AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0476030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476030 MtrunA17_Chr3g0134481 91.848 184 15 0 1 184 1 184 4.52e-118 332
Msa0476030 MtrunA17_Chr3g0134461 70.769 195 46 2 1 184 1 195 1.54e-85 250
Msa0476030 MtrunA17_Chr3g0137101 83.459 133 22 0 1 133 1 133 9.95e-74 233
Msa0476030 MtrunA17_Chr3g0137101 75.000 48 12 0 134 181 200 247 1.88e-19 85.1
Msa0476030 MtrunA17_Chr2g0294911 43.830 235 74 3 5 181 26 260 3.06e-60 197
Msa0476030 MtrunA17_Chr3g0123131 44.492 236 69 2 8 181 13 248 6.83e-60 195
Msa0476030 MtrunA17_Chr8g0376881 44.915 236 70 2 6 181 23 258 2.65e-59 193
Msa0476030 MtrunA17_Chr2g0304841 67.424 132 43 0 2 133 12 143 1.46e-58 194
Msa0476030 MtrunA17_Chr2g0304841 68.750 48 15 0 134 181 215 262 2.23e-16 76.3
Msa0476030 MtrunA17_Chr1g0149841 68.992 129 40 0 5 133 2 130 7.37e-57 186
Msa0476030 MtrunA17_Chr1g0149841 84.783 46 7 0 136 181 195 240 5.00e-19 83.6
Msa0476030 MtrunA17_Chr1g0149851 65.891 129 44 0 5 133 2 130 1.29e-53 178
Msa0476030 MtrunA17_Chr1g0149851 52.459 61 14 1 136 181 195 255 7.49e-11 60.1
Msa0476030 MtrunA17_Chr7g0275891 65.385 130 44 1 5 133 2 131 9.18e-53 171
Msa0476030 MtrunA17_Chr7g0275891 52.381 63 17 1 132 181 191 253 2.81e-13 67.0
Msa0476030 MtrunA17_Chr4g0067981 57.143 133 57 0 3 135 26 158 7.66e-51 173
Msa0476030 MtrunA17_Chr4g0067981 70.833 48 14 0 134 181 217 264 7.45e-17 77.4
Msa0476030 MtrunA17_Chr7g0275401 51.462 171 79 1 5 175 2 168 9.11e-50 162
Msa0476030 MtrunA17_Chr7g0275401 64.000 50 18 0 132 181 192 241 1.74e-15 72.8
Msa0476030 MtrunA17_Chr4g0074411 60.938 128 50 0 2 129 12 139 6.92e-49 167
Msa0476030 MtrunA17_Chr4g0074411 68.750 48 15 0 134 181 203 250 2.72e-15 73.2
Msa0476030 MtrunA17_Chr4g0074401 63.934 122 44 0 8 129 17 138 1.48e-47 163
Msa0476030 MtrunA17_Chr4g0074401 66.667 48 16 0 134 181 205 252 1.35e-14 70.9
Msa0476030 MtrunA17_Chr1g0161431 59.524 126 51 0 4 129 7 132 1.11e-44 155
Msa0476030 MtrunA17_Chr1g0161431 68.750 48 15 0 134 181 202 249 1.36e-16 76.6
Msa0476030 MtrunA17_Chr4g0009851 36.449 214 100 3 3 181 6 218 3.01e-40 138
Msa0476030 MtrunA17_Chr4g0009901 35.407 209 99 3 8 181 10 217 3.54e-36 127
Msa0476030 MtrunA17_Chr6g0471041 34.434 212 103 4 7 183 13 223 6.27e-33 121
Msa0476030 MtrunA17_Chr4g0074421 68.493 73 23 0 57 129 1 73 1.47e-30 110
Msa0476030 MtrunA17_Chr4g0074421 66.667 48 16 0 134 181 135 182 2.50e-16 73.2
Msa0476030 MtrunA17_Chr4g0009981 34.756 164 72 1 53 181 2 165 3.43e-29 108
Msa0476030 MtrunA17_Chr1g0149831 70.149 67 20 0 67 133 1 67 3.68e-27 102
Msa0476030 MtrunA17_Chr1g0149831 73.913 46 9 1 136 181 132 174 1.07e-14 69.7
Msa0476030 MtrunA17_Chr1g0181811 38.843 121 71 2 12 129 85 205 6.47e-22 92.0
Msa0476030 MtrunA17_Chr4g0030271 40.496 121 69 1 12 129 89 209 1.10e-21 91.7
Msa0476030 MtrunA17_Chr3g0127941 37.302 126 74 2 12 133 56 180 3.66e-21 90.1
Msa0476030 MtrunA17_Chr7g0276361 36.806 144 79 4 1 135 1 141 6.52e-21 89.4
Msa0476030 MtrunA17_Chr8g0383961 34.559 136 84 1 7 142 13 143 1.38e-20 85.9
Msa0476030 MtrunA17_Chr8g0345901 39.496 119 69 1 14 129 38 156 3.95e-20 87.0
Msa0476030 MtrunA17_Chr6g0456631 33.333 126 81 3 6 129 7 131 2.58e-19 80.5
Msa0476030 MtrunA17_Chr8g0391911 34.146 123 79 2 8 129 9 130 3.33e-19 82.0
Msa0476030 MtrunA17_Chr4g0009991 37.815 119 40 2 100 184 1 119 4.48e-18 76.3
Msa0476030 MtrunA17_Chr4g0061021 33.884 121 77 1 12 129 33 153 5.65e-18 80.9
Msa0476030 MtrunA17_Chr3g0091641 33.058 121 78 1 12 129 24 144 4.97e-17 78.2
Msa0476030 MtrunA17_Chr8g0350761 32.609 138 84 3 11 139 20 157 2.94e-16 75.9
Msa0476030 MtrunA17_Chr5g0400241 39.024 123 69 3 8 128 14 132 8.04e-16 74.7
Msa0476030 MtrunA17_Chr5g0400241 60.000 45 18 0 137 181 316 360 4.19e-13 66.6
Msa0476030 MtrunA17_Chr6g0473731 30.370 135 53 2 88 181 10 144 3.53e-15 72.4
Msa0476030 MtrunA17_Chr4g0040481 60.000 45 18 0 137 181 163 207 1.12e-13 68.2
Msa0476030 MtrunA17_Chr4g0031961 46.377 69 33 1 117 181 112 180 1.50e-13 67.4
Msa0476030 MtrunA17_Chr2g0324891 60.000 45 18 0 137 181 166 210 2.76e-13 67.0
Msa0476030 MtrunA17_Chr4g0054981 34.426 122 76 2 8 128 14 132 2.93e-13 67.0
Msa0476030 MtrunA17_Chr4g0054981 57.447 47 20 0 137 183 315 361 9.87e-13 65.5
Msa0476030 MtrunA17_Chr7g0255711 54.167 48 22 0 134 181 93 140 5.43e-12 62.8
