Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483930 | RHN43992.1 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 1.65e-165 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483930 | A0A396GS93 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 7.89e-166 | 471 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0483930 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483930 | MtrunA17_Chr7g0214511 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 1.52e-169 | 471 |
| Msa0483930 | MtrunA17_Chr1g0174001 | 60.309 | 194 | 58 | 8 | 118 | 302 | 12 | 195 | 1.88e-63 | 198 |
| Msa0483930 | MtrunA17_Chr1g0169521 | 49.808 | 261 | 83 | 9 | 60 | 302 | 86 | 316 | 1.53e-61 | 197 |
| Msa0483930 | MtrunA17_Chr1g0169561 | 49.624 | 266 | 83 | 12 | 56 | 302 | 83 | 316 | 4.21e-60 | 194 |
| Msa0483930 | MtrunA17_Chr1g0193731 | 47.576 | 330 | 81 | 17 | 16 | 302 | 15 | 295 | 2.63e-58 | 189 |
| Msa0483930 | MtrunA17_Chr1g0180581 | 44.444 | 288 | 84 | 11 | 15 | 302 | 9 | 220 | 4.40e-51 | 167 |
| Msa0483930 | MtrunA17_Chr1g0174871 | 35.907 | 259 | 121 | 11 | 72 | 301 | 42 | 284 | 1.83e-22 | 94.7 |
| Msa0483930 | MtrunA17_Chr1g0174861 | 37.363 | 182 | 88 | 9 | 93 | 268 | 63 | 224 | 2.10e-20 | 88.2 |
| Msa0483930 | MtrunA17_Chr1g0180571 | 78.431 | 51 | 11 | 0 | 247 | 297 | 22 | 72 | 3.71e-19 | 82.0 |
| Msa0483930 | MtrunA17_Chr1g0172861 | 35.055 | 271 | 102 | 15 | 72 | 302 | 42 | 278 | 1.54e-16 | 78.2 |
| Msa0483930 | MtrunA17_Chr1g0172961 | 32.411 | 253 | 101 | 13 | 72 | 284 | 42 | 264 | 1.75e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 48 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAGGTGTTACTGAATT+AGG | 0.100666 | 3_4:-782837 | Msa0483930:CDS |
| TGAATCACCGTGGCGCTAAA+AGG | 0.215611 | 3_4:-783085 | Msa0483930:CDS |
| TCGACGCGGCCGGCGTTTCT+TGG | 0.252455 | 3_4:+783211 | None:intergenic |
| TTCTTGGTGTTGTAGAATAT+TGG | 0.276502 | 3_4:+783227 | None:intergenic |
| CTCTTCAATAGCATGATTAG+AGG | 0.355993 | 3_4:+782869 | None:intergenic |
| ATGAAGGTGTTACTGAATTA+GGG | 0.357850 | 3_4:-782836 | Msa0483930:CDS |
| TTCTGTTCTTGGTAATCATA+AGG | 0.363019 | 3_4:-783429 | Msa0483930:CDS |
| ATCGCTCCCTTCAAAATTCC+AGG | 0.381362 | 3_4:-783580 | Msa0483930:CDS |
| CAAAGCATTGAATGGACATA+AGG | 0.388435 | 3_4:-783324 | Msa0483930:CDS |
| TATATCTCGCGGAGGTTATG+AGG | 0.390309 | 3_4:-783129 | Msa0483930:CDS |
| AGTACTTTGAACAGTCAATA+TGG | 0.393472 | 3_4:+783255 | None:intergenic |
| AAAACTTTCTTGCAATATGA+TGG | 0.405590 | 3_4:-783060 | Msa0483930:CDS |
| GCATCATTAGTTGTTGAAGA+TGG | 0.412853 | 3_4:+783500 | None:intergenic |
| ACTTCTAACAAAGCATTGAA+TGG | 0.414800 | 3_4:-783332 | Msa0483930:CDS |
| ATAGCATGATTAGAGGTAGA+AGG | 0.440842 | 3_4:+782876 | None:intergenic |
| GAAGATGGTGGTGCAGTTTG+TGG | 0.454649 | 3_4:+783290 | None:intergenic |
| GAATAGGGTTTGAGTAATCA+AGG | 0.456225 | 3_4:+783540 | None:intergenic |
| AAAGCATTGAATGGACATAA+GGG | 0.470952 | 3_4:-783323 | Msa0483930:CDS |
| TTCTTCTTCTTCGACGCGGC+CGG | 0.486419 | 3_4:+783201 | None:intergenic |
| GAATCACCGTGGCGCTAAAA+GGG | 0.488695 | 3_4:-783084 | Msa0483930:CDS |
| TAATCAAGGAAACGGAAAGA+AGG | 0.496330 | 3_4:+783554 | None:intergenic |
| GTCAATATGGCTCTGTTCAA+AGG | 0.497478 | 3_4:+783268 | None:intergenic |
| TCTTCAACAACTAATGATGC+TGG | 0.499426 | 3_4:-783497 | Msa0483930:CDS |
| GGAGCGATGATAAACATCAT+TGG | 0.502169 | 3_4:+783595 | None:intergenic |
| GAAGAGAAGAAGATTAATGA+AGG | 0.510676 | 3_4:-782852 | Msa0483930:CDS |
| TCAAACATCACAAGATTGCA+AGG | 0.513757 | 3_4:-782901 | Msa0483930:CDS |
| CTCATGTGATGTTTGCAACA+AGG | 0.516766 | 3_4:-783360 | Msa0483930:CDS |
| TTGGTGTTGTAGAATATTGG+CGG | 0.527171 | 3_4:+783230 | None:intergenic |
| TTGAGGTTCAAGATTCCTAA+AGG | 0.528982 | 3_4:-782933 | Msa0483930:CDS |
| AAGATGGTGGTGCAGTTTGT+GGG | 0.535375 | 3_4:+783291 | None:intergenic |
| GAAACGGAAAGAAGGGTACC+TGG | 0.540917 | 3_4:+783562 | None:intergenic |
