Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484130 | XP_013448429.1 | 79.296 | 1478 | 129 | 17 | 1 | 1428 | 1 | 1351 | 0.0 | 2086 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484130 | sp|F4I8S3|CLSY3_ARATH | 48.048 | 743 | 335 | 18 | 707 | 1426 | 691 | 1405 | 0.0 | 647 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484130 | A0A072TZ61 | 79.296 | 1478 | 129 | 17 | 1 | 1428 | 1 | 1351 | 0.0 | 2086 |
Gene ID | Type | Classification |
---|---|---|
Msa0484130 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484130 | MtrunA17_Chr7g0233031 | 60.557 | 1293 | 353 | 24 | 174 | 1422 | 68 | 1247 | 0.0 | 1313 |
Msa0484130 | MtrunA17_Chr7g0225791 | 56.794 | 1435 | 416 | 35 | 48 | 1423 | 1 | 1290 | 0.0 | 1309 |
Msa0484130 | MtrunA17_Chr7g0232971 | 63.703 | 1091 | 271 | 20 | 358 | 1427 | 316 | 1302 | 0.0 | 1271 |
Msa0484130 | MtrunA17_Chr7g0232971 | 41.667 | 156 | 45 | 7 | 1 | 116 | 15 | 164 | 2.71e-16 | 85.1 |
Msa0484130 | MtrunA17_Chr7g0232991 | 95.865 | 653 | 27 | 0 | 776 | 1428 | 15 | 667 | 0.0 | 1260 |
Msa0484130 | MtrunA17_Chr7g0233021 | 70.307 | 879 | 228 | 11 | 558 | 1428 | 386 | 1239 | 0.0 | 1195 |
Msa0484130 | MtrunA17_Chr7g0233021 | 49.367 | 158 | 52 | 8 | 1 | 153 | 11 | 145 | 3.32e-20 | 97.8 |
Msa0484130 | MtrunA17_Chr4g0047081 | 56.615 | 1300 | 422 | 23 | 150 | 1423 | 57 | 1240 | 0.0 | 1178 |
Msa0484130 | MtrunA17_Chr4g0047081 | 51.299 | 154 | 44 | 8 | 1 | 153 | 1 | 124 | 4.81e-23 | 107 |
Msa0484130 | MtrunA17_Chr7g0233001 | 64.964 | 548 | 161 | 6 | 884 | 1423 | 1 | 525 | 0.0 | 687 |
Msa0484130 | MtrunA17_Chr1g0191141 | 34.100 | 739 | 396 | 17 | 711 | 1407 | 400 | 1089 | 7.05e-107 | 366 |
Msa0484130 | MtrunA17_Chr7g0224051 | 33.465 | 759 | 417 | 21 | 697 | 1409 | 389 | 1105 | 8.06e-106 | 364 |
Msa0484130 | MtrunA17_Chr2g0320781 | 70.248 | 242 | 70 | 2 | 1131 | 1370 | 1 | 242 | 1.13e-104 | 332 |
Msa0484130 | MtrunA17_Chr3g0114161 | 34.034 | 761 | 403 | 25 | 704 | 1409 | 520 | 1236 | 4.35e-102 | 355 |
Msa0484130 | MtrunA17_Chr5g0437621 | 32.443 | 749 | 423 | 20 | 704 | 1409 | 584 | 1292 | 5.04e-100 | 350 |
Msa0484130 | MtrunA17_Chr8g0352361 | 28.835 | 704 | 388 | 21 | 702 | 1375 | 232 | 852 | 3.01e-69 | 251 |
Msa0484130 | MtrunA17_Chr2g0296421 | 28.674 | 694 | 394 | 18 | 704 | 1375 | 387 | 1001 | 1.47e-68 | 252 |
Msa0484130 | MtrunA17_Chr1g0183681 | 24.352 | 579 | 348 | 16 | 826 | 1386 | 383 | 889 | 2.09e-26 | 118 |
Msa0484130 | MtrunA17_Chr4g0052341 | 23.363 | 565 | 314 | 18 | 835 | 1378 | 746 | 1212 | 2.52e-24 | 111 |
Msa0484130 | MtrunA17_Chr8g0384531 | 28.382 | 377 | 227 | 12 | 1033 | 1374 | 519 | 887 | 5.90e-24 | 110 |
Msa0484130 | MtrunA17_Chr1g0163011 | 24.740 | 578 | 305 | 22 | 836 | 1357 | 197 | 700 | 1.02e-23 | 108 |
Msa0484130 | MtrunA17_Chr1g0205891 | 27.143 | 350 | 197 | 13 | 1033 | 1357 | 501 | 817 | 5.62e-22 | 103 |
Msa0484130 | MtrunA17_Chr3g0137091 | 27.933 | 358 | 225 | 9 | 1033 | 1382 | 435 | 767 | 8.17e-22 | 103 |
Msa0484130 | MtrunA17_Chr5g0403921 | 26.196 | 397 | 238 | 11 | 1033 | 1400 | 312 | 682 | 1.83e-21 | 101 |
Msa0484130 | MtrunA17_Chr5g0394201 | 26.239 | 343 | 208 | 11 | 1033 | 1357 | 488 | 803 | 4.48e-21 | 100 |
Msa0484130 | MtrunA17_Chr1g0190381 | 38.150 | 173 | 98 | 3 | 1223 | 1386 | 189 | 361 | 6.74e-21 | 98.6 |
Msa0484130 | MtrunA17_Chr4g0066651 | 26.254 | 339 | 221 | 6 | 1033 | 1357 | 1116 | 1439 | 3.27e-20 | 98.2 |
Msa0484130 | MtrunA17_Chr4g0066741 | 25.641 | 351 | 192 | 8 | 1033 | 1357 | 313 | 620 | 5.49e-20 | 97.1 |
Msa0484130 | MtrunA17_Chr5g0442141 | 26.100 | 341 | 211 | 10 | 1033 | 1357 | 749 | 1064 | 7.31e-20 | 97.1 |
Msa0484130 | MtrunA17_Chr7g0232121 | 26.329 | 395 | 224 | 12 | 1034 | 1390 | 175 | 540 | 1.34e-19 | 95.5 |
Msa0484130 | MtrunA17_Chr5g0393461 | 24.211 | 380 | 237 | 11 | 1032 | 1374 | 322 | 687 | 2.50e-19 | 94.7 |
Msa0484130 | MtrunA17_Chr7g0224021 | 44.660 | 103 | 53 | 3 | 815 | 917 | 13 | 111 | 1.26e-18 | 83.2 |
Msa0484130 | MtrunA17_Chr4g0017211 | 25.118 | 422 | 257 | 10 | 1034 | 1408 | 1581 | 1990 | 8.78e-18 | 90.1 |
Msa0484130 | MtrunA17_Chr3g0095091 | 25.806 | 341 | 212 | 11 | 1033 | 1357 | 703 | 1018 | 2.87e-17 | 88.6 |
Msa0484130 | MtrunA17_Chr1g0175191 | 33.333 | 153 | 97 | 2 | 1223 | 1375 | 1063 | 1210 | 1.74e-16 | 85.9 |
Msa0484130 | MtrunA17_Chr7g0224031 | 29.167 | 216 | 116 | 7 | 1005 | 1193 | 30 | 235 | 1.74e-15 | 77.8 |
Msa0484130 | MtrunA17_Chr4g0040301 | 41.121 | 107 | 62 | 1 | 1272 | 1378 | 426 | 531 | 4.43e-15 | 80.9 |
Msa0484130 | MtrunA17_Chr1g0168031 | 32.258 | 155 | 100 | 2 | 1238 | 1392 | 1003 | 1152 | 3.35e-14 | 78.2 |
Msa0484130 | MtrunA17_Chr7g0248031 | 24.561 | 342 | 219 | 9 | 1033 | 1350 | 1119 | 1445 | 6.09e-14 | 77.8 |
Msa0484130 | MtrunA17_Chr2g0281601 | 30.719 | 153 | 97 | 3 | 1236 | 1386 | 1146 | 1291 | 6.90e-14 | 77.4 |
Msa0484130 | MtrunA17_Chr7g0255821 | 37.815 | 119 | 69 | 2 | 1240 | 1357 | 668 | 782 | 1.05e-13 | 76.3 |
Msa0484130 | MtrunA17_Chr7g0231521 | 29.609 | 179 | 111 | 2 | 1223 | 1390 | 287 | 461 | 1.89e-13 | 75.5 |
Msa0484130 | MtrunA17_Chr7g0257101 | 25.000 | 224 | 137 | 5 | 1160 | 1383 | 1156 | 1348 | 3.44e-13 | 75.1 |
Msa0484130 | MtrunA17_Chr2g0320751 | 30.345 | 145 | 92 | 3 | 1240 | 1382 | 868 | 1005 | 6.17e-13 | 73.9 |
Msa0484130 | MtrunA17_Chr1g0212331 | 30.496 | 141 | 93 | 2 | 1240 | 1380 | 887 | 1022 | 6.28e-13 | 73.9 |