Msa0476030 MtrunA17_Chr8g0352871 26.786 168 98 5 14 160 11 174 5.91e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476030 AT4G31920.1 52.679 224 60 1 6 183 11 234 1.62e-73 231
Msa0476030 AT5G58080.1 48.523 237 64 3 2 181 8 243 4.17e-58 192
Msa0476030 AT2G25180.1 67.969 128 41 0 3 130 8 135 5.74e-58 191
Msa0476030 AT2G25180.1 66.000 50 17 0 132 181 195 244 9.14e-17 77.8
Msa0476030 AT1G67710.1 43.697 238 67 5 9 181 8 243 2.58e-52 175
Msa0476030 AT3G16857.1 54.167 144 64 1 8 151 33 174 1.69e-48 167
Msa0476030 AT3G16857.1 76.087 46 11 0 136 181 241 286 6.04e-17 78.2
Msa0476030 AT3G16857.2 54.167 144 64 1 8 151 33 174 2.06e-48 167
Msa0476030 AT3G16857.2 76.087 46 11 0 136 181 241 286 6.14e-17 78.2
Msa0476030 AT2G01760.1 56.349 126 54 1 5 129 4 129 2.55e-42 145
Msa0476030 AT2G01760.1 63.462 52 19 0 132 183 200 251 5.54e-17 77.8
Msa0476030 AT2G01760.2 46.104 154 54 2 5 129 4 157 2.20e-36 130
Msa0476030 AT2G01760.2 63.462 52 19 0 132 183 228 279 6.57e-17 77.8
Msa0476030 AT3G16857.3 56.190 105 44 1 47 151 2 104 1.32e-34 128
Msa0476030 AT3G16857.3 76.087 46 11 0 136 181 171 216 5.94e-17 78.2
Msa0476030 AT1G67710.2 42.222 180 37 5 67 181 1 178 2.55e-31 118
Msa0476030 AT5G49240.1 30.705 241 106 3 5 184 35 275 3.37e-29 109
Msa0476030 AT1G49190.1 38.211 123 76 0 7 129 29 151 2.60e-23 95.9
Msa0476030 AT1G49190.2 38.211 123 76 0 7 129 29 151 2.26e-22 94.0
Msa0476030 AT5G24470.1 37.063 143 79 4 6 138 42 183 4.45e-22 92.8
Msa0476030 AT2G01760.3 64.062 64 22 1 67 129 1 64 2.87e-21 89.0
Msa0476030 AT2G01760.3 63.462 52 19 0 132 183 135 186 3.72e-17 77.8
Msa0476030 AT5G60100.2 38.400 125 74 1 12 133 64 188 4.53e-21 90.1
Msa0476030 AT5G60100.7 38.843 121 71 1 12 129 64 184 5.25e-21 89.4
Msa0476030 AT5G60100.6 38.843 121 71 1 12 129 64 184 5.25e-21 89.4
Msa0476030 AT5G60100.4 38.843 121 71 1 12 129 64 184 5.25e-21 89.4
Msa0476030 AT5G02810.1 38.710 124 73 1 12 132 78 201 5.85e-21 89.7
Msa0476030 AT5G60100.5 38.843 121 71 1 12 129 64 184 1.03e-20 89.0
Msa0476030 AT5G60100.3 38.843 121 71 1 12 129 64 184 1.03e-20 89.0
Msa0476030 AT5G60100.1 38.843 121 71 1 12 129 64 184 1.03e-20 89.0
Msa0476030 AT2G46790.3 37.705 122 71 2 12 129 37 157 1.51e-20 88.2
Msa0476030 AT2G46790.1 37.705 122 71 2 12 129 37 157 1.67e-20 88.2
Msa0476030 AT3G62670.1 41.748 103 60 0 27 129 54 156 6.69e-20 86.3
Msa0476030 AT1G67710.3 35.625 160 36 5 87 181 12 169 3.61e-18 81.6
Msa0476030 AT5G61380.1 34.711 121 76 1 12 129 19 139 1.08e-17 80.5
Msa0476030 AT5G44190.2 68.889 45 14 0 137 181 152 196 4.97e-15 72.4
Msa0476030 AT5G44190.1 68.889 45 14 0 137 181 152 196 5.22e-15 72.4
Msa0476030 AT2G20570.1 68.889 45 14 0 137 181 158 202 3.49e-14 70.1
Msa0476030 AT2G20570.2 68.889 45 14 0 137 181 174 218 4.14e-14 69.7
Msa0476030 AT2G40970.1 56.250 48 21 0 134 181 107 154 3.96e-13 65.9
Msa0476030 AT4G18020.8 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.8 59.574 47 19 0 137 183 301 347 9.94e-13 65.9
Msa0476030 AT4G18020.11 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.11 59.574 47 19 0 137 183 301 347 9.94e-13 65.9
Msa0476030 AT4G18020.4 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.4 59.574 47 19 0 137 183 301 347 9.94e-13 65.9
Msa0476030 AT4G18020.5 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.5 59.574 47 19 0 137 183 301 347 9.94e-13 65.9
Msa0476030 AT4G18020.10 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.10 59.574 47 19 0 137 183 301 347 9.94e-13 65.9
Msa0476030 AT4G18020.7 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.7 59.574 47 19 0 137 183 301 347 9.94e-13 65.9
Msa0476030 AT4G18020.3 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.3 50.909 55 27 0 129 183 293 347 8.86e-13 66.2
Msa0476030 AT4G18020.2 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.2 50.909 55 27 0 129 183 293 347 8.86e-13 66.2
Msa0476030 AT4G18020.1 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.1 50.909 55 27 0 129 183 293 347 8.86e-13 66.2
Msa0476030 AT4G18020.6 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.6 50.909 55 27 0 129 183 293 347 8.86e-13 66.2
Msa0476030 AT4G18020.9 35.385 130 75 3 6 128 12 139 6.28e-13 66.6
Msa0476030 AT4G18020.9 50.909 55 27 0 129 183 293 347 8.86e-13 66.2
Msa0476030 AT5G59570.2 56.250 48 21 0 134 181 143 190 1.13e-12 65.1
