AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0470730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470730 MtrunA17_Chr8g0351491 72.242 281 28 4 1 234 1 278 1.29e-140 395
Msa0470730 MtrunA17_Chr8g0353621 70.588 272 32 3 7 233 3 271 1.80e-133 376
Msa0470730 MtrunA17_Chr3g0125381 76.959 217 5 2 63 234 1 217 3.73e-115 328
Msa0470730 MtrunA17_Chr3g0140631 52.574 272 81 3 6 232 29 297 4.68e-96 283
Msa0470730 MtrunA17_Chr6g0478601 30.072 276 129 4 10 221 107 382 2.58e-34 128
Msa0470730 MtrunA17_Chr4g0018201 29.455 275 131 4 10 221 755 1029 2.21e-33 127
Msa0470730 MtrunA17_Chr5g0428981 29.455 275 131 4 10 221 759 1033 2.37e-33 127
Msa0470730 MtrunA17_Chr2g0304111 27.692 260 138 5 14 225 23 280 2.09e-32 122
Msa0470730 MtrunA17_Chr4g0063881 29.771 262 136 4 11 226 8 267 2.34e-32 122
Msa0470730 MtrunA17_Chr5g0441011 27.969 261 138 5 14 226 13 271 1.18e-31 120
Msa0470730 MtrunA17_Chr4g0001331 30.686 277 137 7 1 224 1 275 1.66e-31 120
Msa0470730 MtrunA17_Chr1g0205421 32.692 260 130 6 11 225 9 268 2.83e-31 119
Msa0470730 MtrunA17_Chr4g0013131 29.961 257 135 6 14 225 12 268 7.38e-31 118
Msa0470730 MtrunA17_Chr8g0346071 24.324 259 152 4 11 225 14 272 1.20e-30 117
Msa0470730 MtrunA17_Chr7g0244521 29.572 257 136 6 14 225 12 268 1.55e-30 117
Msa0470730 MtrunA17_Chr5g0432491 29.845 258 135 5 14 225 23 280 3.32e-30 116
Msa0470730 MtrunA17_Chr2g0284011 32.432 222 116 5 14 201 12 233 3.65e-30 116
Msa0470730 MtrunA17_Chr2g0284031 29.740 269 144 6 2 225 19 287 6.70e-30 116
Msa0470730 MtrunA17_Chr5g0441691 30.189 265 132 6 14 227 68 330 8.03e-30 116
Msa0470730 MtrunA17_Chr2g0302431 30.045 223 121 3 14 201 20 242 1.05e-29 115
Msa0470730 MtrunA17_Chr3g0114511 32.883 222 117 4 11 200 29 250 1.11e-29 115
Msa0470730 MtrunA17_Chr3g0107011 29.259 270 144 6 1 224 1 269 1.29e-29 115
Msa0470730 MtrunA17_Chr4g0074811 30.943 265 130 6 14 227 91 353 1.73e-29 115
Msa0470730 MtrunA17_Chr7g0274941 31.034 261 127 7 14 223 16 274 2.90e-29 111
Msa0470730 MtrunA17_Chr7g0245031 29.461 241 135 3 7 215 141 378 3.10e-29 114
Msa0470730 MtrunA17_Chr8g0379091 29.091 275 149 7 1 229 13 287 6.77e-29 113
Msa0470730 MtrunA17_Chr1g0173541 28.679 265 136 6 11 224 49 311 7.55e-29 113
Msa0470730 MtrunA17_Chr3g0125371 86.667 60 1 1 1 53 1 60 1.12e-28 102
Msa0470730 MtrunA17_Chr8g0346081 24.696 247 151 3 11 224 14 258 1.41e-28 111
Msa0470730 MtrunA17_Chr8g0345801 29.565 230 124 4 11 204 12 239 1.42e-28 108
Msa0470730 MtrunA17_Chr5g0428031 27.803 223 128 2 11 200 6 228 2.10e-28 111
Msa0470730 MtrunA17_Chr1g0200601 29.658 263 132 6 16 227 32 292 6.13e-28 110
Msa0470730 MtrunA17_Chr3g0098951 29.278 263 133 6 14 225 84 344 9.61e-28 110
Msa0470730 MtrunA17_Chr1g0157131 29.630 270 137 6 12 230 72 339 1.73e-27 109
Msa0470730 MtrunA17_Chr0c02g0489761 29.811 265 133 6 14 227 78 340 1.79e-27 109
Msa0470730 MtrunA17_Chr5g0444171 28.358 268 139 6 14 230 92 357 3.58e-27 108
Msa0470730 MtrunA17_Chr7g0257751 29.119 261 132 6 14 223 58 316 4.35e-27 108
Msa0470730 MtrunA17_Chr4g0059951 28.467 274 142 7 11 232 69 340 8.95e-27 107
Msa0470730 MtrunA17_Chr8g0385341 28.788 264 135 6 14 226 30 291 1.35e-26 107
Msa0470730 MtrunA17_Chr1g0166101 30.672 238 128 5 11 213 21 256 1.58e-26 105
Msa0470730 MtrunA17_Chr4g0059751 27.132 258 146 4 13 231 88 342 1.79e-26 105
Msa0470730 MtrunA17_Chr2g0333821 30.627 271 139 7 1 224 1 269 2.25e-26 105
Msa0470730 MtrunA17_Chr1g0170281 28.626 262 134 6 14 224 118 377 3.28e-26 106
Msa0470730 MtrunA17_Chr1g0150321 29.104 268 134 7 14 233 13 272 7.48e-26 104
Msa0470730 MtrunA17_Chr5g0432471 29.864 221 121 4 14 200 12 232 1.81e-25 103
Msa0470730 MtrunA17_Chr4g0074111 31.455 213 108 6 14 192 18 226 3.45e-25 102
Msa0470730 MtrunA17_Chr4g0033371 28.244 262 135 6 14 224 72 331 5.26e-25 102
Msa0470730 MtrunA17_Chr6g0453681 26.923 260 141 5 11 224 16 272 5.49e-25 102
Msa0470730 MtrunA17_Chr3g0107051 28.251 223 124 4 14 201 21 242 8.10e-25 101
Msa0470730 MtrunA17_Chr3g0131181 28.788 264 135 6 14 226 29 290 1.16e-24 101
Msa0470730 MtrunA17_Chr6g0468751 27.692 260 135 6 11 222 16 270 1.75e-24 100
Msa0470730 MtrunA17_Chr7g0261491 27.465 284 132 5 5 214 111 394 1.87e-24 101
Msa0470730 MtrunA17_Chr1g0183651 27.817 284 131 5 5 214 111 394 1.89e-24 101
Msa0470730 MtrunA17_Chr5g0448721 29.057 265 135 6 14 227 96 358 2.55e-24 100
Msa0470730 MtrunA17_Chr1g0188031 30.000 240 129 7 11 213 17 254 2.70e-24 100
Msa0470730 MtrunA17_Chr4g0069301 27.758 281 148 6 3 230 10 288 2.98e-24 100
Msa0470730 MtrunA17_Chr1g0176421 26.568 271 145 7 6 224 152 420 5.18e-24 100
Msa0470730 MtrunA17_Chr8g0387671 29.104 268 137 6 14 230 66 331 1.07e-23 99.0
Msa0470730 MtrunA17_Chr1g0203881 25.180 278 154 7 4 229 30 305 2.24e-23 97.8
Msa0470730 MtrunA17_Chr4g0008561 28.629 248 138 6 11 221 16 261 3.06e-23 97.8
Msa0470730 MtrunA17_Chr1g0153321 26.367 311 138 5 5 224 99 409 3.11e-23 97.4
Msa0470730 MtrunA17_Chr8g0385281 28.519 270 132 7 11 226 2 264 3.35e-23 95.9
Msa0470730 MtrunA17_Chr4g0055451 28.302 265 133 6 14 226 5 264 7.60e-23 94.7
Msa0470730 MtrunA17_Chr5g0397101 29.811 265 133 6 14 227 67 329 9.57e-23 96.3
Msa0470730 MtrunA17_Chr4g0030361 28.102 274 137 5 14 228 309 581 9.78e-23 96.3
Msa0470730 MtrunA17_Chr1g0170551 26.538 260 146 6 10 226 3 260 1.17e-22 96.3
Msa0470730 MtrunA17_Chr3g0131061 27.985 268 136 6 11 226 1 263 1.69e-22 94.0
Msa0470730 MtrunA17_Chr5g0399911 27.372 274 137 6 14 226 6 278 2.02e-22 94.0
Msa0470730 MtrunA17_Chr1g0197721 26.582 237 132 2 6 200 43 279 2.28e-22 95.1
Msa0470730 MtrunA17_Chr3g0132671 25.862 290 136 7 11 224 16 302 2.65e-22 94.7
Msa0470730 MtrunA17_Chr3g0123791 30.651 261 124 7 14 222 5 260 3.10e-22 93.2
Msa0470730 MtrunA17_Chr2g0277501 27.170 265 136 6 14 226 4 263 3.45e-22 93.2
Msa0470730 MtrunA17_Chr4g0045261 27.068 266 137 8 14 224 137 400 8.30e-22 93.6
Msa0470730 MtrunA17_Chr7g0267771 26.718 262 139 6 14 224 88 347 8.32e-22 93.2
Msa0470730 MtrunA17_Chr1g0176751 27.306 271 143 7 5 223 114 382 1.08e-21 93.2
Msa0470730 MtrunA17_Chr8g0381821 27.547 265 135 6 14 226 4 263 1.78e-21 91.3
Msa0470730 MtrunA17_Chr5g0426521 27.925 265 134 7 14 226 4 263 1.83e-21 90.9
Msa0470730 MtrunA17_Chr7g0267751 26.336 262 140 6 14 224 135 394 1.94e-21 92.4
Msa0470730 MtrunA17_Chr3g0091281 30.493 223 122 4 11 200 9 231 3.20e-21 88.6
Msa0470730 MtrunA17_Chr1g0162301 27.547 265 135 6 14 226 24 283 4.52e-21 90.5
Msa0470730 MtrunA17_Chr3g0091311 33.333 180 86 3 11 157 9 187 5.58e-21 88.6
Msa0470730 MtrunA17_Chr1g0167351 25.987 304 134 6 12 224 108 411 5.74e-21 90.9
Msa0470730 MtrunA17_Chr3g0080101 45.055 91 50 0 131 221 642 732 8.28e-21 90.9