Msa0484130 | MtrunA17_Chr8g0348721 | 26.023 | 342 | 214 | 10 | 1033 | 1350 | 1111 | 1437 | 1.32e-12 | 73.2 |
Msa0484130 | MtrunA17_Chr2g0286291 | 35.593 | 118 | 72 | 1 | 1240 | 1357 | 510 | 623 | 6.15e-12 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484130 | AT1G05490.1 | 48.048 | 743 | 335 | 18 | 707 | 1426 | 691 | 1405 | 0.0 | 647 |
Msa0484130 | AT3G24340.1 | 45.087 | 743 | 334 | 14 | 699 | 1426 | 448 | 1131 | 0.0 | 587 |
Msa0484130 | AT3G42670.2 | 33.244 | 749 | 411 | 22 | 704 | 1409 | 541 | 1243 | 2.39e-103 | 359 |
Msa0484130 | AT3G42670.3 | 33.244 | 749 | 411 | 22 | 704 | 1409 | 541 | 1243 | 2.39e-103 | 359 |
Msa0484130 | AT3G42670.1 | 33.244 | 749 | 411 | 22 | 704 | 1409 | 541 | 1243 | 2.39e-103 | 359 |
Msa0484130 | AT3G42670.4 | 33.156 | 751 | 411 | 24 | 704 | 1409 | 541 | 1245 | 1.25e-102 | 357 |
Msa0484130 | AT5G20420.1 | 31.806 | 742 | 431 | 18 | 704 | 1409 | 547 | 1249 | 2.23e-96 | 339 |
Msa0484130 | AT2G16390.2 | 30.076 | 655 | 358 | 20 | 744 | 1375 | 273 | 850 | 2.44e-73 | 264 |
Msa0484130 | AT2G16390.1 | 30.076 | 655 | 358 | 20 | 744 | 1375 | 270 | 847 | 4.11e-73 | 263 |
Msa0484130 | AT2G21450.3 | 29.279 | 666 | 360 | 20 | 744 | 1375 | 94 | 682 | 4.00e-71 | 254 |
Msa0484130 | AT2G21450.2 | 29.129 | 666 | 361 | 20 | 744 | 1375 | 192 | 780 | 4.59e-71 | 256 |
Msa0484130 | AT2G21450.1 | 29.129 | 666 | 361 | 20 | 744 | 1375 | 185 | 773 | 5.94e-71 | 256 |
Msa0484130 | AT5G44800.1 | 25.142 | 529 | 295 | 19 | 869 | 1378 | 710 | 1156 | 1.99e-24 | 112 |
Msa0484130 | AT5G63950.2 | 26.738 | 374 | 228 | 9 | 1033 | 1370 | 495 | 858 | 7.43e-24 | 110 |
Msa0484130 | AT5G63950.1 | 26.738 | 374 | 228 | 9 | 1033 | 1370 | 512 | 875 | 8.19e-24 | 110 |
Msa0484130 | AT2G18760.4 | 27.429 | 350 | 239 | 5 | 1031 | 1377 | 540 | 877 | 5.32e-23 | 107 |
Msa0484130 | AT2G18760.1 | 27.429 | 350 | 239 | 5 | 1031 | 1377 | 540 | 877 | 5.32e-23 | 107 |
Msa0484130 | AT2G18760.2 | 27.429 | 350 | 239 | 5 | 1031 | 1377 | 540 | 877 | 5.32e-23 | 107 |
Msa0484130 | AT2G18760.7 | 27.429 | 350 | 239 | 5 | 1031 | 1377 | 540 | 877 | 5.32e-23 | 107 |
Msa0484130 | AT2G18760.5 | 27.429 | 350 | 239 | 5 | 1031 | 1377 | 540 | 877 | 5.32e-23 | 107 |
Msa0484130 | AT2G18760.6 | 27.429 | 350 | 239 | 5 | 1031 | 1377 | 540 | 877 | 5.32e-23 | 107 |
Msa0484130 | AT2G18760.3 | 27.429 | 350 | 239 | 5 | 1031 | 1377 | 599 | 936 | 6.66e-23 | 107 |
Msa0484130 | AT4G31900.3 | 25.620 | 363 | 226 | 8 | 1033 | 1384 | 353 | 682 | 1.53e-22 | 105 |
Msa0484130 | AT4G31900.2 | 25.620 | 363 | 226 | 8 | 1033 | 1384 | 312 | 641 | 1.55e-22 | 105 |
Msa0484130 | AT4G31900.1 | 25.620 | 363 | 226 | 8 | 1033 | 1384 | 353 | 682 | 1.71e-22 | 105 |
Msa0484130 | AT2G44980.1 | 27.913 | 369 | 211 | 11 | 1034 | 1377 | 181 | 519 | 1.79e-22 | 105 |
Msa0484130 | AT2G13370.1 | 28.235 | 340 | 203 | 12 | 1033 | 1357 | 757 | 1070 | 1.11e-21 | 103 |
Msa0484130 | AT2G13370.2 | 28.235 | 340 | 203 | 12 | 1033 | 1357 | 757 | 1070 | 1.11e-21 | 103 |
Msa0484130 | AT2G13370.3 | 28.235 | 340 | 203 | 12 | 1033 | 1357 | 757 | 1070 | 1.11e-21 | 103 |
Msa0484130 | AT3G06010.1 | 26.361 | 349 | 205 | 12 | 1033 | 1359 | 528 | 846 | 1.08e-20 | 99.8 |
Msa0484130 | AT2G25170.1 | 26.506 | 332 | 213 | 8 | 1033 | 1357 | 419 | 726 | 1.51e-20 | 99.8 |
Msa0484130 | AT2G25170.4 | 26.506 | 332 | 213 | 8 | 1033 | 1357 | 419 | 726 | 1.51e-20 | 99.8 |
Msa0484130 | AT2G25170.2 | 26.506 | 332 | 213 | 8 | 1033 | 1357 | 436 | 743 | 1.79e-20 | 99.4 |
Msa0484130 | AT2G25170.3 | 26.506 | 332 | 213 | 8 | 1033 | 1357 | 445 | 752 | 2.43e-20 | 99.0 |
Msa0484130 | AT2G44980.3 | 26.735 | 389 | 217 | 12 | 1034 | 1384 | 186 | 544 | 3.16e-20 | 98.2 |
Msa0484130 | AT5G18620.1 | 26.471 | 340 | 203 | 8 | 1033 | 1357 | 319 | 626 | 3.37e-20 | 98.2 |
Msa0484130 | AT5G18620.2 | 26.471 | 340 | 203 | 8 | 1033 | 1357 | 319 | 626 | 3.46e-20 | 98.2 |
Msa0484130 | AT2G44980.2 | 26.963 | 382 | 211 | 12 | 1034 | 1377 | 187 | 538 | 4.16e-20 | 97.8 |
Msa0484130 | AT2G02090.1 | 23.351 | 561 | 283 | 21 | 868 | 1357 | 234 | 718 | 4.87e-20 | 97.4 |
Msa0484130 | AT3G06400.3 | 26.426 | 333 | 212 | 7 | 1033 | 1357 | 314 | 621 | 1.03e-19 | 96.7 |
Msa0484130 | AT3G06400.2 | 26.426 | 333 | 212 | 7 | 1033 | 1357 | 314 | 621 | 1.10e-19 | 96.7 |
Msa0484130 | AT3G06400.1 | 26.426 | 333 | 212 | 7 | 1033 | 1357 | 314 | 621 | 1.14e-19 | 96.7 |
Msa0484130 | AT1G08600.1 | 36.416 | 173 | 101 | 3 | 1223 | 1386 | 1095 | 1267 | 1.96e-19 | 95.9 |
Msa0484130 | AT1G08600.4 | 36.416 | 173 | 101 | 3 | 1223 | 1386 | 1116 | 1288 | 2.04e-19 | 95.9 |
Msa0484130 | AT1G08600.3 | 36.416 | 173 | 101 | 3 | 1223 | 1386 | 1116 | 1288 | 2.04e-19 | 95.9 |
Msa0484130 | AT1G08600.2 | 36.416 | 173 | 101 | 3 | 1223 | 1386 | 1116 | 1288 | 2.04e-19 | 95.9 |
Msa0484130 | AT2G28290.2 | 26.254 | 339 | 221 | 6 | 1033 | 1357 | 881 | 1204 | 2.08e-19 | 96.3 |
Msa0484130 | AT2G28290.3 | 26.254 | 339 | 221 | 6 | 1033 | 1357 | 881 | 1204 | 2.15e-19 | 96.3 |
Msa0484130 | AT2G28290.4 | 26.254 | 339 | 221 | 6 | 1033 | 1357 | 881 | 1204 | 2.15e-19 | 96.3 |
Msa0484130 | AT2G28290.6 | 26.254 | 339 | 221 | 6 | 1033 | 1357 | 882 | 1205 | 2.17e-19 | 96.3 |
Msa0484130 | AT2G28290.1 | 26.254 | 339 | 221 | 6 | 1033 | 1357 | 881 | 1204 | 2.19e-19 | 96.3 |
Msa0484130 | AT2G28290.5 | 26.254 | 339 | 221 | 6 | 1033 | 1357 | 882 | 1205 | 2.21e-19 | 95.9 |
