Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476370 | AES73439.1 | 85.010 | 507 | 44 | 7 | 1 | 488 | 5 | 498 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476370 | G7J8D2 | 85.010 | 507 | 44 | 7 | 1 | 488 | 5 | 498 | 0.0 | 846 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0476370 | TF | RWP-RK |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476370 | MtrunA17_Chr3g0136081 | 81.250 | 528 | 46 | 7 | 1 | 488 | 5 | 519 | 0.0 | 833 |
| Msa0476370 | MtrunA17_Chr3g0105711 | 50.991 | 555 | 181 | 15 | 1 | 487 | 10 | 541 | 1.16e-156 | 456 |
| Msa0476370 | MtrunA17_Chr5g0406901 | 50.725 | 69 | 32 | 1 | 383 | 451 | 199 | 265 | 2.68e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476370 | AT5G16100.2 | 32.721 | 272 | 128 | 11 | 248 | 472 | 177 | 440 | 4.85e-33 | 130 |
Find 101 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACAATGTTTAATCATTT+TGG | 0.139096 | 3_3:+80177087 | None:intergenic |
| TACCTTTCTGTGGGGCCATC+TGG | 0.198703 | 3_3:+80177301 | None:intergenic |
| GGCAATACATTGGAATTAAA+TGG | 0.208227 | 3_3:+80178766 | None:intergenic |
| TTCCAACTCCATGAAGATTT+TGG | 0.209996 | 3_3:+80178887 | None:intergenic |
| AATCTTATTCAAAATAATTC+AGG | 0.275363 | 3_3:-80177775 | Msa0476370:intron |
| CACCATCAGATACCTGTTAA+TGG | 0.281140 | 3_3:-80178097 | Msa0476370:CDS |
| TTTGAAAAGCTTGAGATTCA+TGG | 0.294484 | 3_3:-80178148 | Msa0476370:CDS |
| TTGGATTGATGATATTAATA+TGG | 0.313839 | 3_3:-80177800 | Msa0476370:CDS |
| CTTGGTGGTAGTAATAATAA+TGG | 0.330532 | 3_3:-80178796 | Msa0476370:CDS |
| ACCATCAGATACCTGTTAAT+GGG | 0.352749 | 3_3:-80178096 | Msa0476370:CDS |
| ACTGATGGGGCCCCATTAAC+AGG | 0.356308 | 3_3:+80178085 | None:intergenic |
| GGGGTCCATGCCGAGTTTGT+TGG | 0.357115 | 3_3:+80178911 | None:intergenic |
| TGATCTGCTGCTTCATCAAT+AGG | 0.368145 | 3_3:+80177383 | None:intergenic |
| TACTATGGACTTGGAATACT+TGG | 0.370161 | 3_3:-80178814 | Msa0476370:CDS |
| CAAGAGCAAATGGGTGATAA+TGG | 0.372132 | 3_3:-80177591 | Msa0476370:CDS |
| CCATCCCAAGAAAATTACTA+TGG | 0.379676 | 3_3:-80178829 | Msa0476370:CDS |
| CTCTTTGCACTGGATTGGAT+TGG | 0.394071 | 3_3:-80177819 | Msa0476370:CDS |
| GGGTCCATGCCGAGTTTGTT+GGG | 0.400094 | 3_3:+80178912 | None:intergenic |
| AAAACGGGAATCTGAATTGC+AGG | 0.401372 | 3_3:+80178391 | None:intergenic |
| TCAAATTACTAGCAAATCAA+TGG | 0.407732 | 3_3:-80177168 | Msa0476370:CDS |
| TCTTATGTTTACAGATGAAT+TGG | 0.410262 | 3_3:-80177619 | Msa0476370:intron |
| TCGGTTTGGTTCAACAAAAC+GGG | 0.413527 | 3_3:+80178376 | None:intergenic |
| TTGATTAAGTGCCCGCAGTT+CGG | 0.413996 | 3_3:+80178357 | None:intergenic |
| TTCGGTTTGGTTCAACAAAA+CGG | 0.419751 | 3_3:+80178375 | None:intergenic |
| GATTCTAAATTGTAAGCAAA+TGG | 0.423137 | 3_3:+80178715 | None:intergenic |
| GTAATTTGATCTGCTTCAAA+AGG | 0.424097 | 3_3:+80177182 | None:intergenic |
| TGAGACTCTTTGCACTGGAT+TGG | 0.424222 | 3_3:-80177824 | Msa0476370:CDS |
| CAAGAAAATTACTATGGACT+TGG | 0.426462 | 3_3:-80178823 | Msa0476370:CDS |
| GATAAATCTGCTAGTGTTGT+TGG | 0.428775 | 3_3:+80178976 | None:intergenic |
| ACCTTTCTGTGGGGCCATCT+GGG | 0.433450 | 3_3:+80177302 | None:intergenic |
| GGACCCCACCAAAATCTTCA+TGG | 0.435855 | 3_3:-80178895 | Msa0476370:CDS |
| CCATGATATTCAACAAGGTC+AGG | 0.445114 | 3_3:-80178632 | Msa0476370:CDS |
| ATGAACTACCATCCACTTCA+AGG | 0.454887 | 3_3:+80178446 | None:intergenic |
| TCATATTGATCTTGAACCAT+TGG | 0.458294 | 3_3:+80178505 | None:intergenic |
| AAGAAAACTTGTCGTAAAGC+AGG | 0.469657 | 3_3:-80177329 | Msa0476370:CDS |
| CCTGACCTTGTTGAATATCA+TGG | 0.476020 | 3_3:+80178632 | None:intergenic |
| CACCAAAATCTTCATGGAGT+TGG | 0.477847 | 3_3:-80178889 | Msa0476370:CDS |
| TTATTCATATTGAAGAAACT+TGG | 0.478548 | 3_3:+80179000 | None:intergenic |
| TAAGTGCCCGCAGTTCGGTT+TGG | 0.482116 | 3_3:+80178362 | None:intergenic |
| ACTTGTTCTGAGAGGTTCCT+AGG | 0.487950 | 3_3:+80177564 | None:intergenic |
| AGGCAAGGGCAAGGACTGAA+GGG | 0.491007 | 3_3:-80177129 | Msa0476370:CDS |
| AGCAAATCAATGGGAAGGAC+AGG | 0.496313 | 3_3:-80177158 | Msa0476370:CDS |
| ATTGGTGGAGCAAGAGCAAA+TGG | 0.500485 | 3_3:-80177601 | Msa0476370:CDS |
| CAAATTACTAGCAAATCAAT+GGG | 0.500638 | 3_3:-80177167 | Msa0476370:CDS |
| TATCGCTGCTGCGGCTAAAG+TGG | 0.502806 | 3_3:+80177022 | None:intergenic |
| TATGTTTACAGATGAATTGG+TGG | 0.515772 | 3_3:-80177616 | Msa0476370:intron |
| AACTGCGGGCACTTAATCAA+TGG | 0.515958 | 3_3:-80178354 | Msa0476370:CDS |
| GAGGCAAGGGCAAGGACTGA+AGG | 0.520542 | 3_3:-80177130 | Msa0476370:CDS |
| TATTCATATTGAAGAAACTT+GGG | 0.521262 | 3_3:+80179001 | None:intergenic |
| TCAATCATTTGATAAACTGA+TGG | 0.522363 | 3_3:+80178070 | None:intergenic |