Msa0470730 MtrunA17_Chr3g0129721 28.846 208 111 4 20 192 31 236 8.92e-21 88.6
Msa0470730 MtrunA17_Chr2g0286501 28.509 228 115 5 11 200 46 263 1.00e-20 90.5
Msa0470730 MtrunA17_Chr7g0242561 26.923 260 137 6 16 224 58 315 1.17e-20 90.1
Msa0470730 MtrunA17_Chr1g0187581 25.161 310 142 6 5 224 108 417 1.29e-20 90.1
Msa0470730 MtrunA17_Chr7g0256001 26.493 268 140 8 11 223 138 403 2.87e-20 89.0
Msa0470730 MtrunA17_Chr1g0190131 25.969 258 141 6 14 223 9 264 3.50e-20 86.7
Msa0470730 MtrunA17_Chr1g0202831 28.244 262 133 9 17 227 414 671 1.22e-19 87.4
Msa0470730 MtrunA17_Chr3g0127571 25.368 272 142 9 14 228 138 405 1.39e-19 87.0
Msa0470730 MtrunA17_Chr1g0179101 41.304 92 54 0 130 221 694 785 2.59e-19 86.3
Msa0470730 MtrunA17_Chr7g0266031 42.391 92 53 0 130 221 716 807 2.80e-19 86.3
Msa0470730 MtrunA17_Chr8g0374701 26.667 270 136 9 14 224 125 391 3.16e-19 85.9
Msa0470730 MtrunA17_Chr3g0091421 29.148 223 125 4 11 200 9 231 3.87e-19 83.2
Msa0470730 MtrunA17_Chr5g0405421 25.368 272 148 7 14 232 99 368 1.03e-18 84.3
Msa0470730 MtrunA17_Chr8g0386981 26.641 259 135 9 17 224 411 665 1.59e-18 84.3
Msa0470730 MtrunA17_Chr3g0132591 25.769 260 136 7 12 223 110 360 1.72e-18 83.6
Msa0470730 MtrunA17_Chr7g0276111 24.254 268 148 8 14 227 144 410 2.64e-18 83.2
Msa0470730 MtrunA17_Chr8g0369091 26.296 270 136 6 14 221 599 867 1.10e-17 81.6
Msa0470730 MtrunA17_Chr2g0321101 44.565 92 51 0 130 221 314 405 1.26e-17 81.3
Msa0470730 MtrunA17_Chr2g0290691 41.304 92 54 0 130 221 434 525 2.42e-17 80.5
Msa0470730 MtrunA17_Chr2g0327561 25.902 305 132 8 10 224 624 924 3.62e-17 80.1
Msa0470730 MtrunA17_Chr7g0227331 39.362 94 57 0 128 221 460 553 6.85e-17 79.3
Msa0470730 MtrunA17_Chr3g0130151 28.897 263 130 10 17 227 247 504 8.26e-17 79.0
Msa0470730 MtrunA17_Chr8g0356291 39.252 107 58 1 122 221 336 442 9.88e-17 78.6
Msa0470730 MtrunA17_Chr6g0449401 40.217 92 55 0 130 221 523 614 1.18e-16 78.6
Msa0470730 MtrunA17_Chr2g0309421 37.963 108 59 1 122 221 383 490 1.52e-16 78.2
Msa0470730 MtrunA17_Chr7g0250631 36.134 119 69 2 109 221 561 678 6.87e-16 76.3
Msa0470730 MtrunA17_Chr4g0063311 39.394 99 53 1 130 221 323 421 1.02e-15 75.9
Msa0470730 MtrunA17_Chr8g0335351 38.043 92 57 0 130 221 594 685 1.86e-15 75.1
Msa0470730 MtrunA17_Chr8g0381091 39.583 96 53 2 130 221 293 387 3.05e-14 71.2
Msa0470730 MtrunA17_Chr3g0135951 38.835 103 46 2 139 224 300 402 6.16e-14 70.5
Msa0470730 MtrunA17_Chr2g0329011 24.074 270 126 9 7 199 10 277 1.08e-13 69.3
Msa0470730 MtrunA17_Chr6g0486661 36.957 138 63 6 87 214 867 990 2.60e-13 68.9
Msa0470730 MtrunA17_Chr7g0234641 35.870 92 52 2 132 221 233 319 8.17e-13 67.0
Msa0470730 MtrunA17_Chr8g0338741 47.458 59 31 0 135 193 245 303 9.90e-13 67.0
Msa0470730 MtrunA17_Chr1g0167311 37.864 103 46 3 139 224 314 415 1.54e-12 66.2
Msa0470730 MtrunA17_Chr2g0299781 37.500 104 48 3 139 225 319 422 2.00e-12 66.2
Msa0470730 MtrunA17_Chr3g0091411 33.775 151 72 5 11 157 9 135 2.15e-12 64.7
Msa0470730 MtrunA17_Chr4g0032761 32.381 105 63 1 89 193 211 307 2.94e-12 65.5
Msa0470730 MtrunA17_Chr5g0444181 32.692 104 69 1 14 116 91 194 1.03e-11 62.8
Msa0470730 MtrunA17_Chr5g0444191 32.727 110 61 3 133 230 62 170 1.21e-11 62.0
Msa0470730 MtrunA17_Chr2g0285711 34.737 95 59 2 130 221 295 389 2.05e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470730 AT2G45490.1 63.636 275 52 3 4 233 12 283 5.32e-124 353
Msa0470730 AT2G45490.2 67.490 243 44 2 4 214 12 251 7.50e-118 337
Msa0470730 AT2G25880.2 60.166 241 79 3 5 232 17 253 6.04e-102 296
Msa0470730 AT4G32830.1 53.846 273 77 4 5 232 23 291 9.47e-97 285
Msa0470730 AT2G25880.1 52.536 276 82 4 2 232 14 285 5.20e-95 280
Msa0470730 AT2G25880.4 52.536 276 82 4 2 232 27 298 8.77e-95 280
Msa0470730 AT2G25880.3 52.536 276 82 4 2 232 75 346 7.09e-94 279
Msa0470730 AT1G30270.1 29.278 263 136 5 11 225 28 288 4.80e-34 127
Msa0470730 AT5G62310.1 29.412 289 140 4 10 234 750 1038 4.92e-34 129
Msa0470730 AT1G30270.2 29.278 263 136 5 11 225 28 288 5.81e-34 127
Msa0470730 AT5G25110.1 31.298 262 131 6 14 228 43 302 8.27e-33 124
Msa0470730 AT2G26980.2 28.352 261 150 4 1 226 1 259 3.79e-32 118
Msa0470730 AT5G10930.1 31.034 261 130 7 14 226 12 270 9.04e-32 120
Msa0470730 AT3G08730.1 30.453 243 133 4 11 221 131 369 1.03e-31 121
Msa0470730 AT3G08730.2 30.453 243 133 4 11 221 131 369 1.03e-31 121
Msa0470730 AT1G61950.1 29.740 269 135 6 14 230 98 364 1.67e-31 121
Msa0470730 AT2G41860.2 30.000 270 136 6 14 232 54 321 1.84e-31 121
Msa0470730 AT3G08720.1 30.864 243 132 4 11 221 137 375 2.39e-31 120
Msa0470730 AT3G08720.3 30.864 243 132 4 11 221 137 375 2.39e-31 120
Msa0470730 AT3G08720.4 30.864 243 132 4 11 221 137 375 2.39e-31 120
Msa0470730 AT3G08720.2 30.864 243 132 4 11 221 137 375 2.39e-31 120
Msa0470730 AT1G48490.4 30.000 270 131 5 10 221 825 1094 3.75e-31 121
Msa0470730 AT1G48490.3 30.000 270 131 5 10 221 824 1093 3.93e-31 121
Msa0470730 AT1G48490.2 30.000 270 131 5 10 221 824 1093 3.93e-31 121
Msa0470730 AT1G48490.1 30.000 270 131 5 10 221 824 1093 3.93e-31 121
Msa0470730 AT4G04720.2 29.771 262 131 6 14 224 80 339 6.99e-31 119
Msa0470730 AT4G04720.1 29.771 262 131 6 14 224 80 339 6.99e-31 119
Msa0470730 AT2G26980.1 28.185 259 149 4 1 224 1 257 9.87e-31 117
Msa0470730 AT2G41860.1 29.630 270 137 6 14 232 54 321 9.94e-31 119
Msa0470730 AT4G18700.1 30.651 261 136 6 14 229 26 286 1.19e-30 118
Msa0470730 AT2G26980.5 28.185 259 149 4 1 224 1 257 1.28e-30 117
Msa0470730 AT3G17850.1 28.261 276 134 4 10 221 878 1153 2.55e-30 119
Msa0470730 AT2G26980.4 28.185 259 149 4 1 224 11 267 2.64e-30 117
Msa0470730 AT2G26980.3 28.185 259 149 4 1 224 1 257 2.67e-30 117
Msa0470730 AT5G45810.1 28.467 274 149 5 2 229 16 288 3.17e-30 117
Msa0470730 AT1G45160.1 27.957 279 141 3 10 228 666 944 4.45e-30 118
Msa0470730 AT5G35410.2 27.966 236 135 3 11 213 8 241 4.60e-30 115
Msa0470730 AT2G31500.1 30.916 262 128 6 14 224 66 325 4.80e-30 117
Msa0470730 AT1G45160.2 27.957 279 141 3 10 228 666 944 6.02e-30 117
Msa0470730 AT5G35410.1 27.966 236 135 3 11 213 8 241 1.20e-29 115
Msa0470730 AT5G21326.1 29.832 238 130 4 11 213 10 245 2.10e-29 114
Msa0470730 AT4G24400.2 29.148 223 125 2 11 200 6 228 2.46e-29 114
Msa0470730 AT5G01810.3 32.127 221 116 5 14 200 12 232 2.53e-29 113
Msa0470730 AT4G24400.1 29.148 223 125 2 11 200 6 228 3.70e-29 114
Msa0470730 AT2G34180.1 30.075 266 139 6 11 230 54 318 4.37e-29 114
Msa0470730 AT5G01810.1 32.127 221 116 5 14 200 12 232 5.00e-29 113
Msa0470730 AT5G01810.2 32.127 221 116 5 14 200 12 232 5.00e-29 113
Msa0470730 AT5G12180.1 29.434 265 134 6 14 227 73 335 6.81e-29 114
Msa0470730 AT1G01140.1 26.616 263 143 5 11 225 16 276 8.83e-29 112