Msa0484130 | AT3G19210.1 | 24.552 | 391 | 249 | 10 | 1028 | 1385 | 314 | 691 | 2.36e-19 | 95.1 |
Msa0484130 | AT3G19210.3 | 24.552 | 391 | 249 | 10 | 1028 | 1385 | 314 | 691 | 2.76e-19 | 94.7 |
Msa0484130 | AT3G19210.2 | 23.834 | 386 | 256 | 9 | 1028 | 1385 | 314 | 689 | 2.87e-19 | 95.1 |
Msa0484130 | AT5G19310.2 | 25.507 | 345 | 209 | 11 | 1033 | 1357 | 246 | 562 | 5.64e-19 | 94.0 |
Msa0484130 | AT5G19310.1 | 25.507 | 345 | 209 | 11 | 1033 | 1357 | 510 | 826 | 8.75e-19 | 93.6 |
Msa0484130 | AT5G66750.1 | 32.727 | 165 | 107 | 1 | 1236 | 1400 | 538 | 698 | 5.20e-16 | 84.3 |
Msa0484130 | AT3G57300.1 | 26.160 | 237 | 133 | 6 | 1158 | 1383 | 1157 | 1362 | 1.11e-15 | 83.6 |
Msa0484130 | AT3G57300.4 | 26.160 | 237 | 133 | 6 | 1158 | 1383 | 1157 | 1362 | 1.11e-15 | 83.6 |
Msa0484130 | AT3G57300.2 | 26.160 | 237 | 133 | 6 | 1158 | 1383 | 1190 | 1395 | 1.27e-15 | 83.6 |
Msa0484130 | AT3G12810.1 | 32.903 | 155 | 99 | 2 | 1223 | 1377 | 1076 | 1225 | 1.32e-15 | 83.6 |
Msa0484130 | AT3G12810.2 | 32.903 | 155 | 99 | 2 | 1223 | 1377 | 1072 | 1221 | 1.39e-15 | 83.6 |
Msa0484130 | AT1G03750.1 | 36.429 | 140 | 84 | 3 | 1239 | 1378 | 545 | 679 | 5.19e-15 | 81.3 |
Msa0484130 | AT5G43530.1 | 36.806 | 144 | 86 | 2 | 1239 | 1382 | 1128 | 1266 | 5.65e-15 | 81.3 |
Msa0484130 | AT5G05130.1 | 32.927 | 164 | 100 | 4 | 1238 | 1400 | 725 | 879 | 4.80e-14 | 77.8 |
Msa0484130 | AT1G50410.2 | 32.624 | 141 | 88 | 3 | 1240 | 1379 | 828 | 962 | 2.49e-13 | 75.9 |
Msa0484130 | AT1G50410.1 | 32.624 | 141 | 88 | 3 | 1240 | 1379 | 828 | 962 | 2.49e-13 | 75.9 |
Msa0484130 | AT1G50410.3 | 32.624 | 141 | 88 | 3 | 1240 | 1379 | 828 | 962 | 2.49e-13 | 75.9 |
Msa0484130 | AT3G20010.1 | 32.143 | 140 | 90 | 2 | 1240 | 1379 | 894 | 1028 | 3.69e-13 | 75.1 |
Msa0484130 | AT3G20010.5 | 32.143 | 140 | 90 | 2 | 1240 | 1379 | 894 | 1028 | 3.69e-13 | 75.1 |
Msa0484130 | AT3G20010.7 | 32.143 | 140 | 90 | 2 | 1240 | 1379 | 894 | 1028 | 3.69e-13 | 75.1 |
Msa0484130 | AT3G20010.2 | 32.143 | 140 | 90 | 2 | 1240 | 1379 | 603 | 737 | 4.26e-13 | 74.7 |
Msa0484130 | AT3G20010.3 | 32.143 | 140 | 90 | 2 | 1240 | 1379 | 628 | 762 | 4.99e-13 | 74.7 |
Msa0484130 | AT1G61140.1 | 34.711 | 121 | 70 | 3 | 1239 | 1357 | 1124 | 1237 | 5.78e-13 | 74.7 |
Msa0484130 | AT1G61140.3 | 34.711 | 121 | 70 | 3 | 1239 | 1357 | 966 | 1079 | 8.94e-13 | 73.9 |
Msa0484130 | AT2G46020.5 | 24.157 | 356 | 225 | 9 | 1033 | 1360 | 1105 | 1443 | 3.17e-12 | 72.4 |
Msa0484130 | AT2G46020.1 | 24.157 | 356 | 225 | 9 | 1033 | 1360 | 1105 | 1443 | 3.17e-12 | 72.4 |
Msa0484130 | AT2G46020.6 | 24.157 | 356 | 225 | 9 | 1033 | 1360 | 1105 | 1443 | 3.17e-12 | 72.4 |
Msa0484130 | AT2G46020.2 | 24.157 | 356 | 225 | 9 | 1033 | 1360 | 1106 | 1444 | 3.28e-12 | 72.4 |
Msa0484130 | AT2G46020.3 | 24.157 | 356 | 225 | 9 | 1033 | 1360 | 1106 | 1444 | 3.28e-12 | 72.4 |
Msa0484130 | AT2G46020.4 | 24.157 | 356 | 225 | 9 | 1033 | 1360 | 1106 | 1444 | 3.28e-12 | 72.4 |
Msa0484130 | AT5G22750.1 | 29.371 | 143 | 96 | 2 | 1240 | 1382 | 881 | 1018 | 8.44e-12 | 70.9 |
Msa0484130 | AT1G11100.4 | 29.371 | 143 | 96 | 2 | 1235 | 1377 | 1112 | 1249 | 1.47e-11 | 70.1 |
Msa0484130 | AT1G11100.2 | 29.371 | 143 | 96 | 2 | 1235 | 1377 | 1111 | 1248 | 1.52e-11 | 70.1 |
Msa0484130 | AT1G11100.3 | 29.371 | 143 | 96 | 2 | 1235 | 1377 | 969 | 1106 | 1.68e-11 | 69.7 |
Msa0484130 | AT1G11100.1 | 29.371 | 143 | 96 | 2 | 1235 | 1377 | 1068 | 1205 | 1.94e-11 | 69.7 |
Msa0484130 | AT1G11100.5 | 29.371 | 143 | 96 | 2 | 1235 | 1377 | 925 | 1062 | 2.28e-11 | 69.3 |
Find 263 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTAAGCTCTTCTCTTAAT+TGG | 0.126435 | 3_4:+1330836 | Msa0484130:CDS |
TCATCTGAATGTATTGAAAT+AGG | 0.170038 | 3_4:-1326518 | None:intergenic |
TATTGTCAACCTTGTCTTTC+CGG | 0.184839 | 3_4:-1329696 | None:intergenic |
TCCAGCTGGGAACTGGATTC+TGG | 0.191325 | 3_4:+1330394 | Msa0484130:CDS |
ATGCCGTTAATTTGCATAAT+TGG | 0.193788 | 3_4:+1329882 | Msa0484130:CDS |
AACAAACGGATTATACTTTC+TGG | 0.202068 | 3_4:+1330238 | Msa0484130:CDS |
AGATAAAAGCTTTATTGATT+TGG | 0.212818 | 3_4:+1326961 | Msa0484130:CDS |
TCATCAGAATGTATTGAAAT+AGG | 0.213814 | 3_4:-1326698 | None:intergenic |
GATAAAAGCTTTATTGATTT+GGG | 0.225804 | 3_4:+1326962 | Msa0484130:CDS |
TTTGGATTTGTCTTTGGATT+TGG | 0.226581 | 3_4:-1327560 | None:intergenic |
TTTGCCTTTGGATTTGAATT+TGG | 0.231200 | 3_4:-1327881 | None:intergenic |
GGAAAATATCAATTTGTTAC+AGG | 0.239258 | 3_4:+1327607 | Msa0484130:CDS |
AGAATCACCAACAATTTCTT+TGG | 0.246085 | 3_4:-1327578 | None:intergenic |
AATTTCTTTGGATTTGTCTT+TGG | 0.253938 | 3_4:-1327566 | None:intergenic |
AACCTTGTCTTTCCGGTTCC+AGG | 0.255300 | 3_4:-1329689 | None:intergenic |
GCAACATTCACACAGTTATT+AGG | 0.262566 | 3_4:-1327916 | None:intergenic |
ACTTTCCTTTCTACACTCTT+TGG | 0.267615 | 3_4:-1327484 | None:intergenic |
TTTCTTCGCCGCTTCGATTT+CGG | 0.272003 | 3_4:-1326188 | None:intergenic |
GTATAATCCGTTTGTTTGTT+TGG | 0.282146 | 3_4:-1330231 | None:intergenic |
AACTCCTTGCTCAATGCTAT+TGG | 0.289352 | 3_4:+1328190 | Msa0484130:CDS |
CTGCGAGTTTGTTACTTACT+TGG | 0.289688 | 3_4:+1329777 | Msa0484130:CDS |
TTTGGCATTGTCTTTGCCTT+TGG | 0.292836 | 3_4:-1327893 | None:intergenic |
AAGAAGGCTTTGAGTTCATT+TGG | 0.296646 | 3_4:+1329582 | Msa0484130:CDS |
AGCTTAATTGGTCTTTAATT+AGG | 0.299434 | 3_4:-1330822 | None:intergenic |