| GTCTCATAAAATTCAGACAT+TGG | 0.526543 | 3_3:+80177841 | None:intergenic |
| CAATCATTTGATAAACTGAT+GGG | 0.528489 | 3_3:+80178071 | None:intergenic |
| TTACCACTCTGATTCTGTTG+TGG | 0.528506 | 3_3:+80178745 | None:intergenic |
| GCTTGAGATTCATGGAAGGT+TGG | 0.532570 | 3_3:-80178140 | Msa0476370:CDS |
| ATTGAAGAAACTTGGGTCAA+CGG | 0.535851 | 3_3:+80179008 | None:intergenic |
| TGGAATAAATAGCCTTGAAG+TGG | 0.539422 | 3_3:-80178458 | Msa0476370:CDS |
| GTTGAACCAAACCGAACTGC+GGG | 0.542214 | 3_3:-80178368 | Msa0476370:CDS |
| ATAAATCTGCTAGTGTTGTT+GGG | 0.542463 | 3_3:+80178977 | None:intergenic |
| TATGGACTTGGAATACTTGG+TGG | 0.542573 | 3_3:-80178811 | Msa0476370:CDS |
| CTGCGGCTAAAGTGGCAAGA+AGG | 0.552292 | 3_3:+80177030 | None:intergenic |
| AGTTTGTTGGGACAGTGCAG+TGG | 0.563322 | 3_3:+80178924 | None:intergenic |
| ACCCAGATGGCCCCACAGAA+AGG | 0.563782 | 3_3:-80177303 | Msa0476370:intron |
| CCCCATTAACAGGTATCTGA+TGG | 0.567348 | 3_3:+80178095 | None:intergenic |
| GTAAAGCAGGGTTACCCAGA+TGG | 0.568095 | 3_3:-80177316 | Msa0476370:CDS |
| TGTGTGGAACGTCATTTAGC+AGG | 0.571153 | 3_3:-80177883 | Msa0476370:CDS |
| GTCCATGTTGTTGTACATCA+TGG | 0.572620 | 3_3:+80178563 | None:intergenic |
| AGAAAACTTGTCGTAAAGCA+GGG | 0.586540 | 3_3:-80177328 | Msa0476370:CDS |
| ACCAAAATGATTAAACATTG+TGG | 0.587437 | 3_3:-80177088 | Msa0476370:CDS |
| CGGCTAAAGTGGCAAGAAGG+CGG | 0.587716 | 3_3:+80177033 | None:intergenic |
| ATTCTGTTGTGGCAATACAT+TGG | 0.591773 | 3_3:+80178756 | None:intergenic |
| CACCATGATGTACAACAACA+TGG | 0.591982 | 3_3:-80178565 | Msa0476370:CDS |
| AGGACAGGATACAGAGGCAA+GGG | 0.593438 | 3_3:-80177143 | Msa0476370:CDS |
| CTGTCCCAACAAACTCGGCA+TGG | 0.594201 | 3_3:-80178916 | Msa0476370:CDS |
| GTTTGTTGGGACAGTGCAGT+GGG | 0.598692 | 3_3:+80178925 | None:intergenic |
| GATATTCAACAAGGTCAGGA+TGG | 0.598749 | 3_3:-80178628 | Msa0476370:CDS |
| AAAATGATTAAACATTGTGG+TGG | 0.599399 | 3_3:-80177085 | Msa0476370:CDS |
| ATAAATAGCCTTGAAGTGGA+TGG | 0.603975 | 3_3:-80178454 | Msa0476370:CDS |
| CTGCACTGTCCCAACAAACT+CGG | 0.604462 | 3_3:-80178921 | Msa0476370:CDS |
| TGAATATCATGGTAAATGAA+CGG | 0.610177 | 3_3:+80178643 | None:intergenic |
| CCATCAGATACCTGTTAATG+GGG | 0.617286 | 3_3:-80178095 | Msa0476370:CDS |
| AAAAGCTTGAGATTCATGGA+AGG | 0.617730 | 3_3:-80178144 | Msa0476370:CDS |
| GGCAAGGGCAAGGACTGAAG+GGG | 0.618518 | 3_3:-80177128 | Msa0476370:CDS |
| TTACTAGCAAATCAATGGGA+AGG | 0.619972 | 3_3:-80177163 | Msa0476370:CDS |
| TGTTGAACCAAACCGAACTG+CGG | 0.627319 | 3_3:-80178369 | Msa0476370:CDS |
| CAACAACATGGACATGGACA+TGG | 0.630152 | 3_3:-80178553 | Msa0476370:CDS |
| CATCATATTCAACAACTGCA+TGG | 0.630346 | 3_3:-80178679 | Msa0476370:CDS |
| AGAGAAATCATACACACTGA+TGG | 0.630751 | 3_3:-80178286 | Msa0476370:intron |
| AAATACGGGGTTACTGTGGG+TGG | 0.632071 | 3_3:+80178331 | None:intergenic |
| GCGATGTCATACAACGCGGT+TGG | 0.634750 | 3_3:+80177055 | None:intergenic |
| AGGATACAGAGGCAAGGGCA+AGG | 0.638191 | 3_3:-80177138 | Msa0476370:CDS |
| AAGGACAGGATACAGAGGCA+AGG | 0.639471 | 3_3:-80177144 | Msa0476370:CDS |
| ATTTACCATGATATTCAACA+AGG | 0.642604 | 3_3:-80178637 | Msa0476370:CDS |
| ATATTATTACTTGTTCTGAG+AGG | 0.643167 | 3_3:+80177556 | None:intergenic |
| GATGTACAACAACATGGACA+TGG | 0.659086 | 3_3:-80178559 | Msa0476370:CDS |
| AATCATTTGATAAACTGATG+GGG | 0.687280 | 3_3:+80178072 | None:intergenic |
| TTGGTGGAGCAAGAGCAAAT+GGG | 0.694143 | 3_3:-80177600 | Msa0476370:CDS |
| ATGGGAAGGACAGGATACAG+AGG | 0.708986 | 3_3:-80177149 | Msa0476370:CDS |
| TGGGTGATAATGGAACGCCT+AGG | 0.709329 | 3_3:-80177581 | Msa0476370:CDS |
| CATATTCAACAACTGCATGG+TGG | 0.712817 | 3_3:-80178676 | Msa0476370:CDS |
| TTGCCACAACAGAATCAGAG+TGG | 0.727563 | 3_3:-80178748 | Msa0476370:CDS |
| GGCGGCGATGTCATACAACG+CGG | 0.812023 | 3_3:+80177051 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAATAATAATTTTTCATT+TGG | - | chr3_3:80177606-80177625 | Msa0476370:CDS | 10.0% |
| !!! | AACAATAATAATTTTTCATT+TGG | - | chr3_3:80177606-80177625 | Msa0476370:CDS | 10.0% |
| !!! | ATTGTTGTTATTTTTATCAA+TGG | + | chr3_3:80177133-80177152 | None:intergenic | 15.0% |
| !! | TATCAAAATAATAGAAACAT+GGG | + | chr3_3:80177860-80177879 | None:intergenic | 15.0% |
| !! | ATATCAAAATAATAGAAACA+TGG | + | chr3_3:80177861-80177880 | None:intergenic | 15.0% |
| !! | AATCTTATTCAAAATAATTC+AGG | - | chr3_3:80178309-80178328 | Msa0476370:CDS | 15.0% |
| !!! | ATTGTTGTTATTTTTATCAA+TGG | + | chr3_3:80177133-80177152 | None:intergenic | 15.0% |
| !! | TATCAAAATAATAGAAACAT+GGG | + | chr3_3:80177860-80177879 | None:intergenic | 15.0% |
