_3:55022391-55022410 | None:intergenic | 10.0% |
| !!! | TTATATATATGTTTTTCAAT+AGG | + | chr3_3:55022408-55022427 | Msa0458840:intron | 10.0% |
| !!! | ATTGTTTTTATTATACAATT+AGG | + | chr3_3:55021430-55021449 | Msa0458840:intron | 10.0% |
| !!! | TTGTTTTTATTATACAATTA+GGG | + | chr3_3:55021431-55021450 | Msa0458840:intron | 10.0% |
| !!! | TTTTTATCTTCAAAATAATA+GGG | - | chr3_3:55021484-55021503 | None:intergenic | 10.0% |
| !!! | TTTTTTATCTTCAAAATAAT+AGG | - | chr3_3:55021485-55021504 | None:intergenic | 10.0% |
| !!! | TAAAATTTTTTATTTGATTC+GGG | - | chr3_3:55021649-55021668 | None:intergenic | 10.0% |
| !!! | TTATATATTTATTTTGAAAG+AGG | - | chr3_3:55021777-55021796 | None:intergenic | 10.0% |
| !! | CATACAAAATATAATATTAT+TGG | - | chr3_3:55021983-55022002 | None:intergenic | 10.0% |
| !! | AAATTATATATAACTGAATA+GGG | - | chr3_3:55022390-55022409 | None:intergenic | 10.0% |
| !! | TAAATTATATATAACTGAAT+AGG | - | chr3_3:55022391-55022410 | None:intergenic | 10.0% |
| !!! | TTATATATATGTTTTTCAAT+AGG | + | chr3_3:55022408-55022427 | Msa0458840:intron | 10.0% |
| !!! | TCAAAGATTTTAATTACAAT+GGG | - | chr3_3:55021190-55021209 | None:intergenic | 15.0% |
| !!! | ATCAAAGATTTTAATTACAA+TGG | - | chr3_3:55021191-55021210 | None:intergenic | 15.0% |
| !! | TAATTAAAATCTTTGATCTT+CGG | + | chr3_3:55021194-55021213 | Msa0458840:intron | 15.0% |
| !! | AAAAATATTACTACCATTAA+TGG | + | chr3_3:55021565-55021584 | Msa0458840:intron | 15.0% |
| !!! | ATCTTTCATTTTTTCAAAAA+CGG | + | chr3_3:55021594-55021613 | Msa0458840:intron | 15.0% |
| !! | CATATAAAATCAATTATTGT+TGG | + | chr3_3:55021692-55021711 | Msa0458840:intron | 15.0% |
| !! | AAATGGAAAAAATAAAATGT+TGG | + | chr3_3:55022090-55022109 | Msa0458840:intron | 15.0% |
| !! | AATAAAAAACATCAAAATCA+TGG | - | chr3_3:55022123-55022142 | None:intergenic | 15.0% |
| !!! | TCAAAGATTTTAATTACAAT+GGG | - | chr3_3:55021190-55021209 | None:intergenic | 15.0% |
| !!! | ATCAAAGATTTTAATTACAA+TGG | - | chr3_3:55021191-55021210 | None:intergenic | 15.0% |
| !! | TAATTAAAATCTTTGATCTT+CGG | + | chr3_3:55021194-55021213 | Msa0458840:intron | 15.0% |
| !! | AAAAATATTACTACCATTAA+TGG | + | chr3_3:55021565-55021584 | Msa0458840:intron | 15.0% |
| !!! | ATCTTTCATTTTTTCAAAAA+CGG | + | chr3_3:55021594-55021613 | Msa0458840:intron | 15.0% |
| !! | CATATAAAATCAATTATTGT+TGG | + | chr3_3:55021692-55021711 | Msa0458840:intron | 15.0% |
| !! | AAATGGAAAAAATAAAATGT+TGG | + | chr3_3:55022090-55022109 | Msa0458840:intron | 15.0% |
