Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459250 | RDY10356.1 | 33.518 | 361 | 197 | 8 | 1 | 318 | 281 | 641 | 4.81e-43 | 168 |
| Msa0459250 | RDY10356.1 | 34.794 | 388 | 178 | 10 | 3 | 318 | 50 | 434 | 3.65e-58 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459250 | sp|Q9FJK3|AGL80_ARATH | 49.573 | 117 | 48 | 1 | 3 | 108 | 5 | 121 | 1.67e-23 | 101 |
| Msa0459250 | sp|Q9FJK3|AGL80_ARATH | 41.129 | 124 | 71 | 2 | 196 | 318 | 32 | 154 | 4.94e-22 | 97.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459250 | A0A371I5P7 | 33.518 | 361 | 197 | 8 | 1 | 318 | 281 | 641 | 2.30e-43 | 168 |
| Msa0459250 | A0A371I5P7 | 34.794 | 388 | 178 | 10 | 3 | 318 | 50 | 434 | 1.74e-58 | 209 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0459250 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459250 | MtrunA17_Chr4g0014321 | 46.575 | 219 | 90 | 3 | 3 | 194 | 5 | 223 | 8.52e-60 | 191 |
| Msa0459250 | MtrunA17_Chr4g0014321 | 35.772 | 123 | 78 | 1 | 196 | 317 | 32 | 154 | 1.92e-20 | 88.6 |
| Msa0459250 | MtrunA17_Chr8g0351751 | 46.256 | 227 | 84 | 4 | 3 | 191 | 5 | 231 | 2.53e-53 | 175 |
| Msa0459250 | MtrunA17_Chr8g0351751 | 38.095 | 126 | 75 | 2 | 196 | 318 | 32 | 157 | 1.60e-15 | 75.1 |
| Msa0459250 | MtrunA17_Chr4g0013041 | 48.128 | 187 | 81 | 4 | 3 | 176 | 5 | 188 | 2.31e-47 | 158 |
| Msa0459250 | MtrunA17_Chr4g0013041 | 34.146 | 123 | 80 | 1 | 196 | 317 | 30 | 152 | 1.06e-17 | 80.1 |
| Msa0459250 | MtrunA17_Chr2g0296861 | 66.929 | 127 | 42 | 0 | 196 | 322 | 32 | 158 | 9.26e-45 | 150 |
| Msa0459250 | MtrunA17_Chr2g0296861 | 39.516 | 124 | 64 | 1 | 4 | 116 | 6 | 129 | 3.91e-17 | 77.4 |
| Msa0459250 | MtrunA17_Chr4g0014031 | 41.667 | 228 | 90 | 4 | 3 | 196 | 5 | 223 | 6.61e-42 | 145 |
| Msa0459250 | MtrunA17_Chr4g0014031 | 39.516 | 124 | 74 | 1 | 196 | 318 | 32 | 155 | 2.27e-22 | 93.6 |
| Msa0459250 | MtrunA17_Chr4g0014131 | 44.255 | 235 | 78 | 7 | 2 | 196 | 4 | 225 | 1.87e-40 | 141 |
| Msa0459250 | MtrunA17_Chr4g0014131 | 37.121 | 132 | 82 | 1 | 196 | 326 | 32 | 163 | 1.16e-20 | 89.0 |
| Msa0459250 | MtrunA17_Chr3g0110131 | 42.358 | 229 | 93 | 6 | 3 | 194 | 5 | 231 | 8.80e-39 | 137 |
| Msa0459250 | MtrunA17_Chr3g0110131 | 41.463 | 123 | 72 | 0 | 196 | 318 | 32 | 154 | 3.48e-26 | 104 |
| Msa0459250 | MtrunA17_Chr3g0107381 | 38.889 | 216 | 104 | 6 | 3 | 194 | 5 | 216 | 3.03e-35 | 127 |
| Msa0459250 | MtrunA17_Chr3g0107381 | 44.186 | 129 | 72 | 0 | 196 | 324 | 32 | 160 | 1.02e-30 | 115 |
| Msa0459250 | MtrunA17_Chr2g0296831 | 59.829 | 117 | 36 | 1 | 3 | 108 | 5 | 121 | 1.60e-33 | 120 |
| Msa0459250 | MtrunA17_Chr2g0296831 | 38.636 | 88 | 54 | 0 | 196 | 283 | 32 | 119 | 1.01e-16 | 75.5 |
| Msa0459250 | MtrunA17_Chr3g0107461 | 47.692 | 130 | 67 | 1 | 196 | 324 | 32 | 161 | 1.60e-33 | 121 |
| Msa0459250 | MtrunA17_Chr3g0107461 | 36.232 | 138 | 75 | 2 | 2 | 128 | 4 | 139 | 1.66e-21 | 89.4 |
| Msa0459250 | MtrunA17_Chr3g0107331 | 45.968 | 124 | 56 | 1 | 3 | 115 | 4 | 127 | 2.25e-31 | 115 |
| Msa0459250 | MtrunA17_Chr3g0107331 | 37.190 | 121 | 76 | 0 | 196 | 316 | 31 | 151 | 1.04e-18 | 82.0 |
| Msa0459250 | MtrunA17_Chr3g0105791 | 45.802 | 131 | 70 | 1 | 196 | 325 | 4 | 134 | 3.60e-31 | 114 |
| Msa0459250 | MtrunA17_Chr3g0105791 | 35.862 | 145 | 75 | 3 | 27 | 160 | 1 | 138 | 1.51e-16 | 75.5 |
| Msa0459250 | MtrunA17_Chr3g0107351 | 45.968 | 124 | 56 | 1 | 3 | 115 | 4 | 127 | 9.24e-31 | 114 |
| Msa0459250 | MtrunA17_Chr3g0107351 | 31.148 | 122 | 84 | 0 | 196 | 317 | 31 | 152 | 6.17e-14 | 68.6 |
| Msa0459250 | MtrunA17_Chr4g0031421 | 43.939 | 132 | 73 | 1 | 196 | 326 | 4 | 135 | 1.99e-30 | 112 |
| Msa0459250 | MtrunA17_Chr4g0031421 | 41.748 | 103 | 49 | 1 | 27 | 118 | 1 | 103 | 2.74e-17 | 77.4 |
| Msa0459250 | MtrunA17_Chr3g0107361 | 45.161 | 124 | 57 | 1 | 3 | 115 | 4 | 127 | 2.41e-30 | 112 |
| Msa0459250 | MtrunA17_Chr3g0107361 | 32.787 | 122 | 82 | 0 | 196 | 317 | 31 | 152 | 3.76e-14 | 69.3 |
| Msa0459250 | MtrunA17_Chr3g0107341 | 45.161 | 124 | 57 | 1 | 3 | 115 | 4 | 127 | 4.04e-30 | 112 |
| Msa0459250 | MtrunA17_Chr3g0107341 | 30.508 | 118 | 82 | 0 | 196 | 313 | 31 | 148 | 1.33e-11 | 62.0 |
| Msa0459250 | MtrunA17_Chr3g0106421 | 45.312 | 128 | 69 | 1 | 197 | 323 | 5 | 132 | 6.68e-26 | 102 |
| Msa0459250 | MtrunA17_Chr3g0106421 | 40.000 | 95 | 46 | 1 | 27 | 110 | 1 | 95 | 1.37e-13 | 68.9 |
| Msa0459250 | MtrunA17_Chr4g0014121 | 51.181 | 127 | 51 | 1 | 3 | 118 | 33 | 159 | 3.72e-25 | 100 |
| Msa0459250 | MtrunA17_Chr4g0014121 | 37.903 | 124 | 76 | 1 | 196 | 318 | 60 | 183 | 5.39e-21 | 89.0 |
| Msa0459250 | MtrunA17_Chr2g0283941 | 45.185 | 135 | 67 | 3 | 196 | 325 | 32 | 164 | 3.10e-24 | 99.0 |
| Msa0459250 | MtrunA17_Chr2g0283941 | 36.752 | 117 | 63 | 1 | 3 | 108 | 5 | 121 | 7.05e-18 | 81.6 |
| Msa0459250 | MtrunA17_Chr5g0432691 | 35.246 | 122 | 79 | 0 | 196 | 317 | 32 | 153 | 1.29e-23 | 95.1 |
| Msa0459250 | MtrunA17_Chr5g0432691 | 40.000 | 120 | 61 | 1 | 3 | 111 | 5 | 124 | 1.36e-20 | 87.0 |
| Msa0459250 | MtrunA17_Chr1g0197461 | 39.098 | 133 | 69 | 2 | 3 | 124 | 4 | 135 | 5.01e-22 | 90.9 |
| Msa0459250 | MtrunA17_Chr1g0197461 | 29.365 | 126 | 88 | 1 | 196 | 321 | 31 | 155 | 5.08e-12 | 63.2 |
| Msa0459250 | MtrunA17_Chr5g0420351 | 40.984 | 122 | 60 | 2 | 3 | 113 | 5 | 125 | 9.98e-22 | 89.7 |
| Msa0459250 | MtrunA17_Chr5g0420351 | 31.200 | 125 | 85 | 1 | 196 | 320 | 32 | 155 | 2.12e-12 | 64.3 |
| Msa0459250 | MtrunA17_Chr1g0197261 | 37.838 | 111 | 57 | 2 | 3 | 102 | 5 | 114 | 1.36e-19 | 84.0 |
| Msa0459250 | MtrunA17_Chr1g0197261 | 31.200 | 125 | 85 | 1 | 196 | 320 | 32 | 155 | 3.86e-13 | 66.2 |
| Msa0459250 | MtrunA17_Chr3g0106501 | 37.121 | 132 | 80 | 2 | 196 | 324 | 4 | 135 | 4.73e-18 | 79.7 |
| Msa0459250 | MtrunA17_Chr3g0106501 | 41.860 | 86 | 39 | 1 | 27 | 101 | 1 | 86 | 1.63e-13 | 67.4 |
| Msa0459250 | MtrunA17_Chr1g0188681 | 39.091 | 110 | 57 | 2 | 3 | 102 | 5 | 114 | 1.14e-17 | 79.0 |
| Msa0459250 | MtrunA17_Chr1g0188681 | 30.328 | 122 | 84 | 1 | 196 | 317 | 32 | 152 | 9.24e-12 | 62.4 |
| Msa0459250 | MtrunA17_Chr1g0197321 | 37.984 | 129 | 64 | 3 | 3 | 120 | 5 | 128 | 2.00e-17 | 78.2 |
| Msa0459250 | MtrunA17_Chr1g0188661 | 31.967 | 122 | 82 | 1 | 196 | 317 | 32 | 152 | 1.50e-16 | 75.9 |
| Msa0459250 | MtrunA17_Chr1g0188661 | 39.640 | 111 | 55 | 2 | 3 | 102 | 5 | 114 | 2.00e-14 | 70.1 |
| Msa0459250 | MtrunA17_Chr4g0012761 | 34.426 | 122 | 79 | 1 | 196 | 317 | 32 | 152 | 1.56e-16 | 75.9 |
| Msa0459250 | MtrunA17_Chr4g0012761 | 35.246 | 122 | 67 | 2 | 3 | 113 | 5 | 125 | 2.29e-13 | 67.0 |
| Msa0459250 | MtrunA17_Chr7g0218151 | 33.607 | 122 | 80 | 1 | 196 | 317 | 32 | 152 | 3.84e-16 | 74.7 |
| Msa0459250 | MtrunA17_Chr7g0218151 | 37.705 | 122 | 64 | 2 | 3 | 113 | 5 | 125 | 1.33e-14 | 70.5 |
| Msa0459250 | MtrunA17_Chr1g0193311 | 40.708 | 113 | 55 | 2 | 3 | 104 | 5 | 116 | 1.21e-15 | 73.2 |
| Msa0459250 | MtrunA17_Chr1g0193311 | 32.520 | 123 | 82 | 1 | 196 | 318 | 32 | 153 | 2.41e-14 | 69.7 |
| Msa0459250 | MtrunA17_Chr1g0188651 | 42.342 | 111 | 52 | 2 | 3 | 102 | 5 | 114 | 5.67e-14 | 68.6 |
| Msa0459250 | MtrunA17_Chr7g0267601 | 31.200 | 125 | 75 | 1 | 3 | 116 | 8 | 132 | 1.47e-13 | 71.2 |
| Msa0459250 | MtrunA17_Chr3g0128721 | 30.894 | 123 | 74 | 1 | 3 | 114 | 8 | 130 | 5.88e-13 | 69.3 |
| Msa0459250 | MtrunA17_Chr4g0008701 | 32.174 | 115 | 67 | 1 | 9 | 112 | 14 | 128 | 6.07e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459250 | AT5G48670.1 | 49.573 | 117 | 48 | 1 | 3 | 108 | 5 | 121 | 1.70e-24 | 101 |
| Msa0459250 | AT5G48670.1 | 41.129 | 124 | 71 | 2 | 196 | 318 | 32 | 154 | 5.02e-23 | 97.8 |
| Msa0459250 | AT1G65330.1 | 44.915 | 118 | 54 | 1 | 2 | 108 | 3 | 120 | 7.69e-24 | 99.0 |
| Msa0459250 | AT1G65330.1 | 36.641 | 131 | 81 | 2 | 196 | 325 | 31 | 160 | 3.67e-18 | 83.6 |
| Msa0459250 | AT1G65300.1 | 43.590 | 117 | 55 | 1 | 3 | 108 | 4 | 120 | 2.43e-21 | 92.4 |
| Msa0459250 | AT1G65300.1 | 33.600 | 125 | 83 | 0 | 196 | 320 | 31 | 155 | 1.24e-15 | 76.3 |
| Msa0459250 | AT5G26650.1 | 39.516 | 124 | 63 | 2 | 1 | 113 | 1 | 123 | 8.78e-21 | 92.0 |
| Msa0459250 | AT5G27810.1 | 44.340 | 106 | 44 | 2 | 27 | 121 | 1 | 102 | 1.05e-20 | 86.3 |
| Msa0459250 | AT5G27810.1 | 37.273 | 110 | 68 | 1 | 196 | 305 | 4 | 112 | 7.08e-19 | 81.6 |
| Msa0459250 | AT5G27960.1 | 38.710 | 124 | 64 | 2 | 1 | 113 | 1 | 123 | 2.48e-20 | 90.1 |
| Msa0459250 | AT1G31630.1 | 36.207 | 116 | 64 | 1 | 3 | 108 | 4 | 119 | 1.82e-19 | 88.2 |
| Msa0459250 | AT5G26630.1 | 46.400 | 125 | 56 | 1 | 3 | 116 | 5 | 129 | 3.22e-19 | 85.1 |
| Msa0459250 | AT5G26630.1 | 28.125 | 128 | 92 | 0 | 198 | 325 | 34 | 161 | 1.47e-12 | 66.6 |
| Msa0459250 | AT3G05860.3 | 38.843 | 121 | 62 | 2 | 3 | 112 | 5 | 124 | 8.34e-19 | 84.7 |