| !! | ATATCAAAATAATAGAAACA+TGG | + | chr3_3:80177861-80177880 | None:intergenic | 15.0% |
| !! | AATCTTATTCAAAATAATTC+AGG | - | chr3_3:80178309-80178328 | Msa0476370:CDS | 15.0% |
| !! | TATTCATATTGAAGAAACTT+GGG | + | chr3_3:80177086-80177105 | None:intergenic | 20.0% |
| !! | TTATTCATATTGAAGAAACT+TGG | + | chr3_3:80177087-80177106 | None:intergenic | 20.0% |
| !! | TGATAAAAATAACAACAATG+TGG | - | chr3_3:80177134-80177153 | Msa0476370:CDS | 20.0% |
| !! | GATAAAAATAACAACAATGT+GGG | - | chr3_3:80177135-80177154 | Msa0476370:CDS | 20.0% |
| !!! | TGGTAATATTGATTCATTTT+CGG | - | chr3_3:80177476-80177495 | Msa0476370:intron | 20.0% |
| !!! | AAAAATTCTTTATTTCACCA+AGG | + | chr3_3:80178170-80178189 | None:intergenic | 20.0% |
| !!! | TGGTGAAATAAAGAATTTTT+TGG | - | chr3_3:80178170-80178189 | Msa0476370:intron | 20.0% |
| !!! | TTGGATTGATGATATTAATA+TGG | - | chr3_3:80178284-80178303 | Msa0476370:intron | 20.0% |
| !! | TATTCATATTGAAGAAACTT+GGG | + | chr3_3:80177086-80177105 | None:intergenic | 20.0% |
| !! | TTATTCATATTGAAGAAACT+TGG | + | chr3_3:80177087-80177106 | None:intergenic | 20.0% |
| !! | TGATAAAAATAACAACAATG+TGG | - | chr3_3:80177134-80177153 | Msa0476370:CDS | 20.0% |
| !! | GATAAAAATAACAACAATGT+GGG | - | chr3_3:80177135-80177154 | Msa0476370:CDS | 20.0% |
| !!! | TGGTAATATTGATTCATTTT+CGG | - | chr3_3:80177476-80177495 | Msa0476370:intron | 20.0% |
| !!! | AAAAATTCTTTATTTCACCA+AGG | + | chr3_3:80178170-80178189 | None:intergenic | 20.0% |
| !!! | TGGTGAAATAAAGAATTTTT+TGG | - | chr3_3:80178170-80178189 | Msa0476370:intron | 20.0% |
| !!! | TTGGATTGATGATATTAATA+TGG | - | chr3_3:80178284-80178303 | Msa0476370:intron | 20.0% |
| !! | AAGTCCATAGTAATTTTCTT+GGG | + | chr3_3:80177262-80177281 | None:intergenic | 25.0% |
| ! | GATTCTAAATTGTAAGCAAA+TGG | + | chr3_3:80177372-80177391 | None:intergenic | 25.0% |
| !! | TGAATATGATGATCATTTTC+TGG | + | chr3_3:80177396-80177415 | None:intergenic | 25.0% |
| ! | TGAATATCATGGTAAATGAA+CGG | + | chr3_3:80177444-80177463 | None:intergenic | 25.0% |
| ! | ATTTACCATGATATTCAACA+AGG | - | chr3_3:80177447-80177466 | Msa0476370:intron | 25.0% |
| ! | AATCATTTGATAAACTGATG+GGG | + | chr3_3:80178015-80178034 | None:intergenic | 25.0% |
| ! | CAATCATTTGATAAACTGAT+GGG | + | chr3_3:80178016-80178035 | None:intergenic | 25.0% |
| ! | TCAATCATTTGATAAACTGA+TGG | + | chr3_3:80178017-80178036 | None:intergenic | 25.0% |
| !! | AACTTTTGTAACAGTTTTTG+TGG | - | chr3_3:80178138-80178157 | Msa0476370:CDS | 25.0% |
| !! | ACTTTTGTAACAGTTTTTGT+GGG | - | chr3_3:80178139-80178158 | Msa0476370:CDS | 25.0% |
| ! | TCTTATGTTTACAGATGAAT+TGG | - | chr3_3:80178465-80178484 | Msa0476370:CDS | 25.0% |
| !! | ATATTATTACTTGTTCTGAG+AGG | + | chr3_3:80178531-80178550 | None:intergenic | 25.0% |
| ! | TCTTGTGTGTTATACTTATT+TGG | - | chr3_3:80178814-80178833 | Msa0476370:CDS | 25.0% |
| ! | AGACACATTATATTAGCAAA+AGG | + | chr3_3:80178859-80178878 | None:intergenic | 25.0% |
| ! | TCAAATTACTAGCAAATCAA+TGG | - | chr3_3:80178916-80178935 | Msa0476370:CDS | 25.0% |
| ! | CAAATTACTAGCAAATCAAT+GGG | - | chr3_3:80178917-80178936 | Msa0476370:CDS | 25.0% |
| !!! | GTTTAATCATTTTGGTTTGA+AGG | + | chr3_3:80178992-80179011 | None:intergenic | 25.0% |
| ! | ACCAAAATGATTAAACATTG+TGG | - | chr3_3:80178996-80179015 | Msa0476370:CDS | 25.0% |
| !! | ACCACAATGTTTAATCATTT+TGG | + | chr3_3:80179000-80179019 | None:intergenic | 25.0% |
| ! | AAAATGATTAAACATTGTGG+TGG | - | chr3_3:80178999-80179018 | Msa0476370:CDS | 25.0% |
| !! | AAGTCCATAGTAATTTTCTT+GGG | + | chr3_3:80177262-80177281 | None:intergenic | 25.0% |
| ! | GATTCTAAATTGTAAGCAAA+TGG | + | chr3_3:80177372-80177391 | None:intergenic | 25.0% |
| !! | TGAATATGATGATCATTTTC+TGG | + | chr3_3:80177396-80177415 | None:intergenic | 25.0% |
| ! | TGAATATCATGGTAAATGAA+CGG | + | chr3_3:80177444-80177463 | None:intergenic | 25.0% |
| ! | ATTTACCATGATATTCAACA+AGG | - | chr3_3:80177447-80177466 | Msa0476370:intron | 25.0% |
| ! | AATCATTTGATAAACTGATG+GGG | + | chr3_3:80178015-80178034 | None:intergenic | 25.0% |
| ! | CAATCATTTGATAAACTGAT+GGG | + | chr3_3:80178016-80178035 | None:intergenic | 25.0% |
| ! | TCAATCATTTGATAAACTGA+TGG | + | chr3_3:80178017-80178036 | None:intergenic | 25.0% |
| !! | AACTTTTGTAACAGTTTTTG+TGG | - | chr3_3:80178138-80178157 | Msa0476370:CDS | 25.0% |
| !! | ACTTTTGTAACAGTTTTTGT+GGG | - | chr3_3:80178139-80178158 | Msa0476370:CDS | 25.0% |
| ! | TCTTATGTTTACAGATGAAT+TGG | - | chr3_3:80178465-80178484 | Msa0476370:CDS | 25.0% |
| !! | ATATTATTACTTGTTCTGAG+AGG | + | chr3_3:80178531-80178550 | None:intergenic | 25.0% |