Msa0476030 AT5G59570.1 56.250 48 21 0 134 181 143 190 1.13e-12 65.1
Msa0476030 AT3G46640.2 56.250 48 21 0 134 181 146 193 1.64e-12 65.1
Msa0476030 AT3G46640.1 56.250 48 21 0 134 181 146 193 1.64e-12 65.1
Msa0476030 AT3G46640.3 56.250 48 21 0 134 181 146 193 1.73e-12 64.7
Msa0476030 AT5G07210.2 31.667 120 79 2 12 130 16 133 3.66e-12 64.3
Msa0476030 AT5G05090.1 54.167 48 22 0 134 181 83 130 4.48e-12 63.2
Msa0476030 AT3G10760.1 56.522 46 20 0 136 181 109 154 4.79e-12 63.5

Find 86 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCCTTCTCTCTTGCTTT+TGG 0.208333 3_3:+79747902 Msa0476030:CDS
CAAAAGCTTGGAACCTAATA+AGG 0.257363 3_3:-79749143 None:intergenic
AAGGTCTTCAATATTATTTA+TGG 0.259242 3_3:-79749227 None:intergenic
GTCCCAGTTTGTTTGGTCTA+TGG 0.314039 3_3:+79748608 Msa0476030:CDS
CTGAAAAGAATGGATGGTTC+TGG 0.324289 3_3:+79748939 Msa0476030:three_prime_UTR
AAACGGGCTATATTTAGATT+TGG 0.324315 3_3:-79749292 None:intergenic
CTTGAAGCTGTTAATCAGTT+AGG 0.332985 3_3:+79748648 Msa0476030:CDS
GCCATGAGCATGTCCTTATT+AGG 0.333265 3_3:+79749130 Msa0476030:three_prime_UTR
GGAACTTGTGGGACTTGAAA+TGG 0.353940 3_3:+79748315 Msa0476030:CDS
TAAAAGAGCATTCTAATTTG+TGG 0.383501 3_3:-79749176 None:intergenic
AATGTTTCTGGTTTATGAAA+TGG 0.388291 3_3:+79748895 Msa0476030:three_prime_UTR
TCTGCTGAAACCTGTGAGAT+TGG 0.389884 3_3:+79748542 Msa0476030:CDS
TGGAGGAGCTAAGGAACATT+TGG 0.390210 3_3:+79748562 Msa0476030:CDS
GTTCCATAGACCAAACAAAC+TGG 0.396655 3_3:-79748611 None:intergenic
CCGGAGTATATTCTGATTAA+CGG 0.398230 3_3:-79749043 None:intergenic
ATACGGAGTCCCAGTTTGTT+TGG 0.408262 3_3:+79748601 Msa0476030:CDS
TCATAGAGAAGAGAGAATAA+TGG 0.408539 3_3:+79747824 Msa0476030:exon
ATTCTGATTAACGGGAGTTA+TGG 0.411464 3_3:-79749034 None:intergenic
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3_3:+79748471 Msa0476030:intron
AACTATCCCACTGGGTGAAA+AGG 0.434436 3_3:-79748988 None:intergenic
ACATTTGGCAGCATGTAATT+CGG 0.438242 3_3:+79748577 Msa0476030:CDS
GGAAGAAAATTGCAAAAGCT+TGG 0.440478 3_3:-79749155 None:intergenic
CGGAGTATATTCTGATTAAC+GGG 0.444913 3_3:-79749042 None:intergenic
GGTAATCTGAACGGGCAGTT+TGG 0.455986 3_3:+79749011 Msa0476030:three_prime_UTR
GCAGCATGTAATTCGGAATA+CGG 0.461939 3_3:+79748584 Msa0476030:CDS
AGCTTAAGTCCATCCATGTC+AGG 0.462326 3_3:-79748289 None:intergenic
CGGGCTATATTTAGATTTGG+AGG 0.465101 3_3:-79749289 None:intergenic
TTGCAAGTGATCAAACCATA+TGG 0.480135 3_3:-79749079 None:intergenic
GGACGTGGCGACCCATCTCC+AGG 0.480850 3_3:+79748817 Msa0476030:CDS
CACAACTAGTAATGTAATAA+CGG 0.482381 3_3:+79748204 Msa0476030:CDS
TAGACTCTTTCTGAAAAGAA+TGG 0.483472 3_3:+79748929 Msa0476030:three_prime_UTR
GGATAGTTGGTAATCTGAAC+GGG 0.486215 3_3:+79749003 Msa0476030:three_prime_UTR
CGTTAATCAGAATATACTCC+GGG 0.488840 3_3:+79749044 Msa0476030:three_prime_UTR
ACTAGAAAAGTGCCTGGAGA+TGG 0.493120 3_3:-79748829 None:intergenic
CGTTATTACATTACTAGTTG+TGG 0.495202 3_3:-79748203 None:intergenic
CTTAGCTCCTCCAATCTCAC+AGG 0.496928 3_3:-79748552 None:intergenic
CAGAAAATCACGGGCACCGT+GGG 0.504818 3_3:-79748523 None:intergenic
CAGATTACCAACTATCCCAC+TGG 0.509046 3_3:-79748997 None:intergenic
GGGGAATGCCAATGTCCATA+TGG 0.518747 3_3:+79749064 Msa0476030:three_prime_UTR
TAGAGGACTAGAAAAGTGCC+TGG 0.518904 3_3:-79748835 None:intergenic
TGTGAACTTCAGCGATTACC+AGG 0.522457 3_3:-79748264 None:intergenic
CTAGAAAAGTGCCTGGAGAT+GGG 0.532146 3_3:-79748828 None:intergenic
TCCAAAAGCAAGAGAGAAGG+AGG 0.535506 3_3:-79747903 None:intergenic
CTTAAGCTGCTGGAACTTGT+GGG 0.537675 3_3:+79748304 Msa0476030:CDS
CTGTGAGATTGGAGGAGCTA+AGG 0.543793 3_3:+79748553 Msa0476030:CDS
TCCACTGATCGGTTTCCCAT+CGG 0.547632 3_3:+79747852 Msa0476030:CDS
CTCTTTCTGAAAAGAATGGA+TGG 0.549493 3_3:+79748933 Msa0476030:three_prime_UTR
ATTTAGATTTGGAGGGAGCA+AGG 0.549979 3_3:-79749281 None:intergenic
AGCGAGAACACGCATTCCGA+TGG 0.550357 3_3:-79747868 None:intergenic
ACTTAAGCTGCTGGAACTTG+TGG 0.552160 3_3:+79748303 Msa0476030:CDS
GCTGAAACCTGTGAGATTGG+AGG 0.556603 3_3:+79748545 Msa0476030:CDS
TGCATATGGTGATACGGAGC+TGG 0.563561 3_3:+79748485 Msa0476030:CDS
CATGGATGGACTTAAGCTGC+TGG 0.564074 3_3:+79748294 Msa0476030:CDS
GGGCTATATTTAGATTTGGA+GGG 0.573291 3_3:-79749288 None:intergenic
ATAAGGACATGCTCATGGCT+AGG 0.576667 3_3:-79749126 None:intergenic
ACCTAATAAGGACATGCTCA+TGG 0.580944 3_3:-79749131 None:intergenic