| !! | AATAAAAAACATCAAAATCA+TGG | - | chr3_3:55022123-55022142 | None:intergenic | 15.0% |
| !!! | GATGAATATTTTTTCTACTT+TGG | - | chr3_3:55021390-55021409 | None:intergenic | 20.0% |
| !! | AAAATAATAGGGTAAATCAT+TGG | - | chr3_3:55021473-55021492 | None:intergenic | 20.0% |
| !! | AGATAAAAAAAGTAAAATCG+TGG | + | chr3_3:55021495-55021514 | Msa0458840:intron | 20.0% |
| !! | GAAAGATAAAAAACCATTAA+TGG | - | chr3_3:55021581-55021600 | None:intergenic | 20.0% |
| !!! | TCTTTCATTTTTTCAAAAAC+GGG | + | chr3_3:55021595-55021614 | Msa0458840:intron | 20.0% |
| !!! | ATCATTTTATGAAAACTTCT+AGG | - | chr3_3:55021958-55021977 | None:intergenic | 20.0% |
| !!! | TTGATAAAATGTTAAGTTGT+TGG | + | chr3_3:55022151-55022170 | Msa0458840:intron | 20.0% |
| !! | ATAAAAAAATTGCACTTGTT+TGG | + | chr3_3:55022203-55022222 | Msa0458840:intron | 20.0% |
| !! | TACTTCATAAAAAATGTTTG+AGG | + | chr3_3:55022248-55022267 | Msa0458840:intron | 20.0% |
| !!! | TTTAATTGATGACAATATGA+AGG | + | chr3_3:55022773-55022792 | Msa0458840:CDS | 20.0% |
| !! | TCAAAATCAAAATCATCAAA+TGG | - | chr3_3:55023035-55023054 | None:intergenic | 20.0% |
| !!! | GATGAATATTTTTTCTACTT+TGG | - | chr3_3:55021390-55021409 | None:intergenic | 20.0% |
| !! | AAAATAATAGGGTAAATCAT+TGG | - | chr3_3:55021473-55021492 | None:intergenic | 20.0% |
| !! | AGATAAAAAAAGTAAAATCG+TGG | + | chr3_3:55021495-55021514 | Msa0458840:intron | 20.0% |
| !! | GAAAGATAAAAAACCATTAA+TGG | - | chr3_3:55021581-55021600 | None:intergenic | 20.0% |
| !!! | TCTTTCATTTTTTCAAAAAC+GGG | + | chr3_3:55021595-55021614 | Msa0458840:intron | 20.0% |
| !!! | ATCATTTTATGAAAACTTCT+AGG | - | chr3_3:55021958-55021977 | None:intergenic | 20.0% |
| !!! | TTGATAAAATGTTAAGTTGT+TGG | + | chr3_3:55022151-55022170 | Msa0458840:intron | 20.0% |
| !! | ATAAAAAAATTGCACTTGTT+TGG | + | chr3_3:55022203-55022222 | Msa0458840:intron | 20.0% |
| !! | TACTTCATAAAAAATGTTTG+AGG | + | chr3_3:55022248-55022267 | Msa0458840:intron | 20.0% |
| !!! | TTTAATTGATGACAATATGA+AGG | + | chr3_3:55022773-55022792 | Msa0458840:CDS | 20.0% |
| !! | TCAAAATCAAAATCATCAAA+TGG | - | chr3_3:55023035-55023054 | None:intergenic | 20.0% |
| ! | ACATAATCAATAAGTCGAAA+CGG | + | chr3_3:55021051-55021070 | Msa0458840:CDS | 25.0% |
| ! | ACATTCAAAAAAAGAACAGA+AGG | + | chr3_3:55021080-55021099 | Msa0458840:CDS | 25.0% |
| ! | GCATGATTTAATTGAAACTA+AGG | - | chr3_3:55021122-55021141 | None:intergenic | 25.0% |
| ! | ATAAGTTCTATAGTTACCTT+GGG | - | chr3_3:55021227-55021246 | None:intergenic | 25.0% |