| ! | TCTTGTGTGTTATACTTATT+TGG | - | chr3_3:80178814-80178833 | Msa0476370:CDS | 25.0% |
| ! | AGACACATTATATTAGCAAA+AGG | + | chr3_3:80178859-80178878 | None:intergenic | 25.0% |
| ! | TCAAATTACTAGCAAATCAA+TGG | - | chr3_3:80178916-80178935 | Msa0476370:CDS | 25.0% |
| ! | CAAATTACTAGCAAATCAAT+GGG | - | chr3_3:80178917-80178936 | Msa0476370:CDS | 25.0% |
| !!! | GTTTAATCATTTTGGTTTGA+AGG | + | chr3_3:80178992-80179011 | None:intergenic | 25.0% |
| ! | ACCAAAATGATTAAACATTG+TGG | - | chr3_3:80178996-80179015 | Msa0476370:CDS | 25.0% |
| !! | ACCACAATGTTTAATCATTT+TGG | + | chr3_3:80179000-80179019 | None:intergenic | 25.0% |
| ! | AAAATGATTAAACATTGTGG+TGG | - | chr3_3:80178999-80179018 | Msa0476370:CDS | 25.0% |
| ! | ATAAATCTGCTAGTGTTGTT+GGG | + | chr3_3:80177110-80177129 | None:intergenic | 30.0% |
| ! | CAAGTCCATAGTAATTTTCT+TGG | + | chr3_3:80177263-80177282 | None:intergenic | 30.0% |
| CAAGAAAATTACTATGGACT+TGG | - | chr3_3:80177261-80177280 | Msa0476370:intron | 30.0% | |
| ! | CTTGGTGGTAGTAATAATAA+TGG | - | chr3_3:80177288-80177307 | Msa0476370:intron | 30.0% |
| GGCAATACATTGGAATTAAA+TGG | + | chr3_3:80177321-80177340 | None:intergenic | 30.0% | |
| ! | TGAAACATTTTCTGTTCCAA+TGG | - | chr3_3:80177563-80177582 | Msa0476370:intron | 30.0% |
| TCATATTGATCTTGAACCAT+TGG | + | chr3_3:80177582-80177601 | None:intergenic | 30.0% | |
| TGACAACAACTGCAAAAATA+CGG | + | chr3_3:80177771-80177790 | None:intergenic | 30.0% | |
| TTTGAAAAGCTTGAGATTCA+TGG | - | chr3_3:80177936-80177955 | Msa0476370:intron | 30.0% | |
| TGTAGTACTATACTAAGACT+TGG | + | chr3_3:80178047-80178066 | None:intergenic | 30.0% | |
| GTCTCATAAAATTCAGACAT+TGG | + | chr3_3:80178246-80178265 | None:intergenic | 30.0% | |
| ! | AAAATAATTCAGGTTTGTCC+TGG | - | chr3_3:80178319-80178338 | Msa0476370:CDS | 30.0% |
| ! | TCTTTTCATTCATGTGACAT+TGG | - | chr3_3:80178426-80178445 | Msa0476370:CDS | 30.0% |
| ! | CTTTTCATTCATGTGACATT+GGG | - | chr3_3:80178427-80178446 | Msa0476370:CDS | 30.0% |
| TATGTTTACAGATGAATTGG+TGG | - | chr3_3:80178468-80178487 | Msa0476370:CDS | 30.0% | |
| TTCCTCTGTTCAATACAATA+GGG | + | chr3_3:80178632-80178651 | None:intergenic | 30.0% | |
| TTTCCTCTGTTCAATACAAT+AGG | + | chr3_3:80178633-80178652 | None:intergenic | 30.0% | |
| ! | AAAGACTTTTACCTTTCTGT+GGG | + | chr3_3:80178795-80178814 | None:intergenic | 30.0% |
| TGTGTCTTAAAATTAACGAC+AGG | - | chr3_3:80178872-80178891 | Msa0476370:CDS | 30.0% | |
| GTAATTTGATCTGCTTCAAA+AGG | + | chr3_3:80178905-80178924 | None:intergenic | 30.0% | |
| ! | ATAAATCTGCTAGTGTTGTT+GGG | + | chr3_3:80177110-80177129 | None:intergenic | 30.0% |
| ! | CAAGTCCATAGTAATTTTCT+TGG | + | chr3_3:80177263-80177282 | None:intergenic | 30.0% |
| CAAGAAAATTACTATGGACT+TGG | - | chr3_3:80177261-80177280 | Msa0476370:intron | 30.0% | |
| ! | CTTGGTGGTAGTAATAATAA+TGG | - | chr3_3:80177288-80177307 | Msa0476370:intron | 30.0% |
| GGCAATACATTGGAATTAAA+TGG | + | chr3_3:80177321-80177340 | None:intergenic | 30.0% | |
| ! | TGAAACATTTTCTGTTCCAA+TGG | - | chr3_3:80177563-80177582 | Msa0476370:intron | 30.0% |
| TCATATTGATCTTGAACCAT+TGG | + | chr3_3:80177582-80177601 | None:intergenic | 30.0% | |
| TGACAACAACTGCAAAAATA+CGG | + | chr3_3:80177771-80177790 | None:intergenic | 30.0% | |
| TTTGAAAAGCTTGAGATTCA+TGG | - | chr3_3:80177936-80177955 | Msa0476370:intron | 30.0% | |
| TGTAGTACTATACTAAGACT+TGG | + | chr3_3:80178047-80178066 | None:intergenic | 30.0% | |
| GTCTCATAAAATTCAGACAT+TGG | + | chr3_3:80178246-80178265 | None:intergenic | 30.0% | |
| ! | AAAATAATTCAGGTTTGTCC+TGG | - | chr3_3:80178319-80178338 | Msa0476370:CDS | 30.0% |
| ! | TCTTTTCATTCATGTGACAT+TGG | - | chr3_3:80178426-80178445 | Msa0476370:CDS | 30.0% |
| ! | CTTTTCATTCATGTGACATT+GGG | - | chr3_3:80178427-80178446 | Msa0476370:CDS | 30.0% |
| TATGTTTACAGATGAATTGG+TGG | - | chr3_3:80178468-80178487 | Msa0476370:CDS | 30.0% | |
| TTCCTCTGTTCAATACAATA+GGG | + | chr3_3:80178632-80178651 | None:intergenic | 30.0% | |
| TTTCCTCTGTTCAATACAAT+AGG | + | chr3_3:80178633-80178652 | None:intergenic | 30.0% | |
| ! | AAAGACTTTTACCTTTCTGT+GGG | + | chr3_3:80178795-80178814 | None:intergenic | 30.0% |
| TGTGTCTTAAAATTAACGAC+AGG | - | chr3_3:80178872-80178891 | Msa0476370:CDS | 30.0% | |
| GTAATTTGATCTGCTTCAAA+AGG | + | chr3_3:80178905-80178924 | None:intergenic | 30.0% | |
| ATTGAAGAAACTTGGGTCAA+CGG | + | chr3_3:80177079-80177098 | None:intergenic | 35.0% | |
| GATAAATCTGCTAGTGTTGT+TGG | + | chr3_3:80177111-80177130 | None:intergenic | 35.0% | |