| TAGCCACAATGAAAAGAAGT+TGG | 0.545096 | 3_4:-782958 | Msa0483930:CDS |
| GGTTTGAGTAATCAAGGAAA+CGG | 0.550662 | 3_4:+783546 | None:intergenic |
| TTTGGTTCATGATCATGAGA+AGG | 0.562074 | 3_4:+783620 | None:intergenic |
| TCATGATCATGAGAAGGAGA+TGG | 0.576941 | 3_4:+783626 | None:intergenic |
| TGGCTCTGTTCAAAGGAAGA+TGG | 0.582600 | 3_4:+783275 | None:intergenic |
| AATCAAGGAAACGGAAAGAA+GGG | 0.583538 | 3_4:+783555 | None:intergenic |
| TCATCTTCAAAATCATCACT+TGG | 0.584649 | 3_4:+782777 | None:intergenic |
| CAAGGTGTGTTTCTAACAAG+TGG | 0.594003 | 3_4:-783008 | Msa0483930:CDS |
| ATGAAAAGAAGTTGGTGTTG+AGG | 0.594249 | 3_4:-782950 | Msa0483930:CDS |
| ACAACGTGAAGAAGATCGTA+TGG | 0.595118 | 3_4:-783463 | Msa0483930:CDS |
| ATATCTCGCGGAGGTTATGA+GGG | 0.614101 | 3_4:-783128 | Msa0483930:CDS |
| ACTTTGTTGCATATATCTCG+CGG | 0.675938 | 3_4:-783140 | Msa0483930:CDS |
| TCTACAACACCAAGAAACGC+CGG | 0.683622 | 3_4:-783220 | Msa0483930:CDS |
| TATCTTCTTCTTCTTCGACG+CGG | 0.720402 | 3_4:+783197 | None:intergenic |
| CTCTGTTCAAAGGAAGATGG+TGG | 0.725506 | 3_4:+783278 | None:intergenic |
| TTGTTGCATATATCTCGCGG+AGG | 0.742758 | 3_4:-783137 | Msa0483930:CDS |
| AATATCGATGTGAATCACCG+TGG | 0.797456 | 3_4:-783095 | Msa0483930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr3_4:782980-782999 | Msa0483930:CDS | 20.0% |
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr3_4:782980-782999 | Msa0483930:CDS | 20.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr3_4:782821-782840 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr3_4:782898-782917 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr3_4:782899-782918 | None:intergenic | 25.0% |
| ! | AAAACTTTCTTGCAATATGA+TGG | - | chr3_4:783360-783379 | Msa0483930:CDS | 25.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr3_4:782821-782840 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr3_4:782898-782917 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr3_4:782899-782918 | None:intergenic | 25.0% |
| ! | AAAACTTTCTTGCAATATGA+TGG | - | chr3_4:783360-783379 | Msa0483930:CDS | 25.0% |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr3_4:782991-783010 | Msa0483930:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr3_4:783088-783107 | Msa0483930:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr3_4:783097-783116 | Msa0483930:CDS | 30.0% |
| AGTACTTTGAACAGTCAATA+TGG | + | chr3_4:783168-783187 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr3_4:783196-783215 | None:intergenic | 30.0% |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr3_4:783505-783524 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr3_4:783568-783587 | Msa0483930:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr3_4:783583-783602 | Msa0483930:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr3_4:783584-783603 | Msa0483930:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr3_4:783646-783665 | None:intergenic | 30.0% | |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr3_4:782991-783010 | Msa0483930:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr3_4:783088-783107 | Msa0483930:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr3_4:783097-783116 | Msa0483930:CDS | 30.0% |
| AGTACTTTGAACAGTCAATA+TGG | + | chr3_4:783168-783187 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr3_4:783196-783215 | None:intergenic | 30.0% |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr3_4:783505-783524 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr3_4:783568-783587 | Msa0483930:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr3_4:783583-783602 | Msa0483930:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr3_4:783584-783603 | Msa0483930:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr3_4:783646-783665 | None:intergenic | 30.