| ! | TATAAGTTCTATAGTTACCT+TGG | - | chr3_3:55021228-55021247 | None:intergenic | 25.0% |
| !!! | GAAAAATTAGTTTTACAGTG+GGG | - | chr3_3:55021260-55021279 | None:intergenic | 25.0% |
| !!! | CGAAAAATTAGTTTTACAGT+GGG | - | chr3_3:55021261-55021280 | None:intergenic | 25.0% |
| !!! | ACGAAAAATTAGTTTTACAG+TGG | - | chr3_3:55021262-55021281 | None:intergenic | 25.0% |
| ! | ATGTAACTATTTCATCAACA+TGG | - | chr3_3:55021308-55021327 | None:intergenic | 25.0% |
| ! | AAAAAAGAATGAAAGTCTTG+TGG | - | chr3_3:55021528-55021547 | None:intergenic | 25.0% |
| ! | TTAGATATGAATACCTATAG+CGG | + | chr3_3:55022054-55022073 | Msa0458840:intron | 25.0% |
| !! | ATAAAATGTTAAGTTGTTGG+TGG | + | chr3_3:55022154-55022173 | Msa0458840:intron | 25.0% |
| !! | TCATAAAAAATGTTTGAGGT+TGG | + | chr3_3:55022252-55022271 | Msa0458840:intron | 25.0% |
| ! | AATAGAAAACCTCTTATGTT+TGG | + | chr3_3:55022350-55022369 | Msa0458840:intron | 25.0% |
| ! | ATAGAAAACCTCTTATGTTT+GGG | + | chr3_3:55022351-55022370 | Msa0458840:intron | 25.0% |
| ! | AAAATTTACCCAAACATAAG+AGG | - | chr3_3:55022362-55022381 | None:intergenic | 25.0% |
| ! | ACTCAAAAGAAACAAAAAGA+TGG | + | chr3_3:55022578-55022597 | Msa0458840:CDS | 25.0% |
| ! | TATGAGACTAACATGAATTA+TGG | + | chr3_3:55022966-55022985 | Msa0458840:CDS | 25.0% |
| ! | AAATCAAAATCATCAAATGG+TGG | - | chr3_3:55023032-55023051 | None:intergenic | 25.0% |
| ! | ACATAATCAATAAGTCGAAA+CGG | + | chr3_3:55021051-55021070 | Msa0458840:CDS | 25.0% |
| ! | ACATTCAAAAAAAGAACAGA+AGG | + | chr3_3:55021080-55021099 | Msa0458840:CDS | 25.0% |
| ! | GCATGATTTAATTGAAACTA+AGG | - | chr3_3:55021122-55021141 | None:intergenic | 25.0% |
| ! | ATAAGTTCTATAGTTACCTT+GGG | - | chr3_3:55021227-55021246 | None:intergenic | 25.0% |
| ! | TATAAGTTCTATAGTTACCT+TGG | - | chr3_3:55021228-55021247 | None:intergenic | 25.0% |
| !!! | GAAAAATTAGTTTTACAGTG+GGG | - | chr3_3:55021260-55021279 | None:intergenic | 25.0% |
| !!! | CGAAAAATTAGTTTTACAGT+GGG | - | chr3_3:55021261-55021280 | None:intergenic | 25.0% |
| !!! | ACGAAAAATTAGTTTTACAG+TGG | - | chr3_3:55021262-55021281 | None:intergenic | 25.0% |
| ! | ATGTAACTATTTCATCAACA+TGG | - | chr3_3:55021308-55021327 | None:intergenic | 25.0% |
| ! | AAAAAAGAATGAAAGTCTTG+TGG | - | chr3_3:55021528-55021547 | None:intergenic | 25.0% |
| ! | TTAGATATGAATACCTATAG+CGG | + | chr3_3:55022054-55022073 | Msa0458840:intron | 25.0% |
| !! | ATAAAATGTTAAGTTGTTGG+TGG | + | chr3_3:55022154-55022173 | Msa0458840:intron | 25.0% |
| !! | TCATAAAAAATGTTTGAGGT+TGG | + | chr3_3:55022252-55022271 | Msa0458840:intron | 25.0% |