ACAATAACCGGCAAGCATTT+AGG | 0.299529 | 3_4:-1329749 | None:intergenic |
AATTAAGAGAAGAGCTTAAT+TGG | 0.300187 | 3_4:-1330834 | None:intergenic |
CACAATTGAATCTTTGTTCA+TGG | 0.305082 | 3_4:-1328226 | None:intergenic |
TCCATTGACGATGATGATTA+TGG | 0.305278 | 3_4:+1326356 | Msa0484130:CDS |
AGGAAGAGAATGAAGTGTTA+TGG | 0.305313 | 3_4:+1328373 | Msa0484130:CDS |
TCAATACATTCTGATGAGTA+TGG | 0.306243 | 3_4:+1326704 | Msa0484130:CDS |
CAAGCAGTTGAAGTTGCTTA+TGG | 0.307193 | 3_4:+1330438 | Msa0484130:CDS |
CTTTCACATCATCAGGAATT+AGG | 0.309588 | 3_4:-1329538 | None:intergenic |
CTCTCTTTCTATAACCTTCA+TGG | 0.314230 | 3_4:-1329406 | None:intergenic |
CTCATAATGAACGCACTGTT+TGG | 0.316520 | 3_4:+1329513 | Msa0484130:CDS |
GAAAAGTATCTCAAAGGTTT+AGG | 0.339737 | 3_4:+1327958 | Msa0484130:CDS |
TTTGCTCGAATGCAAACTTT+TGG | 0.342682 | 3_4:+1330642 | Msa0484130:CDS |
CATCTGAATGTATTGAAATA+GGG | 0.346975 | 3_4:-1326517 | None:intergenic |
GAAATTACCTTGGCACCTTC+AGG | 0.347612 | 3_4:-1326335 | None:intergenic |
GGAAGAGAATGAAGTGTTAT+GGG | 0.349114 | 3_4:+1328374 | Msa0484130:CDS |
TCAATACATTCAGATGAGTA+TGG | 0.349742 | 3_4:+1326524 | Msa0484130:CDS |
GTAAATGCCTCGCTCTTTGA+TGG | 0.352134 | 3_4:+1329446 | Msa0484130:CDS |
ATCCTTCAAAAGAAACTTCC+CGG | 0.357710 | 3_4:+1330490 | Msa0484130:CDS |
GGCATCACCATGCTCTTTAC+CGG | 0.372710 | 3_4:-1329864 | None:intergenic |
TGAAGTGTTATGGGATGAAT+TGG | 0.376076 | 3_4:+1328383 | Msa0484130:CDS |
ATTCACACAGTTATTAGGTT+TGG | 0.384366 | 3_4:-1327911 | None:intergenic |
ACACACCTCATGAACGGATA+TGG | 0.384575 | 3_4:+1328310 | Msa0484130:CDS |
CATCAGAATGTATTGAAATA+GGG | 0.384985 | 3_4:-1326697 | None:intergenic |
AGACCAATTATGCAAATTAA+CGG | 0.388691 | 3_4:-1329885 | None:intergenic |
GAGGTTTCTTTCACATCATC+AGG | 0.389906 | 3_4:-1329545 | None:intergenic |
ATCTCCCATGCTCCTGGAAC+CGG | 0.393951 | 3_4:+1329677 | Msa0484130:CDS |
CTCCTTCTCGTTCACATAAG+AGG | 0.396609 | 3_4:-1327134 | None:intergenic |
GTACAAAGAAAGTAGCATTC+TGG | 0.397195 | 3_4:+1329958 | Msa0484130:CDS |
AAATATGAGGAGGTAGAGAA+TGG | 0.402901 | 3_4:+1327364 | Msa0484130:CDS |
CTCGCAGGAGCAACAATAAC+CGG | 0.407574 | 3_4:-1329761 | None:intergenic |
TGCATTATCTCCCATGCTCC+TGG | 0.408677 | 3_4:+1329671 | Msa0484130:CDS |
ACTCCTTGCTCAATGCTATT+GGG | 0.410682 | 3_4:+1328191 | Msa0484130:CDS |
TCGACAAAATCTCGCTCCTT+CGG | 0.414619 | 3_4:-1331315 | None:intergenic |
CCAGCTGGGAACTGGATTCT+GGG | 0.416349 | 3_4:+1330395 | Msa0484130:CDS |
GAGAAATGGTTATATGAGAA+AGG | 0.417233 | 3_4:+1330117 | Msa0484130:CDS |
TTGAACAATCTTGAGTTATC+CGG | 0.417868 | 3_4:+1329845 | Msa0484130:CDS |
TCTGATGGAAGTGAGGATTC+TGG | 0.419247 | 3_4:+1327013 | Msa0484130:CDS |
AGATTGTTCAAATTGTGAAA+TGG | 0.429221 | 3_4:-1329833 | None:intergenic |
TCCATGAAATTGTTCTGAAA+AGG | 0.432806 | 3_4:-1330265 | None:intergenic |
TCTCTTTCTATAACCTTCAT+GGG | 0.433057 | 3_4:-1329405 | None:intergenic |
TACAAAGAAAGTAGCATTCT+GGG | 0.434956 | 3_4:+1329959 | Msa0484130:CDS |
TCGAGTGAACACAACTCCTT+TGG | 0.438217 | 3_4:-1328168 | None:intergenic |
AACAAAGAAAGGGATTATAA+AGG | 0.438543 | 3_4:+1328054 | Msa0484130:CDS |
AGTGTCTCTGATACTCCATT+CGG | 0.443577 | 3_4:-1327457 | None:intergenic |
GAGAAGCTAGCTGGAGGAGG+GGG | 0.444338 | 3_4:+1330001 | Msa0484130:CDS |
AAAGTCCACAGCACAACTCT+TGG | 0.448688 | 3_4:-1331220 | None:intergenic |
TCTTCTTTGGAATATGTTGT+TGG | 0.449183 | 3_4:+1330204 | Msa0484130:CDS |
AGTGTTTCCTAAATGCTTGC+CGG | 0.449378 | 3_4:+1329742 | Msa0484130:CDS |
TCCACCGCAGTATAGTATTT+CGG | 0.449871 | 3_4:-1327193 | None:intergenic |
ACGGATATGGAGCCTCAAAA+AGG | 0.451084 | 3_4:+1328323 | Msa0484130:CDS |
TCATAATGAACGCACTGTTT+GGG | 0.452252 | 3_4:+1329514 | Msa0484130:CDS |
TGAGGTGTGTCCACAGAAAC+TGG | 0.457489 | 3_4:-1328297 | None:intergenic |
TCTTTCCGGTTCCAGGAGCA+TGG | 0.457877 | 3_4:-1329682 | None:intergenic |
AGTTTGCATCGTTGAAGCTA+TGG | 0.458302 | 3_4:-1330921 | None:intergenic |
ACCATAATCATCATCGTCAA+TGG | 0.464821 | 3_4:-1326357 | None:intergenic |
CATGTACAGAATTTCCTTGT+CGG | 0.465749 | 3_4:-1330860 | None:intergenic |
CCCAGAATCCAGTTCCCAGC+TGG | 0.466993 | 3_4:-1330395 | None:intergenic |
GACAAATCCAAAGAAATTGT+TGG | 0.467058 | 3_4:+1327571 | Msa0484130:CDS |
GTCTAATGCACGACCTAGTA+AGG | 0.467104 | 3_4:+1329904 | Msa0484130:CDS |
GAACAAAGATTCAATTGTGT+TGG | 0.467250 | 3_4:+1328230 | Msa0484130:CDS |
GCACCTTCAGGAACCACAAA+AGG | 0.467360 | 3_4:-1326323 | None:intergenic |
TTTGTTACAGGCTTAGATGT+TGG | 0.468784 | 3_4:+1327619 | Msa0484130:CDS |
CTATACTGCGGTGGAGGAGC+TGG | 0.470372 | 3_4:+1327201 | Msa0484130:CDS |
TTATGATAATGATGAAGAAA+TGG | 0.473907 | 3_4:+1327300 | Msa0484130:CDS |
GCACCTAAAATATTTCAAAC+AGG | 0.476189 | 3_4:+1331137 | Msa0484130:CDS |
CAAAGATTCAATTGTGTTGG+AGG | 0.476395 | 3_4:+1328233 | Msa0484130:CDS |
AAGCTTCGATTGAATCCAAA+TGG | 0.480319 | 3_4:+1330703 | Msa0484130:CDS |
AAATGACGGAGAACAAAGAA+AGG | 0.481748 | 3_4:+1328043 | Msa0484130:CDS |
TGGTCTTTAATTAGGCGTAA+AGG | 0.483431 | 3_4:-1330814 | None:intergenic |
TATCTCAAAGGTTTAGGTGT+TGG | 0.485445 | 3_4:+1327964 | Msa0484130:CDS |
AGTGATGAAGAACACTCTAA+TGG | 0.485554 | 3_4:+1326551 | Msa0484130:CDS |
AAGAGTGATGATTCAGATGA+AGG | 0.486378 | 3_4:+1326911 | Msa0484130:CDS |
TGCGAGTTTGTTACTTACTT+GGG | 0.488436 | 3_4:+1329778 | Msa0484130:CDS |
AGAAATGGTGAGAGAGGTGA+AGG | 0.488715 | 3_4:+1327315 | Msa0484130:CDS |
GTTTGCTTCTGAAAACTGTC+CGG | 0.488894 | 3_4:-1330541 | None:intergenic |