| !! | AACTCCATGAAGATTTTGGT+GGG | + | chr3_3:80177196-80177215 | None:intergenic | 35.0% |
| ! | TTCCAACTCCATGAAGATTT+TGG | + | chr3_3:80177200-80177219 | None:intergenic | 35.0% |
| ! | TAGTAATTTTCTTGGGATGG+TGG | + | chr3_3:80177255-80177274 | None:intergenic | 35.0% |
| ! | CCATAGTAATTTTCTTGGGA+TGG | + | chr3_3:80177258-80177277 | None:intergenic | 35.0% |
| CCATCCCAAGAAAATTACTA+TGG | - | chr3_3:80177255-80177274 | Msa0476370:intron | 35.0% | |
| TACTATGGACTTGGAATACT+TGG | - | chr3_3:80177270-80177289 | Msa0476370:intron | 35.0% | |
| ATTCTGTTGTGGCAATACAT+TGG | + | chr3_3:80177331-80177350 | None:intergenic | 35.0% | |
| CATCATATTCAACAACTGCA+TGG | - | chr3_3:80177405-80177424 | Msa0476370:CDS | 35.0% | |
| ! | TGGAATAAATAGCCTTGAAG+TGG | - | chr3_3:80177626-80177645 | Msa0476370:intron | 35.0% |
| ! | ATAAATAGCCTTGAAGTGGA+TGG | - | chr3_3:80177630-80177649 | Msa0476370:intron | 35.0% |
| !! | TTCGGTTTGGTTCAACAAAA+CGG | + | chr3_3:80177712-80177731 | None:intergenic | 35.0% |
| ACAACAACTGCAAAAATACG+GGG | + | chr3_3:80177769-80177788 | None:intergenic | 35.0% | |
| GACAACAACTGCAAAAATAC+GGG | + | chr3_3:80177770-80177789 | None:intergenic | 35.0% | |
| AGAGAAATCATACACACTGA+TGG | - | chr3_3:80177798-80177817 | Msa0476370:CDS | 35.0% | |
| AAAAGCTTGAGATTCATGGA+AGG | - | chr3_3:80177940-80177959 | Msa0476370:intron | 35.0% | |
| ACCATCAGATACCTGTTAAT+GGG | - | chr3_3:80177988-80178007 | Msa0476370:intron | 35.0% | |
| ! | TTTTATGAGACTCTTTGCAC+TGG | - | chr3_3:80178255-80178274 | Msa0476370:intron | 35.0% |
| TACCCTATTGTATTGAACAG+AGG | - | chr3_3:80178627-80178646 | Msa0476370:CDS | 35.0% | |
| ! | CAAGTTTTCTTGAGAACTGT+TGG | + | chr3_3:80178746-80178765 | None:intergenic | 35.0% |
| AAGAAAACTTGTCGTAAAGC+AGG | - | chr3_3:80178755-80178774 | Msa0476370:CDS | 35.0% | |
| AGAAAACTTGTCGTAAAGCA+GGG | - | chr3_3:80178756-80178775 | Msa0476370:CDS | 35.0% | |
| ! | AAGACTTTTACCTTTCTGTG+GGG | + | chr3_3:80178794-80178813 | None:intergenic | 35.0% |
| ! | GAAAGACTTTTACCTTTCTG+TGG | + | chr3_3:80178796-80178815 | None:intergenic | 35.0% |
| TTACTAGCAAATCAATGGGA+AGG | - | chr3_3:80178921-80178940 | Msa0476370:CDS | 35.0% | |
| ATTGAAGAAACTTGGGTCAA+CGG | + | chr3_3:80177079-80177098 | None:intergenic | 35.0% | |
| GATAAATCTGCTAGTGTTGT+TGG | + | chr3_3:80177111-80177130 | None:intergenic | 35.0% | |
| !! | AACTCCATGAAGATTTTGGT+GGG | + | chr3_3:80177196-80177215 | None:intergenic | 35.0% |
| ! | TTCCAACTCCATGAAGATTT+TGG | + | chr3_3:80177200-80177219 | None:intergenic | 35.0% |
| ! | TAGTAATTTTCTTGGGATGG+TGG | + | chr3_3:80177255-80177274 | None:intergenic | 35.0% |
| ! | CCATAGTAATTTTCTTGGGA+TGG | + | chr3_3:80177258-80177277 | None:intergenic | 35.0% |
| CCATCCCAAGAAAATTACTA+TGG | - | chr3_3:80177255-80177274 | Msa0476370:intron | 35.0% | |
| TACTATGGACTTGGAATACT+TGG | - | chr3_3:80177270-80177289 | Msa0476370:intron | 35.0% | |
| ATTCTGTTGTGGCAATACAT+TGG | + | chr3_3:80177331-80177350 | None:intergenic | 35.0% | |
| CATCATATTCAACAACTGCA+TGG | - | chr3_3:80177405-80177424 | Msa0476370:CDS | 35.0% | |
| ! | TGGAATAAATAGCCTTGAAG+TGG | - | chr3_3:80177626-80177645 | Msa0476370:intron | 35.0% |
| ! | ATAAATAGCCTTGAAGTGGA+TGG | - | chr3_3:80177630-80177649 | Msa0476370:intron | 35.0% |
| !! | TTCGGTTTGGTTCAACAAAA+CGG | + | chr3_3:80177712-80177731 | None:intergenic | 35.0% |
| ACAACAACTGCAAAAATACG+GGG | + | chr3_3:80177769-80177788 | None:intergenic | 35.0% | |
| GACAACAACTGCAAAAATAC+GGG | + | chr3_3:80177770-80177789 | None:intergenic | 35.0% | |
| AGAGAAATCATACACACTGA+TGG | - | chr3_3:80177798-80177817 | Msa0476370:CDS | 35.0% | |
| AAAAGCTTGAGATTCATGGA+AGG | - | chr3_3:80177940-80177959 | Msa0476370:intron | 35.0% | |
| ACCATCAGATACCTGTTAAT+GGG | - | chr3_3:80177988-80178007 | Msa0476370:intron | 35.0% | |
| ! | TTTTATGAGACTCTTTGCAC+TGG | - | chr3_3:80178255-80178274 | Msa0476370:intron | 35.0% |
| TACCCTATTGTATTGAACAG+AGG | - | chr3_3:80178627-80178646 | Msa0476370:CDS | 35.0% | |
| ! | CAAGTTTTCTTGAGAACTGT+TGG | + | chr3_3:80178746-80178765 | None:intergenic | 35.0% |
| AAGAAAACTTGTCGTAAAGC+AGG | - | chr3_3:80178755-80178774 | Msa0476370:CDS | 35.0% | |
| AGAAAACTTGTCGTAAAGCA+GGG | - | chr3_3:80178756-80178775 | Msa0476370:CDS | 35.0% | |
| ! | AAGACTTTTACCTTTCTGTG+GGG | + | chr3_3:80178794-80178813 | None:intergenic | 35.0% |
| ! | GAAAGACTTTTACCTTTCTG+TGG | + | chr3_3:80178796-80178815 | None:intergenic | 35.0% |
| TTACTAGCAAATCAATGGGA+AGG | - | chr3_3:80178921-80178940 | Msa0476370:CDS | 35.0% | |
| !! | ACTCCATGAAGATTTTGGTG+GGG | + | chr3_3:80177195-80177214 | None:intergenic | 40.0% |