ATATGGACATTGGCATTCCC+CGG 0.581104 3_3:-79749062 None:intergenic
GGGATAGTTGGTAATCTGAA+CGG 0.584367 3_3:+79749002 Msa0476030:three_prime_UTR
GACCGTGGTATTGACATGAT+CGG 0.585397 3_3:-79747935 None:intergenic
CAGGTTTCAGCAGAAAATCA+CGG 0.587467 3_3:-79748533 None:intergenic
GTTTCCAAAAGCAAGAGAGA+AGG 0.592241 3_3:-79747906 None:intergenic
TAATGGATGATTCCACTGAT+CGG 0.598611 3_3:+79747841 Msa0476030:exon
GTTGTCTGCATATGGTGATA+CGG 0.598779 3_3:+79748479 Msa0476030:CDS
TGATACGGAGCTGGTGATGA+AGG 0.599556 3_3:+79748494 Msa0476030:CDS
TCCGATGGGAAACCGATCAG+TGG 0.602032 3_3:-79747853 None:intergenic
TGATCAAACCATATGGACAT+TGG 0.603338 3_3:-79749072 None:intergenic
AAATCTTACAAGAGAGGACG+TGG 0.604587 3_3:+79748802 Msa0476030:CDS
CCGTTAATCAGAATATACTC+CGG 0.605300 3_3:+79749043 Msa0476030:three_prime_UTR
AGGTTTCAGCAGAAAATCAC+GGG 0.606322 3_3:-79748532 None:intergenic
TGATCACTTGCAAAACAGCA+AGG 0.610848 3_3:+79749089 Msa0476030:three_prime_UTR
CCCACTTACTTATGACAGGA+AGG 0.611035 3_3:-79748339 None:intergenic
TTCCATAGACCAAACAAACT+GGG 0.611190 3_3:-79748610 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.611220 3_3:-79747867 None:intergenic
GTTCACATGCCTGACATGGA+TGG 0.616361 3_3:+79748280 Msa0476030:CDS
TAACAGCTTCAAGAAACTTG+CGG 0.617068 3_3:-79748638 None:intergenic
TGTTGAAAATCTTACAAGAG+AGG 0.626999 3_3:+79748796 Msa0476030:CDS
TGAAGTTCACATGCCTGACA+TGG 0.628648 3_3:+79748276 Msa0476030:CDS
TTGTATAAATTAAAGCGTAG+AGG 0.654254 3_3:-79748852 None:intergenic
GTGATGAAGGCAATTTCCCA+CGG 0.657007 3_3:+79748507 Msa0476030:CDS
AAACATAGACATGTTTGACC+TGG 0.663608 3_3:+79748246 Msa0476030:CDS
GTAAATATTAAAACAGAACA+AGG 0.664926 3_3:-79749246 None:intergenic
CGTGGTATTGACATGATCGG+AGG 0.677686 3_3:-79747932 None:intergenic
GCAGAAAATCACGGGCACCG+TGG 0.679138 3_3:-79748524 None:intergenic
CTCCGATCATGTCAATACCA+CGG 0.680497 3_3:+79747933 Msa0476030:CDS
AGATTACCAACTATCCCACT+GGG 0.681347 3_3:-79748996 None:intergenic
GTTAATCAGAATATACTCCG+GGG 0.763532 3_3:+79749045 Msa0476030:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAATATTATACACATAAAT+TGG - chr3_3:79747985-79748004 None:intergenic 15.0%
!! GTACAAAGTATAATAAAAAT+TGG - chr3_3:79748032-79748051 None:intergenic 15.0%
!!! ATATCTCTCTTATTTATTTA+TGG + chr3_3:79748164-79748183 Msa0476030:intron 15.0%
!!! ATCAATTCAAAAATCTTTTT+GGG - chr3_3:79748773-79748792 None:intergenic 15.0%
!! GTAATATTATACACATAAAT+TGG - chr3_3:79747985-79748004 None:intergenic 15.0%
!! GTACAAAGTATAATAAAAAT+TGG - chr3_3:79748032-79748051 None:intergenic 15.0%
!!! ATATCTCTCTTATTTATTTA+TGG + chr3_3:79748164-79748183 Msa0476030:intron 15.0%
!!! ATCAATTCAAAAATCTTTTT+GGG - chr3_3:79748773-79748792 None:intergenic 15.0%
!!! TCTCTTATTTATTTATGGTT+GGG + chr3_3:79748169-79748188 Msa0476030:intron 20.0%
!!! CATCAATTCAAAAATCTTTT+TGG - chr3_3:79748774-79748793 None:intergenic 20.0%
!! AAGGTCTTCAATATTATTTA+TGG - chr3_3:79749230-79749249 None:intergenic 20.0%
!! GTAAATATTAAAACAGAACA+AGG - chr3_3:79749249-79749268 None:intergenic 20.0%
!!! TCTCTTATTTATTTATGGTT+GGG + chr3_3:79748169-79748188 Msa0476030:intron 20.0%
!!! CATCAATTCAAAAATCTTTT+TGG - chr3_3:79748774-79748793 None:intergenic 20.0%
!! AAGGTCTTCAATATTATTTA+TGG - chr3_3:79749230-79749249 None:intergenic 20.0%
!! GTAAATATTAAAACAGAACA+AGG - chr3_3:79749249-79749268 None:intergenic 20.0%
!! CTCTCTTATTTATTTATGGT+TGG + chr3_3:79748168-79748187 Msa0476030:intron 25.0%
!! CTCTTATTTATTTATGGTTG+GGG + chr3_3:79748170-79748189 Msa0476030:intron 25.0%
! CACAACTAGTAATGTAATAA+CGG + chr3_3:79748204-79748223 Msa0476030:CDS 25.0%
!!! TCATGTTAATGTTGTTTTAC+TGG + chr3_3:79748736-79748755 Msa0476030:intron 25.0%
! TTGTATAAATTAAAGCGTAG+AGG - chr3_3:79748855-79748874 None:intergenic 25.0%
!!! AATGTTTCTGGTTTATGAAA+TGG + chr3_3:79748895-79748914 Msa0476030:three_prime_UTR 25.0%
!!! TAAAAGAGCATTCTAATTTG+TGG - chr3_3:79749179-79749198 None:intergenic 25.0%
!! CTCTCTTATTTATTTATGGT+TGG + chr3_3:79748168-79748187 Msa0476030:intron 25.0%
!! CTCTTATTTATTTATGGTTG+GGG + chr3_3:79748170-79748189 Msa0476030:intron 25.0%
! CACAACTAGTAATGTAATAA+CGG + chr3_3:79748204-79748223 Msa0476030:CDS 25.0%
!!! TCATGTTAATGTTGTTTTAC+TGG + chr3_3:79748736-79748755 Msa0476030:intron 25.0%
! TTGTATAAATTAAAGCGTAG+AGG - chr3_3:79748855-79748874 None:intergenic 25.0%
!!! AATGTTTCTGGTTTATGAAA+TGG + chr3_3:79748895-79748914 Msa0476030:three_prime_UTR 25.0%