CTCAAAGGTTTAGGTGTTGG+AGG | 0.489532 | 3_4:+1327967 | Msa0484130:CDS |
GCCACCCTCCCTGCGAGGAT+CGG | 0.489802 | 3_4:-1329648 | None:intergenic |
ATTGATAGATTTCCCCATGA+AGG | 0.492423 | 3_4:+1329392 | Msa0484130:CDS |
ATATTTCAAACAGGCCGAAA+AGG | 0.494819 | 3_4:+1331146 | Msa0484130:CDS |
TTGTGCTGCTCGATGTTGTA+TGG | 0.502534 | 3_4:+1331016 | Msa0484130:CDS |
GAACGAGAAGGAGGAGGAAG+CGG | 0.503085 | 3_4:+1327144 | Msa0484130:CDS |
GCAAGTGCAGAGAAGAGAAA+TGG | 0.503421 | 3_4:+1330103 | Msa0484130:CDS |
TGTTTGTAAATTGTAATGGC+TGG | 0.503987 | 3_4:+1326113 | None:intergenic |
AAAAGACGAGTTCAGATAAC+CGG | 0.504954 | 3_4:-1331170 | None:intergenic |
AATGTTGCTGACTGTGATAT+AGG | 0.505417 | 3_4:+1327931 | Msa0484130:CDS |
AACCAGAATGAAACATCAAA+GGG | 0.505693 | 3_4:+1327832 | Msa0484130:intron |
AGTTTGTACGAGAAGCTAGC+TGG | 0.507351 | 3_4:+1329992 | Msa0484130:CDS |
AGGCTATCAGCAGAGCATAT+AGG | 0.507464 | 3_4:+1331058 | Msa0484130:CDS |
GTTACAGGCTTAGATGTTGG+AGG | 0.512711 | 3_4:+1327622 | Msa0484130:CDS |
AACTCCTTTGGCATAAAATG+TGG | 0.512726 | 3_4:-1328156 | None:intergenic |
CTTTCCGGTTCCAGGAGCAT+GGG | 0.513984 | 3_4:-1329681 | None:intergenic |
GGAAGTAGAGAAGAAGAAAA+CGG | 0.514454 | 3_4:+1327165 | Msa0484130:CDS |
CCATCAATGAAAATAACAAA+AGG | 0.514482 | 3_4:-1326224 | None:intergenic |
TACGAGAAGCTAGCTGGAGG+AGG | 0.514571 | 3_4:+1329998 | Msa0484130:CDS |
TTCATTGATGGAGATGATGA+TGG | 0.517445 | 3_4:+1326236 | Msa0484130:CDS |
CAGCATACAATTTCTTAACC+CGG | 0.518018 | 3_4:-1330509 | None:intergenic |
AATATGAGGAGGTAGAGAAT+GGG | 0.518759 | 3_4:+1327365 | Msa0484130:CDS |
GAATCCTTCTGTCGAAAGGC+AGG | 0.518935 | 3_4:+1331038 | Msa0484130:CDS |
TGAGTAAAACCGATCCTCGC+AGG | 0.519904 | 3_4:+1329639 | Msa0484130:CDS |
TCCGAGGGAATTAGCTTAGT+CGG | 0.520869 | 3_4:+1330982 | Msa0484130:CDS |
TGGAGATCCAAACAAACAAA+CGG | 0.521879 | 3_4:+1330224 | Msa0484130:CDS |
CTCCTGTACCATTGAGAAGA+GGG | 0.522445 | 3_4:+1327417 | Msa0484130:CDS |
TCAAACAGGCCGAAAAGGAC+CGG | 0.524374 | 3_4:+1331151 | Msa0484130:CDS |
AGTGATGATTCAGATGAAGG+TGG | 0.524956 | 3_4:+1326914 | Msa0484130:CDS |
GGAGCTGGTGAGAGAGGTGA+TGG | 0.524995 | 3_4:+1327216 | Msa0484130:CDS |
CGACAAGGAAATTCTGTACA+TGG | 0.528490 | 3_4:+1330861 | Msa0484130:CDS |
GAAGTAGAGAAGAAGAAAAC+GGG | 0.532201 | 3_4:+1327166 | Msa0484130:CDS |
TGATAATGCTGATGATGAAA+AGG | 0.532332 | 3_4:+1326601 | Msa0484130:CDS |
ATCAGCAGAGCATATAGGAT+TGG | 0.532611 | 3_4:+1331063 | Msa0484130:CDS |
ATGAAGATGAAGATGAAGAA+GGG | 0.534134 | 3_4:+1326381 | Msa0484130:CDS |
ACCCCTCTTCTCAATGGTAC+AGG | 0.534286 | 3_4:-1327419 | None:intergenic |
ATAGCCTGCCTTTCGACAGA+AGG | 0.534841 | 3_4:-1331042 | None:intergenic |
AAACCAGAATGAAACATCAA+AGG | 0.534896 | 3_4:+1327831 | Msa0484130:intron |
CCTTTGTGAACATGAACAAA+GGG | 0.537964 | 3_4:-1330463 | None:intergenic |
TTGTATGCTGACTTTGAAGC+CGG | 0.538574 | 3_4:+1330522 | Msa0484130:CDS |
TGTGATGAGAAGATGTTTGA+GGG | 0.539694 | 3_4:+1326416 | Msa0484130:CDS |
CAAATATATCTCACCACTAG+TGG | 0.541968 | 3_4:+1328778 | Msa0484130:CDS |
GATGATTCAGATGAAGGTGG+AGG | 0.542065 | 3_4:+1326917 | Msa0484130:CDS |
CGAGAAGCTAGCTGGAGGAG+GGG | 0.542133 | 3_4:+1330000 | Msa0484130:CDS |
GAAGCTAGCTGGAGGAGGGG+GGG | 0.542511 | 3_4:+1330003 | Msa0484130:CDS |
TAGGGTTGATGAGATGAATG+AGG | 0.544605 | 3_4:+1327078 | Msa0484130:CDS |
CCCTTTGTTCATGTTCACAA+AGG | 0.545734 | 3_4:+1330463 | Msa0484130:CDS |
CTTCGCCGCTTCGATTTCGG+AGG | 0.547781 | 3_4:-1326185 | None:intergenic |
AGAACTACCCCTCTTCTCAA+TGG | 0.550076 | 3_4:-1327425 | None:intergenic |
TTGTGATGCTGTTAACGAGA+AGG | 0.551658 | 3_4:+1330765 | Msa0484130:CDS |
AGAGAAAACAAGCAAGAGGA+GGG | 0.551896 | 3_4:+1330050 | Msa0484130:CDS |
GAGGTGATGGATAGACAAAG+TGG | 0.551935 | 3_4:+1327229 | Msa0484130:CDS |
GATGAAGATGAAGATGAAGA+AGG | 0.553242 | 3_4:+1326380 | Msa0484130:CDS |
ACGAGAAGCTAGCTGGAGGA+GGG | 0.553807 | 3_4:+1329999 | Msa0484130:CDS |
CTTGTGTTCAGCGAACTACT+CGG | 0.557963 | 3_4:+1330790 | Msa0484130:CDS |
TGAGGAGGTAGAGAATGGGT+TGG | 0.558041 | 3_4:+1327369 | Msa0484130:CDS |
AGAAGCTAGCTGGAGGAGGG+GGG | 0.558177 | 3_4:+1330002 | Msa0484130:CDS |
AGTTCAAAAGACTAAGGAGG+AGG | 0.558646 | 3_4:+1328353 | Msa0484130:CDS |
GATGCTGATGAAGTTAAAGA+TGG | 0.559581 | 3_4:+1326770 | Msa0484130:CDS |
GGTTAGATTAAAAGAAAAGC+AGG | 0.560581 | 3_4:+1330891 | Msa0484130:CDS |
TGTGGTTCCTGAAGGTGCCA+AGG | 0.561326 | 3_4:+1326328 | Msa0484130:CDS |
AAGAGAAAACAAGCAAGAGG+AGG | 0.561847 | 3_4:+1330049 | Msa0484130:CDS |
TCTAAGTTCAATGTTTCTGA+TGG | 0.562503 | 3_4:+1329470 | Msa0484130:CDS |
AACGAAGCAAGAAAAGATGA+AGG | 0.562945 | 3_4:+1328005 | Msa0484130:CDS |
GGATGGTGAAACTGATTTCG+TGG | 0.564249 | 3_4:+1329936 | Msa0484130:CDS |
GAAATACTATACTGCGGTGG+AGG | 0.565112 | 3_4:+1327195 | Msa0484130:CDS |
ACCGATCCTCGCAGGGAGGG+TGG | 0.565344 | 3_4:+1329647 | Msa0484130:CDS |
AGGTGTTGGAGGAGTTTCAT+CGG | 0.568238 | 3_4:+1327978 | Msa0484130:CDS |
TCCTTCAAAAGAAACTTCCC+GGG | 0.569388 | 3_4:+1330491 | Msa0484130:CDS |
AATCTATACTCGACAAGGAA+CGG | 0.569644 | 3_4:+1330674 | Msa0484130:CDS |
ATGTGATGAGAAGATGTTTG+AGG | 0.570719 | 3_4:+1326415 | Msa0484130:CDS |
AATGACGGAGAACAAAGAAA+GGG | 0.573908 | 3_4:+1328044 | Msa0484130:CDS |
AGTTCTTCTTCTAAACCGAA+TGG | 0.575236 | 3_4:+1327442 | Msa0484130:CDS |
TCTGATGAATGTGTGAATGT+TGG | 0.576166 | 3_4:+1327517 | Msa0484130:CDS |
ACTCCTTTGGCATAAAATGT+GGG | 0.576246 | 3_4:-1328155 | None:intergenic |