| Msa0459250 | AT3G05860.3 | 33.898 | 118 | 78 | 0 | 196 | 313 | 32 | 149 | 5.63e-15 | 73.9 |
| Msa0459250 | AT3G05860.2 | 38.843 | 121 | 62 | 2 | 3 | 112 | 5 | 124 | 1.06e-18 | 83.6 |
| Msa0459250 | AT3G05860.2 | 33.898 | 118 | 78 | 0 | 196 | 313 | 32 | 149 | 2.42e-15 | 73.9 |
| Msa0459250 | AT3G05860.1 | 38.843 | 121 | 62 | 2 | 3 | 112 | 5 | 124 | 1.31e-18 | 84.3 |
| Msa0459250 | AT3G05860.1 | 33.898 | 118 | 78 | 0 | 196 | 313 | 32 | 149 | 5.29e-15 | 74.3 |
| Msa0459250 | AT5G26580.1 | 38.655 | 119 | 57 | 3 | 1 | 113 | 3 | 111 | 2.29e-17 | 82.0 |
| Msa0459250 | AT1G31640.1 | 33.884 | 121 | 69 | 2 | 3 | 113 | 4 | 123 | 6.75e-16 | 78.6 |
| Msa0459250 | AT1G31640.1 | 33.071 | 127 | 80 | 2 | 196 | 320 | 31 | 154 | 4.97e-14 | 72.8 |
| Msa0459250 | AT1G22590.2 | 33.333 | 147 | 75 | 5 | 1 | 134 | 1 | 137 | 3.06e-13 | 67.0 |
| Msa0459250 | AT2G28700.1 | 32.031 | 128 | 74 | 2 | 3 | 117 | 5 | 132 | 7.58e-13 | 68.9 |
Find 74 sgRNAs with CRISPR-Local
Find 578 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTCATTTCATTCTTCT+TGG | 0.187611 | 3_3:+55738844 | None:intergenic |
| ATAATGTCAGCATTATTTAT+AGG | 0.257317 | 3_3:+55746619 | None:intergenic |
| AAGATAAACTGGCGAAATTA+AGG | 0.283159 | 3_3:-55746915 | Msa0459250:CDS |
| CTCCATTTCAATCTTCATCT+TGG | 0.285395 | 3_3:+55738693 | None:intergenic |
| GGAAAACAACGTATAATAAA+AGG | 0.303343 | 3_3:-55747158 | Msa0459250:CDS |
| ATTCATTCATACGGGTGATT+TGG | 0.308720 | 3_3:-55738810 | Msa0459250:CDS |
| CTCTTGATTTGCCATTGGTT+TGG | 0.320764 | 3_3:+55746969 | None:intergenic |
| TTCTTTGTTCGACTTCCTTA+AGG | 0.340784 | 3_3:+55738732 | None:intergenic |
| TTTGTTTCTTTAACTTCTCT+AGG | 0.340953 | 3_3:+55738876 | None:intergenic |
| TCCATTTCAATCTTCATCTT+GGG | 0.367020 | 3_3:+55738694 | None:intergenic |
| CATTGTCATTTCCTCCTTCG+TGG | 0.368598 | 3_3:+55746666 | None:intergenic |
| GGTTTGGTTTGTATAACTTC+AGG | 0.374091 | 3_3:+55746985 | None:intergenic |
| GAAATTAAGGAAGGACAATA+AGG | 0.381252 | 3_3:-55746902 | Msa0459250:CDS |
| CCATTTGGTGAGGTCGATCC+TGG | 0.388167 | 3_3:-55746541 | Msa0459250:CDS |
| CTTTCGCTTTCAAAACCCTT+TGG | 0.399817 | 3_3:+55746935 | None:intergenic |
| TTTGAAAGCGAAAGATAAAC+TGG | 0.405272 | 3_3:-55746926 | Msa0459250:CDS |
| GTGGATGGTGGTGGCGGCAG+TGG | 0.407500 | 3_3:+55746685 | None:intergenic |
| TGAACTTGTCCAACACCATA+TGG | 0.431567 | 3_3:+55738975 | None:intergenic |
| GTCATTTCCTCCTTCGTGGA+TGG | 0.445399 | 3_3:+55746670 | None:intergenic |
| TTGGCAGAAGGTTGGAATCA+TGG | 0.448798 | 3_3:-55746759 | Msa0459250:intron |
| AAGTCAAGACCAACTACAAT+TGG | 0.453077 | 3_3:-55746710 | Msa0459250:CDS |
| TTGTTTCTTTAACTTCTCTA+GGG | 0.453550 | 3_3:+55738877 | None:intergenic |
| TCCTTCGTGGATGGTGGTGG+CGG | 0.456386 | 3_3:+55746679 | None:intergenic |
| TAATGCTGACATTATTGAAA+GGG | 0.458402 | 3_3:-55746611 | Msa0459250:CDS |
| TTTATGAACTTGATGATGAA+TGG | 0.460764 | 3_3:-55746583 | Msa0459250:CDS |
| AATTTGTCAATTCATTCATA+CGG | 0.461709 | 3_3:-55738819 | Msa0459250:CDS |
| GGGGACAATACCATACCATT+TGG | 0.471412 | 3_3:-55746556 | Msa0459250:CDS |
| AATGAAATCACCACCTTATG+TGG | 0.471722 | 3_3:-55739070 | Msa0459250:CDS |
| TCCTCCTTCGTGGATGGTGG+TGG | 0.479379 | 3_3:+55746676 | None:intergenic |
| GCTTATTGTTGAGAACCTTA+AGG | 0.479647 | 3_3:-55738747 | Msa0459250:CDS |
| TATGAAATAAGCACACTTTG+CGG | 0.483205 | 3_3:-55747111 | Msa0459250:CDS |
| TGGCAGAAGGTTGGAATCAT+GGG | 0.486769 | 3_3:-55746758 | Msa0459250:intron |
| ACATACATCAATTCCACATA+AGG | 0.491397 | 3_3:+55739057 | None:intergenic |
| ATTCATACGGGTGATTTGGA+TGG | 0.494001 | 3_3:-55738806 | Msa0459250:CDS |
| AAAGTCTCTTGATTTGCCAT+TGG | 0.500297 | 3_3:+55746964 | None:intergenic |
| CCAAGTGAGTCAAATGGGTC+AGG | 0.508135 | 3_3:-55747214 | None:intergenic |
| ATTTGTCAATTCATTCATAC+GGG | 0.508251 | 3_3:-55738818 | Msa0459250:CDS |
| AGCAGTATCATTCACTATGA+AGG | 0.516140 | 3_3:+55747182 | None:intergenic |
| CCAGGATCGACCTCACCAAA+TGG | 0.517194 | 3_3:+55746541 | None:intergenic |
| TTTGATCAATGTCTCTATGC+AGG | 0.519430 | 3_3:-55746859 | Msa0459250:CDS |
| TGATGAATCATGGCCATGTT+GGG | 0.528819 | 3_3:-55746645 | Msa0459250:CDS |
| GAAATGACAATGATGAATCA+TGG | 0.532058 | 3_3:-55746655 | Msa0459250:CDS |
| AAAATCGATGGTGGATCATG+AGG | 0.544806 | 3_3:-55738927 | Msa0459250:CDS |
| AACTTGATGATGAATGGTGA+TGG | 0.556175 | 3_3:-55746577 | Msa0459250:CDS |
| ATCGACCTCACCAAATGGTA+TGG | 0.558202 | 3_3:+55746546 | None:intergenic |
| AGAGACTTTCATGAGCCAAA+GGG | 0.559426 | 3_3:-55746950 | Msa0459250:CDS |
| ATAATGCTGACATTATTGAA+AGG | 0.562300 | 3_3:-55746612 | Msa0459250:CDS |
| ATCACCATGTGAAGTCGAAA+GGG | 0.562914 | 3_3:-55747031 | Msa0459250:CDS |
| GCAGTGGAACCAATTGTAGT+TGG | 0.563775 | 3_3:+55746701 | None:intergenic |
| GGTGATTTGGATGGAAATGT+TGG | 0.570032 | 3_3:-55738797 | Msa0459250:CDS |
| AAGAGACTTTCATGAGCCAA+AGG | 0.572517 | 3_3:-55746951 | Msa0459250:CDS |
| TATTTATAGGCAACCCAACA+TGG | 0.573445 | 3_3:+55746632 | None:intergenic |
| CTTTCGACTTCACATGGTGA+TGG | 0.579657 | 3_3:+55747033 | None:intergenic |
| TCATAGTGAATGATACTGCT+AGG | 0.580582 | 3_3:-55747179 | Msa0459250:CDS |
| CATCACCATGTGAAGTCGAA+AGG | 0.582343 | 3_3:-55747032 | Msa0459250:CDS |
| AAGTCGAACAAAGAATCGAA+TGG | 0.588974 | 3_3:-55738724 | Msa0459250:CDS |
| AGCACCCTTTCGACTTCACA+TGG | 0.589309 | 3_3:+55747027 | None:intergenic |
| ATGATGAATCATGGCCATGT+TGG | 0.605921 | 3_3:-55746646 | Msa0459250:CDS |
| ATTTCCTCCTTCGTGGATGG+TGG | 0.610109 | 3_3:+55746673 | None:intergenic |
| ACTTGATGATGAATGGTGAT+GGG | 0.613677 | 3_3:-55746576 | Msa0459250:CDS |
| AAATCGATGGTGGATCATGA+GGG | 0.613825 | 3_3:-55738926 | Msa0459250:CDS |
| TGTATGTGGTATAATCTATG+AGG | 0.618109 | 3_3:-55739041 | Msa0459250:CDS |
| GCCACCACCATCCACGAAGG+AGG | 0.620743 | 3_3:-55746677 | Msa0459250:CDS |
| AGTTATACAAACCAAACCAA+TGG | 0.623654 | 3_3:-55746980 | Msa0459250:CDS |
| TACATCAATTCCACATAAGG+TGG | 0.624843 | 3_3:+55739060 | None:intergenic |
| TAAACTGGCGAAATTAAGGA+AGG | 0.626838 | 3_3:-55746911 | Msa0459250:CDS |
| GGAAAACAACACTCAAGCAA+TGG | 0.638025 | 3_3:-55739020 | Msa0459250:CDS |
| ATATGAACGAAGAAAATCGA+TGG | 0.638659 | 3_3:-55738939 | Msa0459250:CDS |
| TGAACGAAGAAAATCGATGG+TGG | 0.640332 | 3_3:-55738936 | Msa0459250:CDS |
| GCCGCCACCACCATCCACGA+AGG | 0.644113 | 3_3:-55746680 | Msa0459250:CDS |
| TTATGTGGAATTGATGTATG+TGG | 0.644295 | 3_3:-55739055 | Msa0459250:CDS |
| TGGATCATGAGGGCTTCTTG+AGG | 0.670340 | 3_3:-55738916 | Msa0459250:CDS |
| CAATACCATACCATTTGGTG+AGG | 0.674087 | 3_3:-55746551 | Msa0459250:CDS |
| CTTGATGATGAATGGTGATG+GGG | 0.675689 | 3_3:-55746575 | Msa0459250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAATTTTAATTTAATA+GGG | + | chr3_3:55740130-55740149 | None:intergenic | 0.0% |
| !!! | TAAATAAATTTTAATTTAAT+AGG | + | chr3_3:55740131-55740150 | None:intergenic | 0.0% |
| !!! | TTAAATATTATTTTAATTAA+TGG | - | chr3_3:55741545-55741564 | Msa0459250:intron | 0.0% |
| !!! | TTTATTTTATAAAATAAAAT+TGG | - | chr3_3:55745581-55745600 | Msa0459250:intron | 0.0% |
| !!! | TTATTTTATAAAATAAAATT+GGG | - | chr3_3:55745582-55745601 | Msa0459250:intron | 0.0% |
| !! | TCATCATAAATTTAAAAATT+TGG | + | chr3_3:55739423-55739442 | None:intergenic | 10.0% |
| !!! | TGATGATTTTTTTTTTTTTT+TGG | - | chr3_3:55739437-55739456 | Msa0459250:intron | 10.0% |
| !!! | GATGATTTTTTTTTTTTTTT+GGG | - | chr3_3:55739438-55739457 | Msa0459250:intron | 10.0% |
| !! | CTAAATTTGATATATTTATA+GGG | + | chr3_3:55740039-55740058 | None:intergenic | 10.0% |
| !! | ACTAAATTTGATATATTTAT+AGG | + | chr3_3:55740040-55740059 | None:intergenic | 10.0% |
| !!! | TAAATTTTTTTGATAGATTT+TGG | - | chr3_3:55740072-55740091 | Msa0459250:intron | 10.0% |
| !!! | TAATTTTATAATTGAAACTA+TGG | + | chr3_3:55741242-55741261 | None:intergenic | 10.0% |
| !! | ATGAATATAAATATGATAAA+GGG | - | chr3_3:55741645-55741664 | Msa0459250:intron | 10.0% |
| !!! | TTTTTTTGAAAAATAAAAGA+AGG | - | chr3_3:55741789-55741808 | Msa0459250:intron | 10.0% |
| !! | AATATTTGTTTCAAAAAAAA+AGG | - | chr3_3:55742663-55742682 | Msa0459250:intron | 10.0% |
| !!! | GTTAATTTTTTTTTTTTGAA+AGG | - | chr3_3:55742709-55742728 | Msa0459250:intron | 10.0% |
| !! | TTAATTAATAAATAAGGATT+CGG | - | chr3_3:55742745-55742764 | Msa0459250:intron | 10.0% |
| !!! | TTTATCTCTAATTATAATTT+TGG | + | chr3_3:55742836-55742855 | None:intergenic | 10.0% |
| !! | TTTGTTTCAAAAAAAAAAAA+AGG | - | chr3_3:55743226-55743245 | Msa0459250:intron | 10.0% |
| !! | TTAATTAATAAATAAGGATT+CGG | - | chr3_3:55742745-55742764 | Msa0459250:intron | 10.0% |
| !!! | TTTATCTCTAATTATAATTT+TGG | + | chr3_3:55742836-55742855 | None:intergenic | 10.0% |
| !!! | AATAATTTTTTTTATAAGCA+AGG | - | chr3_3:55743924-55743943 | Msa0459250:intron | 10.0% |