| ! | AATAGAAAACCTCTTATGTT+TGG | + | chr3_3:55022350-55022369 | Msa0458840:intron | 25.0% |
| ! | ATAGAAAACCTCTTATGTTT+GGG | + | chr3_3:55022351-55022370 | Msa0458840:intron | 25.0% |
| ! | AAAATTTACCCAAACATAAG+AGG | - | chr3_3:55022362-55022381 | None:intergenic | 25.0% |
| ! | ACTCAAAAGAAACAAAAAGA+TGG | + | chr3_3:55022578-55022597 | Msa0458840:CDS | 25.0% |
| ! | TATGAGACTAACATGAATTA+TGG | + | chr3_3:55022966-55022985 | Msa0458840:CDS | 25.0% |
| ! | AAATCAAAATCATCAAATGG+TGG | - | chr3_3:55023032-55023051 | None:intergenic | 25.0% |
| ATAATAGGGTAAATCATTGG+TGG | - | chr3_3:55021470-55021489 | None:intergenic | 30.0% | |
| GAGGTATGTGTAATAATCTA+TGG | + | chr3_3:55022474-55022493 | Msa0458840:CDS | 30.0% | |
| ATAATCTATGGTGAAAACCA+TGG | + | chr3_3:55022486-55022505 | Msa0458840:CDS | 30.0% | |
| CAAAAGAAACAAAAAGATGG+TGG | + | chr3_3:55022581-55022600 | Msa0458840:CDS | 30.0% | |
| ! | TATATAGCTTTTGGATGCAA+AGG | + | chr3_3:55022607-55022626 | Msa0458840:CDS | 30.0% |
| ATATGAAGGAAGTTAATCAG+AGG | + | chr3_3:55022787-55022806 | Msa0458840:CDS | 30.0% | |
| TATAAAGGATGGAGATTTGT+TGG | + | chr3_3:55022863-55022882 | Msa0458840:CDS | 30.0% | |
| AGATTGATCCAAATCCATTT+GGG | - | chr3_3:55023070-55023089 | None:intergenic | 30.0% | |
| TAGATTGATCCAAATCCATT+TGG | - | chr3_3:55023071-55023090 | None:intergenic | 30.0% | |
| ATAATAGGGTAAATCATTGG+TGG | - | chr3_3:55021470-55021489 | None:intergenic | 30.0% | |
| GAGGTATGTGTAATAATCTA+TGG | + | chr3_3:55022474-55022493 | Msa0458840:CDS | 30.0% | |
| ATAATCTATGGTGAAAACCA+TGG | + | chr3_3:55022486-55022505 | Msa0458840:CDS | 30.0% | |
| CAAAAGAAACAAAAAGATGG+TGG | + | chr3_3:55022581-55022600 | Msa0458840:CDS | 30.0% | |
| ! | TATATAGCTTTTGGATGCAA+AGG | + | chr3_3:55022607-55022626 | Msa0458840:CDS | 30.0% |
| ATATGAAGGAAGTTAATCAG+AGG | + | chr3_3:55022787-55022806 | Msa0458840:CDS | 30.0% | |
| TATAAAGGATGGAGATTTGT+TGG | + | chr3_3:55022863-55022882 | Msa0458840:CDS | 30.0% | |
| AGATTGATCCAAATCCATTT+GGG | - | chr3_3:55023070-55023089 | None:intergenic | 30.0% | |
| TAGATTGATCCAAATCCATT+TGG | - | chr3_3:55023071-55023090 | None:intergenic | 30.0% | |
| AATCAATAAGTCGAAACGGA+TGG | + | chr3_3:55021055-55021074 | Msa0458840:CDS | 35.0% | |
| CTATAGAACTTATACCCTTG+AGG | + | chr3_3:55021234-55021253 | Msa0458840:intron | 35.0% | |
| ! | TTTTCGTCGACATACATGAT+TGG | + | chr3_3:55021275-55021294 | Msa0458840:intron | 35.0% |
| ! | TTTTCAAAAACGGGCAAAGT+CGG | + | chr3_3:55021604-55021623 | Msa0458840:intron | 35.0% |