TGGTCCCTTCAGTGAGCAGA+TGG | 0.576518 | 3_4:-1331110 | None:intergenic |
ACAGCCACCACCAGTTTCTG+TGG | 0.577179 | 3_4:+1328287 | Msa0484130:CDS |
TCCGACTAAGCTAATTCCCT+CGG | 0.579125 | 3_4:-1330983 | None:intergenic |
GGGTTGTGAGGATGTTGAGA+AGG | 0.580661 | 3_4:+1326436 | Msa0484130:CDS |
AGCATACAATTTCTTAACCC+GGG | 0.580778 | 3_4:-1330508 | None:intergenic |
ATTGTTGGTGATTCTGATCG+AGG | 0.582181 | 3_4:+1327586 | Msa0484130:CDS |
TCGACAAGAGCTTGTTCCGA+GGG | 0.583139 | 3_4:+1330967 | Msa0484130:CDS |
GGAAAAGAAAAGTATCTCAA+AGG | 0.584035 | 3_4:+1327952 | Msa0484130:CDS |
TTATGTGAACGAGAAGGAGG+AGG | 0.584098 | 3_4:+1327138 | Msa0484130:CDS |
ATCGTCAATGGAAATTACCT+TGG | 0.584247 | 3_4:-1326345 | None:intergenic |
TTGTGTTCACAACAAGATGA+TGG | 0.584332 | 3_4:-1328692 | None:intergenic |
TGGTGAGATATATTTGATCT+CGG | 0.584667 | 3_4:-1328771 | None:intergenic |
TTAGCTTAGTCGGAGCATCA+AGG | 0.586839 | 3_4:+1330992 | Msa0484130:CDS |
TGAAACCAAAGAGTGTAGAA+AGG | 0.587670 | 3_4:+1327479 | Msa0484130:CDS |
AAGGAATCTATTGATAACAA+TGG | 0.588038 | 3_4:+1328111 | Msa0484130:CDS |
CAAGTAAGTAACAAACTCGC+AGG | 0.588500 | 3_4:-1329776 | None:intergenic |
GCTGATGTTGATGTTAAAGA+TGG | 0.589336 | 3_4:+1326806 | Msa0484130:CDS |
ATGGATGTTGATGATTGTGC+TGG | 0.590863 | 3_4:+1326869 | Msa0484130:CDS |
GATGCTGACGATGTTAAAGA+TGG | 0.591417 | 3_4:+1326839 | Msa0484130:CDS |
CCTCCTGTACCATTGAGAAG+AGG | 0.591447 | 3_4:+1327416 | Msa0484130:CDS |
ACATACCATCTGCTCACTGA+AGG | 0.592728 | 3_4:+1331105 | Msa0484130:CDS |
TGAATCAAAAGCTGTATCCA+AGG | 0.595663 | 3_4:+1327684 | Msa0484130:CDS |
TCATCGAAAACTAACAAACC+TGG | 0.596025 | 3_4:-1330154 | None:intergenic |
CTCTGAGCCTAAGCTGACAA+TGG | 0.601135 | 3_4:+1330600 | Msa0484130:CDS |
TTGCATTCGAGCAAAAGAGA+TGG | 0.601883 | 3_4:-1330634 | None:intergenic |
TATTTCTGAGAGGAATAATG+AGG | 0.601951 | 3_4:+1327252 | Msa0484130:CDS |
AGAATCAGAAGCTGTATCCA+AGG | 0.602483 | 3_4:+1328419 | Msa0484130:CDS |
ACAGATGCCATTGTCAGCTT+AGG | 0.602630 | 3_4:-1330607 | None:intergenic |
GAGTAAAACCGATCCTCGCA+GGG | 0.602674 | 3_4:+1329640 | Msa0484130:CDS |
ATCAGATAAAGAGAAAATGA+CGG | 0.602744 | 3_4:+1328029 | Msa0484130:CDS |
TTCTCTTAATTGGACCGACA+AGG | 0.604288 | 3_4:+1330846 | Msa0484130:CDS |
AAGGAAATTCTGTACATGGA+TGG | 0.606146 | 3_4:+1330865 | Msa0484130:CDS |
TTTCCCAATAGCATTGAGCA+AGG | 0.607321 | 3_4:-1328194 | None:intergenic |
TCAATGAAGATTGTGTTGAT+CGG | 0.608506 | 3_4:+1328256 | Msa0484130:CDS |
TGATGAAGAAATGGTGAGAG+AGG | 0.608733 | 3_4:+1327309 | Msa0484130:CDS |
ACCTTTGTGAACATGAACAA+AGG | 0.610077 | 3_4:-1330464 | None:intergenic |
CTCTTATGTGAACGAGAAGG+AGG | 0.610670 | 3_4:+1327135 | Msa0484130:CDS |
CTGTGGACACACCTCATGAA+CGG | 0.611712 | 3_4:+1328304 | Msa0484130:CDS |
TAGCTTAGTCGGAGCATCAA+GGG | 0.612230 | 3_4:+1330993 | Msa0484130:CDS |
AGGCTCCATATCCGTTCATG+AGG | 0.613795 | 3_4:-1328315 | None:intergenic |
AAAACCGATCCTCGCAGGGA+GGG | 0.615256 | 3_4:+1329644 | Msa0484130:CDS |
ATCCGCGTTGTATCCTTACT+AGG | 0.617817 | 3_4:-1329917 | None:intergenic |
TATGGAATCCTTCTGTCGAA+AGG | 0.620263 | 3_4:+1331034 | Msa0484130:CDS |
AGTGATGGTGATGATTCTGA+TGG | 0.620317 | 3_4:+1326998 | Msa0484130:CDS |
GTTGCCAAATTCAAATCCAA+AGG | 0.620484 | 3_4:+1327877 | Msa0484130:CDS |
GAGTTATCCGGTAAAGAGCA+TGG | 0.621350 | 3_4:+1329857 | Msa0484130:CDS |
GAAACCTTGCTTACCACTAG+TGG | 0.622153 | 3_4:-1328791 | None:intergenic |
CTCCTCTTATGTGAACGAGA+AGG | 0.622635 | 3_4:+1327132 | Msa0484130:CDS |
CATACCATCTGCTCACTGAA+GGG | 0.629058 | 3_4:+1331106 | Msa0484130:CDS |
ATCGACAAGAGCTTGTTCCG+AGG | 0.629517 | 3_4:+1330966 | Msa0484130:CDS |
TTCTGAGAGGAATAATGAGG+AGG | 0.635532 | 3_4:+1327255 | Msa0484130:CDS |
AAAAGTTCAAAAGACTAAGG+AGG | 0.636589 | 3_4:+1328350 | Msa0484130:CDS |
CCTCTTCTCAATGGTACAGG+AGG | 0.637497 | 3_4:-1327416 | None:intergenic |
TCTGCTCACTGAAGGGACCA+CGG | 0.640703 | 3_4:+1331113 | Msa0484130:CDS |
TAAGTGCGTAGTTCAGCCGA+AGG | 0.642447 | 3_4:+1331299 | Msa0484130:CDS |
GGTGATTCTGATGAGAGTGA+TGG | 0.648599 | 3_4:+1326983 | Msa0484130:CDS |
GGTGGAGGAGCTGGTGAGAG+AGG | 0.651556 | 3_4:+1327210 | Msa0484130:CDS |
CTCTTTCTATAACCTTCATG+GGG | 0.653016 | 3_4:-1329404 | None:intergenic |
GAAATGGTGAGAGAGGTGAA+GGG | 0.653648 | 3_4:+1327316 | Msa0484130:CDS |
GGAGGAAGACAACCAAACAA+TGG | 0.654290 | 3_4:-1326167 | None:intergenic |
TAGTAAGGATACAACGCGGA+TGG | 0.654590 | 3_4:+1329919 | Msa0484130:CDS |
GAAGATGTTTGAGGGTTGTG+AGG | 0.659468 | 3_4:+1326424 | Msa0484130:CDS |
TGATGATTCTGATGGAAGTG+AGG | 0.659828 | 3_4:+1327006 | Msa0484130:CDS |
AATTCTGTACATGGATGGCG+TGG | 0.663523 | 3_4:+1330870 | Msa0484130:CDS |
TCCTGTACCATTGAGAAGAG+GGG | 0.664104 | 3_4:+1327418 | Msa0484130:CDS |
ATTCGAGCAAAAGAGATGGA+TGG | 0.664944 | 3_4:-1330630 | None:intergenic |
AGAGGAATCTATACTCGACA+AGG | 0.667452 | 3_4:+1330669 | Msa0484130:CDS |
CTTCGATTGAATCCAAATGG+AGG | 0.668438 | 3_4:+1330706 | Msa0484130:CDS |
CTTAGAGCCATCAAAGAGCG+AGG | 0.670391 | 3_4:-1329453 | None:intergenic |
TTGTACGAGAAGCTAGCTGG+AGG | 0.670898 | 3_4:+1329995 | Msa0484130:CDS |
CTCCTGGAACCGGAAAGACA+AGG | 0.675210 | 3_4:+1329687 | Msa0484130:CDS |
GTGTCCACAGAAACTGGTGG+TGG | 0.675704 | 3_4:-1328291 | None:intergenic |
ACAAAGAAAGTAGCATTCTG+GGG | 0.677863 | 3_4:+1329960 | Msa0484130:CDS |
GTAGAGAAGAAGAAAACGGG+TGG | 0.679278 | 3_4:+1327169 | Msa0484130:CDS |