| !! | ATAACATTATCAATTAATAA+CGG | - | chr3_3:55745345-55745364 | Msa0459250:intron | 10.0% |
| !! | TTATTTATTTATTACAAAGA+GGG | + | chr3_3:55746050-55746069 | None:intergenic | 10.0% |
| !! | TTTATTTATTTATTACAAAG+AGG | + | chr3_3:55746051-55746070 | None:intergenic | 10.0% |
| !!! | TATATTTTTTTACATAAAGC+CGG | + | chr3_3:55739609-55739628 | None:intergenic | 15.0% |
| !!! | ATTTTTTAGATATTGAAGTT+TGG | - | chr3_3:55739656-55739675 | Msa0459250:intron | 15.0% |
| !!! | ATATTTTTCGCAAAATAAAT+GGG | + | chr3_3:55739883-55739902 | None:intergenic | 15.0% |
| !!! | AATATTTTTCGCAAAATAAA+TGG | + | chr3_3:55739884-55739903 | None:intergenic | 15.0% |
| !! | ACCTAAATAAATTTATTCAT+TGG | + | chr3_3:55740499-55740518 | None:intergenic | 15.0% |
| !! | AATGAATAAATTTATTTAGG+TGG | - | chr3_3:55740498-55740517 | Msa0459250:intron | 15.0% |
| !! | ATTAGTAACTAATTTAGTAA+GGG | - | chr3_3:55741214-55741233 | Msa0459250:intron | 15.0% |
| !! | AGTATACCAAAAATTATATT+AGG | - | chr3_3:55741266-55741285 | Msa0459250:intron | 15.0% |
| !!! | TATTCTCCTAATATAATTTT+TGG | + | chr3_3:55741275-55741294 | None:intergenic | 15.0% |
| !! | TTTAAACGAATTAAAAAACA+CGG | + | chr3_3:55741530-55741549 | None:intergenic | 15.0% |
| !! | TTTAATTAATGGTTAAGAAA+AGG | - | chr3_3:55741556-55741575 | Msa0459250:intron | 15.0% |
| !! | TTAATTAATGGTTAAGAAAA+GGG | - | chr3_3:55741557-55741576 | Msa0459250:intron | 15.0% |
| !! | CATGAATATAAATATGATAA+AGG | - | chr3_3:55741644-55741663 | Msa0459250:intron | 15.0% |
| !! | AAAAGAAGGATTATATTAAT+TGG | - | chr3_3:55741803-55741822 | Msa0459250:intron | 15.0% |
| !!! | AAGTCTTTTAAATAAGATTT+GGG | + | chr3_3:55741864-55741883 | None:intergenic | 15.0% |
| !!! | TAAGTCTTTTAAATAAGATT+TGG | + | chr3_3:55741865-55741884 | None:intergenic | 15.0% |
| !!! | AAAAAGTGGTTTTTTTAATA+GGG | + | chr3_3:55741933-55741952 | None:intergenic | 15.0% |
| !!! | TAAAAAGTGGTTTTTTTAAT+AGG | + | chr3_3:55741934-55741953 | None:intergenic | 15.0% |
| !! | TTAATTATAATATACACATG+TGG | + | chr3_3:55742091-55742110 | None:intergenic | 15.0% |
| !! | TAAAGAAACAAAAAAGAAAA+AGG | - | chr3_3:55742108-55742127 | Msa0459250:intron | 15.0% |
| !!! | TTTTTTCTTTTGATAATAAG+TGG | + | chr3_3:55742224-55742243 | None:intergenic | 15.0% |
| !! | ATCAAAAGAAAAAAAAACTA+TGG | - | chr3_3:55742230-55742249 | Msa0459250:intron | 15.0% |
| !!! | TTTTTATGAAGCAAATATTT+TGG | + | chr3_3:55742557-55742576 | None:intergenic | 15.0% |
| !! | ATATTTGCTTCATAAAAAAA+AGG | - | chr3_3:55742559-55742578 | Msa0459250:intron | 15.0% |
| !! | GTTAGGTTAATTAATAAATA+AGG | - | chr3_3:55742739-55742758 | Msa0459250:intron | 15.0% |
| !! | TAAATATGAAATAGTTGTTT+CGG | - | chr3_3:55742852-55742871 | Msa0459250:intron | 15.0% |
| !! | GATAAATATAATATGATCAA+TGG | - | chr3_3:55742922-55742941 | Msa0459250:intron | 15.0% |
| !!! | TTTTTATGAAGCAAATATTT+TGG | + | chr3_3:55742557-55742576 | None:intergenic | 15.0% |
| !! | TATTTGCTTCATAAAAAAAA+AGG | - | chr3_3:55742560-55742579 | Msa0459250:intron | 15.0% |
| !! | TAAATATGAAATAGTTGTTT+CGG | - | chr3_3:55742852-55742871 | Msa0459250:intron | 15.0% |
| !! | GATAAATATAATATGATCAA+TGG | - | chr3_3:55742922-55742941 | Msa0459250:intron | 15.0% |
| !!! | AAAATGATGAAAACATTTTT+TGG | - | chr3_3:55743716-55743735 | Msa0459250:intron | 15.0% |
| !!! | GAAAGTATAATTAATTAAAG+TGG | - | chr3_3:55745604-55745623 | Msa0459250:intron | 15.0% |
| !!! | CTTTTTAAAATATAAAGAAG+TGG | - | chr3_3:55745914-55745933 | Msa0459250:intron | 15.0% |
| !! | TTCGTTAATATTGATATATT+AGG | + | chr3_3:55746323-55746342 | None:intergenic | 15.0% |
| !!! | AATTTGCTTCATAAAAATTA+AGG | + | chr3_3:55746631-55746650 | None:intergenic | 15.0% |
| !! | ATAATGTCAGCATTATTTAT+AGG | + | chr3_3:55739285-55739304 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTGGGTGTA+TGG | - | chr3_3:55739445-55739464 | Msa0459250:intron | 20.0% |
| !!! | TTTTTTTTTTTTGGGTGTAT+GGG | - | chr3_3:55739446-55739465 | Msa0459250:intron | 20.0% |
| !!! | ATATTTTTTTACATAAAGCC+GGG | + | chr3_3:55739608-55739627 | None:intergenic | 20.0% |
| !!! | TAGAAAATTCGTTTTTACAA+GGG | + | chr3_3:55739841-55739860 | None:intergenic | 20.0% |
| !!! | ATAGAAAATTCGTTTTTACA+AGG | + | chr3_3:55739842-55739861 | None:intergenic | 20.0% |
| !!! | TGTAAAAACGAATTTTCTAT+TGG | - | chr3_3:55739842-55739861 | Msa0459250:intron | 20.0% |
| !! | TTCTATTGGATTGTTAATTA+AGG | - | chr3_3:55739856-55739875 | Msa0459250:intron | 20.0% |
| !!! | TATTTTTCGCAAAATAAATG+GGG | + | chr3_3:55739882-55739901 | None:intergenic | 20.0% |
| !! | ATCTATCAAAAAAATTTACG+AGG | + | chr3_3:55740070-55740089 | None:intergenic | 20.0% |
| !!! | TTTATTTTTAGATTTACCTC+CGG | + | chr3_3:55740407-55740426 | None:intergenic | 20.0% |
| !! | AATAAATTTCGTACATTTAG+AGG | - | chr3_3:55740421-55740440 | Msa0459250:intron | 20.0% |
| !! | GCCAATGAATAAATTTATTT+AGG | - | chr3_3:55740495-55740514 | Msa0459250:intron | 20.0% |
| !! | GATTAGTAACTAATTTAGTA+AGG | - | chr3_3:55741213-55741232 | Msa0459250:intron | 20.0% |
| !!! | TAAAAATGTCGTGATTTTAT+AGG | - | chr3_3:55741362-55741381 | Msa0459250:intron | 20.0% |
| !!! | AATTCAATCAAACTCAATTT+TGG | + | chr3_3:55741757-55741776 | None:intergenic | 20.0% |
| !! | AGGATTATATTAATTGGAAA+TGG | - | chr3_3:55741809-55741828 | Msa0459250:intron | 20.0% |
| !! | AGAAAATCCAAAAGAAATTT+GGG | + | chr3_3:55741837-55741856 | None:intergenic | 20.0% |
| !! | AAGAAAATCCAAAAGAAATT+TGG | + | chr3_3:55741838-55741857 | None:intergenic | 20.0% |
| !!! | AAAAGTGGTTTTTTTAATAG+GGG | + | chr3_3:55741932-55741951 | None:intergenic | 20.0% |
| !! | ACCTTAAAGTTGAAAAAAAA+GGG | + | chr3_3:55741971-55741990 | None:intergenic | 20.0% |
| !! | TAATTGAAAAATAATGCATG+TGG | + | chr3_3:55742052-55742071 | None:intergenic | 20.0% |
| !! | AACAAAAAAGAAAAAGGTAA+TGG | - | chr3_3:55742114-55742133 | Msa0459250:intron | 20.0% |
| !! | ACAAAAAAGAAAAAGGTAAT+GGG | - | chr3_3:55742115-55742134 | Msa0459250:intron | 20.0% |
| !! | ATTTGTTTCAAAAAAAAAGG+AGG | - | chr3_3:55742666-55742685 | Msa0459250:intron | 20.0% |
| !!! | AATTTGTTTTCCTATAGTTT+TGG | + | chr3_3:55742775-55742794 | None:intergenic | 20.0% |
| !! | AACTATAGGAAAACAAATTT+CGG | - | chr3_3:55742776-55742795 | Msa0459250:intron | 20.0% |
| !!! | AGTGAATTGATAACAAATTT+CGG | - | chr3_3:55742804-55742823 | Msa0459250:intron | 20.0% |
| !!! | TAAATACGAAATAGTTGTTT+TGG | - | chr3_3:55742888-55742907 | Msa0459250:intron | 20.0% |
| !! | GTTTCAAAAAAAAAAAAAGG+AGG | - | chr3_3:55743229-55743248 | Msa0459250:intron | 20.0% |
| !! | GCTAGGTTAATTAATAAATA+AGG | - | chr3_3:55743304-55743323 | Msa0459250:intron | 20.0% |
| !!! | AATTTGTTTTCCTATAGTTT+TGG | + | chr3_3:55742775-55742794 | None:intergenic | 20.0% |
| !! | AACTATAGGAAAACAAATTT+CGG | - | chr3_3:55742776-55742795 | Msa0459250:intron | 20.0% |
| !!! | AGTGAATTGATAACAAATTT+CGG | - | chr3_3:55742804-55742823 | Msa0459250:intron | 20.0% |
| !!! | TACAAAGAGTATTTATCAAA+AGG | - | chr3_3:55745752-55745771 | Msa0459250:intron | 20.0% |
| !!! | ACAAAGAGTATTTATCAAAA+GGG | - | chr3_3:55745753-55745772 | Msa0459250:intron | 20.0% |
| !!! | TATTACTTATTTTCTTGCAT+TGG | - | chr3_3:55745820-55745839 | Msa0459250:intron | 20.0% |
| !! | ATTTATGGAGTCATTTAAAA+TGG | + | chr3_3:55745846-55745865 | None:intergenic | 20.0% |
| !! | ACTTGACAAAAAAACATTTA+TGG | + | chr3_3:55745861-55745880 | None:intergenic | 20.0% |
| !!! | TAAGTCTTATGAGTATAAAA+TGG | + | chr3_3:55745974-55745993 | None:intergenic | 20.0% |
| !!! | GACATATTTTAGATACAATT+AGG | + | chr3_3:55746008-55746027 | None:intergenic | 20.0% |
| !! | AAAACATGTCTATATAAATG+AGG | - | chr3_3:55746073-55746092 | Msa0459250:intron | 20.0% |
| !! | TATGACAATAAGTAAGTATA+TGG | - | chr3_3:55746293-55746312 | Msa0459250:intron | 20.0% |
| !!! | ACAAGAGAGAAATTTTAAAA+AGG | + | chr3_3:55746484-55746503 | None:intergenic | 20.0% |
| !! | ACTTTATACTATAAATGACA+TGG | + | chr3_3:55746748-55746767 | None:intergenic | 20.0% |
| !! | AATTTGTCAATTCATTCATA+CGG | - | chr3_3:55747082-55747101 | Msa0459250:intron | 20.0% |
| ! | GGAAAACAACGTATAATAAA+AGG | - | chr3_3:55738743-55738762 | Msa0459250:CDS | 25.0% |
| ! | ATAATGCTGACATTATTGAA+AGG | - | chr3_3:55739289-55739308 | Msa0459250:intron | 25.0% |
| ! | TAATGCTGACATTATTGAAA+GGG | - | chr3_3:55739290-55739309 | Msa0459250:intron | 25.0% |
| !!! | TTTATGAACTTGATGATGAA+TGG | - | chr3_3:55739318-55739337 | Msa0459250:intron | 25.0% |
| ! | TTTAGATATTGAAGTTTGGT+TGG | - | chr3_3:55739660-55739679 | Msa0459250:intron | 25.0% |
| ! | TTAGATATTGAAGTTTGGTT+GGG | - | chr3_3:55739661-55739680 | Msa0459250:intron | 25.0% |
| !! | AAGACATTACATTGATTGAT+TGG | - | chr3_3:55739753-55739772 | Msa0459250:intron | 25.0% |
| !! | TTACATTGATTGATTGGATA+AGG | - | chr3_3:55739759-55739778 | Msa0459250:intron | 25.0% |