Msa0470730 AT1G01140.3 26.616 263 143 5 11 225 16 276 9.08e-29 112
Msa0470730 AT5G21222.1 27.007 274 149 6 1 226 1 271 9.93e-29 114
Msa0470730 AT5G21222.2 27.007 274 149 6 1 226 1 271 9.93e-29 114
Msa0470730 AT5G21222.4 27.007 274 149 6 1 226 1 271 9.93e-29 114
Msa0470730 AT5G21222.3 27.007 274 149 6 1 226 1 271 9.93e-29 114
Msa0470730 AT5G19360.1 29.044 272 140 6 12 232 66 335 1.35e-28 113
Msa0470730 AT3G23000.1 29.412 238 131 5 11 213 22 257 1.74e-28 111
Msa0470730 AT4G14580.1 29.707 239 130 5 11 213 18 254 2.47e-28 111
Msa0470730 AT4G21940.3 29.008 262 133 6 14 224 102 361 8.41e-28 110
Msa0470730 AT4G21940.2 29.008 262 133 6 14 224 102 361 9.21e-28 110
Msa0470730 AT5G45820.1 31.222 221 118 4 14 200 12 232 9.77e-28 109
Msa0470730 AT4G21940.1 29.008 262 133 6 14 224 102 361 1.01e-27 110
Msa0470730 AT3G57530.2 29.008 262 133 6 14 224 63 322 1.29e-27 109
Msa0470730 AT2G25090.1 28.114 281 144 6 2 226 3 281 1.89e-27 109
Msa0470730 AT5G19450.2 29.008 262 133 6 14 224 57 316 2.10e-27 109
Msa0470730 AT5G19450.1 29.008 262 133 6 14 224 57 316 2.10e-27 109
Msa0470730 AT1G35670.1 30.116 259 128 6 16 223 28 284 2.56e-27 109
Msa0470730 AT3G57530.1 29.008 262 133 6 14 224 63 322 2.72e-27 109
Msa0470730 AT1G29230.1 28.467 274 149 6 3 230 63 335 3.13e-27 109
Msa0470730 AT1G74740.1 28.462 260 133 6 16 224 61 318 3.32e-27 109
Msa0470730 AT1G01140.2 25.475 263 148 4 11 225 16 278 3.84e-27 108
Msa0470730 AT3G01090.3 28.244 262 135 6 11 224 16 272 4.28e-27 108
Msa0470730 AT3G01090.1 28.244 262 135 6 11 224 16 272 4.28e-27 108
Msa0470730 AT4G09570.1 30.888 259 126 6 16 223 27 283 4.62e-27 108
Msa0470730 AT5G39440.1 27.451 255 137 4 13 222 18 269 5.61e-27 108
Msa0470730 AT3G01090.2 28.462 260 133 6 13 224 41 295 5.71e-27 108
Msa0470730 AT1G50700.3 27.985 268 140 6 14 230 73 338 8.33e-27 107
Msa0470730 AT1G50700.1 27.985 268 140 6 14 230 73 338 1.04e-26 107
Msa0470730 AT1G48260.1 28.862 246 138 4 11 221 8 251 1.35e-26 106
Msa0470730 AT1G50700.2 27.985 268 140 6 14 230 73 338 1.40e-26 107
Msa0470730 AT3G20410.2 28.897 263 134 6 14 225 91 351 1.86e-26 107
Msa0470730 AT3G20410.1 28.897 263 134 6 14 225 91 351 1.86e-26 107
Msa0470730 AT3G29160.3 27.869 244 136 5 13 221 19 257 2.20e-26 105
Msa0470730 AT2G38910.1 27.863 262 136 6 14 224 134 393 3.15e-26 106
Msa0470730 AT5G12480.1 27.969 261 135 6 14 223 59 317 4.78e-26 105
Msa0470730 AT5G04510.3 28.400 250 135 3 6 213 36 283 4.83e-26 103
Msa0470730 AT5G58380.1 31.222 221 118 5 14 200 12 232 5.84e-26 105
Msa0470730 AT3G17510.1 27.234 235 136 3 2 201 8 242 6.19e-26 105
Msa0470730 AT2G30360.1 27.481 262 143 6 8 222 15 276 7.02e-26 104
Msa0470730 AT3G29160.1 27.869 244 136 5 13 221 19 257 7.49e-26 105
Msa0470730 AT3G29160.2 27.869 244 136 5 13 221 19 257 7.49e-26 105
Msa0470730 AT5G57630.1 27.928 222 127 4 11 200 9 229 8.07e-26 104
Msa0470730 AT5G57630.2 27.928 222 127 4 11 200 9 229 8.24e-26 104
Msa0470730 AT5G04510.2 27.612 268 150 3 6 231 36 301 8.67e-26 104
Msa0470730 AT5G04510.1 27.612 268 150 3 6 231 36 301 1.78e-25 103
Msa0470730 AT2G35890.2 28.195 266 138 6 14 228 132 395 2.07e-25 103
Msa0470730 AT2G35890.1 28.195 266 138 6 14 228 132 395 2.07e-25 103
Msa0470730 AT1G03920.2 27.184 309 136 6 5 224 15 323 2.26e-25 103
Msa0470730 AT4G30960.1 30.153 262 138 7 14 230 24 285 2.47e-25 103
Msa0470730 AT4G38230.4 30.000 270 135 7 10 227 19 286 2.62e-25 103
Msa0470730 AT4G38230.3 30.000 270 135 7 10 227 19 286 2.62e-25 103
Msa0470730 AT4G38230.2 30.000 270 135 7 10 227 49 316 2.87e-25 103
Msa0470730 AT4G35310.2 30.189 265 132 6 14 227 97 359 3.66e-25 103
Msa0470730 AT4G35310.1 30.189 265 132 6 14 227 97 359 3.66e-25 103
Msa0470730 AT2G17290.1 29.811 265 133 6 14 227 85 347 4.72e-25 103
Msa0470730 AT2G17290.2 29.811 265 133 6 14 227 85 347 4.72e-25 103
Msa0470730 AT1G18890.1 28.077 260 134 6 16 224 65 322 4.74e-25 103
Msa0470730 AT5G01820.1 29.004 231 130 4 5 201 13 243 5.06e-25 102
Msa0470730 AT5G23580.1 27.444 266 140 6 12 226 20 283 6.44e-25 102
Msa0470730 AT3G10540.1 27.239 268 151 3 6 231 37 302 1.02e-24 102
Msa0470730 AT3G61960.2 27.876 226 125 4 11 200 7 230 1.03e-24 102
Msa0470730 AT3G61960.1 27.876 226 125 4 11 200 7 230 1.08e-24 102
Msa0470730 AT5G07070.1 29.004 231 126 5 14 207 12 241 1.58e-24 101
Msa0470730 AT5G09890.1 27.302 315 132 8 5 224 93 405 3.28e-24 100
Msa0470730 AT5G09890.2 27.302 315 132 8 5 224 93 405 3.35e-24 100
Msa0470730 AT4G04740.2 29.528 254 114 9 28 224 83 328 3.58e-24 100
Msa0470730 AT4G04740.4 29.528 254 114 9 28 224 83 328 3.97e-24 100
Msa0470730 AT4G04740.6 29.528 254 114 9 28 224 83 328 3.97e-24 100
Msa0470730 AT4G04740.5 29.528 254 114 9 28 224 83 328 3.97e-24 100
Msa0470730 AT4G04740.3 29.528 254 114 9 28 224 83 328 3.97e-24 100
Msa0470730 AT4G04740.1 29.528 254 114 9 28 224 83 328 3.97e-24 100
Msa0470730 AT4G04740.7 29.528 254 114 9 28 224 83 328 3.97e-24 100
Msa0470730 AT1G76040.2 28.030 264 137 6 14 226 112 373 5.45e-24 100
Msa0470730 AT1G76040.3 28.030 264 137 6 14 226 112 373 5.85e-24 99.8
Msa0470730 AT5G04870.1 27.099 262 138 6 14 224 150 409 1.25e-23 99.4
Msa0470730 AT3G10660.2 27.099 262 138 6 14 224 186 445 2.88e-23 98.2
Msa0470730 AT3G10660.1 27.099 262 138 6 14 224 186 445 2.88e-23 98.2
Msa0470730 AT2G20470.3 26.056 284 137 4 5 215 115 398 5.59e-23 97.1
Msa0470730 AT2G20470.2 26.056 284 137 4 5 215 115 398 5.69e-23 97.4
Msa0470730 AT2G20470.1 26.056 284 137 4 5 215 115 398 5.69e-23 97.4
Msa0470730 AT1G78290.3 31.154 260 131 7 14 230 4 258 8.16e-23 95.1
Msa0470730 AT1G78290.2 31.154 260 131 7 14 230 4 258 8.16e-23 95.1
Msa0470730 AT4G33080.2 27.103 321 123 8 10 225 90 404 1.06e-22 96.3
Msa0470730 AT5G18700.1 30.242 248 126 6 11 221 1 238 1.07e-22 96.7
Msa0470730 AT4G33080.1 27.103 321 123 8 10 225 90 404 1.37e-22 95.9
Msa0470730 AT2G17890.1 27.574 272 142 7 14 232 108 377 1.37e-22 96.3
Msa0470730 AT1G50240.3 27.413 259 143 5 11 226 3 259 1.40e-22 96.3
Msa0470730 AT1G50240.2 27.413 259 143 5 11 226 3 259 1.40e-22 96.3
Msa0470730 AT4G04710.2 26.592 267 137 7 14 227 36 296 2.61e-22 95.1
Msa0470730 AT1G30640.3 25.159 314 141 5 5 224 18 331 2.82e-22 95.1
Msa0470730 AT1G12680.1 26.022 269 142 7 3 223 96 355 3.35e-22 94.7
Msa0470730 AT3G53930.2 28.319 226 124 5 11 200 17 240 3.97e-22 95.1
Msa0470730 AT1G30640.2 25.159 314 141 5 5 224 111 424 4.32e-22 94.7
Msa0470730 AT1G30640.1 25.159 314 141 5 5 224 111 424 4.32e-22 94.7
Msa0470730 AT3G53930.1 28.319 226 124 5 11 200 17 240 4.37e-22 94.7
Msa0470730 AT3G23310.1 25.723 311 139 6 5 223 111 421 4.57e-22 94.7
Msa0470730 AT3G51850.3 27.692 260 135 6 16 224 56 313 9.45e-22 93.2
Msa0470730 AT2G37840.1 28.319 226 124 5 11 200 9 232 1.03e-21 94.0