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr3_4:782803-782822 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr3_4:782868-782887 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr3_4:782869-782888 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr3_4:782877-782896 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr3_4:782883-782902 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr3_4:782923-782942 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr3_4:782923-782942 | Msa0483930:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr3_4:783096-783115 | Msa0483930:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr3_4:783193-783212 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr3_4:783280-783299 | Msa0483930:CDS | 35.0% | |
| TGATGAGAAGAAGAAGAAGA+AGG | - | chr3_4:783387-783406 | Msa0483930:CDS | 35.0% | |
| AAGAAGAAGAAGAAGGAACA+AGG | - | chr3_4:783394-783413 | Msa0483930:CDS | 35.0% | |
| TAGCCACAATGAAAAGAAGT+TGG | - | chr3_4:783462-783481 | Msa0483930:CDS | 35.0% | |
| ! | ACACCAACTTCTTTTCATTG+TGG | + | chr3_4:783468-783487 | None:intergenic | 35.0% |
| !! | ATGAAAAGAAGTTGGTGTTG+AGG | - | chr3_4:783470-783489 | Msa0483930:CDS | 35.0% |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr3_4:783487-783506 | Msa0483930:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr3_4:783519-783538 | Msa0483930:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr3_4:783547-783566 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr3_4:783554-783573 | None:intergenic | 35.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr3_4:782803-782822 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr3_4:782868-782887 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr3_4:782869-782888 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr3_4:782877-782896 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr3_4:782883-782902 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr3_4:782923-782942 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr3_4:782923-782942 | Msa0483930:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr3_4:783096-783115 | Msa0483930:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr3_4:783193-783212 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr3_4:783280-783299 | Msa0483930:CDS | 35.0% | |
| TGATGAGAAGAAGAAGAAGA+AGG | - | chr3_4:783387-783406 | Msa0483930:CDS | 35.0% | |
| AAGAAGAAGAAGAAGGAACA+AGG | - | chr3_4:783394-783413 | Msa0483930:CDS | 35.0% | |
| TAGCCACAATGAAAAGAAGT+TGG | - | chr3_4:783462-783481 | Msa0483930:CDS | 35.0% | |
| ! | ACACCAACTTCTTTTCATTG+TGG | + | chr3_4:783468-783487 | None:intergenic | 35.0% |
| !! | ATGAAAAGAAGTTGGTGTTG+AGG | - | chr3_4:783470-783489 | Msa0483930:CDS | 35.0% |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr3_4:783487-783506 | Msa0483930:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr3_4:783519-783538 | Msa0483930:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr3_4:783547-783566 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr3_4:783554-783573 | None:intergenic | 35.0% | |
| TCATGATCATGAGAAGGAGA+TGG | + | chr3_4:782797-782816 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr3_4:782828-782847 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr3_4:782849-782868 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr3_4:782850-782869 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr3_4:782957-782976 | Msa0483930:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr3_4:783060-783079 | Msa0483930:CDS | 40.0% | |
| ! | GTCAATATGGCTCTGTTCAA+AGG | + | chr3_4:783155-783174 | None:intergenic | 40.0% |
| TATCTTCTTCTTCTTCGACG+CGG | + | chr3_4:783226-783245 | None:intergenic | 40.0% | |
| AATATCGATGTGAATCACCG+TGG | - | chr3_4:783325-783344 | Msa0483930:CDS | 40.0% | |
| ! | CAAGGTGTGTTTCTAACAAG+TGG | - | chr3_4:783412-783431 | Msa0483930:CDS | 40.0% |