| !! | TACATTGATTGATTGGATAA+GGG | - | chr3_3:55739760-55739779 | Msa0459250:intron | 25.0% |
| ! | AGAAAAATATTAACACCTTC+CGG | - | chr3_3:55740385-55740404 | Msa0459250:intron | 25.0% |
| ! | ATAAATTTATTTAGGTGGAC+TGG | - | chr3_3:55740503-55740522 | Msa0459250:intron | 25.0% |
| ! | ACCAAACTGTAAAAAACAAA+AGG | - | chr3_3:55740584-55740603 | Msa0459250:intron | 25.0% |
| !!! | TCCTTTTGTTTTTTACAGTT+TGG | + | chr3_3:55740588-55740607 | None:intergenic | 25.0% |
| ! | CAATTTGATCAATTGTGTTA+CGG | - | chr3_3:55740909-55740928 | Msa0459250:intron | 25.0% |
| ! | AAACAATTCAAATGTTCAGA+TGG | + | chr3_3:55740977-55740996 | None:intergenic | 25.0% |
| ! | ATCTGAACATTTGAATTGTT+TGG | - | chr3_3:55740976-55740995 | Msa0459250:intron | 25.0% |
| ! | GTTACTAATCAATCAATGTA+TGG | + | chr3_3:55741203-55741222 | None:intergenic | 25.0% |
| ! | TTGCAACTATGATAAAGTTA+GGG | + | chr3_3:55741902-55741921 | None:intergenic | 25.0% |
| ! | ATTGCAACTATGATAAAGTT+AGG | + | chr3_3:55741903-55741922 | None:intergenic | 25.0% |
| !! | CTTTATCATAGTTGCAATTT+TGG | - | chr3_3:55741905-55741924 | Msa0459250:intron | 25.0% |
| ! | AAAAAAAAGGGTAAACTTAG+GGG | + | chr3_3:55741959-55741978 | None:intergenic | 25.0% |
| ! | GAAAAAAAAGGGTAAACTTA+GGG | + | chr3_3:55741960-55741979 | None:intergenic | 25.0% |
| ! | TGAAAAAAAAGGGTAAACTT+AGG | + | chr3_3:55741961-55741980 | None:intergenic | 25.0% |
| !!! | ACCCTTTTTTTTCAACTTTA+AGG | - | chr3_3:55741967-55741986 | Msa0459250:intron | 25.0% |
| ! | GACCTTAAAGTTGAAAAAAA+AGG | + | chr3_3:55741972-55741991 | None:intergenic | 25.0% |
| !! | CTGATAAATTCTTTCTAAAG+AGG | + | chr3_3:55742257-55742276 | None:intergenic | 25.0% |
| !! | CTCTTTAGAAAGAATTTATC+AGG | - | chr3_3:55742255-55742274 | Msa0459250:intron | 25.0% |
| ! | TTCATGGATAAGAAAATTCA+AGG | - | chr3_3:55742317-55742336 | Msa0459250:intron | 25.0% |
| ! | ATAAGAAAATTCAAGGATGA+AGG | - | chr3_3:55742324-55742343 | Msa0459250:intron | 25.0% |
| !! | TGTTACTTCTTTCTTTCATA+CGG | + | chr3_3:55742389-55742408 | None:intergenic | 25.0% |
| ! | TAGTAAAGTGGATGAAAAAA+TGG | - | chr3_3:55742428-55742447 | Msa0459250:intron | 25.0% |
| ! | AGTAAAGTGGATGAAAAAAT+GGG | - | chr3_3:55742429-55742448 | Msa0459250:intron | 25.0% |
| !!! | TTATTTTTATCGAGAGAAAC+AGG | - | chr3_3:55742510-55742529 | Msa0459250:intron | 25.0% |
| !!! | TTTTGAAAGGGAAATTTGTT+AGG | - | chr3_3:55742722-55742741 | Msa0459250:intron | 25.0% |
| ! | TTAATAAATAAGGATTCGGA+TGG | - | chr3_3:55742749-55742768 | Msa0459250:intron | 25.0% |
| ! | TAGAAAAGTGGATGAAAAAA+TGG | - | chr3_3:55742986-55743005 | Msa0459250:intron | 25.0% |
| ! | AGAAAAGTGGATGAAAAAAT+GGG | - | chr3_3:55742987-55743006 | Msa0459250:intron | 25.0% |
| !!! | TTATTTTTATCGAGAGAAAC+AGG | - | chr3_3:55742510-55742529 | Msa0459250:intron | 25.0% |
| ! | TTAATAAATAAGGATTCGGA+TGG | - | chr3_3:55742749-55742768 | Msa0459250:intron | 25.0% |
| ! | TAGAAAAGTGGATGAAAAAA+TGG | - | chr3_3:55742986-55743005 | Msa0459250:intron | 25.0% |
| ! | AGAAAAGTGGATGAAAAAAT+GGG | - | chr3_3:55742987-55743006 | Msa0459250:intron | 25.0% |
| !! | AGAGAAAAGTATATAAAGAG+AGG | - | chr3_3:55744050-55744069 | Msa0459250:intron | 25.0% |
| !! | GAGAAAAGTATATAAAGAGA+GGG | - | chr3_3:55744051-55744070 | Msa0459250:intron | 25.0% |
| !! | AGAAAAGTATATAAAGAGAG+GGG | - | chr3_3:55744052-55744071 | Msa0459250:intron | 25.0% |
| ! | AAAAAAGAACAACAGACTAA+GGG | - | chr3_3:55744111-55744130 | Msa0459250:intron | 25.0% |
| !! | GATGAATGAATATTTTCGAT+GGG | + | chr3_3:55744213-55744232 | None:intergenic | 25.0% |
| !!! | TAGCTTCAATTTTTGTTTCT+TGG | - | chr3_3:55744297-55744316 | Msa0459250:intron | 25.0% |
| !!! | CAATTTTTGTTTCTTGGTTT+TGG | - | chr3_3:55744303-55744322 | Msa0459250:intron | 25.0% |
| ! | TGTTAATATTCAGCATGATA+TGG | + | chr3_3:55744395-55744414 | None:intergenic | 25.0% |
| !! | TAATCAAATTTTAGATGGTC+AGG | + | chr3_3:55744509-55744528 | None:intergenic | 25.0% |
| !! | GTGCATAATCAAATTTTAGA+TGG | + | chr3_3:55744514-55744533 | None:intergenic | 25.0% |
| ! | ATTATGCAATGACATATGAA+AGG | - | chr3_3:55744819-55744838 | Msa0459250:intron | 25.0% |
| !!! | AGACGTTTTTTATGAAGTTA+TGG | + | chr3_3:55745268-55745287 | None:intergenic | 25.0% |
| ! | AACTTCATAAAAAACGTCTT+TGG | - | chr3_3:55745269-55745288 | Msa0459250:intron | 25.0% |
| ! | GTTATTAAGAAGAAGTTGTT+TGG | + | chr3_3:55745330-55745349 | None:intergenic | 25.0% |
| !! | TGGAAATTTTTATGAACATG+TGG | + | chr3_3:55745500-55745519 | None:intergenic | 25.0% |
| !!! | TTTTAGAGCTATTCTTAATG+AGG | - | chr3_3:55745665-55745684 | Msa0459250:intron | 25.0% |
| !! | TTGTAACGGAAAAGATATTT+CGG | - | chr3_3:55745724-55745743 | Msa0459250:intron | 25.0% |
| ! | AGTAATAAGTTCACAAAGAA+CGG | + | chr3_3:55745807-55745826 | None:intergenic | 25.0% |
| !!! | TTTGAACCCTTACTTTTTTT+TGG | - | chr3_3:55745948-55745967 | Msa0459250:intron | 25.0% |
| ! | AAATGGCCAAAAAAAAGTAA+GGG | + | chr3_3:55745957-55745976 | None:intergenic | 25.0% |
| ! | AAAATGGCCAAAAAAAAGTA+AGG | + | chr3_3:55745958-55745977 | None:intergenic | 25.0% |
| !! | AAATGAGGTAATAGTCATTT+TGG | - | chr3_3:55746088-55746107 | Msa0459250:intron | 25.0% |
| ! | AAGAGTTAATGTTAACATTC+AGG | + | chr3_3:55746225-55746244 | None:intergenic | 25.0% |
| ! | ACAATAAGTAAGTATATGGA+GGG | - | chr3_3:55746297-55746316 | Msa0459250:intron | 25.0% |
| ! | GTTAGTCAAAATAATCTGTT+AGG | + | chr3_3:55746355-55746374 | None:intergenic | 25.0% |
| !! | TAGGAGGTAATATCATATTT+TGG | + | chr3_3:55746418-55746437 | None:intergenic | 25.0% |
| ! | AGGTATACTATTTATATAGG+AGG | + | chr3_3:55746434-55746453 | None:intergenic | 25.0% |
| ! | CTCAGGTATACTATTTATAT+AGG | + | chr3_3:55746437-55746456 | None:intergenic | 25.0% |
| ! | CATACTGATGTTCATTATAA+TGG | + | chr3_3:55746671-55746690 | None:intergenic | 25.0% |
| !! | TCAATTTTACATTTCTCTGA+CGG | - | chr3_3:55746769-55746788 | Msa0459250:intron | 25.0% |
| !! | TTGTTTCTTTAACTTCTCTA+GGG | + | chr3_3:55747027-55747046 | None:intergenic | 25.0% |
| !! | TTTGTTTCTTTAACTTCTCT+AGG | + | chr3_3:55747028-55747047 | None:intergenic | 25.0% |
| ! | ATCATTCATTTCATTCTTCT+TGG | + | chr3_3:55747060-55747079 | None:intergenic | 25.0% |
| ! | ATTTGTCAATTCATTCATAC+GGG | - | chr3_3:55747083-55747102 | Msa0459250:intron | 25.0% |
| TATGAAATAAGCACACTTTG+CGG | - | chr3_3:55738790-55738809 | Msa0459250:CDS | 30.0% | |
| AGTTATACAAACCAAACCAA+TGG | - | chr3_3:55738921-55738940 | Msa0459250:CDS | 30.0% | |
| TTTGAAAGCGAAAGATAAAC+TGG | - | chr3_3:55738975-55738994 | Msa0459250:CDS | 30.0% | |
| AAGATAAACTGGCGAAATTA+AGG | - | chr3_3:55738986-55739005 | Msa0459250:CDS | 30.0% | |
| GAAATTAAGGAAGGACAATA+AGG | - | chr3_3:55738999-55739018 | Msa0459250:CDS | 30.0% | |
| !! | GTGGTTGATTTGAATTATCT+TGG | - | chr3_3:55739090-55739109 | Msa0459250:intron | 30.0% |
| ! | TTGATTTGAATTATCTTGGC+TGG | - | chr3_3:55739094-55739113 | Msa0459250:intron | 30.0% |
| GAAATGACAATGATGAATCA+TGG | - | chr3_3:55739246-55739265 | Msa0459250:intron | 30.0% | |
| TAAATTGAGATACACCTCAA+AGG | + | chr3_3:55739398-55739417 | None:intergenic | 30.0% | |
| TGATGACTTAAATCACACAT+AGG | + | chr3_3:55739504-55739523 | None:intergenic | 30.0% | |
| AACTTTCAATACATTTGCAG+TGG | - | chr3_3:55739577-55739596 | Msa0459250:intron | 30.0% | |
| ! | TTAAACAAGTTTTACCTACG+AGG | + | chr3_3:55739695-55739714 | None:intergenic | 30.0% |
| TATATGATAGGTGAACACAA+TGG | + | chr3_3:55739813-55739832 | None:intergenic | 30.0% | |
| ACAAGGGATTCATATATGAT+AGG | + | chr3_3:55739825-55739844 | None:intergenic | 30.0% | |
| CTTAAACACATACTAAGCAA+AGG | - | chr3_3:55740224-55740243 | Msa0459250:intron | 30.0% | |
| TAATTTAACATGTGAATGCG+TGG | - | chr3_3:55740283-55740302 | Msa0459250:intron | 30.0% | |
| AATTTAACATGTGAATGCGT+GGG | - | chr3_3:55740284-55740303 | Msa0459250:intron | 30.0% | |
| ! | AAGAAAACCCAATACTGATT+TGG | + | chr3_3:55740325-55740344 | None:intergenic | 30.0% |
| GAATTCGATAACAAAGCAAA+CGG | - | chr3_3:55740650-55740669 | Msa0459250:intron | 30.0% | |
| ! | TGTTACGGATTAAACCTTTA+CGG | - | chr3_3:55740924-55740943 | Msa0459250:intron | 30.0% |
| !!! | CGACATTTTTAAGTTTACTC+TGG | + | chr3_3:55741353-55741372 | None:intergenic | 30.0% |
| TATGCATGTGTTTGATTATG+CGG | - | chr3_3:55741728-55741747 | Msa0459250:intron | 30.0% | |
| ! | AATGGATCCCAAATTTCTTT+TGG | - | chr3_3:55741827-55741846 | Msa0459250:intron | 30.0% |
| ! | AAAAGACTTAAACGCACTTT+TGG | - | chr3_3:55741875-55741894 | Msa0459250:intron | 30.0% |
| TGCAACTATGATAAAGTTAG+GGG | + | chr3_3:55741901-55741920 | None:intergenic | 30.0% | |
| AAAAAAAGGGTAAACTTAGG+GGG | + | chr3_3:55741958-55741977 | None:intergenic | 30.0% | |
| TTGATAGAGTCAAGATTAAG+GGG | + | chr3_3:55741994-55742013 | None:intergenic | 30.0% | |