| ATATGCACTCTCGTTCAATT+TGG | + | chr3_3:55021895-55021914 | Msa0458840:intron | 35.0% | |
| !! | TGGTGGATCTATATAGCTTT+TGG | + | chr3_3:55022598-55022617 | Msa0458840:CDS | 35.0% |
| GAAGTATGAGAAAGCAATGA+TGG | + | chr3_3:55022647-55022666 | Msa0458840:CDS | 35.0% | |
| CCAACATTATAGTTACGAGT+AGG | - | chr3_3:55022717-55022736 | None:intergenic | 35.0% | |
| CCTACTCGTAACTATAATGT+TGG | + | chr3_3:55022714-55022733 | Msa0458840:CDS | 35.0% | |
| TAATCAGAGGTTGGATTCAA+TGG | + | chr3_3:55022800-55022819 | Msa0458840:CDS | 35.0% | |
| AAATGGAGCTGAAGCTATAA+AGG | + | chr3_3:55022848-55022867 | Msa0458840:CDS | 35.0% | |
| ! | CATGTTAGTCTCATAACCAT+GGG | - | chr3_3:55022961-55022980 | None:intergenic | 35.0% |
| ! | TCATGTTAGTCTCATAACCA+TGG | - | chr3_3:55022962-55022981 | None:intergenic | 35.0% |
| !!! | GATTTTGATTTCGACCCAAA+TGG | + | chr3_3:55023053-55023072 | Msa0458840:CDS | 35.0% |
| AATCAATAAGTCGAAACGGA+TGG | + | chr3_3:55021055-55021074 | Msa0458840:CDS | 35.0% | |
| CTATAGAACTTATACCCTTG+AGG | + | chr3_3:55021234-55021253 | Msa0458840:intron | 35.0% | |
| ! | TTTTCGTCGACATACATGAT+TGG | + | chr3_3:55021275-55021294 | Msa0458840:intron | 35.0% |
| ! | TTTTCAAAAACGGGCAAAGT+CGG | + | chr3_3:55021604-55021623 | Msa0458840:intron | 35.0% |
| ATATGCACTCTCGTTCAATT+TGG | + | chr3_3:55021895-55021914 | Msa0458840:intron | 35.0% | |
| !! | TGGTGGATCTATATAGCTTT+TGG | + | chr3_3:55022598-55022617 | Msa0458840:CDS | 35.0% |
| GAAGTATGAGAAAGCAATGA+TGG | + | chr3_3:55022647-55022666 | Msa0458840:CDS | 35.0% | |
| CCAACATTATAGTTACGAGT+AGG | - | chr3_3:55022717-55022736 | None:intergenic | 35.0% | |
| CCTACTCGTAACTATAATGT+TGG | + | chr3_3:55022714-55022733 | Msa0458840:CDS | 35.0% | |
| TAATCAGAGGTTGGATTCAA+TGG | + | chr3_3:55022800-55022819 | Msa0458840:CDS | 35.0% | |
| AAATGGAGCTGAAGCTATAA+AGG | + | chr3_3:55022848-55022867 | Msa0458840:CDS | 35.0% | |
| ! | CATGTTAGTCTCATAACCAT+GGG | - | chr3_3:55022961-55022980 | None:intergenic | 35.0% |
| ! | TCATGTTAGTCTCATAACCA+TGG | - | chr3_3:55022962-55022981 | None:intergenic | 35.0% |
| !!! | GATTTTGATTTCGACCCAAA+TGG | + | chr3_3:55023053-55023072 | Msa0458840:CDS | 35.0% |
| AATGAATTGAGCACCCTTTG+TGG | + | chr3_3:55022447-55022466 | Msa0458840:CDS | 40.0% | |
| ATGAATTGAGCACCCTTTGT+GGG | + | chr3_3:55022448-55022467 | Msa0458840:CDS | 40.0% | |
| TGCTTTCTCATACTTCTCTC+TGG | - | chr3_3:55022643-55022662 | None:intergenic | 40.0% | |
| GAAGGAAGTTAATCAGAGGT+TGG | + | chr3_3:55022791-55022810 | Msa0458840:CDS | 40.0% | |