| TCATGATCATGAGAAGGAGA+TGG | + | chr3_4:782797-782816 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr3_4:782828-782847 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr3_4:782849-782868 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr3_4:782850-782869 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr3_4:782957-782976 | Msa0483930:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr3_4:783060-783079 | Msa0483930:CDS | 40.0% | |
| ! | GTCAATATGGCTCTGTTCAA+AGG | + | chr3_4:783155-783174 | None:intergenic | 40.0% |
| TATCTTCTTCTTCTTCGACG+CGG | + | chr3_4:783226-783245 | None:intergenic | 40.0% | |
| AATATCGATGTGAATCACCG+TGG | - | chr3_4:783325-783344 | Msa0483930:CDS | 40.0% | |
| ! | CAAGGTGTGTTTCTAACAAG+TGG | - | chr3_4:783412-783431 | Msa0483930:CDS | 40.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr3_4:782840-782859 | Msa0483930:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr3_4:783132-783151 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr3_4:783145-783164 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr3_4:783148-783167 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGC+CGG | - | chr3_4:783200-783219 | Msa0483930:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr3_4:783283-783302 | Msa0483930:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr3_4:783291-783310 | Msa0483930:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr3_4:783292-783311 | Msa0483930:CDS | 45.0% | |
| ! | GTTTTTCCCTTTTAGCGCCA+CGG | + | chr3_4:783345-783364 | None:intergenic | 45.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr3_4:782840-782859 | Msa0483930:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr3_4:783132-783151 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr3_4:783145-783164 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr3_4:783148-783167 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGC+CGG | - | chr3_4:783200-783219 | Msa0483930:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr3_4:783283-783302 | Msa0483930:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr3_4:783291-783310 | Msa0483930:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr3_4:783292-783311 | Msa0483930:CDS | 45.0% | |
| ! | GTTTTTCCCTTTTAGCGCCA+CGG | + | chr3_4:783345-783364 | None:intergenic | 45.0% |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr3_4:782861-782880 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr3_4:783133-783152 | None:intergenic | 50.0% |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr3_4:783335-783354 | Msa0483930:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr3_4:783336-783355 | Msa0483930:CDS | 50.0% | |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr3_4:782861-782880 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr3_4:783133-783152 | None:intergenic | 50.0% |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr3_4:783335-783354 | Msa0483930:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr3_4:783336-783355 | Msa0483930:CDS | 50.0% | |
| TTCTTCTTCTTCGACGCGGC+CGG | + | chr3_4:783222-783241 | None:intergenic | 55.0% | |
| TTCTTCTTCTTCGACGCGGC+CGG | + | chr3_4:783222-783241 | None:intergenic | 55.0% | |
| TCGACGCGGCCGGCGTTTCT+TGG | + | chr3_4:783212-783231 | None:intergenic | 70.0% | |
| TCGACGCGGCCGGCGTTTCT+TGG | + | chr3_4:783212-783231 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 782767 | 783675 | 782767 | ID=Msa0483930;Name=Msa0483930 |
| chr3_4 | mRNA | 782767 | 783675 | 782767 | ID=Msa0483930-mRNA-1;Parent=Msa0483930;Name=Msa0483930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|302 |
| chr3_4 | exon | 782767 | 783675 | 782767 | ID=Msa0483930-mRNA-1:exon:234;Parent=Msa0483930-mRNA-1 |
| chr3_4 | CDS | 782767 | 783675 | 782767 | ID=Msa0483930-mRNA-1:cds;Parent=Msa0483930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