| ! | GTTGATAGAGTCAAGATTAA+GGG | + | chr3_3:55741995-55742014 | None:intergenic | 30.0% |
| !! | AAAAGAAAAAGGTAATGGGA+AGG | - | chr3_3:55742119-55742138 | Msa0459250:intron | 30.0% |
| !! | AAAGAAAAAGGTAATGGGAA+GGG | - | chr3_3:55742120-55742139 | Msa0459250:intron | 30.0% |
| GAAAAAGAAGAAGAAATGGT+AGG | + | chr3_3:55742300-55742319 | None:intergenic | 30.0% | |
| CCATGAAAAAGAAGAAGAAA+TGG | + | chr3_3:55742304-55742323 | None:intergenic | 30.0% | |
| !! | CCATTTCTTCTTCTTTTTCA+TGG | - | chr3_3:55742301-55742320 | Msa0459250:intron | 30.0% |
| ACTATAAATACACATGACCA+TGG | + | chr3_3:55742362-55742381 | None:intergenic | 30.0% | |
| GTAAAGTGGATGAAAAAATG+GGG | - | chr3_3:55742430-55742449 | Msa0459250:intron | 30.0% | |
| TAAAGTGGATGAAAAAATGG+GGG | - | chr3_3:55742431-55742450 | Msa0459250:intron | 30.0% | |
| TAAAAATAAACCCTAAACCG+TGG | + | chr3_3:55742499-55742518 | None:intergenic | 30.0% | |
| ! | GGATACGAATGAAATTTGTT+AGG | - | chr3_3:55742687-55742706 | Msa0459250:intron | 30.0% |
| GAAAAGTGGATGAAAAAATG+GGG | - | chr3_3:55742988-55743007 | Msa0459250:intron | 30.0% | |
| AAAAGTGGATGAAAAAATGG+GGG | - | chr3_3:55742989-55743008 | Msa0459250:intron | 30.0% | |
| AAAAAATGGGGGGAAAAATT+AGG | - | chr3_3:55743000-55743019 | Msa0459250:intron | 30.0% | |
| TAAAAATAAACCCTAAACCG+TGG | + | chr3_3:55742499-55742518 | None:intergenic | 30.0% | |
| ! | GGATACGAATGAAATTTGTT+AGG | - | chr3_3:55742687-55742706 | Msa0459250:intron | 30.0% |
| !! | TTTTGAAAGGGAAATTTGCT+AGG | - | chr3_3:55743287-55743306 | Msa0459250:intron | 30.0% |
| GATCAATGGCTAAAATTGAA+TGG | - | chr3_3:55743501-55743520 | Msa0459250:intron | 30.0% | |
| GATTCAATGGTTTAGAAAAG+TGG | - | chr3_3:55743539-55743558 | Msa0459250:intron | 30.0% | |
| GAAAAGTGGATGAAAAAATG+GGG | - | chr3_3:55742988-55743007 | Msa0459250:intron | 30.0% | |
| AAAAGTGGATGAAAAAATGG+GGG | - | chr3_3:55742989-55743008 | Msa0459250:intron | 30.0% | |
| AAAAAATGGGGGGAAAAATT+AGG | - | chr3_3:55743000-55743019 | Msa0459250:intron | 30.0% | |
| ! | CTTTTATCTTTGTCTTCTGA+GGG | + | chr3_3:55744090-55744109 | None:intergenic | 30.0% |
| CAAAAAAGAACAACAGACTA+AGG | - | chr3_3:55744110-55744129 | Msa0459250:intron | 30.0% | |
| AAGAAATCAAAGTGAAGATC+CGG | - | chr3_3:55744172-55744191 | Msa0459250:intron | 30.0% | |
| ! | CGATGAATGAATATTTTCGA+TGG | + | chr3_3:55744214-55744233 | None:intergenic | 30.0% |
| GCTCGATATTCATAAGATAA+TGG | + | chr3_3:55744722-55744741 | None:intergenic | 30.0% | |
| ! | ACATCATGTAATGGAGATTA+TGG | - | chr3_3:55744775-55744794 | Msa0459250:intron | 30.0% |
| TCAAACAACAACACATCATA+TGG | + | chr3_3:55744860-55744879 | None:intergenic | 30.0% | |
| ! | ATCTAAGGCATTTGAAGTTA+TGG | + | chr3_3:55745016-55745035 | None:intergenic | 30.0% |
| !!! | CGTTTTTTATGAAGTTATGG+TGG | + | chr3_3:55745265-55745284 | None:intergenic | 30.0% |
| TTTAGAAATCCCTGCATAAT+TGG | + | chr3_3:55745413-55745432 | None:intergenic | 30.0% | |
| AAAAGTAAGGGTTCAAATCT+CGG | + | chr3_3:55745945-55745964 | None:intergenic | 30.0% | |
| GACAATAAGTAAGTATATGG+AGG | - | chr3_3:55746296-55746315 | Msa0459250:intron | 30.0% | |
| ACATTTGGAAAAAGGAAACA+AGG | - | chr3_3:55746588-55746607 | Msa0459250:CDS | 30.0% | |
| AGTATGCATCGTTTGATATT+AGG | - | chr3_3:55746685-55746704 | Msa0459250:CDS | 30.0% | |
| !! | CTCTTGCTATATTTTCAAAC+AGG | - | chr3_3:55746792-55746811 | Msa0459250:intron | 30.0% |
| ACATACATCAATTCCACATA+AGG | + | chr3_3:55746847-55746866 | None:intergenic | 30.0% | |
| TTATGTGGAATTGATGTATG+TGG | - | chr3_3:55746846-55746865 | Msa0459250:CDS | 30.0% | |
| TGTATGTGGTATAATCTATG+AGG | - | chr3_3:55746860-55746879 | Msa0459250:CDS | 30.0% | |
| !! | ATATGGACTTTTTCTTTGGA+TGG | + | chr3_3:55746912-55746931 | None:intergenic | 30.0% |
| ATCCAAAGAAAAAGTCCATA+TGG | - | chr3_3:55746911-55746930 | Msa0459250:CDS | 30.0% | |
| ! | GATTTTCTTCGTTCATATTC+AGG | + | chr3_3:55746960-55746979 | None:intergenic | 30.0% |
| ATATGAACGAAGAAAATCGA+TGG | - | chr3_3:55746962-55746981 | Msa0459250:CDS | 30.0% | |
| AGCAGTATCATTCACTATGA+AGG | + | chr3_3:55738722-55738741 | None:intergenic | 35.0% | |
| TCATAGTGAATGATACTGCT+AGG | - | chr3_3:55738722-55738741 | Msa0459250:CDS | 35.0% | |
| !!! | AAAGGGTGCTCTCAAATTTT+AGG | - | chr3_3:55738887-55738906 | Msa0459250:CDS | 35.0% |
| !!! | AAGGGTGCTCTCAAATTTTA+GGG | - | chr3_3:55738888-55738907 | Msa0459250:CDS | 35.0% |
| !! | GGTTTGGTTTGTATAACTTC+AGG | + | chr3_3:55738919-55738938 | None:intergenic | 35.0% |
| !! | AAAGTCTCTTGATTTGCCAT+TGG | + | chr3_3:55738940-55738959 | None:intergenic | 35.0% |
| TAAACTGGCGAAATTAAGGA+AGG | - | chr3_3:55738990-55739009 | Msa0459250:CDS | 35.0% | |
| TTTGATCAATGTCTCTATGC+AGG | - | chr3_3:55739042-55739061 | Msa0459250:CDS | 35.0% | |
| ! | GTTGATAGACCACAAATTGA+AGG | - | chr3_3:55739116-55739135 | Msa0459250:intron | 35.0% |
| AAGTCAAGACCAACTACAAT+TGG | - | chr3_3:55739191-55739210 | Msa0459250:intron | 35.0% | |
| TATTTATAGGCAACCCAACA+TGG | + | chr3_3:55739272-55739291 | None:intergenic | 35.0% | |
| !! | AACTTGATGATGAATGGTGA+TGG | - | chr3_3:55739324-55739343 | Msa0459250:intron | 35.0% |
| !! | ACTTGATGATGAATGGTGAT+GGG | - | chr3_3:55739325-55739344 | Msa0459250:intron | 35.0% |
| !!! | GAAGACATAGTGGTTTTGAT+GGG | - | chr3_3:55739468-55739487 | Msa0459250:intron | 35.0% |
| !!! | AAGACATAGTGGTTTTGATG+GGG | - | chr3_3:55739469-55739488 | Msa0459250:intron | 35.0% |
| GTGATTTAAGTCATCATGTG+TGG | - | chr3_3:55739508-55739527 | Msa0459250:intron | 35.0% | |
| ACACACTCAATCAAACTCAA+CGG | - | chr3_3:55739784-55739803 | Msa0459250:intron | 35.0% | |
| CTTAGTATGTGTTTAAGCGA+AGG | + | chr3_3:55740221-55740240 | None:intergenic | 35.0% | |
| TACTCAAGCCAAATCAGTAT+TGG | - | chr3_3:55740314-55740333 | Msa0459250:intron | 35.0% | |
| ACTCAAGCCAAATCAGTATT+GGG | - | chr3_3:55740315-55740334 | Msa0459250:intron | 35.0% | |
| TAGATAGTCATTCACCAAGT+TGG | + | chr3_3:55740359-55740378 | None:intergenic | 35.0% | |
| AAAATATTAACACCTTCCGG+AGG | - | chr3_3:55740388-55740407 | Msa0459250:intron | 35.0% | |
| ! | TTTTTAGATTTACCTCCGGA+AGG | + | chr3_3:55740403-55740422 | None:intergenic | 35.0% |
| CGGCTATATTTACTTAGCTA+AGG | + | chr3_3:55740538-55740557 | None:intergenic | 35.0% | |
| !!! | TTTTCTTCAAGTTGCTGTGT+CGG | + | chr3_3:55740558-55740577 | None:intergenic | 35.0% |
| GTCTGATTTATGCAGATTGA+AGG | - | chr3_3:55740628-55740647 | Msa0459250:intron | 35.0% | |
| !! | AATTTTGACACGAACAACTC+TGG | - | chr3_3:55740718-55740737 | Msa0459250:intron | 35.0% |
| !! | CTCTAAAAGCATTGACTATG+TGG | + | chr3_3:55740789-55740808 | None:intergenic | 35.0% |
| ! | CACATAGTCAATGCTTTTAG+AGG | - | chr3_3:55740787-55740806 | Msa0459250:intron | 35.0% |
| AATCTTTCATGAGTCCGTAA+AGG | + | chr3_3:55740941-55740960 | None:intergenic | 35.0% | |
| ACAATTAATAACTCCGACGA+TGG | + | chr3_3:55741036-55741055 | None:intergenic | 35.0% | |
| !! | TGAAAAGTGTTCTGATACAG+TGG | + | chr3_3:55741138-55741157 | None:intergenic | 35.0% |
| TGTATGGTAACTGATCTGTT+CGG | + | chr3_3:55741187-55741206 | None:intergenic | 35.0% | |
| TTGCTAACAAATCTGTATGC+TGG | + | chr3_3:55741298-55741317 | None:intergenic | 35.0% | |
| AATATGATAAAGGGCGACAA+CGG | - | chr3_3:55741654-55741673 | Msa0459250:intron | 35.0% | |
| ! | TTAAGTCGATTCTCCAACAT+GGG | + | chr3_3:55741686-55741705 | None:intergenic | 35.0% |
| ! | TTTAAGTCGATTCTCCAACA+TGG | + | chr3_3:55741687-55741706 | None:intergenic | 35.0% |
| AAACTTAGGGGGTTAAAAAG+TGG | + | chr3_3:55741947-55741966 | None:intergenic | 35.0% | |
| ! | CGTTGATAGAGTCAAGATTA+AGG | + | chr3_3:55741996-55742015 | None:intergenic | 35.0% |
| !! | AAGAAAAAGGTAATGGGAAG+GGG | - | chr3_3:55742121-55742140 | Msa0459250:intron | 35.0% |
| CCACTTTACTAAGAACACAA+AGG | + | chr3_3:55742419-55742438 | None:intergenic | 35.0% | |
| CCTTTGTGTTCTTAGTAAAG+TGG | - | chr3_3:55742416-55742435 | Msa0459250:intron | 35.0% | |
| AAAGTGGATGAAAAAATGGG+GGG | - | chr3_3:55742432-55742451 | Msa0459250:intron | 35.0% | |
| AAAAAATGGGGGGGAAAATT+AGG | - | chr3_3:55742442-55742461 | Msa0459250:intron | 35.0% | |
| !! | TAGGTTTAGGGTTAGCTTTA+CGG | - | chr3_3:55742461-55742480 | Msa0459250:intron | 35.0% |
| ! | TACGGATTAAGCATTTACCA+CGG | - | chr3_3:55742479-55742498 | Msa0459250:intron | 35.0% |
| TTAAGCATTTACCACGGTTT+AGG | - | chr3_3:55742485-55742504 | Msa0459250:intron | 35.0% | |
| TAAGCATTTACCACGGTTTA+GGG | - | chr3_3:55742486-55742505 | Msa0459250:intron | 35.0% | |
| TTATCGAGAGAAACAGGTTT+AGG | - | chr3_3:55742516-55742535 | Msa0459250:intron | 35.0% | |
| TATCGAGAGAAACAGGTTTA+GGG | - | chr3_3:55742517-55742536 | Msa0459250:intron | 35.0% | |
| TGCTTCATAAAAAAAAGGCG+AGG | - | chr3_3:55742564-55742583 | Msa0459250:intron | 35.0% | |