GTCTTCCTCCGAAATCGAAG+CGG | 0.680321 | 3_4:+1326180 | Msa0484130:CDS |
GACAAAGTGGTATTTCTGAG+AGG | 0.684569 | 3_4:+1327242 | Msa0484130:CDS |
ATGCAGCCACCCTCCCTGCG+AGG | 0.685159 | 3_4:-1329653 | None:intergenic |
GGTGAATATTGCAAATCATG+TGG | 0.696916 | 3_4:+1328737 | Msa0484130:CDS |
TAGAGAAGAAGAAAACGGGT+GGG | 0.700465 | 3_4:+1327170 | Msa0484130:CDS |
TAAAACCGATCCTCGCAGGG+AGG | 0.700738 | 3_4:+1329643 | Msa0484130:CDS |
TCAGTCCAAGAGTTGTGCTG+TGG | 0.701935 | 3_4:+1331215 | Msa0484130:CDS |
GCCGAAATACTATACTGCGG+TGG | 0.712410 | 3_4:+1327192 | Msa0484130:CDS |
TTAGCGACAGATGAAGCTAG+CGG | 0.717965 | 3_4:+1328665 | Msa0484130:CDS |
ATATTGCAAATCATGTGGCG+TGG | 0.766805 | 3_4:+1328742 | Msa0484130:CDS |
TGTGCTGGTGATGTTAACGA+CGG | 0.770408 | 3_4:+1326884 | Msa0484130:CDS |
TGGGCCGAAATACTATACTG+CGG | 0.809495 | 3_4:+1327189 | Msa0484130:CDS |
GAAAGTGATGAAGAACACTG+TGG | 0.844161 | 3_4:+1326728 | Msa0484130:CDS |
GGTGTGTCCACAGAAACTGG+TGG | 0.845721 | 3_4:-1328294 | None:intergenic |
GACCTAGTAAGGATACAACG+CGG | 0.871333 | 3_4:+1329915 | Msa0484130:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTTATATGTTTAAACTT+TGG | + | chr3_4:1327799-1327818 | Msa0484130:intron | 10.0% |
!!! | TTTTTTCTTTTTCTTATTTT+TGG | - | chr3_4:1330080-1330099 | None:intergenic | 10.0% |
!!! | TGCATATTAATTTTAATTTG+TGG | + | chr3_4:1327749-1327768 | Msa0484130:intron | 15.0% |
!! | TTGTTTATATGTTTAAACTT+TGG | + | chr3_4:1328545-1328564 | Msa0484130:intron | 15.0% |
!! | TGAATAGAAATTACAATTAA+AGG | - | chr3_4:1329057-1329076 | None:intergenic | 15.0% |
!!! | TAATTTAGAATTTAATACTG+TGG | + | chr3_4:1329168-1329187 | Msa0484130:intron | 15.0% |
!!! | AATTTAGAATTTAATACTGT+GGG | + | chr3_4:1329169-1329188 | Msa0484130:intron | 15.0% |
!! | ACAAATTTATGCAAATTATT+TGG | - | chr3_4:1329304-1329323 | None:intergenic | 15.0% |
!! | TTGATTCTATTTATGATTTA+TGG | + | chr3_4:1329331-1329350 | Msa0484130:intron | 15.0% |
!!! | AGATAAAAGCTTTATTGATT+TGG | + | chr3_4:1326961-1326980 | Msa0484130:CDS | 20.0% |
!!! | GATAAAAGCTTTATTGATTT+GGG | + | chr3_4:1326962-1326981 | Msa0484130:CDS | 20.0% |
!!! | TTATGATAATGATGAAGAAA+TGG | + | chr3_4:1327300-1327319 | Msa0484130:CDS | 20.0% |
!!! | AAAAAAGTGGAATTTTTAAG+AGG | + | chr3_4:1327341-1327360 | Msa0484130:CDS | 20.0% |
!!! | AATTTTTAAGAGGAAATATG+AGG | + | chr3_4:1327351-1327370 | Msa0484130:CDS | 20.0% |
!!! | AATTTTAATTTGTGGACTAT+AGG | + | chr3_4:1327757-1327776 | Msa0484130:intron | 20.0% |
!!! | AAATTTTAATGTTCTTAACG+AGG | - | chr3_4:1328452-1328471 | None:intergenic | 20.0% |
!!! | AATGTTAATTTGTGAACTAT+AGG | + | chr3_4:1328486-1328505 | Msa0484130:intron | 20.0% |
!!! | TTTAGCTCTTATATTTTTTC+AGG | + | chr3_4:1329232-1329251 | Msa0484130:intron | 20.0% |
! | CCATCAATGAAAATAACAAA+AGG | - | chr3_4:1326227-1326246 | None:intergenic | 25.0% |
!!! | CCTTTTGTTATTTTCATTGA+TGG | + | chr3_4:1326224-1326243 | Msa0484130:CDS | 25.0% |
!! | AATAAATGATGAACCTTTTG+TGG | + | chr3_4:1326310-1326329 | Msa0484130:CDS | 25.0% |
!! | GAAAAAGACGAAAATTTTGT+TGG | + | chr3_4:1326482-1326501 | Msa0484130:CDS | 25.0% |
! | CATCTGAATGTATTGAAATA+GGG | - | chr3_4:1326520-1326539 | None:intergenic | 25.0% |
! | TCATCTGAATGTATTGAAAT+AGG | - | chr3_4:1326521-1326540 | None:intergenic | 25.0% |
!!! | TATGAGTTTGCTGAAAAAAA+TGG | + | chr3_4:1326635-1326654 | Msa0484130:CDS | 25.0% |
! | GAAAAAAATGGAAACTTTGT+TGG | + | chr3_4:1326647-1326666 | Msa0484130:CDS | 25.0% |
! | CATCAGAATGTATTGAAATA+GGG | - | chr3_4:1326700-1326719 | None:intergenic | 25.0% |
! | TCATCAGAATGTATTGAAAT+AGG | - | chr3_4:1326701-1326720 | None:intergenic | 25.0% |
! | TGTTAAAGATGGAGAAAAAA+TGG | + | chr3_4:1326850-1326869 | Msa0484130:CDS | 25.0% |
! | AATTTCTTTGGATTTGTCTT+TGG | - | chr3_4:1327569-1327588 | None:intergenic | 25.0% |
!!! | GGAAAATATCAATTTGTTAC+AGG | + | chr3_4:1327607-1327626 | Msa0484130:CDS | 25.0% |
! | TTTAAATGTTCCTAAAGAGA+AGG | - | chr3_4:1327714-1327733 | None:intergenic | 25.0% |
! | ATCAGATAAAGAGAAAATGA+CGG | + | chr3_4:1328029-1328048 | Msa0484130:CDS | 25.0% |
! | AACAAAGAAAGGGATTATAA+AGG | + | chr3_4:1328054-1328073 | Msa0484130:CDS | 25.0% |
!! | AAGGAATCTATTGATAACAA+TGG | + | chr3_4:1328111-1328130 | Msa0484130:CDS | 25.0% |
!! | ATTTTTCTCAATGAAGAGAT+TGG | + | chr3_4:1328716-1328735 | Msa0484130:CDS | 25.0% |
! | TCTAATACTATTTAGTGTCA+TGG | - | chr3_4:1329205-1329224 | None:intergenic | 25.0% |
! | AGATTGTTCAAATTGTGAAA+TGG | - | chr3_4:1329836-1329855 | None:intergenic | 25.0% |
! | AGACCAATTATGCAAATTAA+CGG | - | chr3_4:1329888-1329907 | None:intergenic | 25.0% |
!!! | TTTGATGATTTTTTACGTTC+CGG | - | chr3_4:1330370-1330389 | None:intergenic | 25.0% |
!!! | AGCTTAATTGGTCTTTAATT+AGG | - | chr3_4:1330825-1330844 | None:intergenic | 25.0% |
! | AATTAAGAGAAGAGCTTAAT+TGG | - | chr3_4:1330837-1330856 | None:intergenic | 25.0% |
! | AATTAAGCTCTTCTCTTAAT+TGG | + | chr3_4:1330836-1330855 | Msa0484130:CDS | 25.0% |
AGCAAAAATGTTCCATTGTT+TGG | + | chr3_4:1326155-1326174 | Msa0484130:CDS | 30.0% | |
ATGAAGATGAAGATGAAGAA+GGG | + | chr3_4:1326381-1326400 | Msa0484130:CDS | 30.0% | |
TCAATACATTCAGATGAGTA+TGG | + | chr3_4:1326524-1326543 | Msa0484130:CDS | 30.0% | |
! | TGATAATGCTGATGATGAAA+AGG | + | chr3_4:1326601-1326620 | Msa0484130:CDS | 30.0% |
! | AACTTTGTTGGTGAAAAAAG+TGG | + | chr3_4:1326659-1326678 | Msa0484130:CDS | 30.0% |