!!! TAAAAGAGCATTCTAATTTG+TGG - chr3_3:79749179-79749198 None:intergenic 25.0%
TCATAGAGAAGAGAGAATAA+TGG + chr3_3:79747824-79747843 Msa0476030:exon 30.0%
!! TCAGAATCTCTATTTCTACA+TGG + chr3_3:79748069-79748088 Msa0476030:intron 30.0%
AAAGTACACTTTGAATGACA+AGG - chr3_3:79748130-79748149 None:intergenic 30.0%
CGTTATTACATTACTAGTTG+TGG - chr3_3:79748206-79748225 None:intergenic 30.0%
TGTTGAAAATCTTACAAGAG+AGG + chr3_3:79748796-79748815 Msa0476030:CDS 30.0%
!!! ATTTTTTCGCTGAATGTTTC+TGG + chr3_3:79748883-79748902 Msa0476030:three_prime_UTR 30.0%
! TAGACTCTTTCTGAAAAGAA+TGG + chr3_3:79748929-79748948 Msa0476030:three_prime_UTR 30.0%
! AATGCTCTTTTATGTATGAG+AGG + chr3_3:79749187-79749206 Msa0476030:three_prime_UTR 30.0%
! ATGCTCTTTTATGTATGAGA+GGG + chr3_3:79749188-79749207 Msa0476030:three_prime_UTR 30.0%
TCATAGAGAAGAGAGAATAA+TGG + chr3_3:79747824-79747843 Msa0476030:exon 30.0%
!! TCAGAATCTCTATTTCTACA+TGG + chr3_3:79748069-79748088 Msa0476030:intron 30.0%
AAAGTACACTTTGAATGACA+AGG - chr3_3:79748130-79748149 None:intergenic 30.0%
CGTTATTACATTACTAGTTG+TGG - chr3_3:79748206-79748225 None:intergenic 30.0%
TGTTGAAAATCTTACAAGAG+AGG + chr3_3:79748796-79748815 Msa0476030:CDS 30.0%
!!! ATTTTTTCGCTGAATGTTTC+TGG + chr3_3:79748883-79748902 Msa0476030:three_prime_UTR 30.0%
! TAGACTCTTTCTGAAAAGAA+TGG + chr3_3:79748929-79748948 Msa0476030:three_prime_UTR 30.0%
! AATGCTCTTTTATGTATGAG+AGG + chr3_3:79749187-79749206 Msa0476030:three_prime_UTR 30.0%
! ATGCTCTTTTATGTATGAGA+GGG + chr3_3:79749188-79749207 Msa0476030:three_prime_UTR 30.0%
! TAATGGATGATTCCACTGAT+CGG + chr3_3:79747841-79747860 Msa0476030:exon 35.0%
ACTTTGTACCTGTTATTGCT+TGG + chr3_3:79748043-79748062 Msa0476030:intron 35.0%
! TCTGAAATCCAAGCAATAAC+AGG - chr3_3:79748054-79748073 None:intergenic 35.0%
AAACATAGACATGTTTGACC+TGG + chr3_3:79748246-79748265 Msa0476030:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG + chr3_3:79748471-79748490 Msa0476030:intron 35.0%
ACATTTGGCAGCATGTAATT+CGG + chr3_3:79748577-79748596 Msa0476030:CDS 35.0%
TTCCATAGACCAAACAAACT+GGG - chr3_3:79748613-79748632 None:intergenic 35.0%
TAACAGCTTCAAGAAACTTG+CGG - chr3_3:79748641-79748660 None:intergenic 35.0%
CTTGAAGCTGTTAATCAGTT+AGG + chr3_3:79748648-79748667 Msa0476030:CDS 35.0%
!!! TAATGTTGTTTTACTGGCAG+AGG + chr3_3:79748742-79748761 Msa0476030:intron 35.0%
! CTCTTTCTGAAAAGAATGGA+TGG + chr3_3:79748933-79748952 Msa0476030:three_prime_UTR 35.0%
ATTCTGATTAACGGGAGTTA+TGG - chr3_3:79749037-79749056 None:intergenic 35.0%
CGGAGTATATTCTGATTAAC+GGG - chr3_3:79749045-79749064 None:intergenic 35.0%
CCGGAGTATATTCTGATTAA+CGG - chr3_3:79749046-79749065 None:intergenic 35.0%
CCGTTAATCAGAATATACTC+CGG + chr3_3:79749043-79749062 Msa0476030:three_prime_UTR 35.0%
CGTTAATCAGAATATACTCC+GGG + chr3_3:79749044-79749063 Msa0476030:three_prime_UTR 35.0%
GTTAATCAGAATATACTCCG+GGG + chr3_3:79749045-79749064 Msa0476030:three_prime_UTR 35.0%
TGATCAAACCATATGGACAT+TGG - chr3_3:79749075-79749094 None:intergenic 35.0%
TTGCAAGTGATCAAACCATA+TGG - chr3_3:79749082-79749101 None:intergenic 35.0%
CAAAAGCTTGGAACCTAATA+AGG - chr3_3:79749146-79749165 None:intergenic 35.0%
GGAAGAAAATTGCAAAAGCT+TGG - chr3_3:79749158-79749177 None:intergenic 35.0%
GGGCTATATTTAGATTTGGA+GGG - chr3_3:79749291-79749310 None:intergenic 35.0%
! TAATGGATGATTCCACTGAT+CGG + chr3_3:79747841-79747860 Msa0476030:exon 35.0%
ACTTTGTACCTGTTATTGCT+TGG + chr3_3:79748043-79748062 Msa0476030:intron 35.0%
! TCTGAAATCCAAGCAATAAC+AGG - chr3_3:79748054-79748073 None:intergenic 35.0%
AAACATAGACATGTTTGACC+TGG + chr3_3:79748246-79748265 Msa0476030:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG + chr3_3:79748471-79748490 Msa0476030:intron 35.0%
ACATTTGGCAGCATGTAATT+CGG + chr3_3:79748577-79748596 Msa0476030:CDS 35.0%
TTCCATAGACCAAACAAACT+GGG - chr3_3:79748613-79748632 None:intergenic 35.0%
TAACAGCTTCAAGAAACTTG+CGG - chr3_3:79748641-79748660 None:intergenic 35.0%
CTTGAAGCTGTTAATCAGTT+AGG + chr3_3:79748648-79748667 Msa0476030:CDS 35.0%
!!! TAATGTTGTTTTACTGGCAG+AGG + chr3_3:79748742-79748761 Msa0476030:intron 35.0%
! CTCTTTCTGAAAAGAATGGA+TGG + chr3_3:79748933-79748952 Msa0476030:three_prime_UTR 35.0%
ATTCTGATTAACGGGAGTTA+TGG - chr3_3:79749037-79749056 None:intergenic 35.0%