| ! | CAACTCCATGAAGATTTTGG+TGG | + | chr3_3:80177197-80177216 | None:intergenic | 40.0% |
| CACCAAAATCTTCATGGAGT+TGG | - | chr3_3:80177195-80177214 | Msa0476370:intron | 40.0% | |
| TATGGACTTGGAATACTTGG+TGG | - | chr3_3:80177273-80177292 | Msa0476370:intron | 40.0% | |
| TTACCACTCTGATTCTGTTG+TGG | + | chr3_3:80177342-80177361 | None:intergenic | 40.0% | |
| CATATTCAACAACTGCATGG+TGG | - | chr3_3:80177408-80177427 | Msa0476370:CDS | 40.0% | |
| CCTGACCTTGTTGAATATCA+TGG | + | chr3_3:80177455-80177474 | None:intergenic | 40.0% | |
| CCATGATATTCAACAAGGTC+AGG | - | chr3_3:80177452-80177471 | Msa0476370:intron | 40.0% | |
| GATATTCAACAAGGTCAGGA+TGG | - | chr3_3:80177456-80177475 | Msa0476370:intron | 40.0% | |
| CACCATGATGTACAACAACA+TGG | - | chr3_3:80177519-80177538 | Msa0476370:intron | 40.0% | |
| GTCCATGTTGTTGTACATCA+TGG | + | chr3_3:80177524-80177543 | None:intergenic | 40.0% | |
| GATGTACAACAACATGGACA+TGG | - | chr3_3:80177525-80177544 | Msa0476370:intron | 40.0% | |
| ATGAACTACCATCCACTTCA+AGG | + | chr3_3:80177641-80177660 | None:intergenic | 40.0% | |
| AAAACGGGAATCTGAATTGC+AGG | + | chr3_3:80177696-80177715 | None:intergenic | 40.0% | |
| !! | TCGGTTTGGTTCAACAAAAC+GGG | + | chr3_3:80177711-80177730 | None:intergenic | 40.0% |
| CAAAAATACGGGGTTACTGT+GGG | + | chr3_3:80177759-80177778 | None:intergenic | 40.0% | |
| CACCATCAGATACCTGTTAA+TGG | - | chr3_3:80177987-80178006 | Msa0476370:intron | 40.0% | |
| CCATCAGATACCTGTTAATG+GGG | - | chr3_3:80177989-80178008 | Msa0476370:intron | 40.0% | |
| ! | AGTTTTTGTGGGAAAAGCCT+TGG | - | chr3_3:80178150-80178169 | Msa0476370:CDS | 40.0% |
| !!! | TTTTTTGGCACAGTACTGTG+TGG | - | chr3_3:80178185-80178204 | Msa0476370:intron | 40.0% |
| GACATTGGGTTAAGTTTGAG+TGG | - | chr3_3:80178441-80178460 | Msa0476370:CDS | 40.0% | |
| CAAGAGCAAATGGGTGATAA+TGG | - | chr3_3:80178493-80178512 | Msa0476370:CDS | 40.0% | |
| ! | TGATCTGCTGCTTCATCAAT+AGG | + | chr3_3:80178704-80178723 | None:intergenic | 40.0% |
| !! | ACTCCATGAAGATTTTGGTG+GGG | + | chr3_3:80177195-80177214 | None:intergenic | 40.0% |
| ! | CAACTCCATGAAGATTTTGG+TGG | + | chr3_3:80177197-80177216 | None:intergenic | 40.0% |
| CACCAAAATCTTCATGGAGT+TGG | - | chr3_3:80177195-80177214 | Msa0476370:intron | 40.0% | |
| TATGGACTTGGAATACTTGG+TGG | - | chr3_3:80177273-80177292 | Msa0476370:intron | 40.0% | |
| TTACCACTCTGATTCTGTTG+TGG | + | chr3_3:80177342-80177361 | None:intergenic | 40.0% | |
| CATATTCAACAACTGCATGG+TGG | - | chr3_3:80177408-80177427 | Msa0476370:CDS | 40.0% | |
| CCTGACCTTGTTGAATATCA+TGG | + | chr3_3:80177455-80177474 | None:intergenic | 40.0% | |
| CCATGATATTCAACAAGGTC+AGG | - | chr3_3:80177452-80177471 | Msa0476370:intron | 40.0% | |
| GATATTCAACAAGGTCAGGA+TGG | - | chr3_3:80177456-80177475 | Msa0476370:intron | 40.0% | |
| CACCATGATGTACAACAACA+TGG | - | chr3_3:80177519-80177538 | Msa0476370:intron | 40.0% | |
| GTCCATGTTGTTGTACATCA+TGG | + | chr3_3:80177524-80177543 | None:intergenic | 40.0% | |
| GATGTACAACAACATGGACA+TGG | - | chr3_3:80177525-80177544 | Msa0476370:intron | 40.0% | |
| ATGAACTACCATCCACTTCA+AGG | + | chr3_3:80177641-80177660 | None:intergenic | 40.0% | |
| AAAACGGGAATCTGAATTGC+AGG | + | chr3_3:80177696-80177715 | None:intergenic | 40.0% | |
| !! | TCGGTTTGGTTCAACAAAAC+GGG | + | chr3_3:80177711-80177730 | None:intergenic | 40.0% |
| CAAAAATACGGGGTTACTGT+GGG | + | chr3_3:80177759-80177778 | None:intergenic | 40.0% | |
| CACCATCAGATACCTGTTAA+TGG | - | chr3_3:80177987-80178006 | Msa0476370:intron | 40.0% | |
| CCATCAGATACCTGTTAATG+GGG | - | chr3_3:80177989-80178008 | Msa0476370:intron | 40.0% | |
| ! | AGTTTTTGTGGGAAAAGCCT+TGG | - | chr3_3:80178150-80178169 | Msa0476370:CDS | 40.0% |
| !!! | TTTTTTGGCACAGTACTGTG+TGG | - | chr3_3:80178185-80178204 | Msa0476370:intron | 40.0% |
| GACATTGGGTTAAGTTTGAG+TGG | - | chr3_3:80178441-80178460 | Msa0476370:CDS | 40.0% | |
| CAAGAGCAAATGGGTGATAA+TGG | - | chr3_3:80178493-80178512 | Msa0476370:CDS | 40.0% | |
| ! | TGATCTGCTGCTTCATCAAT+AGG | + | chr3_3:80178704-80178723 | None:intergenic | 40.0% |
| !!! | ATTTTCTTGGGATGGTGGAG+TGG | + | chr3_3:80177250-80177269 | None:intergenic | 45.0% |
| TTGCCACAACAGAATCAGAG+TGG | - | chr3_3:80177336-80177355 | Msa0476370:CDS | 45.0% | |
| CAACAACATGGACATGGACA+TGG | - | chr3_3:80177531-80177550 | Msa0476370:intron | 45.0% | |
| TGTTGAACCAAACCGAACTG+CGG | - | chr3_3:80177715-80177734 | Msa0476370:intron | 45.0% | |
| TTGATTAAGTGCCCGCAGTT+CGG | + | chr3_3:80177730-80177749 | None:intergenic | 45.0% | |
| AACTGCGGGCACTTAATCAA+TGG | - | chr3_3:80177730-80177749 | Msa0476370:intron | 45.0% | |