| !!! | GTGCGATGCATTTTTTTAGA+TGG | - | chr3_3:55742602-55742621 | Msa0459250:intron | 35.0% |
| AAAGTGGATGAAAAAATGGG+GGG | - | chr3_3:55742432-55742451 | Msa0459250:intron | 35.0% | |
| ! | TACGGATTAAGCATTTACCA+CGG | - | chr3_3:55742479-55742498 | Msa0459250:intron | 35.0% |
| TTAAGCATTTACCACGGTTT+AGG | - | chr3_3:55742485-55742504 | Msa0459250:intron | 35.0% | |
| TAAGCATTTACCACGGTTTA+GGG | - | chr3_3:55742486-55742505 | Msa0459250:intron | 35.0% | |
| TTATCGAGAGAAACAGGTTT+AGG | - | chr3_3:55742516-55742535 | Msa0459250:intron | 35.0% | |
| TATCGAGAGAAACAGGTTTA+GGG | - | chr3_3:55742517-55742536 | Msa0459250:intron | 35.0% | |
| GCTTCATAAAAAAAAAGGCG+AGG | - | chr3_3:55743123-55743142 | Msa0459250:intron | 35.0% | |
| !!! | GTGCGATGCATTTTTTTAGA+TGG | - | chr3_3:55742602-55742621 | Msa0459250:intron | 35.0% |
| AAAGTGGATGAAAAAATGGG+GGG | - | chr3_3:55742432-55742451 | Msa0459250:intron | 35.0% | |
| !! | TAGGTTTAGGGTTAGCTTTA+CGG | - | chr3_3:55742461-55742480 | Msa0459250:intron | 35.0% |
| !!! | CTTTTAGAGTTTGACTGCAT+AGG | + | chr3_3:55744017-55744036 | None:intergenic | 35.0% |
| ! | GCTTTTATCTTTGTCTTCTG+AGG | + | chr3_3:55744091-55744110 | None:intergenic | 35.0% |
| TTGAAGCTACAACAAGTCTA+GGG | + | chr3_3:55744286-55744305 | None:intergenic | 35.0% | |
| ATTGAAGCTACAACAAGTCT+AGG | + | chr3_3:55744287-55744306 | None:intergenic | 35.0% | |
| TTCAGCATGATATGGAATTG+TGG | + | chr3_3:55744387-55744406 | None:intergenic | 35.0% | |
| AACTGCAGAAACAATGGAAA+CGG | - | chr3_3:55744555-55744574 | Msa0459250:intron | 35.0% | |
| !!! | GAGTCACACAATTTTAGAGT+TGG | + | chr3_3:55744656-55744675 | None:intergenic | 35.0% |
| TAAATTCAGAAGCAAACGTG+AGG | - | chr3_3:55744743-55744762 | Msa0459250:intron | 35.0% | |
| ATCGGTTGAACATCATGTAA+TGG | - | chr3_3:55744766-55744785 | Msa0459250:intron | 35.0% | |
| GTGTGACTCATTGTTATGAT+GGG | - | chr3_3:55744987-55745006 | Msa0459250:intron | 35.0% | |
| TGTGACTCATTGTTATGATG+GGG | - | chr3_3:55744988-55745007 | Msa0459250:intron | 35.0% | |
| AGAAGACATTGGATCATCTA+AGG | + | chr3_3:55745031-55745050 | None:intergenic | 35.0% | |
| TTAGATGATCCAATGTCTTC+TGG | - | chr3_3:55745030-55745049 | Msa0459250:intron | 35.0% | |
| ! | TCGTGTTTGTCTACTTGTTT+TGG | - | chr3_3:55745129-55745148 | Msa0459250:intron | 35.0% |
| !!! | CTTGTTTTGGATGTAACCAA+CGG | - | chr3_3:55745142-55745161 | Msa0459250:intron | 35.0% |
| ! | TGCACTCATTGTAAAAGCAT+TGG | + | chr3_3:55745186-55745205 | None:intergenic | 35.0% |
| GTTGTTTGGACATTATGCTA+GGG | + | chr3_3:55745316-55745335 | None:intergenic | 35.0% | |
| AGTTGTTTGGACATTATGCT+AGG | + | chr3_3:55745317-55745336 | None:intergenic | 35.0% | |
| ! | AACTTTGTTTGAGATCGCAA+GGG | + | chr3_3:55745382-55745401 | None:intergenic | 35.0% |
| ! | GATGATAACGAATAAGGAGA+TGG | + | chr3_3:55745464-55745483 | None:intergenic | 35.0% |
| CATTATGAAGGTAGTAGAGT+TGG | + | chr3_3:55745520-55745539 | None:intergenic | 35.0% | |
| CAACTCTACTACCTTCATAA+TGG | - | chr3_3:55745518-55745537 | Msa0459250:intron | 35.0% | |
| AACAAAGTGAGCCATTATGA+AGG | + | chr3_3:55745532-55745551 | None:intergenic | 35.0% | |
| CACTTTGTTACACGTGTTAT+CGG | - | chr3_3:55745543-55745562 | Msa0459250:intron | 35.0% | |
| CAAGATCCATACTCTTGTAA+CGG | - | chr3_3:55745710-55745729 | Msa0459250:intron | 35.0% | |
| ! | TCTTTTCCGTTACAAGAGTA+TGG | + | chr3_3:55745719-55745738 | None:intergenic | 35.0% |
| ! | CAAGTTTTTGTCACGTAATC+TGG | - | chr3_3:55745876-55745895 | Msa0459250:intron | 35.0% |
| TGACTAACGAAATGTGCAAT+CGG | + | chr3_3:55746176-55746195 | None:intergenic | 35.0% | |
| GTATACCTGAGTAAGAAGAA+AGG | - | chr3_3:55746446-55746465 | Msa0459250:intron | 35.0% | |
| GAAAGGCAACATTTGGAAAA+AGG | - | chr3_3:55746580-55746599 | Msa0459250:CDS | 35.0% | |
| AATGAAATCACCACCTTATG+TGG | - | chr3_3:55746831-55746850 | Msa0459250:intron | 35.0% | |
| TACATCAATTCCACATAAGG+TGG | + | chr3_3:55746844-55746863 | None:intergenic | 35.0% | |
| !! | CACCATATGGACTTTTTCTT+TGG | + | chr3_3:55746916-55746935 | None:intergenic | 35.0% |
| AGAAAAAGTCCATATGGTGT+TGG | - | chr3_3:55746917-55746936 | Msa0459250:CDS | 35.0% | |
| ATTCATTCATACGGGTGATT+TGG | - | chr3_3:55747091-55747110 | Msa0459250:intron | 35.0% | |
| GCTTATTGTTGAGAACCTTA+AGG | - | chr3_3:55747154-55747173 | Msa0459250:CDS | 35.0% | |
| TTCTTTGTTCGACTTCCTTA+AGG | + | chr3_3:55747172-55747191 | None:intergenic | 35.0% | |
| AAGTCGAACAAAGAATCGAA+TGG | - | chr3_3:55747177-55747196 | Msa0459250:CDS | 35.0% | |
| CAAGCATGCGCTGTAATTTA+TGG | - | chr3_3:55738817-55738836 | Msa0459250:CDS | 40.0% | |
| ATCACCATGTGAAGTCGAAA+GGG | - | chr3_3:55738870-55738889 | Msa0459250:CDS | 40.0% | |
| !! | CTCTTGATTTGCCATTGGTT+TGG | + | chr3_3:55738935-55738954 | None:intergenic | 40.0% |
| AAGAGACTTTCATGAGCCAA+AGG | - | chr3_3:55738950-55738969 | Msa0459250:CDS | 40.0% | |
| AGAGACTTTCATGAGCCAAA+GGG | - | chr3_3:55738951-55738970 | Msa0459250:CDS | 40.0% | |
| CTTTCGCTTTCAAAACCCTT+TGG | + | chr3_3:55738969-55738988 | None:intergenic | 40.0% | |
| TGTGAACAACGATATGTCAG+TGG | - | chr3_3:55739071-55739090 | Msa0459250:CDS | 40.0% | |
| ATGATGAATCATGGCCATGT+TGG | - | chr3_3:55739255-55739274 | Msa0459250:intron | 40.0% | |
| TGATGAATCATGGCCATGTT+GGG | - | chr3_3:55739256-55739275 | Msa0459250:intron | 40.0% | |
| !! | CTTGATGATGAATGGTGATG+GGG | - | chr3_3:55739326-55739345 | Msa0459250:intron | 40.0% |
| ! | CAATACCATACCATTTGGTG+AGG | - | chr3_3:55739350-55739369 | Msa0459250:intron | 40.0% |
| CAAAGGATATGCAAAACTCC+AGG | + | chr3_3:55739381-55739400 | None:intergenic | 40.0% | |
| ! | GGAGTTTTGCATATCCTTTG+AGG | - | chr3_3:55739381-55739400 | Msa0459250:intron | 40.0% |
| !!! | GGAAGACATAGTGGTTTTGA+TGG | - | chr3_3:55739467-55739486 | Msa0459250:intron | 40.0% |
| CAAAGGCAAGCATACTAACT+TGG | - | chr3_3:55740241-55740260 | Msa0459250:intron | 40.0% | |
| CTTCATCAAGCATACCAACT+TGG | - | chr3_3:55740342-55740361 | Msa0459250:intron | 40.0% | |
| TCGTGTCAAAATTGAGCACA+AGG | + | chr3_3:55740711-55740730 | None:intergenic | 40.0% | |
| ! | AACAACTCTGGTAGGTTTTG+TGG | - | chr3_3:55740730-55740749 | Msa0459250:intron | 40.0% |
| ATCTGTTGTTGAGCTTAGTG+TGG | + | chr3_3:55741013-55741032 | None:intergenic | 40.0% | |
| !! | ACAACGGATTATACCCATGT+TGG | - | chr3_3:55741670-55741689 | Msa0459250:intron | 40.0% |
| AAGTGGATGAAAAAATGGGG+GGG | - | chr3_3:55742433-55742452 | Msa0459250:intron | 40.0% | |
| ATTCGGATGGCCAAAACTAT+AGG | - | chr3_3:55742762-55742781 | Msa0459250:intron | 40.0% | |
| GATCCAATGGCTTAGAAAAG+TGG | - | chr3_3:55742974-55742993 | Msa0459250:intron | 40.0% | |
| !! | CATCCACTTTTCTAAGCCAT+TGG | + | chr3_3:55742980-55742999 | None:intergenic | 40.0% |
| !! | TAGGTTCAGGGTTAGCTTTA+CGG | - | chr3_3:55743019-55743038 | Msa0459250:intron | 40.0% |
| ATTCGGATGGCCAAAACTAT+AGG | - | chr3_3:55742762-55742781 | Msa0459250:intron | 40.0% | |
| CCATTGAATCTTGCGCATTT+AGG | + | chr3_3:55743529-55743548 | None:intergenic | 40.0% | |
| CCTAAATGCGCAAGATTCAA+TGG | - | chr3_3:55743526-55743545 | Msa0459250:intron | 40.0% | |
| TGGGGGGAAAAATTAGGTTT+AGG | - | chr3_3:55743571-55743590 | Msa0459250:intron | 40.0% | |
| GGGGGGAAAAATTAGGTTTA+GGG | - | chr3_3:55743572-55743591 | Msa0459250:intron | 40.0% | |
| !! | AGGTTTAGGGTTAGCTTTAC+GGG | - | chr3_3:55742462-55742481 | Msa0459250:intron | 40.0% |
| GAGAAAAGACAAGCATCAAG+AGG | - | chr3_3:55743946-55743965 | Msa0459250:intron | 40.0% | |
| ! | TCTTGGGGTGTCAATCTTAT+TGG | + | chr3_3:55743985-55744004 | None:intergenic | 40.0% |
| CATAGGATAGAGGTTTCTTG+GGG | + | chr3_3:55744000-55744019 | None:intergenic | 40.0% | |
| GCATAGGATAGAGGTTTCTT+GGG | + | chr3_3:55744001-55744020 | None:intergenic | 40.0% | |
| TGCATAGGATAGAGGTTTCT+TGG | + | chr3_3:55744002-55744021 | None:intergenic | 40.0% | |
| AGTTTGACTGCATAGGATAG+AGG | + | chr3_3:55744010-55744029 | None:intergenic | 40.0% | |
| !! | TCTTTGTCTTCTGAGGGTTT+TGG | + | chr3_3:55744084-55744103 | None:intergenic | 40.0% |
| TCTTTCTTTCGTGATCGATG+TGG | + | chr3_3:55744156-55744175 | None:intergenic | 40.0% | |
| AAATCAAAGTGAAGATCCGG+CGG | - | chr3_3:55744175-55744194 | Msa0459250:intron | 40.0% | |
| CATTCATCGAGCATTTGAAG+AGG | - | chr3_3:55744225-55744244 | Msa0459250:intron | 40.0% | |
| !! | ACACCTTAAGAGTGTTCGAT+AGG | - | chr3_3:55744252-55744271 | Msa0459250:intron | 40.0% |
| !! | CTTAAGAGTGTTCGATAGGT+CGG | - | chr3_3:55744256-55744275 | Msa0459250:intron | 40.0% |
| !! | TTAAGAGTGTTCGATAGGTC+GGG | - | chr3_3:55744257-55744276 | Msa0459250:intron | 40.0% |
| AGCTAAACAGCCATTCACAT+CGG | + | chr3_3:55744335-55744354 | None:intergenic | 40.0% | |
| GGAATTGTGGCAGAGAATTA+TGG | + | chr3_3:55744374-55744393 | None:intergenic | 40.0% | |