CGGAGTATATTCTGATTAAC+GGG - chr3_3:79749045-79749064 None:intergenic 35.0%
CCGGAGTATATTCTGATTAA+CGG - chr3_3:79749046-79749065 None:intergenic 35.0%
CCGTTAATCAGAATATACTC+CGG + chr3_3:79749043-79749062 Msa0476030:three_prime_UTR 35.0%
CGTTAATCAGAATATACTCC+GGG + chr3_3:79749044-79749063 Msa0476030:three_prime_UTR 35.0%
GTTAATCAGAATATACTCCG+GGG + chr3_3:79749045-79749064 Msa0476030:three_prime_UTR 35.0%
TGATCAAACCATATGGACAT+TGG - chr3_3:79749075-79749094 None:intergenic 35.0%
TTGCAAGTGATCAAACCATA+TGG - chr3_3:79749082-79749101 None:intergenic 35.0%
CAAAAGCTTGGAACCTAATA+AGG - chr3_3:79749146-79749165 None:intergenic 35.0%
GGAAGAAAATTGCAAAAGCT+TGG - chr3_3:79749158-79749177 None:intergenic 35.0%
GGGCTATATTTAGATTTGGA+GGG - chr3_3:79749291-79749310 None:intergenic 35.0%
GTTTCCAAAAGCAAGAGAGA+AGG - chr3_3:79747909-79747928 None:intergenic 40.0%
TATCAAAAAGAAGCAGACCG+TGG - chr3_3:79747953-79747972 None:intergenic 40.0%
ACCTTCCTGTCATAAGTAAG+TGG + chr3_3:79748338-79748357 Msa0476030:intron 40.0%
CCTTCCTGTCATAAGTAAGT+GGG + chr3_3:79748339-79748358 Msa0476030:intron 40.0%
CTTCCTGTCATAAGTAAGTG+GGG + chr3_3:79748340-79748359 Msa0476030:intron 40.0%
TTCCTGTCATAAGTAAGTGG+GGG + chr3_3:79748341-79748360 Msa0476030:intron 40.0%
GTTGTCTGCATATGGTGATA+CGG + chr3_3:79748479-79748498 Msa0476030:CDS 40.0%
AGGTTTCAGCAGAAAATCAC+GGG - chr3_3:79748535-79748554 None:intergenic 40.0%
CAGGTTTCAGCAGAAAATCA+CGG - chr3_3:79748536-79748555 None:intergenic 40.0%
GCAGCATGTAATTCGGAATA+CGG + chr3_3:79748584-79748603 Msa0476030:CDS 40.0%
GTTCCATAGACCAAACAAAC+TGG - chr3_3:79748614-79748633 None:intergenic 40.0%
AAATCTTACAAGAGAGGACG+TGG + chr3_3:79748802-79748821 Msa0476030:CDS 40.0%
CTGAAAAGAATGGATGGTTC+TGG + chr3_3:79748939-79748958 Msa0476030:three_prime_UTR 40.0%
AGATTACCAACTATCCCACT+GGG - chr3_3:79748999-79749018 None:intergenic 40.0%
!! GGGATAGTTGGTAATCTGAA+CGG + chr3_3:79749002-79749021 Msa0476030:three_prime_UTR 40.0%
!! GGATAGTTGGTAATCTGAAC+GGG + chr3_3:79749003-79749022 Msa0476030:three_prime_UTR 40.0%
TGATCACTTGCAAAACAGCA+AGG + chr3_3:79749089-79749108 Msa0476030:three_prime_UTR 40.0%
ACCTAATAAGGACATGCTCA+TGG - chr3_3:79749134-79749153 None:intergenic 40.0%
ATTTAGATTTGGAGGGAGCA+AGG - chr3_3:79749284-79749303 None:intergenic 40.0%
CGGGCTATATTTAGATTTGG+AGG - chr3_3:79749292-79749311 None:intergenic 40.0%
GTTTCCAAAAGCAAGAGAGA+AGG - chr3_3:79747909-79747928 None:intergenic 40.0%
TATCAAAAAGAAGCAGACCG+TGG - chr3_3:79747953-79747972 None:intergenic 40.0%
ACCTTCCTGTCATAAGTAAG+TGG + chr3_3:79748338-79748357 Msa0476030:intron 40.0%
CCTTCCTGTCATAAGTAAGT+GGG + chr3_3:79748339-79748358 Msa0476030:intron 40.0%
CTTCCTGTCATAAGTAAGTG+GGG + chr3_3:79748340-79748359 Msa0476030:intron 40.0%
TTCCTGTCATAAGTAAGTGG+GGG + chr3_3:79748341-79748360 Msa0476030:intron 40.0%
GTTGTCTGCATATGGTGATA+CGG + chr3_3:79748479-79748498 Msa0476030:CDS 40.0%
AGGTTTCAGCAGAAAATCAC+GGG - chr3_3:79748535-79748554 None:intergenic 40.0%
CAGGTTTCAGCAGAAAATCA+CGG - chr3_3:79748536-79748555 None:intergenic 40.0%
GCAGCATGTAATTCGGAATA+CGG + chr3_3:79748584-79748603 Msa0476030:CDS 40.0%
GTTCCATAGACCAAACAAAC+TGG - chr3_3:79748614-79748633 None:intergenic 40.0%
AAATCTTACAAGAGAGGACG+TGG + chr3_3:79748802-79748821 Msa0476030:CDS 40.0%
CTGAAAAGAATGGATGGTTC+TGG + chr3_3:79748939-79748958 Msa0476030:three_prime_UTR 40.0%
AGATTACCAACTATCCCACT+GGG - chr3_3:79748999-79749018 None:intergenic 40.0%
!! GGGATAGTTGGTAATCTGAA+CGG + chr3_3:79749002-79749021 Msa0476030:three_prime_UTR 40.0%
!! GGATAGTTGGTAATCTGAAC+GGG + chr3_3:79749003-79749022 Msa0476030:three_prime_UTR 40.0%
TGATCACTTGCAAAACAGCA+AGG + chr3_3:79749089-79749108 Msa0476030:three_prime_UTR 40.0%
ACCTAATAAGGACATGCTCA+TGG - chr3_3:79749134-79749153 None:intergenic 40.0%
ATTTAGATTTGGAGGGAGCA+AGG - chr3_3:79749284-79749303 None:intergenic 40.0%
CGGGCTATATTTAGATTTGG+AGG - chr3_3:79749292-79749311 None:intergenic 40.0%
! TCCTCCTTCTCTCTTGCTTT+TGG + chr3_3:79747902-79747921 Msa0476030:CDS 45.0%
TCCAAAAGCAAGAGAGAAGG+AGG - chr3_3:79747906-79747925 None:intergenic 45.0%
CTCCGATCATGTCAATACCA+CGG + chr3_3:79747933-79747952 Msa0476030:CDS 45.0%
!! GACCGTGGTATTGACATGAT+CGG - chr3_3:79747938-79747957 None:intergenic 45.0%
TGTGAACTTCAGCGATTACC+AGG - chr3_3:79748267-79748286 None:intergenic 45.0%