| GCAAAAATACGGGGTTACTG+TGG | + | chr3_3:80177760-80177779 | None:intergenic | 45.0% | |
| GCTTGAGATTCATGGAAGGT+TGG | - | chr3_3:80177944-80177963 | Msa0476370:intron | 45.0% | |
| CCCCATTAACAGGTATCTGA+TGG | + | chr3_3:80177992-80178011 | None:intergenic | 45.0% | |
| TGTGTGGAACGTCATTTAGC+AGG | - | chr3_3:80178201-80178220 | Msa0476370:intron | 45.0% | |
| TGAGACTCTTTGCACTGGAT+TGG | - | chr3_3:80178260-80178279 | Msa0476370:intron | 45.0% | |
| ! | CTCTTTGCACTGGATTGGAT+TGG | - | chr3_3:80178265-80178284 | Msa0476370:intron | 45.0% |
| GTTTGTCCTGGAAATCACGA+CGG | - | chr3_3:80178331-80178350 | Msa0476370:CDS | 45.0% | |
| ATTGGTGGAGCAAGAGCAAA+TGG | - | chr3_3:80178483-80178502 | Msa0476370:CDS | 45.0% | |
| TTGGTGGAGCAAGAGCAAAT+GGG | - | chr3_3:80178484-80178503 | Msa0476370:CDS | 45.0% | |
| !! | ACTTGTTCTGAGAGGTTCCT+AGG | + | chr3_3:80178523-80178542 | None:intergenic | 45.0% |
| AGCAAATCAATGGGAAGGAC+AGG | - | chr3_3:80178926-80178945 | Msa0476370:CDS | 45.0% | |
| !!! | ATTTTCTTGGGATGGTGGAG+TGG | + | chr3_3:80177250-80177269 | None:intergenic | 45.0% |
| TTGCCACAACAGAATCAGAG+TGG | - | chr3_3:80177336-80177355 | Msa0476370:CDS | 45.0% | |
| CAACAACATGGACATGGACA+TGG | - | chr3_3:80177531-80177550 | Msa0476370:intron | 45.0% | |
| TGTTGAACCAAACCGAACTG+CGG | - | chr3_3:80177715-80177734 | Msa0476370:intron | 45.0% | |
| TTGATTAAGTGCCCGCAGTT+CGG | + | chr3_3:80177730-80177749 | None:intergenic | 45.0% | |
| AACTGCGGGCACTTAATCAA+TGG | - | chr3_3:80177730-80177749 | Msa0476370:intron | 45.0% | |
| GCAAAAATACGGGGTTACTG+TGG | + | chr3_3:80177760-80177779 | None:intergenic | 45.0% | |
| GCTTGAGATTCATGGAAGGT+TGG | - | chr3_3:80177944-80177963 | Msa0476370:intron | 45.0% | |
| CCCCATTAACAGGTATCTGA+TGG | + | chr3_3:80177992-80178011 | None:intergenic | 45.0% | |
| TGTGTGGAACGTCATTTAGC+AGG | - | chr3_3:80178201-80178220 | Msa0476370:intron | 45.0% | |
| TGAGACTCTTTGCACTGGAT+TGG | - | chr3_3:80178260-80178279 | Msa0476370:intron | 45.0% | |
| ! | CTCTTTGCACTGGATTGGAT+TGG | - | chr3_3:80178265-80178284 | Msa0476370:intron | 45.0% |
| GTTTGTCCTGGAAATCACGA+CGG | - | chr3_3:80178331-80178350 | Msa0476370:CDS | 45.0% | |
| ATTGGTGGAGCAAGAGCAAA+TGG | - | chr3_3:80178483-80178502 | Msa0476370:CDS | 45.0% | |
| TTGGTGGAGCAAGAGCAAAT+GGG | - | chr3_3:80178484-80178503 | Msa0476370:CDS | 45.0% | |
| !! | ACTTGTTCTGAGAGGTTCCT+AGG | + | chr3_3:80178523-80178542 | None:intergenic | 45.0% |
| AGCAAATCAATGGGAAGGAC+AGG | - | chr3_3:80178926-80178945 | Msa0476370:CDS | 45.0% | |
| !! | TATTTATTTGAATTATTTAT+AGG | - | chr3_3:80177906-80177925 | Msa0476370:CDS | 5.0% |
| !! | TATTTATTTGAATTATTTAT+AGG | - | chr3_3:80177906-80177925 | Msa0476370:CDS | 5.0% |
| ! | GTTTGTTGGGACAGTGCAGT+GGG | + | chr3_3:80177162-80177181 | None:intergenic | 50.0% |
| !! | AGTTTGTTGGGACAGTGCAG+TGG | + | chr3_3:80177163-80177182 | None:intergenic | 50.0% |
| CTGCACTGTCCCAACAAACT+CGG | - | chr3_3:80177163-80177182 | Msa0476370:CDS | 50.0% | |
| GGACCCCACCAAAATCTTCA+TGG | - | chr3_3:80177189-80177208 | Msa0476370:CDS | 50.0% | |
| GTTGAACCAAACCGAACTGC+GGG | - | chr3_3:80177716-80177735 | Msa0476370:intron | 50.0% | |
| AAATACGGGGTTACTGTGGG+TGG | + | chr3_3:80177756-80177775 | None:intergenic | 50.0% | |
| ! | CCTTTTCCGTCGTGATTTCC+AGG | + | chr3_3:80178340-80178359 | None:intergenic | 50.0% |
| CCTGGAAATCACGACGGAAA+AGG | - | chr3_3:80178337-80178356 | Msa0476370:CDS | 50.0% | |
| !! | TGGGTGATAATGGAACGCCT+AGG | - | chr3_3:80178503-80178522 | Msa0476370:CDS | 50.0% |
| GTAAAGCAGGGTTACCCAGA+TGG | - | chr3_3:80178768-80178787 | Msa0476370:CDS | 50.0% | |
| ATGGGAAGGACAGGATACAG+AGG | - | chr3_3:80178935-80178954 | Msa0476370:CDS | 50.0% | |
| AAGGACAGGATACAGAGGCA+AGG | - | chr3_3:80178940-80178959 | Msa0476370:CDS | 50.0% | |
| AGGACAGGATACAGAGGCAA+GGG | - | chr3_3:80178941-80178960 | Msa0476370:CDS | 50.0% | |
| ! | GTTTGTTGGGACAGTGCAGT+GGG | + | chr3_3:80177162-80177181 | None:intergenic | 50.0% |
| !! | AGTTTGTTGGGACAGTGCAG+TGG | + | chr3_3:80177163-80177182 | None:intergenic | 50.0% |
| CTGCACTGTCCCAACAAACT+CGG | - | chr3_3:80177163-80177182 | Msa0476370:CDS | 50.0% | |
| GGACCCCACCAAAATCTTCA+TGG | - | chr3_3:80177189-80177208 | Msa0476370:CDS | 50.0% | |
| GTTGAACCAAACCGAACTGC+GGG | - | chr3_3:80177716-80177735 | Msa0476370:intron | 50.0% | |
| AAATACGGGGTTACTGTGGG+TGG | + | chr3_3:80177756-80177775 | None:intergenic | 50.0% | |
| ! | CCTTTTCCGTCGTGATTTCC+AGG | + | chr3_3:80178340-80178359 | None:intergenic | 50.0% |