Msa0470730 AT3G51850.2 27.692 260 135 6 16 224 56 313 1.13e-21 93.2
Msa0470730 AT3G51850.1 27.692 260 135 6 16 224 56 313 1.26e-21 93.2
Msa0470730 AT5G08590.1 27.239 268 138 6 11 226 1 263 2.44e-21 91.3
Msa0470730 AT1G12580.1 25.856 263 142 6 14 225 44 304 2.88e-21 92.4
Msa0470730 AT1G60940.1 27.239 268 138 6 11 226 1 263 4.15e-21 90.9
Msa0470730 AT1G60940.2 27.239 268 138 6 11 226 1 263 4.15e-21 90.9
Msa0470730 AT4G04710.4 25.000 276 143 7 14 227 36 309 5.21e-21 91.3
Msa0470730 AT4G04710.1 25.000 276 143 7 14 227 36 309 6.16e-21 91.3
Msa0470730 AT5G63650.1 26.866 268 139 6 11 226 1 263 9.33e-21 89.7
Msa0470730 AT4G14350.3 25.161 310 142 6 5 224 110 419 9.71e-21 90.9
Msa0470730 AT4G14350.2 25.161 310 142 6 5 224 110 419 1.00e-20 90.9
Msa0470730 AT4G14350.1 25.161 310 142 6 5 224 110 419 1.00e-20 90.9
Msa0470730 AT4G14350.4 25.161 310 142 6 5 224 110 419 1.00e-20 90.9
Msa0470730 AT3G50530.1 27.239 268 138 8 14 226 148 413 1.02e-20 90.9
Msa0470730 AT1G49580.1 27.444 266 134 9 15 224 151 413 1.73e-20 90.1
Msa0470730 AT3G52890.2 44.565 92 51 0 130 221 769 860 4.89e-20 89.0
Msa0470730 AT3G52890.4 44.565 92 51 0 130 221 769 860 4.89e-20 89.0
Msa0470730 AT3G52890.1 44.565 92 51 0 130 221 769 860 4.89e-20 89.0
Msa0470730 AT3G52890.3 44.565 92 51 0 130 221 769 860 4.89e-20 89.0
Msa0470730 AT4G04695.1 27.170 265 136 7 16 225 30 292 1.32e-19 87.4
Msa0470730 AT3G19100.1 27.444 266 134 9 14 223 144 406 2.17e-19 87.0
Msa0470730 AT4G40010.1 29.389 262 126 9 14 222 4 259 4.83e-19 84.7
Msa0470730 AT5G03640.2 43.478 92 52 0 130 221 768 859 5.16e-19 85.9
Msa0470730 AT5G03640.1 43.478 92 52 0 130 221 768 859 5.16e-19 85.9
Msa0470730 AT5G58140.6 25.279 269 140 3 14 221 577 845 5.66e-19 85.9
Msa0470730 AT5G58140.7 25.279 269 140 3 14 221 577 845 5.66e-19 85.9
Msa0470730 AT5G58140.5 25.279 269 140 3 14 221 577 845 5.66e-19 85.9
Msa0470730 AT5G58140.2 25.279 269 140 3 14 221 577 845 5.66e-19 85.9
Msa0470730 AT5G58140.1 25.279 269 140 3 14 221 577 845 5.66e-19 85.9
Msa0470730 AT5G58140.3 25.000 272 143 3 11 221 574 845 6.31e-19 85.9
Msa0470730 AT5G47750.1 43.478 92 52 0 130 221 417 508 7.68e-19 85.5
Msa0470730 AT3G04530.1 26.667 240 136 6 12 213 9 246 7.81e-19 83.2
Msa0470730 AT3G12690.1 33.577 137 80 2 92 221 358 490 3.00e-18 83.6
Msa0470730 AT3G12690.3 33.577 137 80 2 92 221 358 490 3.00e-18 83.6
Msa0470730 AT3G12690.2 33.577 137 80 2 92 221 358 490 3.00e-18 83.6
Msa0470730 AT1G79250.1 39.252 107 58 1 122 221 355 461 3.88e-18 83.2
Msa0470730 AT1G79250.3 39.252 107 58 1 122 221 355 461 3.88e-18 83.2
Msa0470730 AT1G79250.2 39.252 107 58 1 122 221 355 461 3.88e-18 83.2
Msa0470730 AT1G79250.4 39.252 107 58 1 122 221 355 461 3.88e-18 83.2
Msa0470730 AT2G20050.2 45.545 101 49 3 116 214 913 1009 4.72e-18 83.2
Msa0470730 AT2G20050.1 45.545 101 49 3 116 214 916 1012 5.05e-18 83.2
Msa0470730 AT1G63700.1 27.160 243 135 7 17 221 403 641 1.60e-17 81.6
Msa0470730 AT1G63700.2 27.160 243 135 7 17 221 403 641 1.60e-17 81.6
Msa0470730 AT1G16440.1 40.426 94 56 0 128 221 324 417 2.24e-17 80.9
Msa0470730 AT2G36350.1 41.304 92 54 0 130 221 788 879 2.35e-17 81.3
Msa0470730 AT3G44610.1 41.237 97 57 0 125 221 298 394 3.35e-17 80.5
Msa0470730 AT3G50530.2 24.161 298 140 8 14 226 148 444 3.56e-17 80.5
Msa0470730 AT3G45780.2 25.843 267 127 6 14 213 663 925 5.46e-17 80.1
Msa0470730 AT3G45780.1 25.843 267 127 6 14 213 663 925 5.46e-17 80.1
Msa0470730 AT2G41140.1 25.660 265 140 7 14 223 123 385 6.87e-17 79.7
Msa0470730 AT3G56760.1 26.038 265 139 7 14 223 124 386 8.39e-17 79.3
Msa0470730 AT1G30270.3 27.660 188 86 5 86 225 6 191 1.83e-16 77.8
Msa0470730 AT3G27580.2 40.217 92 55 0 130 221 406 497 2.79e-16 77.8
Msa0470730 AT3G27580.1 40.217 92 55 0 130 221 406 497 2.79e-16 77.8
Msa0470730 AT1G53570.5 30.837 227 137 8 17 229 217 437 3.52e-16 77.4
Msa0470730 AT4G26610.1 39.130 92 56 0 130 221 346 437 4.02e-16 77.4
Msa0470730 AT5G55910.2 39.130 92 56 0 130 221 336 427 5.05e-16 77.0
Msa0470730 AT5G55910.1 39.130 92 56 0 130 221 336 427 5.05e-16 77.0
Msa0470730 AT5G66850.2 26.570 207 109 5 17 181 349 554 6.67e-16 76.6
Msa0470730 AT5G57630.3 31.081 148 87 5 54 200 8 141 8.07e-16 75.5
Msa0470730 AT2G46700.1 22.761 268 152 8 14 227 143 409 2.02e-15 75.5
Msa0470730 AT2G44830.2 36.667 90 57 0 132 221 589 678 2.74e-15 75.1
Msa0470730 AT2G44830.3 36.667 90 57 0 132 221 589 678 2.74e-15 75.1
Msa0470730 AT2G44830.1 36.667 90 57 0 132 221 589 678 2.74e-15 75.1
Msa0470730 AT5G66850.1 24.686 239 135 6 17 213 349 584 3.19e-15 74.7
Msa0470730 AT2G26700.1 33.065 124 76 1 105 221 323 446 8.87e-15 73.6
Msa0470730 AT1G53165.2 27.843 255 127 7 20 224 21 268 1.45e-14 72.8
Msa0470730 AT1G53165.1 28.866 194 103 3 20 180 21 212 1.59e-14 72.8
Msa0470730 AT1G53165.3 28.866 194 103 3 20 180 21 212 1.63e-14 72.8
Msa0470730 AT1G51660.1 27.803 223 124 7 12 200 77 296 2.75e-14 71.6
Msa0470730 AT3G21220.2 28.000 225 125 8 10 200 66 287 3.57e-14 71.2
Msa0470730 AT3G21220.1 28.000 225 125 8 10 200 66 287 3.57e-14 71.2
Msa0470730 AT4G13000.1 43.284 67 38 0 127 193 216 282 1.33e-13 69.7
Msa0470730 AT3G25250.1 43.750 64 36 0 130 193 226 289 1.69e-13 69.3
Msa0470730 AT1G03920.1 37.864 103 47 2 139 224 334 436 1.75e-13 69.7
Msa0470730 AT1G03920.1 31.818 110 75 0 5 114 128 237 1.20e-11 64.3
Msa0470730 AT1G03920.3 37.864 103 47 2 139 224 334 436 1.75e-13 69.7
Msa0470730 AT1G03920.3 31.818 110 75 0 5 114 128 237 1.20e-11 64.3
Msa0470730 AT5G14720.1 25.792 221 120 8 1 180 1 218 3.68e-13 68.9
Msa0470730 AT5G14720.2 25.792 221 120 8 1 180 1 218 3.68e-13 68.9
Msa0470730 AT3G20830.1 35.632 87 53 1 135 221 239 322 1.75e-12 66.6
Msa0470730 AT5G40030.1 38.043 92 56 1 130 221 334 424 1.86e-12 66.6
Msa0470730 AT2G34650.1 36.842 95 57 1 130 221 281 375 2.10e-12 66.2
Msa0470730 AT1G51170.1 30.370 135 80 3 109 232 212 343 2.70e-12 65.9
Msa0470730 AT1G53700.1 41.176 85 49 1 138 221 297 381 3.35e-12 65.9
Msa0470730 AT1G48260.2 36.364 110 65 3 115 221 59 166 3.87e-12 65.1
Msa0470730 AT1G48260.4 36.364 110 65 3 115 221 59 166 3.87e-12 65.1
Msa0470730 AT1G48260.3 36.364 110 65 3 115 221 59 166 3.87e-12 65.1
Msa0470730 AT1G48260.5 36.364 110 65 3 115 221 59 166 3.87e-12 65.1
Msa0470730 AT3G14370.1 50.000 56 28 0 138 193 293 348 5.18e-12 65.1
Msa0470730 AT4G38230.1 33.103 145 72 5 98 227 8 142 6.54e-12 64.7
Msa0470730 AT4G24100.1 22.581 217 124 7 5 180 22 235 4.80e-11 62.4
Msa0470730 AT5G12480.2 28.000 150 90 5 90 223 76 223 5.17e-11 62.0
Msa0470730 AT4G24100.2 22.581 217 124 7 5 180 22 235 5.33e-11 62.4
Msa0470730 AT4G24100.4 22.581 217 124 7 5 180 38 251 5.45e-11 62.4