TGAAGTTCACATGCCTGACA+TGG + chr3_3:79748276-79748295 Msa0476030:CDS 45.0%
AGCTTAAGTCCATCCATGTC+AGG - chr3_3:79748292-79748311 None:intergenic 45.0%
ACTTAAGCTGCTGGAACTTG+TGG + chr3_3:79748303-79748322 Msa0476030:CDS 45.0%
CTTAAGCTGCTGGAACTTGT+GGG + chr3_3:79748304-79748323 Msa0476030:CDS 45.0%
GGAACTTGTGGGACTTGAAA+TGG + chr3_3:79748315-79748334 Msa0476030:CDS 45.0%
CCCACTTACTTATGACAGGA+AGG - chr3_3:79748342-79748361 None:intergenic 45.0%
ATCCCCCACTTACTTATGAC+AGG - chr3_3:79748346-79748365 None:intergenic 45.0%
GTGATGAAGGCAATTTCCCA+CGG + chr3_3:79748507-79748526 Msa0476030:CDS 45.0%
TCTGCTGAAACCTGTGAGAT+TGG + chr3_3:79748542-79748561 Msa0476030:CDS 45.0%
TGGAGGAGCTAAGGAACATT+TGG + chr3_3:79748562-79748581 Msa0476030:CDS 45.0%
! ATACGGAGTCCCAGTTTGTT+TGG + chr3_3:79748601-79748620 Msa0476030:CDS 45.0%
! GTCCCAGTTTGTTTGGTCTA+TGG + chr3_3:79748608-79748627 Msa0476030:CDS 45.0%
!! CTAGAAAAGTGCCTGGAGAT+GGG - chr3_3:79748831-79748850 None:intergenic 45.0%
!! ACTAGAAAAGTGCCTGGAGA+TGG - chr3_3:79748832-79748851 None:intergenic 45.0%
!! TAGAGGACTAGAAAAGTGCC+TGG - chr3_3:79748838-79748857 None:intergenic 45.0%
! TTCAGATCCTTTTCACCCAG+TGG + chr3_3:79748981-79749000 Msa0476030:three_prime_UTR 45.0%
! TCAGATCCTTTTCACCCAGT+GGG + chr3_3:79748982-79749001 Msa0476030:three_prime_UTR 45.0%
AACTATCCCACTGGGTGAAA+AGG - chr3_3:79748991-79749010 None:intergenic 45.0%
! TTTTCACCCAGTGGGATAGT+TGG + chr3_3:79748990-79749009 Msa0476030:three_prime_UTR 45.0%
CAGATTACCAACTATCCCAC+TGG - chr3_3:79749000-79749019 None:intergenic 45.0%
ATATGGACATTGGCATTCCC+CGG - chr3_3:79749065-79749084 None:intergenic 45.0%
ATAAGGACATGCTCATGGCT+AGG - chr3_3:79749129-79749148 None:intergenic 45.0%
GCCATGAGCATGTCCTTATT+AGG + chr3_3:79749130-79749149 Msa0476030:three_prime_UTR 45.0%
! TCCTCCTTCTCTCTTGCTTT+TGG + chr3_3:79747902-79747921 Msa0476030:CDS 45.0%
TCCAAAAGCAAGAGAGAAGG+AGG - chr3_3:79747906-79747925 None:intergenic 45.0%
CTCCGATCATGTCAATACCA+CGG + chr3_3:79747933-79747952 Msa0476030:CDS 45.0%
!! GACCGTGGTATTGACATGAT+CGG - chr3_3:79747938-79747957 None:intergenic 45.0%
TGTGAACTTCAGCGATTACC+AGG - chr3_3:79748267-79748286 None:intergenic 45.0%
TGAAGTTCACATGCCTGACA+TGG + chr3_3:79748276-79748295 Msa0476030:CDS 45.0%
AGCTTAAGTCCATCCATGTC+AGG - chr3_3:79748292-79748311 None:intergenic 45.0%
ACTTAAGCTGCTGGAACTTG+TGG + chr3_3:79748303-79748322 Msa0476030:CDS 45.0%
CTTAAGCTGCTGGAACTTGT+GGG + chr3_3:79748304-79748323 Msa0476030:CDS 45.0%
GGAACTTGTGGGACTTGAAA+TGG + chr3_3:79748315-79748334 Msa0476030:CDS 45.0%
CCCACTTACTTATGACAGGA+AGG - chr3_3:79748342-79748361 None:intergenic 45.0%
ATCCCCCACTTACTTATGAC+AGG - chr3_3:79748346-79748365 None:intergenic 45.0%
GTGATGAAGGCAATTTCCCA+CGG + chr3_3:79748507-79748526 Msa0476030:CDS 45.0%
TCTGCTGAAACCTGTGAGAT+TGG + chr3_3:79748542-79748561 Msa0476030:CDS 45.0%
TGGAGGAGCTAAGGAACATT+TGG + chr3_3:79748562-79748581 Msa0476030:CDS 45.0%
! ATACGGAGTCCCAGTTTGTT+TGG + chr3_3:79748601-79748620 Msa0476030:CDS 45.0%
! GTCCCAGTTTGTTTGGTCTA+TGG + chr3_3:79748608-79748627 Msa0476030:CDS 45.0%
!! CTAGAAAAGTGCCTGGAGAT+GGG - chr3_3:79748831-79748850 None:intergenic 45.0%
!! ACTAGAAAAGTGCCTGGAGA+TGG - chr3_3:79748832-79748851 None:intergenic 45.0%
!! TAGAGGACTAGAAAAGTGCC+TGG - chr3_3:79748838-79748857 None:intergenic 45.0%
! TTCAGATCCTTTTCACCCAG+TGG + chr3_3:79748981-79749000 Msa0476030:three_prime_UTR 45.0%
! TCAGATCCTTTTCACCCAGT+GGG + chr3_3:79748982-79749001 Msa0476030:three_prime_UTR 45.0%
AACTATCCCACTGGGTGAAA+AGG - chr3_3:79748991-79749010 None:intergenic 45.0%
! TTTTCACCCAGTGGGATAGT+TGG + chr3_3:79748990-79749009 Msa0476030:three_prime_UTR 45.0%
CAGATTACCAACTATCCCAC+TGG - chr3_3:79749000-79749019 None:intergenic 45.0%
ATATGGACATTGGCATTCCC+CGG - chr3_3:79749065-79749084 None:intergenic 45.0%
ATAAGGACATGCTCATGGCT+AGG - chr3_3:79749129-79749148 None:intergenic 45.0%
GCCATGAGCATGTCCTTATT+AGG + chr3_3:79749130-79749149 Msa0476030:three_prime_UTR 45.0%
! TCCACTGATCGGTTTCCCAT+CGG + chr3_3:79747852-79747871 Msa0476030:CDS 50.0%
!! CGTGGTATTGACATGATCGG+AGG - chr3_3:79747935-79747954 None:intergenic 50.0%
GTTCACATGCCTGACATGGA+TGG + chr3_3:79748280-79748299 Msa0476030:CDS 50.0%
! CATGGATGGACTTAAGCTGC+TGG + chr3_3:79748294-79748313 Msa0476030:CDS 50.0%
TGCATATGGTGATACGGAGC+TGG + chr3_3:79748485-79748504 Msa0476030:CDS 50.0%