| CCTGGAAATCACGACGGAAA+AGG | - | chr3_3:80178337-80178356 | Msa0476370:CDS | 50.0% | |
| !! | TGGGTGATAATGGAACGCCT+AGG | - | chr3_3:80178503-80178522 | Msa0476370:CDS | 50.0% |
| GTAAAGCAGGGTTACCCAGA+TGG | - | chr3_3:80178768-80178787 | Msa0476370:CDS | 50.0% | |
| ATGGGAAGGACAGGATACAG+AGG | - | chr3_3:80178935-80178954 | Msa0476370:CDS | 50.0% | |
| AAGGACAGGATACAGAGGCA+AGG | - | chr3_3:80178940-80178959 | Msa0476370:CDS | 50.0% | |
| AGGACAGGATACAGAGGCAA+GGG | - | chr3_3:80178941-80178960 | Msa0476370:CDS | 50.0% | |
| CTGTCCCAACAAACTCGGCA+TGG | - | chr3_3:80177168-80177187 | Msa0476370:CDS | 55.0% | |
| ! | GGGTCCATGCCGAGTTTGTT+GGG | + | chr3_3:80177175-80177194 | None:intergenic | 55.0% |
| TAAGTGCCCGCAGTTCGGTT+TGG | + | chr3_3:80177725-80177744 | None:intergenic | 55.0% | |
| ACTGATGGGGCCCCATTAAC+AGG | + | chr3_3:80178002-80178021 | None:intergenic | 55.0% | |
| ACCTTTCTGTGGGGCCATCT+GGG | + | chr3_3:80178785-80178804 | None:intergenic | 55.0% | |
| TACCTTTCTGTGGGGCCATC+TGG | + | chr3_3:80178786-80178805 | None:intergenic | 55.0% | |
| AGGATACAGAGGCAAGGGCA+AGG | - | chr3_3:80178946-80178965 | Msa0476370:CDS | 55.0% | |
| AGGCAAGGGCAAGGACTGAA+GGG | - | chr3_3:80178955-80178974 | Msa0476370:CDS | 55.0% | |
| GCGATGTCATACAACGCGGT+TGG | + | chr3_3:80179032-80179051 | None:intergenic | 55.0% | |
| CTGTCCCAACAAACTCGGCA+TGG | - | chr3_3:80177168-80177187 | Msa0476370:CDS | 55.0% | |
| ! | GGGTCCATGCCGAGTTTGTT+GGG | + | chr3_3:80177175-80177194 | None:intergenic | 55.0% |
| TAAGTGCCCGCAGTTCGGTT+TGG | + | chr3_3:80177725-80177744 | None:intergenic | 55.0% | |
| ACTGATGGGGCCCCATTAAC+AGG | + | chr3_3:80178002-80178021 | None:intergenic | 55.0% | |
| ACCTTTCTGTGGGGCCATCT+GGG | + | chr3_3:80178785-80178804 | None:intergenic | 55.0% | |
| TACCTTTCTGTGGGGCCATC+TGG | + | chr3_3:80178786-80178805 | None:intergenic | 55.0% | |
| AGGATACAGAGGCAAGGGCA+AGG | - | chr3_3:80178946-80178965 | Msa0476370:CDS | 55.0% | |
| AGGCAAGGGCAAGGACTGAA+GGG | - | chr3_3:80178955-80178974 | Msa0476370:CDS | 55.0% | |
| GCGATGTCATACAACGCGGT+TGG | + | chr3_3:80179032-80179051 | None:intergenic | 55.0% | |
| GGGGTCCATGCCGAGTTTGT+TGG | + | chr3_3:80177176-80177195 | None:intergenic | 60.0% | |
| ACCCAGATGGCCCCACAGAA+AGG | - | chr3_3:80178781-80178800 | Msa0476370:CDS | 60.0% | |
| GAGGCAAGGGCAAGGACTGA+AGG | - | chr3_3:80178954-80178973 | Msa0476370:CDS | 60.0% | |
| GGCAAGGGCAAGGACTGAAG+GGG | - | chr3_3:80178956-80178975 | Msa0476370:CDS | 60.0% | |
| GGCGGCGATGTCATACAACG+CGG | + | chr3_3:80179036-80179055 | None:intergenic | 60.0% | |
| GGGGTCCATGCCGAGTTTGT+TGG | + | chr3_3:80177176-80177195 | None:intergenic | 60.0% | |
| ACCCAGATGGCCCCACAGAA+AGG | - | chr3_3:80178781-80178800 | Msa0476370:CDS | 60.0% | |
| GAGGCAAGGGCAAGGACTGA+AGG | - | chr3_3:80178954-80178973 | Msa0476370:CDS | 60.0% | |
| GGCAAGGGCAAGGACTGAAG+GGG | - | chr3_3:80178956-80178975 | Msa0476370:CDS | 60.0% | |
| GGCGGCGATGTCATACAACG+CGG | + | chr3_3:80179036-80179055 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 80177036 | 80179070 | 80177036 | ID=Msa0476370;Name=Msa0476370 |
| chr3_3 | mRNA | 80177036 | 80179070 | 80177036 | ID=Msa0476370-mRNA-1;Parent=Msa0476370;Name=Msa0476370-mRNA-1;_AED=0.05;_eAED=0.07;_QI=0|0|0|1|1|1|6|0|488 |
| chr3_3 | exon | 80178287 | 80179070 | 80178287 | ID=Msa0476370-mRNA-1:exon:21875;Parent=Msa0476370-mRNA-1 |
| chr3_3 | exon | 80178070 | 80178178 | 80178070 | ID=Msa0476370-mRNA-1:exon:21874;Parent=Msa0476370-mRNA-1 |
| chr3_3 | exon | 80177776 | 80177954 | 80177776 | ID=Msa0476370-mRNA-1:exon:21873;Parent=Msa0476370-mRNA-1 |
| chr3_3 | exon | 80177566 | 80177627 | 80177566 | ID=Msa0476370-mRNA-1:exon:21872;Parent=Msa0476370-mRNA-1 |
| chr3_3 | exon | 80177304 | 80177459 | 80177304 | ID=Msa0476370-mRNA-1:exon:21871;Parent=Msa0476370-mRNA-1 |
| chr3_3 | exon | 80177036 | 80177212 | 80177036 | ID=Msa0476370-mRNA-1:exon:21870;Parent=Msa0476370-mRNA-1 |
| chr3_3 | CDS | 80178287 | 80179070 | 80178287 | ID=Msa0476370-mRNA-1:cds;Parent=Msa0476370-mRNA-1 |
| chr3_3 | CDS | 80178070 | 80178178 | 80178070 | ID=Msa0476370-mRNA-1:cds;Parent=Msa0476370-mRNA-1 |
| chr3_3 | CDS | 80177776 | 80177954 | 80177776 | ID=Msa0476370-mRNA-1:cds;Parent=Msa0476370-mRNA-1 |
| chr3_3 | CDS | 80177566 | 80177627 | 80177566 | ID=Msa0476370-mRNA-1:cds;Parent=Msa0476370-mRNA-1 |
| chr3_3 | CDS | 80177304 | 80177459 | 80177304 | ID=Msa0476370-mRNA-1:cds;Parent=Msa0476370-mRNA-1 |
| chr3_3 | CDS | 80177036 | 80177212 | 80177036 | ID=Msa0476370-mRNA-1:cds;Parent=Msa0476370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