Msa0470730 AT4G24100.3 22.581 217 124 7 5 180 38 251 5.67e-11 62.4
Msa0470730 AT2G19400.1 40.260 77 44 1 139 213 311 387 7.77e-11 61.6

Find 59 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATTGAAGGTTATCTTTA+AGG 0.144377 3_3:+72941105 Msa0470730:CDS
CTTTGTTATGAATTCCTCTA+TGG 0.280997 3_3:+72942306 Msa0470730:CDS
TACCCCACTTATCAGATCTT+TGG 0.326895 3_3:-72942518 None:intergenic
CTATGTCGCCAGAGAAATTA+AGG 0.330128 3_3:+72940814 Msa0470730:CDS
CCAAACATCTTGCGTCTCTA+TGG 0.333886 3_3:+72941199 Msa0470730:CDS
ATGATTATGCAGTTGATAAC+TGG 0.345815 3_3:+72942271 Msa0470730:CDS
TTCGGTTACCTTAATTTCTC+TGG 0.348580 3_3:-72940822 None:intergenic
CTATGGTTGGTTTCATGATT+CGG 0.348945 3_3:+72941216 Msa0470730:CDS
GCTTTCACTTCAGGAGATAA+TGG 0.366839 3_3:+72942664 Msa0470730:intron
TAAATATGTGGTTGCATTGA+AGG 0.380338 3_3:+72941093 Msa0470730:CDS
CCATAGAGACGCAAGATGTT+TGG 0.381560 3_3:-72941199 None:intergenic
CCACTCGGGAGAGGCAAATT+CGG 0.384647 3_3:+72940785 Msa0470730:CDS
CCTGAAATGGTAGAAAATAA+AGG 0.387594 3_3:+72942246 Msa0470730:CDS
ATTCTTGAATATGCTCATAA+TGG 0.394700 3_3:+72941253 Msa0470730:CDS
TCTATCAACGACTTCGAAAT+CGG 0.401223 3_3:+72940758 Msa0470730:CDS
CAAACAACTTGGGAGGGAAA+TGG 0.428673 3_3:+72941153 Msa0470730:CDS
AGGAGATAATGGAGCATCCT+TGG 0.439736 3_3:+72942675 Msa0470730:intron
TACCCCTCTTGTTTCTAGAA+AGG 0.457586 3_3:+72942495 Msa0470730:CDS
AAAGAGAATGCAAATCATAC+TGG 0.462053 3_3:+72942701 Msa0470730:CDS
CGTCTAAAGATTGCAGACTT+TGG 0.462715 3_3:+72942153 Msa0470730:CDS
TAATGGATCAAAATCAGAAA+CGG 0.475649 3_3:+72940729 Msa0470730:exon
CAGAGAAATGACCTCTTTCG+CGG 0.476332 3_3:-72941294 None:intergenic
GGATTATTTAGCTCCTGAAA+TGG 0.479853 3_3:+72942233 Msa0470730:CDS
AATGGATCAAAATCAGAAAC+GGG 0.481683 3_3:+72940730 Msa0470730:exon
CTATGGTGTTCCTCCGTTCG+AGG 0.485879 3_3:+72942323 Msa0470730:CDS
TACATGTTGCTCCGCGAAAG+AGG 0.500176 3_3:+72941283 Msa0470730:CDS
ATCAAAATCAGAAACGGGAT+TGG 0.500569 3_3:+72940735 Msa0470730:CDS
TCGAAATCGGAAAGCCACTC+GGG 0.502135 3_3:+72940771 Msa0470730:CDS
ACATCTTGCGTCTCTATGGT+TGG 0.508211 3_3:+72941203 Msa0470730:CDS
TATCAACTTCACAAACAACT+TGG 0.509318 3_3:+72941142 Msa0470730:CDS
ATCGGAAAGCCACTCGGGAG+AGG 0.517135 3_3:+72940776 Msa0470730:CDS
TAAAGATTGCAGACTTTGGT+TGG 0.522865 3_3:+72942157 Msa0470730:CDS
GCAGTTGATAACTGGACTCT+AGG 0.539958 3_3:+72942279 Msa0470730:CDS
TTCGAAATCGGAAAGCCACT+CGG 0.545886 3_3:+72940770 Msa0470730:CDS
CTCTGAGAAACAAGCTGCAA+CGG 0.549942 3_3:+72941312 Msa0470730:CDS
AAGGCCAAAGATCTGATAAG+TGG 0.550726 3_3:+72942514 Msa0470730:CDS
TCTTGACTTTCAGCCTCGAA+CGG 0.554695 3_3:-72942336 None:intergenic
AGGCCAAAGATCTGATAAGT+GGG 0.573784 3_3:+72942515 Msa0470730:CDS
TGGCCTTTCTAGAAACAAGA+GGG 0.576918 3_3:-72942498 None:intergenic
AACTTCACAAACAACTTGGG+AGG 0.583731 3_3:+72941146 Msa0470730:CDS
TGCCCTTCCATACCTTCTGA+AGG 0.584251 3_3:-72942364 None:intergenic
CCGAATTTGCCTCTCCCGAG+TGG 0.586930 3_3:-72940785 None:intergenic
TCATACTGGTGTCTGCAAGT+AGG 0.593730 3_3:+72942715 Msa0470730:CDS
ATCAACTTCACAAACAACTT+GGG 0.594257 3_3:+72941143 Msa0470730:CDS
TGACTTTCAGCCTCGAACGG+AGG 0.597105 3_3:-72942333 None:intergenic
CTAGAAACAAGAGGGGTACG+AGG 0.606627 3_3:-72942490 None:intergenic
TTGGCCTTTCTAGAAACAAG+AGG 0.613634 3_3:-72942499 None:intergenic
TGTTGATAGAACACACGAGA+GGG 0.617146 3_3:-72940674 None:intergenic
ACTTCACAAACAACTTGGGA+GGG 0.622779 3_3:+72941147 Msa0470730:CDS
CGAACGGAGGAACACCATAG+AGG 0.623384 3_3:-72942320 None:intergenic
GGTGAATCGCACAAAAGAGA+GGG 0.626221 3_3:-72940653 None:intergenic
GGGTGAATCGCACAAAAGAG+AGG 0.629714 3_3:-72940654 None:intergenic
GTCAAGATGATACCTTCAGA+AGG 0.631570 3_3:+72942352 Msa0470730:CDS
ATAATCCAATGTTCCACACA+TGG 0.632875 3_3:-72942217 None:intergenic
CATAGAGGAATTCATAACAA+AGG 0.651900 3_3:-72942305 None:intergenic
TAGAAACAAGAGGGGTACGA+GGG 0.665820 3_3:-72942489 None:intergenic
GGCCAAAGATCTGATAAGTG+GGG 0.677830 3_3:+72942516 Msa0470730:CDS
GGCCTTTCTAGAAACAAGAG+GGG 0.679127 3_3:-72942497 None:intergenic
TTGTTGATAGAACACACGAG+AGG 0.690910 3_3:-72940675 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTACATTATATTAATATAT+TGG - chr3_3:72942423-72942442 None:intergenic 10.0%
!! AGTACATTATATTAATATAT+TGG - chr3_3:72942423-72942442 None:intergenic 10.0%
!! AAAATAAATATGATATAAGC+GGG - chr3_3:72940979-72940998 None:intergenic 15.0%
!! GAAAATAAATATGATATAAG+CGG - chr3_3:72940980-72940999 None:intergenic 15.0%
!! CAATTAGTAAAAAAATCTAT+TGG - chr3_3:72941057-72941076 None:intergenic 15.0%
!! ATTGTAAATTTGTAATGAAA+TGG + chr3_3:72941467-72941486 Msa0470730:intron 15.0%
!! TTGTAAATTTGTAATGAAAT+GGG + chr3_3:72941468-72941487 Msa0470730:intron 15.0%
!! ATTTACAAAAATGTCTAAAT+AGG + chr3_3:72941541-72941560 Msa0470730:intron 15.0%
!! TATATTTAAAGAAAATCGTT+GGG + chr3_3:72942040-72942059 Msa0470730:intron 15.0%
!!! TTATATTAATTTGAGTTTTG+AGG + chr3_3:72942089-72942108 Msa0470730:intron 15.0%
!! TTATATTAATATATTGGAAG+TGG - chr3_3:72942417-72942436 None:intergenic 15.0%
!! TGATTATATCATATTATACT+AGG + chr3_3:72942548-72942567 Msa0470730:intron 15.0%
!! AAAATAAATATGATATAAGC+GGG - chr3_3:72940979-72940998 None:intergenic 15.0%
!! GAAAATAAATATGATATAAG+CGG - chr3_3:72940980-72940999 None:intergenic 15.0%
!! CAATTAGTAAAAAAATCTAT+TGG - chr3_3:72941057-72941076 None:intergenic 15.0%
!! ATTGTAAATTTGTAATGAAA+TGG + chr3_3:72941467-72941486 Msa0470730:intron 15.0%
!! TTGTAAATTTGTAATGAAAT+GGG + chr3_3:72941468-72941487 Msa0470730:intron 15.0%
!! ATTTACAAAAATGTCTAAAT+AGG + chr3_3:72941541-72941560 Msa0470730:intron 15.0%
!! TATATTTAAAGAAAATCGTT+GGG + chr3_3:72942040-72942059 Msa0470730:intron 15.0%
!!! TTATATTAATTTGAGTTTTG+AGG + chr3_3:72942089-72942108 Msa0470730:intron 15.0%
!! TTATATTAATATATTGGAAG+TGG - chr3_3:72942417-72942436 None:intergenic 15.0%
!! TGATTATATCATATTATACT+AGG + chr3_3:72942548-72942567 Msa0470730:intron 15.0%
!! GGAAAAAGAAAAAGAAAATT+CGG - chr3_3:72940843-72940862 None:intergenic 20.0%
!! TATTTGATGCATGATATAAA+AGG - chr3_3:72940864-72940883 None:intergenic 20.0%
!!! TTCTAGAAAATGCTATTAAT+AGG - chr3_3:72940907-72940926 None:intergenic 20.0%
!!! ATTAATAGCATTTTCTAGAA+TGG + chr3_3:72940907-72940926 Msa0470730:intron 20.0%
!!! TTAATAGCATTTTCTAGAAT+GGG + chr3_3:72940908-72940927 Msa0470730:intron 20.0%
!! TTGTATATTTAGGTAATGTT+TGG + chr3_3:72940932-72940951 Msa0470730:intron 20.0%
!! AAATAAATATGATATAAGCG+GGG - chr3_3:72940978-72940997 None:intergenic 20.0%
!!! TAAGTAGATTTTTCAAATAC+AGG + chr3_3:72941007-72941026 Msa0470730:intron 20.0%
!! GAAAAATTCAAATATTGAGT+GGG + chr3_3:72941029-72941048 Msa0470730:intron 20.0%
!!! TTTTTTTCAGAGTAAATATG+TGG + chr3_3:72941081-72941100 Msa0470730:intron 20.0%
!! GTATATTTAAAGAAAATCGT+TGG + chr3_3:72942039-72942058 Msa0470730:intron 20.0%