! TGATACGGAGCTGGTGATGA+AGG + chr3_3:79748494-79748513 Msa0476030:CDS 50.0%
GCTGAAACCTGTGAGATTGG+AGG + chr3_3:79748545-79748564 Msa0476030:CDS 50.0%
CTTAGCTCCTCCAATCTCAC+AGG - chr3_3:79748555-79748574 None:intergenic 50.0%
CTGTGAGATTGGAGGAGCTA+AGG + chr3_3:79748553-79748572 Msa0476030:CDS 50.0%
GGTAATCTGAACGGGCAGTT+TGG + chr3_3:79749011-79749030 Msa0476030:three_prime_UTR 50.0%
GGGGAATGCCAATGTCCATA+TGG + chr3_3:79749064-79749083 Msa0476030:three_prime_UTR 50.0%
! TCCACTGATCGGTTTCCCAT+CGG + chr3_3:79747852-79747871 Msa0476030:CDS 50.0%
!! CGTGGTATTGACATGATCGG+AGG - chr3_3:79747935-79747954 None:intergenic 50.0%
GTTCACATGCCTGACATGGA+TGG + chr3_3:79748280-79748299 Msa0476030:CDS 50.0%
! CATGGATGGACTTAAGCTGC+TGG + chr3_3:79748294-79748313 Msa0476030:CDS 50.0%
TGCATATGGTGATACGGAGC+TGG + chr3_3:79748485-79748504 Msa0476030:CDS 50.0%
! TGATACGGAGCTGGTGATGA+AGG + chr3_3:79748494-79748513 Msa0476030:CDS 50.0%
GCTGAAACCTGTGAGATTGG+AGG + chr3_3:79748545-79748564 Msa0476030:CDS 50.0%
CTTAGCTCCTCCAATCTCAC+AGG - chr3_3:79748555-79748574 None:intergenic 50.0%
CTGTGAGATTGGAGGAGCTA+AGG + chr3_3:79748553-79748572 Msa0476030:CDS 50.0%
GGTAATCTGAACGGGCAGTT+TGG + chr3_3:79749011-79749030 Msa0476030:three_prime_UTR 50.0%
GGGGAATGCCAATGTCCATA+TGG + chr3_3:79749064-79749083 Msa0476030:three_prime_UTR 50.0%
TCCGATGGGAAACCGATCAG+TGG - chr3_3:79747856-79747875 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG - chr3_3:79747870-79747889 None:intergenic 55.0%
AGCGAGAACACGCATTCCGA+TGG - chr3_3:79747871-79747890 None:intergenic 55.0%
! CAGAAAATCACGGGCACCGT+GGG - chr3_3:79748526-79748545 None:intergenic 55.0%
TCCGATGGGAAACCGATCAG+TGG - chr3_3:79747856-79747875 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG - chr3_3:79747870-79747889 None:intergenic 55.0%
AGCGAGAACACGCATTCCGA+TGG - chr3_3:79747871-79747890 None:intergenic 55.0%
! CAGAAAATCACGGGCACCGT+GGG - chr3_3:79748526-79748545 None:intergenic 55.0%
! GCAGAAAATCACGGGCACCG+TGG - chr3_3:79748527-79748546 None:intergenic 60.0%
! GCAGAAAATCACGGGCACCG+TGG - chr3_3:79748527-79748546 None:intergenic 60.0%
GGACGTGGCGACCCATCTCC+AGG + chr3_3:79748817-79748836 Msa0476030:CDS 70.0%
GGACGTGGCGACCCATCTCC+AGG + chr3_3:79748817-79748836 Msa0476030:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 79747810 79749312 79747810 ID=Msa0476030;Name=Msa0476030
chr3_3 mRNA 79747810 79749312 79747810 ID=Msa0476030-mRNA-1;Parent=Msa0476030;Name=Msa0476030-mRNA-1;_AED=0.29;_eAED=0.29;_QI=33|1|1|1|1|1|4|462|184
chr3_3 exon 79747810 79747954 79747810 ID=Msa0476030-mRNA-1:exon:21629;Parent=Msa0476030-mRNA-1
chr3_3 exon 79748200 79748352 79748200 ID=Msa0476030-mRNA-1:exon:21630;Parent=Msa0476030-mRNA-1
chr3_3 exon 79748478 79748678 79748478 ID=Msa0476030-mRNA-1:exon:21631;Parent=Msa0476030-mRNA-1
chr3_3 exon 79748762 79749312 79748762 ID=Msa0476030-mRNA-1:exon:21632;Parent=Msa0476030-mRNA-1
chr3_3 five_prime_UTR 79747810 79747842 79747810 ID=Msa0476030-mRNA-1:five_prime_utr;Parent=Msa0476030-mRNA-1
chr3_3 CDS 79747843 79747954 79747843 ID=Msa0476030-mRNA-1:cds;Parent=Msa0476030-mRNA-1
chr3_3 CDS 79748200 79748352 79748200 ID=Msa0476030-mRNA-1:cds;Parent=Msa0476030-mRNA-1
chr3_3 CDS 79748478 79748678 79748478 ID=Msa0476030-mRNA-1:cds;Parent=Msa0476030-mRNA-1
chr3_3 CDS 79748762 79748850 79748762 ID=Msa0476030-mRNA-1:cds;Parent=Msa0476030-mRNA-1
chr3_3 three_prime_UTR 79748851 79749312 79748851 ID=Msa0476030-mRNA-1:three_prime_utr;Parent=Msa0476030-mRNA-1
Gene Sequence

>Msa0476030

ATGGATGATTCCACTGATCGGTTTCCCATCGGAATGCGTGTTCTCGCTGTCGACGACAATCCTCCTTCTCTCTTGCTTTTGGAAACTCTCCTCCGATCATGTCAATACCACGTAACCACAACTAGTAATGTAATAACGGCATTGACTATGTTGCGAGAAAACATAGACATGTTTGACCTGGTAATCGCTGAAGTTCACATGCCTGACATGGATGGACTTAAGCTGCTGGAACTTGTGGGACTTGAAATGGACCTTCCTGTCATAATGTTGTCTGCATATGGTGATACGGAGCTGGTGATGAAGGCAATTTCCCACGGTGCCCGTGATTTTCTGCTGAAACCTGTGAGATTGGAGGAGCTAAGGAACATTTGGCAGCATGTAATTCGGAATACGGAGTCCCAGTTTGTTTGGTCTATGGAACTGCACCGCAAGTTTCTTGAAGCTGTTAATCAGTTAGGAGTTGACAAGGCTGTACCCAAAAAGATTTTTGAATTGATGAATGTTGAAAATCTTACAAGAGAGGACGTGGCGACCCATCTCCAGGCACTTTTCTAG
Protein sequence

>Msa0476030

MDDSTDRFPIGMRVLAVDDNPPSLLLLETLLRSCQYHVTTTSNVITALTMLRENIDMFDLVIAEVHMPDMDGLKLLELVGLEMDLPVIMLSAYGDTELVMKAISHGARDFLLKPVRLEELRNIWQHVIRNTESQFVWSMELHRKFLEAVNQLGVDKAVPKKIFELMNVENLTREDVATHLQALF*