| TCCATTTACAACCTGCTCAT+GGG | - | chr3_3:55022835-55022854 | None:intergenic | 40.0% | |
| AATCATCAAATGGTGGCATG+AGG | - | chr3_3:55023025-55023044 | None:intergenic | 40.0% | |
| ! | GATTTCGACCCAAATGGATT+TGG | + | chr3_3:55023059-55023078 | Msa0458840:CDS | 40.0% |
| AATGAATTGAGCACCCTTTG+TGG | + | chr3_3:55022447-55022466 | Msa0458840:CDS | 40.0% | |
| ATGAATTGAGCACCCTTTGT+GGG | + | chr3_3:55022448-55022467 | Msa0458840:CDS | 40.0% | |
| TGCTTTCTCATACTTCTCTC+TGG | - | chr3_3:55022643-55022662 | None:intergenic | 40.0% | |
| GAAGGAAGTTAATCAGAGGT+TGG | + | chr3_3:55022791-55022810 | Msa0458840:CDS | 40.0% | |
| TCCATTTACAACCTGCTCAT+GGG | - | chr3_3:55022835-55022854 | None:intergenic | 40.0% | |
| AATCATCAAATGGTGGCATG+AGG | - | chr3_3:55023025-55023044 | None:intergenic | 40.0% | |
| ! | GATTTCGACCCAAATGGATT+TGG | + | chr3_3:55023059-55023078 | Msa0458840:CDS | 40.0% |
| GTAATGACAGTGACCGCTAT+AGG | - | chr3_3:55022070-55022089 | None:intergenic | 45.0% | |
| GCGGTCACTGTCATTACAAA+TGG | + | chr3_3:55022073-55022092 | Msa0458840:intron | 45.0% | |
| TGAATTGAGCACCCTTTGTG+GGG | + | chr3_3:55022449-55022468 | Msa0458840:CDS | 45.0% | |
| ACATACCTCTACCCCACAAA+GGG | - | chr3_3:55022463-55022482 | None:intergenic | 45.0% | |
| ACCATGGTCAAGCAGAAGTT+TGG | + | chr3_3:55022502-55022521 | Msa0458840:CDS | 45.0% | |
| CTCCATTTACAACCTGCTCA+TGG | - | chr3_3:55022836-55022855 | None:intergenic | 45.0% | |
| GGAGCTGAAGCTATAAAGGA+TGG | + | chr3_3:55022852-55022871 | Msa0458840:CDS | 45.0% | |
| AGGAGATACACGGGATAACA+TGG | + | chr3_3:55022920-55022939 | Msa0458840:CDS | 45.0% | |
| TACACGGGATAACATGGATG+AGG | + | chr3_3:55022926-55022945 | Msa0458840:CDS | 45.0% | |
| GAGTGATGAGCAACTACCTA+TGG | + | chr3_3:55022995-55023014 | Msa0458840:CDS | 45.0% | |
| GTAATGACAGTGACCGCTAT+AGG | - | chr3_3:55022070-55022089 | None:intergenic | 45.0% | |
| GCGGTCACTGTCATTACAAA+TGG | + | chr3_3:55022073-55022092 | Msa0458840:intron | 45.0% | |
| TGAATTGAGCACCCTTTGTG+GGG | + | chr3_3:55022449-55022468 | Msa0458840:CDS | 45.0% | |
| ACATACCTCTACCCCACAAA+GGG | - | chr3_3:55022463-55022482 | None:intergenic | 45.0% | |
| ACCATGGTCAAGCAGAAGTT+TGG | + | chr3_3:55022502-55022521 | Msa0458840:CDS | 45.0% | |
| CTCCATTTACAACCTGCTCA+TGG | - | chr3_3:55022836-55022855 | None:intergenic | 45.0% | |
| GGAGCTGAAGCTATAAAGGA+TGG | + | chr3_3:55022852-55022871 | Msa0458840:CDS | 45.0% | |
| AGGAGATACACGGGATAACA+TGG | + | chr3_3:55022920-55022939 | Msa0458840:CDS | 45.0% | |