!!! TTTTTGAAGAATCTTTTATC+AGG - chr3_3:72942643-72942662 None:intergenic 20.0%
!! TGATAAAAGATTCTTCAAAA+AGG + chr3_3:72942642-72942661 Msa0470730:intron 20.0%
!! GGAAAAAGAAAAAGAAAATT+CGG - chr3_3:72940843-72940862 None:intergenic 20.0%
!! TATTTGATGCATGATATAAA+AGG - chr3_3:72940864-72940883 None:intergenic 20.0%
!!! TTCTAGAAAATGCTATTAAT+AGG - chr3_3:72940907-72940926 None:intergenic 20.0%
!!! ATTAATAGCATTTTCTAGAA+TGG + chr3_3:72940907-72940926 Msa0470730:intron 20.0%
!!! TTAATAGCATTTTCTAGAAT+GGG + chr3_3:72940908-72940927 Msa0470730:intron 20.0%
!! TTGTATATTTAGGTAATGTT+TGG + chr3_3:72940932-72940951 Msa0470730:intron 20.0%
!! AAATAAATATGATATAAGCG+GGG - chr3_3:72940978-72940997 None:intergenic 20.0%
!!! TAAGTAGATTTTTCAAATAC+AGG + chr3_3:72941007-72941026 Msa0470730:intron 20.0%
!! GAAAAATTCAAATATTGAGT+GGG + chr3_3:72941029-72941048 Msa0470730:intron 20.0%
!!! TTTTTTTCAGAGTAAATATG+TGG + chr3_3:72941081-72941100 Msa0470730:intron 20.0%
!! GTATATTTAAAGAAAATCGT+TGG + chr3_3:72942039-72942058 Msa0470730:intron 20.0%
!!! TTTTTGAAGAATCTTTTATC+AGG - chr3_3:72942643-72942662 None:intergenic 20.0%
!! TGATAAAAGATTCTTCAAAA+AGG + chr3_3:72942642-72942661 Msa0470730:intron 20.0%
! TTCTCAAAAAACAAACCTAA+TGG + chr3_3:72940712-72940731 Msa0470730:exon 25.0%
!! TAATGGATCAAAATCAGAAA+CGG + chr3_3:72940729-72940748 Msa0470730:exon 25.0%
! TAGAATGGGATTGTATATTT+AGG + chr3_3:72940922-72940941 Msa0470730:intron 25.0%
! GGAAAAATTCAAATATTGAG+TGG + chr3_3:72941028-72941047 Msa0470730:intron 25.0%
! ATTCTTGAATATGCTCATAA+TGG + chr3_3:72941253-72941272 Msa0470730:CDS 25.0%
!! CATGTCTCTGATAATTTTAA+CGG + chr3_3:72941436-72941455 Msa0470730:intron 25.0%
! GTAATGAAATGGGTATAATA+TGG + chr3_3:72941478-72941497 Msa0470730:intron 25.0%
! ACAAAAATGTCTAAATAGGA+AGG + chr3_3:72941545-72941564 Msa0470730:intron 25.0%
! CAAAAATGTCTAAATAGGAA+GGG + chr3_3:72941546-72941565 Msa0470730:intron 25.0%
! ATGAATAAAAAGATACCTCA+TGG - chr3_3:72941758-72941777 None:intergenic 25.0%
! AAAACAAATAATGTTAGCGT+TGG - chr3_3:72941804-72941823 None:intergenic 25.0%
! TTCTCAAAAAACAAACCTAA+TGG + chr3_3:72940712-72940731 Msa0470730:exon 25.0%
!! TAATGGATCAAAATCAGAAA+CGG + chr3_3:72940729-72940748 Msa0470730:exon 25.0%
! TAGAATGGGATTGTATATTT+AGG + chr3_3:72940922-72940941 Msa0470730:intron 25.0%
! GGAAAAATTCAAATATTGAG+TGG + chr3_3:72941028-72941047 Msa0470730:intron 25.0%
! ATTCTTGAATATGCTCATAA+TGG + chr3_3:72941253-72941272 Msa0470730:CDS 25.0%
!! CATGTCTCTGATAATTTTAA+CGG + chr3_3:72941436-72941455 Msa0470730:intron 25.0%
! GTAATGAAATGGGTATAATA+TGG + chr3_3:72941478-72941497 Msa0470730:intron 25.0%
! ACAAAAATGTCTAAATAGGA+AGG + chr3_3:72941545-72941564 Msa0470730:intron 25.0%
! CAAAAATGTCTAAATAGGAA+GGG + chr3_3:72941546-72941565 Msa0470730:intron 25.0%
! ATGAATAAAAAGATACCTCA+TGG - chr3_3:72941758-72941777 None:intergenic 25.0%
! AAAACAAATAATGTTAGCGT+TGG - chr3_3:72941804-72941823 None:intergenic 25.0%
!! GTTTCTGATTTTGATCCATT+AGG - chr3_3:72940730-72940749 None:intergenic 30.0%
AATGGATCAAAATCAGAAAC+GGG + chr3_3:72940730-72940749 Msa0470730:exon 30.0%
TAAATATGTGGTTGCATTGA+AGG + chr3_3:72941093-72941112 Msa0470730:CDS 30.0%
TGCATTGAAGGTTATCTTTA+AGG + chr3_3:72941105-72941124 Msa0470730:CDS 30.0%
TATCAACTTCACAAACAACT+TGG + chr3_3:72941142-72941161 Msa0470730:CDS 30.0%
ATCAACTTCACAAACAACTT+GGG + chr3_3:72941143-72941162 Msa0470730:CDS 30.0%
TTCAAAGACATAGTACGATA+TGG - chr3_3:72941386-72941405 None:intergenic 30.0%
ACTATGTCTTTGAACTTCTT+AGG + chr3_3:72941392-72941411 Msa0470730:intron 30.0%
TGAAAATTGGATTCAAAGCT+AGG + chr3_3:72941512-72941531 Msa0470730:intron 30.0%
AGAGTCAGTATTCAAAGATT+TGG - chr3_3:72941618-72941637 None:intergenic 30.0%
! ATAATGTTAGCGTTGGAAAA+GGG - chr3_3:72941797-72941816 None:intergenic 30.0%
! AATAATGTTAGCGTTGGAAA+AGG - chr3_3:72941798-72941817 None:intergenic 30.0%
!! TTGTTTTCTTCGCTTTGTTA+TGG + chr3_3:72941817-72941836 Msa0470730:intron 30.0%
TTGCAGTTCATTTCAATCTT+AGG + chr3_3:72942000-72942019 Msa0470730:intron 30.0%
! TTTGATAATCGCTTGTTTAC+AGG + chr3_3:72942128-72942147 Msa0470730:intron 30.0%
! TTGATAATCGCTTGTTTACA+GGG + chr3_3:72942129-72942148 Msa0470730:intron 30.0%
AAAAAGAGAAAAACCATGTG+TGG + chr3_3:72942204-72942223 Msa0470730:CDS 30.0%
!!! CCTTTATTTTCTACCATTTC+AGG - chr3_3:72942249-72942268 None:intergenic 30.0%
CCTGAAATGGTAGAAAATAA+AGG + chr3_3:72942246-72942265 Msa0470730:CDS 30.0%
!! ATGATTATGCAGTTGATAAC+TGG + chr3_3:72942271-72942290 Msa0470730:CDS 30.0%
CATAGAGGAATTCATAACAA+AGG - chr3_3:72942308-72942327 None:intergenic 30.0%
! CTTTGTTATGAATTCCTCTA+TGG + chr3_3:72942306-72942325 Msa0470730:CDS 30.0%
TTATAAATTCAAACGTGTGC+AGG + chr3_3:72942443-72942462 Msa0470730:intron 30.0%
! TTTGCATTCTCTTTTATCCA+AGG - chr3_3:72942695-72942714 None:intergenic 30.0%
AAAGAGAATGCAAATCATAC+TGG + chr3_3:72942701-72942720 Msa0470730:CDS 30.0%
!! GTTTCTGATTTTGATCCATT+AGG - chr3_3:72940730-72940749 None:intergenic 30.0%
AATGGATCAAAATCAGAAAC+GGG + chr3_3:72940730-72940749 Msa0470730:exon 30.0%
TAAATATGTGGTTGCATTGA+AGG + chr3_3:72941093-72941112 Msa0470730:CDS 30.0%
TGCATTGAAGGTTATCTTTA+AGG + chr3_3:72941105-72941124 Msa0470730:CDS 30.0%
TATCAACTTCACAAACAACT+TGG + chr3_3:72941142-72941161 Msa0470730:CDS 30.0%
ATCAACTTCACAAACAACTT+GGG + chr3_3:72941143-72941162 Msa0470730:CDS 30.0%
TTCAAAGACATAGTACGATA+TGG - chr3_3:72941386-72941405 None:intergenic 30.0%
ACTATGTCTTTGAACTTCTT+AGG + chr3_3:72941392-72941411 Msa0470730:intron 30.0%
TGAAAATTGGATTCAAAGCT+AGG + chr3_3:72941512-72941531 Msa0470730:intron 30.0%
AGAGTCAGTATTCAAAGATT+TGG - chr3_3:72941618-72941637 None:intergenic 30.0%
! ATAATGTTAGCGTTGGAAAA+GGG - chr3_3:72941797-72941816 None:intergenic 30.0%
! AATAATGTTAGCGTTGGAAA+AGG - chr3_3:72941798-72941817 None:intergenic 30.0%
!! TTGTTTTCTTCGCTTTGTTA+TGG + chr3_3:72941817-72941836 Msa0470730:intron 30.0%
TTGCAGTTCATTTCAATCTT+AGG + chr3_3:72942000-72942019 Msa0470730:intron 30.0%
! TTTGATAATCGCTTGTTTAC+AGG + chr3_3:72942128-72942147 Msa0470730:intron 30.0%
! TTGATAATCGCTTGTTTACA+GGG + chr3_3:72942129-72942148 Msa0470730:intron 30.0%
AAAAAGAGAAAAACCATGTG+TGG + chr3_3:72942204-72942223 Msa0470730:CDS 30.0%
!!! CCTTTATTTTCTACCATTTC+AGG - chr3_3:72942249-72942268 None:intergenic 30.0%
CCTGAAATGGTAGAAAATAA+AGG + chr3_3:72942246-72942265 Msa0470730:CDS 30.0%
!! ATGATTATGCAGTTGATAAC+TGG + chr3_3:72942271-72942290 Msa0470730:CDS 30.0%
CATAGAGGAATTCATAACAA+AGG - chr3_3:72942308-72942327 None:intergenic 30.0%
! CTTTGTTATGAATTCCTCTA+TGG + chr3_3:72942306-72942325 Msa0470730:CDS 30.0%
TTATAAATTCAAACGTGTGC+AGG + chr3_3:72942443-72942462 Msa0470730:intron 30.0%