| CTTGAATCGTTACTGTCAAC+CGG | - | chr3_3:55744475-55744494 | Msa0459250:intron | 40.0% | |
| GACAACAACTGCAGAAACAA+TGG | - | chr3_3:55744549-55744568 | Msa0459250:intron | 40.0% | |
| ACTGCAGAAACAATGGAAAC+GGG | - | chr3_3:55744556-55744575 | Msa0459250:intron | 40.0% | |
| ! | TTATGGCCTCGCTATTTCAT+CGG | - | chr3_3:55744792-55744811 | Msa0459250:intron | 40.0% |
| ATGTTTCCGATGAAATAGCG+AGG | + | chr3_3:55744801-55744820 | None:intergenic | 40.0% | |
| CACATCATATGGACAAGTCT+GGG | + | chr3_3:55744849-55744868 | None:intergenic | 40.0% | |
| ACACATCATATGGACAAGTC+TGG | + | chr3_3:55744850-55744869 | None:intergenic | 40.0% | |
| CGTGTGACTCATTGTTATGA+TGG | - | chr3_3:55744986-55745005 | Msa0459250:intron | 40.0% | |
| TGGGATAATCCAGAAGACAT+TGG | + | chr3_3:55745042-55745061 | None:intergenic | 40.0% | |
| AATGTCTTCTGGATTATCCC+AGG | - | chr3_3:55745041-55745060 | Msa0459250:intron | 40.0% | |
| ATGTCTTCTGGATTATCCCA+GGG | - | chr3_3:55745042-55745061 | Msa0459250:intron | 40.0% | |
| ACAATGTAACGTCTTTCCGT+TGG | + | chr3_3:55745161-55745180 | None:intergenic | 40.0% | |
| GATTGAATATGAGGGGTTGT+CGG | + | chr3_3:55745214-55745233 | None:intergenic | 40.0% | |
| CGATGGAGATTGAATATGAG+GGG | + | chr3_3:55745221-55745240 | None:intergenic | 40.0% | |
| CCGATGGAGATTGAATATGA+GGG | + | chr3_3:55745222-55745241 | None:intergenic | 40.0% | |
| CCCTCATATTCAATCTCCAT+CGG | - | chr3_3:55745219-55745238 | Msa0459250:intron | 40.0% | |
| CCTCATATTCAATCTCCATC+GGG | - | chr3_3:55745220-55745239 | Msa0459250:intron | 40.0% | |
| TGGACATTATGCTAGGGTAT+TGG | + | chr3_3:55745310-55745329 | None:intergenic | 40.0% | |
| ! | GAACTTTGTTTGAGATCGCA+AGG | + | chr3_3:55745383-55745402 | None:intergenic | 40.0% |
| TTCTCTCCATCCAATTATGC+AGG | - | chr3_3:55745400-55745419 | Msa0459250:intron | 40.0% | |
| TCTCTCCATCCAATTATGCA+GGG | - | chr3_3:55745401-55745420 | Msa0459250:intron | 40.0% | |
| GAAATCCCTGCATAATTGGA+TGG | + | chr3_3:55745409-55745428 | None:intergenic | 40.0% | |
| TTATGAACATGTGGTTGCCT+TGG | + | chr3_3:55745491-55745510 | None:intergenic | 40.0% | |
| TTTGTTACACGTGTTATCGG+AGG | - | chr3_3:55745546-55745565 | Msa0459250:intron | 40.0% | |
| !! | GTAATAGTCATTTTGGTCGC+TGG | - | chr3_3:55746095-55746114 | Msa0459250:intron | 40.0% |
| ! | GACTACTCGCTATCTTTTCT+AGG | - | chr3_3:55746391-55746410 | Msa0459250:intron | 40.0% |
| TCATGCCTTTCTTCTTACTC+AGG | + | chr3_3:55746454-55746473 | None:intergenic | 40.0% | |
| ! | CAGTTTTCCAATCACTACCA+TGG | - | chr3_3:55746512-55746531 | Msa0459250:intron | 40.0% |
| !! | TTTCGAATTTCTAGCAGCCA+TGG | + | chr3_3:55746532-55746551 | None:intergenic | 40.0% |
| AACTGATGACTCGAAGAGAA+AGG | - | chr3_3:55746563-55746582 | Msa0459250:CDS | 40.0% | |
| TCGAAGAGAAAGGCAACATT+TGG | - | chr3_3:55746573-55746592 | Msa0459250:CDS | 40.0% | |
| GGAAAACAACACTCAAGCAA+TGG | - | chr3_3:55746881-55746900 | Msa0459250:CDS | 40.0% | |
| TGAACTTGTCCAACACCATA+TGG | + | chr3_3:55746929-55746948 | None:intergenic | 40.0% | |
| TGAACGAAGAAAATCGATGG+TGG | - | chr3_3:55746965-55746984 | Msa0459250:CDS | 40.0% | |
| !! | AAAATCGATGGTGGATCATG+AGG | - | chr3_3:55746974-55746993 | Msa0459250:CDS | 40.0% |
| !! | AAATCGATGGTGGATCATGA+GGG | - | chr3_3:55746975-55746994 | Msa0459250:CDS | 40.0% |
| ! | ATTCATACGGGTGATTTGGA+TGG | - | chr3_3:55747095-55747114 | Msa0459250:CDS | 40.0% |
| ! | GGTGATTTGGATGGAAATGT+TGG | - | chr3_3:55747104-55747123 | Msa0459250:CDS | 40.0% |
| !! | ACCTCAGGTTGAGGTTCATA+GGG | + | chr3_3:55738844-55738863 | None:intergenic | 45.0% |
| !! | AACCTCAGGTTGAGGTTCAT+AGG | + | chr3_3:55738845-55738864 | None:intergenic | 45.0% |
| ATGAACCTCAACCTGAGGTT+TGG | - | chr3_3:55738845-55738864 | Msa0459250:CDS | 45.0% | |
| CTTTCGACTTCACATGGTGA+TGG | + | chr3_3:55738871-55738890 | None:intergenic | 45.0% | |
| CATCACCATGTGAAGTCGAA+AGG | - | chr3_3:55738869-55738888 | Msa0459250:CDS | 45.0% | |
| GACCACAAATTGAAGGACCT+TGG | - | chr3_3:55739123-55739142 | Msa0459250:intron | 45.0% | |
| TGCCAAGGTCCTTCAATTTG+TGG | + | chr3_3:55739128-55739147 | None:intergenic | 45.0% | |
| AATTGAAGGACCTTGGCAGA+AGG | - | chr3_3:55739130-55739149 | Msa0459250:intron | 45.0% | |
| ATGATTCCAACCTTCTGCCA+AGG | + | chr3_3:55739143-55739162 | None:intergenic | 45.0% | |
| TTGGCAGAAGGTTGGAATCA+TGG | - | chr3_3:55739142-55739161 | Msa0459250:intron | 45.0% | |
| TGGCAGAAGGTTGGAATCAT+GGG | - | chr3_3:55739143-55739162 | Msa0459250:intron | 45.0% | |
| GCAGTGGAACCAATTGTAGT+TGG | + | chr3_3:55739203-55739222 | None:intergenic | 45.0% | |
| ! | CATTGTCATTTCCTCCTTCG+TGG | + | chr3_3:55739238-55739257 | None:intergenic | 45.0% |
| GGGGACAATACCATACCATT+TGG | - | chr3_3:55739345-55739364 | Msa0459250:intron | 45.0% | |
| ATCGACCTCACCAAATGGTA+TGG | + | chr3_3:55739358-55739377 | None:intergenic | 45.0% | |
| TTGACACGAACAACTCTGGT+AGG | - | chr3_3:55740722-55740741 | Msa0459250:intron | 45.0% | |
| !! | GCTGTTGATGATGATGAAGC+TGG | + | chr3_3:55740767-55740786 | None:intergenic | 45.0% |
| !!! | TTAGCACCTGTTTTGGTGGT+TGG | - | chr3_3:55740815-55740834 | Msa0459250:intron | 45.0% |
| CTCAACAACAGATCCATCGT+CGG | - | chr3_3:55741020-55741039 | Msa0459250:intron | 45.0% | |
| AGTCTTTACGGTGGAATGGA+AGG | + | chr3_3:55741110-55741129 | None:intergenic | 45.0% | |
| GATGAGTCTTTACGGTGGAA+TGG | + | chr3_3:55741114-55741133 | None:intergenic | 45.0% | |
| ACAGTGGCGATGAGTCTTTA+CGG | + | chr3_3:55741122-55741141 | None:intergenic | 45.0% | |
| ACTTAAGTGATGAGCCACGT+GGG | + | chr3_3:55742019-55742038 | None:intergenic | 45.0% | |
| GGCTCATCACTTAAGTGAGT+TGG | - | chr3_3:55742023-55742042 | Msa0459250:intron | 45.0% | |
| ! | TAGGTGAGAAAGCATGAGTG+TGG | + | chr3_3:55742281-55742300 | None:intergenic | 45.0% |
| TGGGGGGGAAAATTAGGTTT+AGG | - | chr3_3:55742448-55742467 | Msa0459250:intron | 45.0% | |
| GGGGGGGAAAATTAGGTTTA+GGG | - | chr3_3:55742449-55742468 | Msa0459250:intron | 45.0% | |
| CCATTGGATCTTGCGCATTT+AGG | + | chr3_3:55742964-55742983 | None:intergenic | 45.0% | |
| CCTAAATGCGCAAGATCCAA+TGG | - | chr3_3:55742961-55742980 | Msa0459250:intron | 45.0% | |
| TGGGGGGAAAAATTAGGTTC+AGG | - | chr3_3:55743006-55743025 | Msa0459250:intron | 45.0% | |
| GGGGGGAAAAATTAGGTTCA+GGG | - | chr3_3:55743007-55743026 | Msa0459250:intron | 45.0% | |
| CGACCTATCGAACACTCTTA+AGG | + | chr3_3:55744258-55744277 | None:intergenic | 45.0% | |
| TTGGTGAAGACCGATGTGAA+TGG | - | chr3_3:55744322-55744341 | Msa0459250:intron | 45.0% | |
| CAACAACAAGGTCACGCAAA+GGG | + | chr3_3:55744440-55744459 | None:intergenic | 45.0% | |
| ACAACAACAAGGTCACGCAA+AGG | + | chr3_3:55744441-55744460 | None:intergenic | 45.0% | |
| AATCGTTACTGTCAACCGGA+TGG | - | chr3_3:55744479-55744498 | Msa0459250:intron | 45.0% | |
| TGTACAGAACCAGAGAGATG+AGG | + | chr3_3:55744632-55744651 | None:intergenic | 45.0% | |
| CTCTCAATACCCCTCACTAT+CGG | - | chr3_3:55744673-55744692 | Msa0459250:intron | 45.0% | |
| TCAGAAGCAAACGTGAGGAT+CGG | - | chr3_3:55744748-55744767 | Msa0459250:intron | 45.0% | |
| !! | CATTCAGAAAGAGAGTGTCG+AGG | + | chr3_3:55744941-55744960 | None:intergenic | 45.0% |
| CTCGACACTCTCTTTCTGAA+TGG | - | chr3_3:55744939-55744958 | Msa0459250:intron | 45.0% | |
| GACACTCTCTTTCTGAATGG+CGG | - | chr3_3:55744942-55744961 | Msa0459250:intron | 45.0% | |
| CAATGAGTCACACGCATAGT+AGG | + | chr3_3:55744980-55744999 | None:intergenic | 45.0% | |
| AGAAACAGTACACGCAATGG+TGG | + | chr3_3:55745071-55745090 | None:intergenic | 45.0% | |
| AGTTGACAAAGGGAGGAAGT+CGG | + | chr3_3:55745103-55745122 | None:intergenic | 45.0% | |
| ACGAGCATCCAGTTGACAAA+GGG | + | chr3_3:55745113-55745132 | None:intergenic | 45.0% | |
| CCCGATGGAGATTGAATATG+AGG | + | chr3_3:55745223-55745242 | None:intergenic | 45.0% | |
| ! | TTTGAGATCGCAAGGGTTGT+CGG | + | chr3_3:55745375-55745394 | None:intergenic | 45.0% |
| ! | GGTGCGGATGATAACGAATA+AGG | + | chr3_3:55745470-55745489 | None:intergenic | 45.0% |
| ATTCGTTATCATCCGCACCA+AGG | - | chr3_3:55745471-55745490 | Msa0459250:intron | 45.0% | |
| !!! | CTTCTCTAGGGCTTTTGCTA+TGG | + | chr3_3:55747015-55747034 | None:intergenic | 45.0% |
| !!! | TTAATTTTTTTTTTTTGAAA+GGG | - | chr3_3:55742710-55742729 | Msa0459250:intron | 5.0% |
| !!! | TAAATTTTTTTTTTTTTGAA+AGG | - | chr3_3:55743274-55743293 | Msa0459250:intron | 5.0% |
| !!! | AAATTTTTTTTTTTTTGAAA+GGG | - | chr3_3:55743275-55743294 | Msa0459250:intron | 5.0% |
| !! | CCTCAGGTTGAGGTTCATAG+GGG | + | chr3_3:55738843-55738862 | None:intergenic | 50.0% |
| AGCACCCTTTCGACTTCACA+TGG | + | chr3_3:55738877-55738896 | None:intergenic | 50.0% | |
| ATTTCCTCCTTCGTGGATGG+TGG | + | chr3_3:55739231-55739250 | None:intergenic | 50.0% | |
| GTCATTTCCTCCTTCGTGGA+TGG | + | chr3_3:55739234-55739253 | None:intergenic | 50.0% | |