| TACACGGGATAACATGGATG+AGG | + | chr3_3:55022926-55022945 | Msa0458840:CDS | 45.0% | |
| GAGTGATGAGCAACTACCTA+TGG | + | chr3_3:55022995-55023014 | Msa0458840:CDS | 45.0% | |
| !!! | TTAAAATTTTTTATTTGATT+CGG | - | chr3_3:55021650-55021669 | None:intergenic | 5.0% |
| !!! | TCAAATAAAAAATTTTAAAT+TGG | + | chr3_3:55021652-55021671 | Msa0458840:intron | 5.0% |
| !!! | TTAAAATTTTTTATTTGATT+CGG | - | chr3_3:55021650-55021669 | None:intergenic | 5.0% |
| !!! | TCAAATAAAAAATTTTAAAT+TGG | + | chr3_3:55021652-55021671 | Msa0458840:intron | 5.0% |
| ! | GTTTTACAGTGGGGCCTCAA+GGG | - | chr3_3:55021251-55021270 | None:intergenic | 50.0% |
| ! | AGTTTTACAGTGGGGCCTCA+AGG | - | chr3_3:55021252-55021271 | None:intergenic | 50.0% |
| TCAAAAACGGGCAAAGTCGG+TGG | + | chr3_3:55021607-55021626 | Msa0458840:intron | 50.0% | |
| CACATACCTCTACCCCACAA+AGG | - | chr3_3:55022464-55022483 | None:intergenic | 50.0% | |
| GCCAAACTTCTGCTTGACCA+TGG | - | chr3_3:55022506-55022525 | None:intergenic | 50.0% | |
| CACACGTTCTAGTCCTATCG+CGG | - | chr3_3:55022532-55022551 | None:intergenic | 50.0% | |
| TACAACCTGCTCATGGGCTT+GGG | - | chr3_3:55022829-55022848 | None:intergenic | 50.0% | |
| TTACAACCTGCTCATGGGCT+TGG | - | chr3_3:55022830-55022849 | None:intergenic | 50.0% | |
| GCCCATGAGCAGGTTGTAAA+TGG | + | chr3_3:55022831-55022850 | Msa0458840:CDS | 50.0% | |
| GATGAGGTTGCTGATACCCA+TGG | + | chr3_3:55022942-55022961 | Msa0458840:CDS | 50.0% | |
| ! | GTTTTACAGTGGGGCCTCAA+GGG | - | chr3_3:55021251-55021270 | None:intergenic | 50.0% |
| ! | AGTTTTACAGTGGGGCCTCA+AGG | - | chr3_3:55021252-55021271 | None:intergenic | 50.0% |
| TCAAAAACGGGCAAAGTCGG+TGG | + | chr3_3:55021607-55021626 | Msa0458840:intron | 50.0% | |
| CACATACCTCTACCCCACAA+AGG | - | chr3_3:55022464-55022483 | None:intergenic | 50.0% | |
| GCCAAACTTCTGCTTGACCA+TGG | - | chr3_3:55022506-55022525 | None:intergenic | 50.0% | |
| CACACGTTCTAGTCCTATCG+CGG | - | chr3_3:55022532-55022551 | None:intergenic | 50.0% | |
| TACAACCTGCTCATGGGCTT+GGG | - | chr3_3:55022829-55022848 | None:intergenic | 50.0% | |
| TTACAACCTGCTCATGGGCT+TGG | - | chr3_3:55022830-55022849 | None:intergenic | 50.0% | |
| GCCCATGAGCAGGTTGTAAA+TGG | + | chr3_3:55022831-55022850 | Msa0458840:CDS | 50.0% | |
| GATGAGGTTGCTGATACCCA+TGG | + | chr3_3:55022942-55022961 | Msa0458840:CDS | 50.0% | |
| ! | GATCTTCGGTGTGTGTCCCA+AGG | + | chr3_3:55021208-55021227 | Msa0458840:intron | 55.0% |
| GAAGTTTGGCCATCCGCGAT+AGG | + | chr3_3:55022516-55022535 | Msa0458840:CDS | 55.0% | |