! TTTGCATTCTCTTTTATCCA+AGG - chr3_3:72942695-72942714 None:intergenic 30.0%
AAAGAGAATGCAAATCATAC+TGG + chr3_3:72942701-72942720 Msa0470730:CDS 30.0%
ATCAAAATCAGAAACGGGAT+TGG + chr3_3:72940735-72940754 Msa0470730:CDS 35.0%
TCTATCAACGACTTCGAAAT+CGG + chr3_3:72940758-72940777 Msa0470730:CDS 35.0%
TTCGGTTACCTTAATTTCTC+TGG - chr3_3:72940825-72940844 None:intergenic 35.0%
!! CTATGGTTGGTTTCATGATT+CGG + chr3_3:72941216-72941235 Msa0470730:CDS 35.0%
GGATTACAGCAAGTGAAAAT+TGG + chr3_3:72941499-72941518 Msa0470730:intron 35.0%
! GTACATTTTAAGCCTCACAA+AGG + chr3_3:72941665-72941684 Msa0470730:intron 35.0%
AATATGTCAATGCCTTTGTG+AGG - chr3_3:72941680-72941699 None:intergenic 35.0%
TGGAAAAGGGCGATAAAAAT+AGG - chr3_3:72941784-72941803 None:intergenic 35.0%
GAACTGCAATAAAATCGTTG+TGG - chr3_3:72941989-72942008 None:intergenic 35.0%
!! TTGGGAATTAGTTTGTGAGT+TGG + chr3_3:72942058-72942077 Msa0470730:intron 35.0%
TAAAGATTGCAGACTTTGGT+TGG + chr3_3:72942157-72942176 Msa0470730:CDS 35.0%
AAAAACCATGTGTGGAACAT+TGG + chr3_3:72942212-72942231 Msa0470730:CDS 35.0%
ATAATCCAATGTTCCACACA+TGG - chr3_3:72942220-72942239 None:intergenic 35.0%
! GGATTATTTAGCTCCTGAAA+TGG + chr3_3:72942233-72942252 Msa0470730:CDS 35.0%
! CTATCTTCATTTTCACATCC+AGG + chr3_3:72942574-72942593 Msa0470730:intron 35.0%
! TCATTTTCACATCCAGGATT+AGG + chr3_3:72942580-72942599 Msa0470730:intron 35.0%
TAAGAAGAACAACCTAATCC+TGG - chr3_3:72942595-72942614 None:intergenic 35.0%
TTCAAAAAGGCTTTCACTTC+AGG + chr3_3:72942655-72942674 Msa0470730:intron 35.0%
ATCAAAATCAGAAACGGGAT+TGG + chr3_3:72940735-72940754 Msa0470730:CDS 35.0%
TCTATCAACGACTTCGAAAT+CGG + chr3_3:72940758-72940777 Msa0470730:CDS 35.0%
TTCGGTTACCTTAATTTCTC+TGG - chr3_3:72940825-72940844 None:intergenic 35.0%
!! CTATGGTTGGTTTCATGATT+CGG + chr3_3:72941216-72941235 Msa0470730:CDS 35.0%
GGATTACAGCAAGTGAAAAT+TGG + chr3_3:72941499-72941518 Msa0470730:intron 35.0%
! GTACATTTTAAGCCTCACAA+AGG + chr3_3:72941665-72941684 Msa0470730:intron 35.0%
AATATGTCAATGCCTTTGTG+AGG - chr3_3:72941680-72941699 None:intergenic 35.0%
TGGAAAAGGGCGATAAAAAT+AGG - chr3_3:72941784-72941803 None:intergenic 35.0%
GAACTGCAATAAAATCGTTG+TGG - chr3_3:72941989-72942008 None:intergenic 35.0%
!! TTGGGAATTAGTTTGTGAGT+TGG + chr3_3:72942058-72942077 Msa0470730:intron 35.0%
TAAAGATTGCAGACTTTGGT+TGG + chr3_3:72942157-72942176 Msa0470730:CDS 35.0%
AAAAACCATGTGTGGAACAT+TGG + chr3_3:72942212-72942231 Msa0470730:CDS 35.0%
ATAATCCAATGTTCCACACA+TGG - chr3_3:72942220-72942239 None:intergenic 35.0%
! GGATTATTTAGCTCCTGAAA+TGG + chr3_3:72942233-72942252 Msa0470730:CDS 35.0%
! CTATCTTCATTTTCACATCC+AGG + chr3_3:72942574-72942593 Msa0470730:intron 35.0%
! TCATTTTCACATCCAGGATT+AGG + chr3_3:72942580-72942599 Msa0470730:intron 35.0%
TAAGAAGAACAACCTAATCC+TGG - chr3_3:72942595-72942614 None:intergenic 35.0%
TTCAAAAAGGCTTTCACTTC+AGG + chr3_3:72942655-72942674 Msa0470730:intron 35.0%
! TGTTGATAGAACACACGAGA+GGG - chr3_3:72940677-72940696 None:intergenic 40.0%
! TTGTTGATAGAACACACGAG+AGG - chr3_3:72940678-72940697 None:intergenic 40.0%
CTATGTCGCCAGAGAAATTA+AGG + chr3_3:72940814-72940833 Msa0470730:CDS 40.0%
AACTTCACAAACAACTTGGG+AGG + chr3_3:72941146-72941165 Msa0470730:CDS 40.0%
ACTTCACAAACAACTTGGGA+GGG + chr3_3:72941147-72941166 Msa0470730:CDS 40.0%
TCGTATTCCTGTATCTGTGT+TGG + chr3_3:72941353-72941372 Msa0470730:intron 40.0%
ATTCCTGTATCTGTGTTGGA+TGG + chr3_3:72941357-72941376 Msa0470730:intron 40.0%
ATACCATCCAACACAGATAC+AGG - chr3_3:72941363-72941382 None:intergenic 40.0%
TGTGAATAACATGCTTCTCG+TGG - chr3_3:72941704-72941723 None:intergenic 40.0%
! ACGAGAAGCATGTTATTCAC+AGG + chr3_3:72941703-72941722 Msa0470730:intron 40.0%
! CGAGAAGCATGTTATTCACA+GGG + chr3_3:72941704-72941723 Msa0470730:intron 40.0%
! TGGTCAAGCAACAGATTTTC+AGG - chr3_3:72941738-72941757 None:intergenic 40.0%
! AAATCTGTTGCTTGACCATG+AGG + chr3_3:72941740-72941759 Msa0470730:intron 40.0%
CCAAACATGCACAACTACTT+TGG - chr3_3:72941934-72941953 None:intergenic 40.0%
CCAAAGTAGTTGTGCATGTT+TGG + chr3_3:72941931-72941950 Msa0470730:intron 40.0%
CGTCTAAAGATTGCAGACTT+TGG + chr3_3:72942153-72942172 Msa0470730:CDS 40.0%
GTCAAGATGATACCTTCAGA+AGG + chr3_3:72942352-72942371 Msa0470730:CDS 40.0%
GATGATACCTTCAGAAGGTA+TGG + chr3_3:72942357-72942376 Msa0470730:intron 40.0%
! ATACCTTCAGAAGGTATGGA+AGG + chr3_3:72942361-72942380 Msa0470730:intron 40.0%
! TACCTTCAGAAGGTATGGAA+GGG + chr3_3:72942362-72942381 Msa0470730:intron 40.0%
!! TACCCCTCTTGTTTCTAGAA+AGG + chr3_3:72942495-72942514 Msa0470730:CDS 40.0%
! TGGCCTTTCTAGAAACAAGA+GGG - chr3_3:72942501-72942520 None:intergenic 40.0%
! TTGGCCTTTCTAGAAACAAG+AGG - chr3_3:72942502-72942521 None:intergenic 40.0%
AAGGCCAAAGATCTGATAAG+TGG + chr3_3:72942514-72942533 Msa0470730:CDS 40.0%
AGGCCAAAGATCTGATAAGT+GGG + chr3_3:72942515-72942534 Msa0470730:CDS 40.0%
TACCCCACTTATCAGATCTT+TGG - chr3_3:72942521-72942540 None:intergenic 40.0%
GCTTTCACTTCAGGAGATAA+TGG + chr3_3:72942664-72942683 Msa0470730:intron 40.0%
! TGTTGATAGAACACACGAGA+GGG - chr3_3:72940677-72940696 None:intergenic 40.0%
! TTGTTGATAGAACACACGAG+AGG - chr3_3:72940678-72940697 None:intergenic 40.0%
CTATGTCGCCAGAGAAATTA+AGG + chr3_3:72940814-72940833 Msa0470730:CDS 40.0%
AACTTCACAAACAACTTGGG+AGG + chr3_3:72941146-72941165 Msa0470730:CDS 40.0%
ACTTCACAAACAACTTGGGA+GGG + chr3_3:72941147-72941166 Msa0470730:CDS 40.0%
TCGTATTCCTGTATCTGTGT+TGG + chr3_3:72941353-72941372 Msa0470730:intron 40.0%
ATTCCTGTATCTGTGTTGGA+TGG + chr3_3:72941357-72941376 Msa0470730:intron 40.0%
ATACCATCCAACACAGATAC+AGG - chr3_3:72941363-72941382 None:intergenic 40.0%
TGTGAATAACATGCTTCTCG+TGG - chr3_3:72941704-72941723 None:intergenic 40.0%
! ACGAGAAGCATGTTATTCAC+AGG + chr3_3:72941703-72941722 Msa0470730:intron 40.0%
! CGAGAAGCATGTTATTCACA+GGG + chr3_3:72941704-72941723 Msa0470730:intron 40.0%
! TGGTCAAGCAACAGATTTTC+AGG - chr3_3:72941738-72941757 None:intergenic 40.0%
! AAATCTGTTGCTTGACCATG+AGG + chr3_3:72941740-72941759 Msa0470730:intron 40.0%
CCAAACATGCACAACTACTT+TGG - chr3_3:72941934-72941953 None:intergenic 40.0%
CCAAAGTAGTTGTGCATGTT+TGG + chr3_3:72941931-72941950 Msa0470730:intron 40.0%
CGTCTAAAGATTGCAGACTT+TGG + chr3_3:72942153-72942172 Msa0470730:CDS 40.0%
GTCAAGATGATACCTTCAGA+AGG + chr3_3:72942352-72942371 Msa0470730:CDS 40.0%
GATGATACCTTCAGAAGGTA+TGG + chr3_3:72942357-72942376 Msa0470730:intron 40.0%
! ATACCTTCAGAAGGTATGGA+AGG + chr3_3:72942361-72942380 Msa0470730:intron 40.0%
! TACCTTCAGAAGGTATGGAA+GGG + chr3_3:72942362-72942381 Msa0470730:intron 40.0%
!! TACCCCTCTTGTTTCTAGAA+AGG + chr3_3:72942495-72942514 Msa0470730:CDS 40.0%
! TGGCCTTTCTAGAAACAAGA+GGG - chr3_3:72942501-72942520 None:intergenic 40.0%