| GGGTGTATGGGAAGACATAG+TGG | - | chr3_3:55739458-55739477 | Msa0459250:intron | 50.0% | |
| ACATTTGCAGTGGCAAGTCC+CGG | - | chr3_3:55739587-55739606 | Msa0459250:intron | 50.0% | |
| ! | GGACCTCTTAGCACCTGTTT+TGG | - | chr3_3:55740808-55740827 | Msa0459250:intron | 50.0% |
| CCACCAAAACAGGTGCTAAG+AGG | + | chr3_3:55740814-55740833 | None:intergenic | 50.0% | |
| !! | CCTCTTAGCACCTGTTTTGG+TGG | - | chr3_3:55740811-55740830 | Msa0459250:intron | 50.0% |
| GACACACCAACCACCAAAAC+AGG | + | chr3_3:55740824-55740843 | None:intergenic | 50.0% | |
| ATGTCTGCAGGATGTACCAG+AGG | + | chr3_3:55740879-55740898 | None:intergenic | 50.0% | |
| CTGGTACATCCTGCAGACAT+TGG | - | chr3_3:55740879-55740898 | Msa0459250:intron | 50.0% | |
| GTACATCCTGCAGACATTGG+CGG | - | chr3_3:55740882-55740901 | Msa0459250:intron | 50.0% | |
| ! | TCTGTTCGGTGAGGAATCGA+TGG | + | chr3_3:55741173-55741192 | None:intergenic | 50.0% |
| ! | GGTAACTGATCTGTTCGGTG+AGG | + | chr3_3:55741182-55741201 | None:intergenic | 50.0% |
| CACTTAAGTGATGAGCCACG+TGG | + | chr3_3:55742020-55742039 | None:intergenic | 50.0% | |
| GAAGGTGACATTCACAGCCA+TGG | - | chr3_3:55742342-55742361 | Msa0459250:intron | 50.0% | |
| !! | CGTGACCTTGTTGTTGTCCT+CGG | - | chr3_3:55744444-55744463 | Msa0459250:intron | 50.0% |
| !! | GTGACCTTGTTGTTGTCCTC+GGG | - | chr3_3:55744445-55744464 | Msa0459250:intron | 50.0% |
| GATACCCGAGGACAACAACA+AGG | + | chr3_3:55744452-55744471 | None:intergenic | 50.0% | |
| CGATTCAAGCATGATACCCG+AGG | + | chr3_3:55744464-55744483 | None:intergenic | 50.0% | |
| ! | AGATGGTCAGGTTGTCCATC+CGG | + | chr3_3:55744497-55744516 | None:intergenic | 50.0% |
| TGTTGTCCATGAGCAGCAAG+CGG | + | chr3_3:55744536-55744555 | None:intergenic | 50.0% | |
| GAAACGGGAGCCTATGATTG+CGG | - | chr3_3:55744571-55744590 | Msa0459250:intron | 50.0% | |
| CAGAAGTCCTCCGCAATCAT+AGG | + | chr3_3:55744584-55744603 | None:intergenic | 50.0% | |
| CTATGATTGCGGAGGACTTC+TGG | - | chr3_3:55744582-55744601 | Msa0459250:intron | 50.0% | |
| TGAGGAAGACGAGGTCATGT+CGG | + | chr3_3:55744614-55744633 | None:intergenic | 50.0% | |
| ! | AATGGCTAGTCCTGAAGACC+CGG | + | chr3_3:55744704-55744723 | None:intergenic | 50.0% |
| GCTTGAGCAGCAAGTAGAGA+AGG | + | chr3_3:55744905-55744924 | None:intergenic | 50.0% | |
| CTTTCTGAATGGCGGCAATC+TGG | - | chr3_3:55744950-55744969 | Msa0459250:intron | 50.0% | |
| CGCAGAAACAGTACACGCAA+TGG | + | chr3_3:55745074-55745093 | None:intergenic | 50.0% | |
| GACTTCCTCCCTTTGTCAAC+TGG | - | chr3_3:55745102-55745121 | Msa0459250:intron | 50.0% | |
| AGCATCCAGTTGACAAAGGG+AGG | + | chr3_3:55745110-55745129 | None:intergenic | 50.0% | |
| CACGAGCATCCAGTTGACAA+AGG | + | chr3_3:55745114-55745133 | None:intergenic | 50.0% | |
| ! | CGAAGGTTTTGCATTCCCGA+TGG | + | chr3_3:55745238-55745257 | None:intergenic | 50.0% |
| TTGAGATCGCAAGGGTTGTC+GGG | + | chr3_3:55745374-55745393 | None:intergenic | 50.0% | |
| AACATGTGGTTGCCTTGGTG+CGG | + | chr3_3:55745486-55745505 | None:intergenic | 50.0% | |
| ! | CTAGCAGCCATGGTAGTGAT+TGG | + | chr3_3:55746522-55746541 | None:intergenic | 50.0% |
| TGGATCATGAGGGCTTCTTG+AGG | - | chr3_3:55746985-55747004 | Msa0459250:CDS | 50.0% | |
| CCCCTATGAACCTCAACCTG+AGG | - | chr3_3:55738840-55738859 | Msa0459250:CDS | 55.0% | |
| ! | GATGGCCAAACCTCAGGTTG+AGG | + | chr3_3:55738853-55738872 | None:intergenic | 55.0% |
| !! | CATGGTGATGGCCAAACCTC+AGG | + | chr3_3:55738859-55738878 | None:intergenic | 55.0% |
| GAAGGACCTTGGCAGAAGGT+TGG | - | chr3_3:55739134-55739153 | Msa0459250:intron | 55.0% | |
| CCAGGATCGACCTCACCAAA+TGG | + | chr3_3:55739363-55739382 | None:intergenic | 55.0% | |
| ! | CCATTTGGTGAGGTCGATCC+TGG | - | chr3_3:55739360-55739379 | Msa0459250:intron | 55.0% |
| GTTGGGTTACGAGACCTCGT+AGG | - | chr3_3:55739678-55739697 | Msa0459250:intron | 55.0% | |
| ! | GGGTCGGCGTTCTAGTTAAC+AGG | + | chr3_3:55739943-55739962 | None:intergenic | 55.0% |
| !! | TAGGTTTTGTGGCCGACGTC+TGG | - | chr3_3:55740741-55740760 | Msa0459250:intron | 55.0% |
| TGATGAAGCTGGCCAGACGT+CGG | + | chr3_3:55740756-55740775 | None:intergenic | 55.0% | |
| TGTTTGCCGCCAATGTCTGC+AGG | + | chr3_3:55740891-55740910 | None:intergenic | 55.0% | |
| ! | GTGGAATGGAAGGTGCATGC+AGG | + | chr3_3:55741100-55741119 | None:intergenic | 55.0% |
| GTGGCGATGAGTCTTTACGG+TGG | + | chr3_3:55741119-55741138 | None:intergenic | 55.0% | |
| GGAATCGATGGAGGCAACAG+TGG | + | chr3_3:55741161-55741180 | None:intergenic | 55.0% | |
| ! | GTTCGGTGAGGAATCGATGG+AGG | + | chr3_3:55741170-55741189 | None:intergenic | 55.0% |
| TGACTCTATCAACGCCCACG+TGG | - | chr3_3:55742002-55742021 | Msa0459250:intron | 55.0% | |
| TGGGAATGCTACGTTACCGC+CGG | + | chr3_3:55744194-55744213 | None:intergenic | 55.0% | |
| ! | TATGCACCGCTTGCTGCTCA+TGG | - | chr3_3:55744527-55744546 | Msa0459250:intron | 55.0% |
| GAGGAAGACGAGGTCATGTC+GGG | + | chr3_3:55744613-55744632 | None:intergenic | 55.0% | |
| CCAGAGAGATGAGGAAGACG+AGG | + | chr3_3:55744623-55744642 | None:intergenic | 55.0% | |
| CCTCGTCTTCCTCATCTCTC+TGG | - | chr3_3:55744620-55744639 | Msa0459250:intron | 55.0% | |
| ! | GCAGCAAGTAGAGAAGGTGC+AGG | + | chr3_3:55744899-55744918 | None:intergenic | 55.0% |
| GAAGTTATGGTGGCACGCGA+AGG | + | chr3_3:55745255-55745274 | None:intergenic | 55.0% | |
| !! | TCCTTCGTGGATGGTGGTGG+CGG | + | chr3_3:55739225-55739244 | None:intergenic | 60.0% |
| ! | TCCTCCTTCGTGGATGGTGG+TGG | + | chr3_3:55739228-55739247 | None:intergenic | 60.0% |
| GTGAGACCCGTGCATTGCAC+GGG | + | chr3_3:55739963-55739982 | None:intergenic | 60.0% | |
| CGTGAGACCCGTGCATTGCA+CGG | + | chr3_3:55739964-55739983 | None:intergenic | 60.0% | |
| CGTGCAATGCACGGGTCTCA+CGG | - | chr3_3:55739962-55739981 | Msa0459250:intron | 60.0% | |
| GTGCAATGCACGGGTCTCAC+GGG | - | chr3_3:55739963-55739982 | Msa0459250:intron | 60.0% | |
| CTGCATGAGTCCTCAGCCTC+TGG | - | chr3_3:55740860-55740879 | Msa0459250:intron | 60.0% | |
| GCAGGATGTACCAGAGGCTG+AGG | + | chr3_3:55740873-55740892 | None:intergenic | 60.0% | |
| ACGGGAGCCTATGATTGCGG+AGG | - | chr3_3:55744574-55744593 | Msa0459250:intron | 60.0% | |
| CCGGTGGATCCGATAGTGAG+GGG | + | chr3_3:55744685-55744704 | None:intergenic | 60.0% | |
| CCCCTCACTATCGGATCCAC+CGG | - | chr3_3:55744682-55744701 | Msa0459250:intron | 60.0% | |
| CCCGGTGGATCCGATAGTGA+GGG | + | chr3_3:55744686-55744705 | None:intergenic | 60.0% | |
| CCCTCACTATCGGATCCACC+GGG | - | chr3_3:55744683-55744702 | Msa0459250:intron | 60.0% | |
| ACCCGGTGGATCCGATAGTG+AGG | + | chr3_3:55744687-55744706 | None:intergenic | 60.0% | |
| ATCGGATCCACCGGGTCTTC+AGG | - | chr3_3:55744691-55744710 | Msa0459250:intron | 60.0% | |
| ! | CACGCAATGGTGGAAGCCCT+GGG | + | chr3_3:55745061-55745080 | None:intergenic | 60.0% |
| ! | ACACGCAATGGTGGAAGCCC+TGG | + | chr3_3:55745062-55745081 | None:intergenic | 60.0% |
| GCCACCACCATCCACGAAGG+AGG | - | chr3_3:55739224-55739243 | Msa0459250:intron | 65.0% | |
| ACGCCGACCCGTGCAATGCA+CGG | - | chr3_3:55739953-55739972 | Msa0459250:intron | 65.0% | |
| GACCCGTGCATTGCACGGGT+CGG | + | chr3_3:55739959-55739978 | None:intergenic | 65.0% | |
| AATGCACGGGTCTCACGGGC+AGG | - | chr3_3:55739967-55739986 | Msa0459250:intron | 65.0% | |
| ! | GGCTAGTCCTGAAGACCCGG+TGG | + | chr3_3:55744701-55744720 | None:intergenic | 65.0% |
| !! | GTGGATGGTGGTGGCGGCAG+TGG | + | chr3_3:55739219-55739238 | None:intergenic | 70.0% |
| GCCGCCACCACCATCCACGA+AGG | - | chr3_3:55739221-55739240 | Msa0459250:intron | 70.0% | |
| CGCCGACCCGTGCAATGCAC+GGG | - | chr3_3:55739954-55739973 | Msa0459250:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 55738700 | 55747223 | 55738700 | ID=Msa0459250;Name=Msa0459250 |
| chr3_3 | mRNA | 55738700 | 55747223 | 55738700 | ID=Msa0459250-mRNA-1;Parent=Msa0459250;Name=Msa0459250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0|4|0|326 |
| chr3_3 | exon | 55747095 | 55747223 | 55747095 | ID=Msa0459250-mRNA-1:exon:11071;Parent=Msa0459250-mRNA-1 |
| chr3_3 | exon | 55746838 | 55747061 | 55746838 | ID=Msa0459250-mRNA-1:exon:11070;Parent=Msa0459250-mRNA-1 |
| chr3_3 | exon | 55746540 | 55746771 | 55746540 | ID=Msa0459250-mRNA-1:exon:11069;Parent=Msa0459250-mRNA-1 |
| chr3_3 | exon | 55738700 | 55739095 | 55738700 | ID=Msa0459250-mRNA-1:exon:11068;Parent=Msa0459250-mRNA-1 |
| chr3_3 | CDS | 55747095 | 55747223 | 55747095 | ID=Msa0459250-mRNA-1:cds;Parent=Msa0459250-mRNA-1 |
| chr3_3 | CDS | 55746838 | 55747061 | 55746838 | ID=Msa0459250-mRNA-1:cds;Parent=Msa0459250-mRNA-1 |
| chr3_3 | CDS | 55746540 | 55746771 | 55746540 | ID=Msa0459250-mRNA-1:cds;Parent=Msa0459250-mRNA-1 |
| chr3_3 | CDS | 55738700 | 55739095 | 55738700 | ID=Msa0459250-mRNA-1:cds;Parent=Msa0459250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