| CGTTCTAGTCCTATCGCGGA+TGG | - | chr3_3:55022528-55022547 | None:intergenic | 55.0% | |
| ! | ATTGCTCAAGTGCCGCTGAG+TGG | + | chr3_3:55022897-55022916 | Msa0458840:CDS | 55.0% |
| CGTGTATCTCCTCCACTCAG+CGG | - | chr3_3:55022912-55022931 | None:intergenic | 55.0% | |
| CGCTGAGTGGAGGAGATACA+CGG | + | chr3_3:55022910-55022929 | Msa0458840:CDS | 55.0% | |
| GCTGAGTGGAGGAGATACAC+GGG | + | chr3_3:55022911-55022930 | Msa0458840:CDS | 55.0% | |
| GGTGGCATGAGGAAGTCCAT+AGG | - | chr3_3:55023014-55023033 | None:intergenic | 55.0% | |
| ! | GATCTTCGGTGTGTGTCCCA+AGG | + | chr3_3:55021208-55021227 | Msa0458840:intron | 55.0% |
| GAAGTTTGGCCATCCGCGAT+AGG | + | chr3_3:55022516-55022535 | Msa0458840:CDS | 55.0% | |
| CGTTCTAGTCCTATCGCGGA+TGG | - | chr3_3:55022528-55022547 | None:intergenic | 55.0% | |
| ! | ATTGCTCAAGTGCCGCTGAG+TGG | + | chr3_3:55022897-55022916 | Msa0458840:CDS | 55.0% |
| CGTGTATCTCCTCCACTCAG+CGG | - | chr3_3:55022912-55022931 | None:intergenic | 55.0% | |
| CGCTGAGTGGAGGAGATACA+CGG | + | chr3_3:55022910-55022929 | Msa0458840:CDS | 55.0% | |
| GCTGAGTGGAGGAGATACAC+GGG | + | chr3_3:55022911-55022930 | Msa0458840:CDS | 55.0% | |
| GGTGGCATGAGGAAGTCCAT+AGG | - | chr3_3:55023014-55023033 | None:intergenic | 55.0% | |
| GAGCACCCTTTGTGGGGTAG+AGG | + | chr3_3:55022455-55022474 | Msa0458840:CDS | 60.0% | |
| GGTAACCCAAGCCCATGAGC+AGG | + | chr3_3:55022821-55022840 | Msa0458840:CDS | 60.0% | |
| GAGCACCCTTTGTGGGGTAG+AGG | + | chr3_3:55022455-55022474 | Msa0458840:CDS | 60.0% | |
| GGTAACCCAAGCCCATGAGC+AGG | + | chr3_3:55022821-55022840 | Msa0458840:CDS | 60.0% | |
| ! | GCTCAAGTGCCGCTGAGTGG+AGG | + | chr3_3:55022900-55022919 | Msa0458840:CDS | 65.0% |
| ! | GCTCAAGTGCCGCTGAGTGG+AGG | + | chr3_3:55022900-55022919 | Msa0458840:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 55021023 | 55023091 | 55021023 | ID=Msa0458840;Name=Msa0458840 |
| chr3_3 | mRNA | 55021023 | 55023091 | 55021023 | ID=Msa0458840-mRNA-1;Parent=Msa0458840;Name=Msa0458840-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|0|0.5|2|0|246 |
| chr3_3 | exon | 55021023 | 55021101 | 55021023 | ID=Msa0458840-mRNA-1:exon:10864;Parent=Msa0458840-mRNA-1 |
| chr3_3 | exon | 55022430 | 55023091 | 55022430 | ID=Msa0458840-mRNA-1:exon:10865;Parent=Msa0458840-mRNA-1 |
| chr3_3 | CDS | 55021023 | 55021101 | 55021023 | ID=Msa0458840-mRNA-1:cds;Parent=Msa0458840-mRNA-1 |
| chr3_3 | CDS | 55022430 | 55023091 | 55022430 | ID=Msa0458840-mRNA-1:cds;Parent=Msa0458840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