! TTGGCCTTTCTAGAAACAAG+AGG - chr3_3:72942502-72942521 None:intergenic 40.0%
AAGGCCAAAGATCTGATAAG+TGG + chr3_3:72942514-72942533 Msa0470730:CDS 40.0%
AGGCCAAAGATCTGATAAGT+GGG + chr3_3:72942515-72942534 Msa0470730:CDS 40.0%
TACCCCACTTATCAGATCTT+TGG - chr3_3:72942521-72942540 None:intergenic 40.0%
GCTTTCACTTCAGGAGATAA+TGG + chr3_3:72942664-72942683 Msa0470730:intron 40.0%
GGTGAATCGCACAAAAGAGA+GGG - chr3_3:72940656-72940675 None:intergenic 45.0%
TTCGAAATCGGAAAGCCACT+CGG + chr3_3:72940770-72940789 Msa0470730:CDS 45.0%
CAAACAACTTGGGAGGGAAA+TGG + chr3_3:72941153-72941172 Msa0470730:CDS 45.0%
CCATAGAGACGCAAGATGTT+TGG - chr3_3:72941202-72941221 None:intergenic 45.0%
CCAAACATCTTGCGTCTCTA+TGG + chr3_3:72941199-72941218 Msa0470730:CDS 45.0%
ACATCTTGCGTCTCTATGGT+TGG + chr3_3:72941203-72941222 Msa0470730:CDS 45.0%
CAGAGAAATGACCTCTTTCG+CGG - chr3_3:72941297-72941316 None:intergenic 45.0%
! CTCTGAGAAACAAGCTGCAA+CGG + chr3_3:72941312-72941331 Msa0470730:CDS 45.0%
GTTGTGCATGTTTGGTTGAG+CGG + chr3_3:72941939-72941958 Msa0470730:intron 45.0%
!! GCAGTTGATAACTGGACTCT+AGG + chr3_3:72942279-72942298 Msa0470730:CDS 45.0%
TCTTGACTTTCAGCCTCGAA+CGG - chr3_3:72942339-72942358 None:intergenic 45.0%
! TAGAAACAAGAGGGGTACGA+GGG - chr3_3:72942492-72942511 None:intergenic 45.0%
! GGCCTTTCTAGAAACAAGAG+GGG - chr3_3:72942500-72942519 None:intergenic 45.0%
GGCCAAAGATCTGATAAGTG+GGG + chr3_3:72942516-72942535 Msa0470730:CDS 45.0%
!! AGGAGATAATGGAGCATCCT+TGG + chr3_3:72942675-72942694 Msa0470730:intron 45.0%
GGTGAATCGCACAAAAGAGA+GGG - chr3_3:72940656-72940675 None:intergenic 45.0%
TTCGAAATCGGAAAGCCACT+CGG + chr3_3:72940770-72940789 Msa0470730:CDS 45.0%
CAAACAACTTGGGAGGGAAA+TGG + chr3_3:72941153-72941172 Msa0470730:CDS 45.0%
CCATAGAGACGCAAGATGTT+TGG - chr3_3:72941202-72941221 None:intergenic 45.0%
CCAAACATCTTGCGTCTCTA+TGG + chr3_3:72941199-72941218 Msa0470730:CDS 45.0%
ACATCTTGCGTCTCTATGGT+TGG + chr3_3:72941203-72941222 Msa0470730:CDS 45.0%
CAGAGAAATGACCTCTTTCG+CGG - chr3_3:72941297-72941316 None:intergenic 45.0%
! CTCTGAGAAACAAGCTGCAA+CGG + chr3_3:72941312-72941331 Msa0470730:CDS 45.0%
GTTGTGCATGTTTGGTTGAG+CGG + chr3_3:72941939-72941958 Msa0470730:intron 45.0%
!! GCAGTTGATAACTGGACTCT+AGG + chr3_3:72942279-72942298 Msa0470730:CDS 45.0%
TCTTGACTTTCAGCCTCGAA+CGG - chr3_3:72942339-72942358 None:intergenic 45.0%
! TAGAAACAAGAGGGGTACGA+GGG - chr3_3:72942492-72942511 None:intergenic 45.0%
! GGCCTTTCTAGAAACAAGAG+GGG - chr3_3:72942500-72942519 None:intergenic 45.0%
GGCCAAAGATCTGATAAGTG+GGG + chr3_3:72942516-72942535 Msa0470730:CDS 45.0%
!! AGGAGATAATGGAGCATCCT+TGG + chr3_3:72942675-72942694 Msa0470730:intron 45.0%
GGGTGAATCGCACAAAAGAG+AGG - chr3_3:72940657-72940676 None:intergenic 50.0%
TCGAAATCGGAAAGCCACTC+GGG + chr3_3:72940771-72940790 Msa0470730:CDS 50.0%
TACATGTTGCTCCGCGAAAG+AGG + chr3_3:72941283-72941302 Msa0470730:CDS 50.0%
TGCCCTTCCATACCTTCTGA+AGG - chr3_3:72942367-72942386 None:intergenic 50.0%
! CTAGAAACAAGAGGGGTACG+AGG - chr3_3:72942493-72942512 None:intergenic 50.0%
GGGTGAATCGCACAAAAGAG+AGG - chr3_3:72940657-72940676 None:intergenic 50.0%
TCGAAATCGGAAAGCCACTC+GGG + chr3_3:72940771-72940790 Msa0470730:CDS 50.0%
TACATGTTGCTCCGCGAAAG+AGG + chr3_3:72941283-72941302 Msa0470730:CDS 50.0%
TGCCCTTCCATACCTTCTGA+AGG - chr3_3:72942367-72942386 None:intergenic 50.0%
! CTAGAAACAAGAGGGGTACG+AGG - chr3_3:72942493-72942512 None:intergenic 50.0%
CCACTCGGGAGAGGCAAATT+CGG + chr3_3:72940785-72940804 Msa0470730:CDS 55.0%
CGAACGGAGGAACACCATAG+AGG - chr3_3:72942323-72942342 None:intergenic 55.0%
CTATGGTGTTCCTCCGTTCG+AGG + chr3_3:72942323-72942342 Msa0470730:CDS 55.0%
TGACTTTCAGCCTCGAACGG+AGG - chr3_3:72942336-72942355 None:intergenic 55.0%
CCACTCGGGAGAGGCAAATT+CGG + chr3_3:72940785-72940804 Msa0470730:CDS 55.0%
CGAACGGAGGAACACCATAG+AGG - chr3_3:72942323-72942342 None:intergenic 55.0%
CTATGGTGTTCCTCCGTTCG+AGG + chr3_3:72942323-72942342 Msa0470730:CDS 55.0%
TGACTTTCAGCCTCGAACGG+AGG - chr3_3:72942336-72942355 None:intergenic 55.0%
ATCGGAAAGCCACTCGGGAG+AGG + chr3_3:72940776-72940795 Msa0470730:CDS 60.0%
CCGAATTTGCCTCTCCCGAG+TGG - chr3_3:72940788-72940807 None:intergenic 60.0%
ATCGGAAAGCCACTCGGGAG+AGG + chr3_3:72940776-72940795 Msa0470730:CDS 60.0%
CCGAATTTGCCTCTCCCGAG+TGG - chr3_3:72940788-72940807 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 72940603 72942736 72940603 ID=Msa0470730;Name=Msa0470730
chr3_3 mRNA 72940603 72942736 72940603 ID=Msa0470730-mRNA-1;Parent=Msa0470730;Name=Msa0470730-mRNA-1;_AED=0.25;_eAED=0.25;_QI=128|0.25|0.6|1|1|1|5|0|234
chr3_3 exon 72940603 72940835 72940603 ID=Msa0470730-mRNA-1:exon:18372;Parent=Msa0470730-mRNA-1
chr3_3 exon 72941091 72941333 72941091 ID=Msa0470730-mRNA-1:exon:18373;Parent=Msa0470730-mRNA-1
chr3_3 exon 72942150 72942373 72942150 ID=Msa0470730-mRNA-1:exon:18374;Parent=Msa0470730-mRNA-1
chr3_3 exon 72942465 72942537 72942465 ID=Msa0470730-mRNA-1:exon:18375;Parent=Msa0470730-mRNA-1
chr3_3 exon 72942677 72942736 72942677 ID=Msa0470730-mRNA-1:exon:18376;Parent=Msa0470730-mRNA-1
chr3_3 five_prime_UTR 72940603 72940730 72940603 ID=Msa0470730-mRNA-1:five_prime_utr;Parent=Msa0470730-mRNA-1
chr3_3 CDS 72940731 72940835 72940731 ID=Msa0470730-mRNA-1:cds;Parent=Msa0470730-mRNA-1
chr3_3 CDS 72941091 72941333 72941091 ID=Msa0470730-mRNA-1:cds;Parent=Msa0470730-mRNA-1
chr3_3 CDS 72942150 72942373 72942150 ID=Msa0470730-mRNA-1:cds;Parent=Msa0470730-mRNA-1
chr3_3 CDS 72942465 72942537 72942465 ID=Msa0470730-mRNA-1:cds;Parent=Msa0470730-mRNA-1
chr3_3 CDS 72942677 72942736 72942677 ID=Msa0470730-mRNA-1:cds;Parent=Msa0470730-mRNA-1
Gene Sequence

>Msa0470730

ATGGATCAAAATCAGAAACGGGATTGGTCTATCAACGACTTCGAAATCGGAAAGCCACTCGGGAGAGGCAAATTCGGCAGAGTCTATGTCGCCAGAGAAATTAAGAGTAAATATGTGGTTGCATTGAAGGTTATCTTTAAGGAACAACTAGAGAAGTATCAACTTCACAAACAACTTGGGAGGGAAATGGAGATACAGATAAGTCTTAAACATCCAAACATCTTGCGTCTCTATGGTTGGTTTCATGATTCGGAGCGTGTTTACTTGATTCTTGAATATGCTCATAATGGTGAGCTATACATGTTGCTCCGCGAAAGAGGTCATTTCTCTGAGAAACAAGCTGCAACGGGTCGTCTAAAGATTGCAGACTTTGGTTGGTCTGTACAATCTGAAGACAAAGACAAAAAGAGAAAAACCATGTGTGGAACATTGGATTATTTAGCTCCTGAAATGGTAGAAAATAAAGGTCATGATTATGCAGTTGATAACTGGACTCTAGGTATCCTTTGTTATGAATTCCTCTATGGTGTTCCTCCGTTCGAGGCTGAAAGTCAAGATGATACCTTCAGAAGGATAGTGAAGATTGATCTGAGCTTCCCTCGTACCCCTCTTGTTTCTAGAAAGGCCAAAGATCTGATAAGTGGGGAGATAATGGAGCATCCTTGGATAAAAGAGAATGCAAATCATACTGGTGTCTGCAAGTAG

Protein sequence

>Msa0470730

MDQNQKRDWSINDFEIGKPLGRGKFGRVYVAREIKSKYVVALKVIFKEQLEKYQLHKQLGREMEIQISLKHPNILRLYGWFHDSERVYLILEYAHNGELYMLLRERGHFSEKQAATGRLKIADFGWSVQSEDKDKKRKTMCGTLDYLAPEMVENKGHDYAVDNWTLGILCYEFLYGVPPFEAESQDDTFRRIVKIDLSFPRTPLVSRKAKDLISGEIMEHPWIKENANHTGVCK*