TCAATACATTCTGATGAGTA+TGG | + | chr3_4:1326704-1326723 | Msa0484130:CDS | 30.0% | |
! | AGACTAGTGATGAAGATTTT+AGG | + | chr3_4:1327059-1327078 | Msa0484130:CDS | 30.0% |
! | GACTAGTGATGAAGATTTTA+GGG | + | chr3_4:1327060-1327079 | Msa0484130:CDS | 30.0% |
! | TATTTCTGAGAGGAATAATG+AGG | + | chr3_4:1327252-1327271 | Msa0484130:CDS | 30.0% |
!! | TTTTAAGAGGAAATATGAGG+AGG | + | chr3_4:1327354-1327373 | Msa0484130:CDS | 30.0% |
TTTGGATTTGTCTTTGGATT+TGG | - | chr3_4:1327563-1327582 | None:intergenic | 30.0% | |
GACAAATCCAAAGAAATTGT+TGG | + | chr3_4:1327571-1327590 | Msa0484130:CDS | 30.0% | |
AGAATCACCAACAATTTCTT+TGG | - | chr3_4:1327581-1327600 | None:intergenic | 30.0% | |
AAACCAGAATGAAACATCAA+AGG | + | chr3_4:1327831-1327850 | Msa0484130:intron | 30.0% | |
AACCAGAATGAAACATCAAA+GGG | + | chr3_4:1327832-1327851 | Msa0484130:intron | 30.0% | |
TTTGCCTTTGGATTTGAATT+TGG | - | chr3_4:1327884-1327903 | None:intergenic | 30.0% | |
ATTCACACAGTTATTAGGTT+TGG | - | chr3_4:1327914-1327933 | None:intergenic | 30.0% | |
!! | GGAAAAGAAAAGTATCTCAA+AGG | + | chr3_4:1327952-1327971 | Msa0484130:CDS | 30.0% |
!! | GAAAAGTATCTCAAAGGTTT+AGG | + | chr3_4:1327958-1327977 | Msa0484130:CDS | 30.0% |
TCTTCTTCTTCTTCTCAATA+GGG | - | chr3_4:1328092-1328111 | None:intergenic | 30.0% | |
TTCTTCTTCTTCTTCTCAAT+AGG | - | chr3_4:1328093-1328112 | None:intergenic | 30.0% | |
TATTGAGAAGAAGAAGAAGA+AGG | + | chr3_4:1328092-1328111 | Msa0484130:CDS | 30.0% | |
CACAATTGAATCTTTGTTCA+TGG | - | chr3_4:1328229-1328248 | None:intergenic | 30.0% | |
GAACAAAGATTCAATTGTGT+TGG | + | chr3_4:1328230-1328249 | Msa0484130:CDS | 30.0% | |
! | TCAATGAAGATTGTGTTGAT+CGG | + | chr3_4:1328256-1328275 | Msa0484130:CDS | 30.0% |
GGAAAAAGTTCAAAAGACTA+AGG | + | chr3_4:1328347-1328366 | Msa0484130:CDS | 30.0% | |
AAAAGTTCAAAAGACTAAGG+AGG | + | chr3_4:1328350-1328369 | Msa0484130:CDS | 30.0% | |
TGGTGAGATATATTTGATCT+CGG | - | chr3_4:1328774-1328793 | None:intergenic | 30.0% | |
!!! | CTTATTTTGAAGCTAGTTGT+TGG | + | chr3_4:1329029-1329048 | Msa0484130:intron | 30.0% |
AATTGAACCATGATGCTAAA+TGG | + | chr3_4:1329090-1329109 | Msa0484130:intron | 30.0% | |
AAAACAGAACTTGATTGTTG+AGG | + | chr3_4:1329275-1329294 | Msa0484130:intron | 30.0% | |
AAACAGAACTTGATTGTTGA+GGG | + | chr3_4:1329276-1329295 | Msa0484130:intron | 30.0% | |
TCTCTTTCTATAACCTTCAT+GGG | - | chr3_4:1329408-1329427 | None:intergenic | 30.0% | |
! | TCTAAGTTCAATGTTTCTGA+TGG | + | chr3_4:1329470-1329489 | Msa0484130:CDS | 30.0% |
TGAGTTCATTTGGAAAAACT+TGG | + | chr3_4:1329592-1329611 | Msa0484130:CDS | 30.0% | |
GGAAGATGAGTTCAAAAAAT+GGG | + | chr3_4:1329799-1329818 | Msa0484130:CDS | 30.0% | |
TTGAACAATCTTGAGTTATC+CGG | + | chr3_4:1329845-1329864 | Msa0484130:CDS | 30.0% | |
!! | ATGCCGTTAATTTGCATAAT+TGG | + | chr3_4:1329882-1329901 | Msa0484130:CDS | 30.0% |
TACAAAGAAAGTAGCATTCT+GGG | + | chr3_4:1329959-1329978 | Msa0484130:CDS | 30.0% | |
AAAAAGAGAAAACAAGCAAG+AGG | + | chr3_4:1330046-1330065 | Msa0484130:CDS | 30.0% | |
GAGAAATGGTTATATGAGAA+AGG | + | chr3_4:1330117-1330136 | Msa0484130:CDS | 30.0% | |
!!! | AGAAGACTTTTTTCACTTCT+CGG | - | chr3_4:1330190-1330209 | None:intergenic | 30.0% |
GAAGTGAAAAAAGTCTTCTT+TGG | + | chr3_4:1330191-1330210 | Msa0484130:CDS | 30.0% | |
!! | TCTTCTTTGGAATATGTTGT+TGG | + | chr3_4:1330204-1330223 | Msa0484130:CDS | 30.0% |
GTATAATCCGTTTGTTTGTT+TGG | - | chr3_4:1330234-1330253 | None:intergenic | 30.0% | |
!! | AACAAACGGATTATACTTTC+TGG | + | chr3_4:1330238-1330257 | Msa0484130:CDS | 30.0% |
! | ACCTTTTCAGAACAATTTCA+TGG | + | chr3_4:1330264-1330283 | Msa0484130:CDS | 30.0% |
!! | TCCATGAAATTGTTCTGAAA+AGG | - | chr3_4:1330268-1330287 | None:intergenic | 30.0% |
!!! | GATATCGTTTTAGGAAATGA+AGG | - | chr3_4:1330319-1330338 | None:intergenic | 30.0% |
AATCATCAAAAAAATCCAGC+TGG | + | chr3_4:1330380-1330399 | Msa0484130:CDS | 30.0% | |
ATCATCAAAAAAATCCAGCT+GGG | + | chr3_4:1330381-1330400 | Msa0484130:CDS | 30.0% | |
! | AGGTGTGAAAACCAAATTTT+TGG | + | chr3_4:1330726-1330745 | Msa0484130:CDS | 30.0% |
!! | TGTGAAAACCAAATTTTTGG+TGG | + | chr3_4:1330729-1330748 | Msa0484130:CDS | 30.0% |
AACAAACTCCACCAAAAATT+TGG | - | chr3_4:1330740-1330759 | None:intergenic | 30.0% | |
!!! | AATTTTTGGTGGAGTTTGTT+AGG | + | chr3_4:1330740-1330759 | Msa0484130:CDS | 30.0% |
GGTTAGATTAAAAGAAAAGC+AGG | + | chr3_4:1330891-1330910 | Msa0484130:CDS | 30.0% | |
GCACCTAAAATATTTCAAAC+AGG | + | chr3_4:1331137-1331156 | Msa0484130:CDS | 30.0% | |
CTTCAGCATGAAAAACTTAA+AGG | + | chr3_4:1331267-1331286 | Msa0484130:CDS | 30.0% | |
TTCATTGATGGAGATGATGA+TGG | + | chr3_4:1326236-1326255 | Msa0484130:CDS | 35.0% | |
ATCGTCAATGGAAATTACCT+TGG | - | chr3_4:1326348-1326367 | None:intergenic | 35.0% | |
TCCATTGACGATGATGATTA+TGG | + | chr3_4:1326356-1326375 | Msa0484130:CDS | 35.0% | |
ACCATAATCATCATCGTCAA+TGG | - | chr3_4:1326360-1326379 | None:intergenic | 35.0% | |
GATGAAGATGAAGATGAAGA+AGG | + | chr3_4:1326380-1326399 | Msa0484130:CDS | 35.0% | |
ATGTGATGAGAAGATGTTTG+AGG | + | chr3_4:1326415-1326434 | Msa0484130:CDS | 35.0% | |
TGTGATGAGAAGATGTTTGA+GGG | + | chr3_4:1326416-1326435 | Msa0484130:CDS | 35.0% | |
AGTGATGAAGAACACTCTAA+TGG | + | chr3_4:1326551-1326570 | Msa0484130:CDS | 35.0% | |
GATGCTGATGAAGTTAAAGA+TGG | + | chr3_4:1326770-1326789 | Msa0484130:CDS | 35.0% | |
GCTGATGTTGATGTTAAAGA+TGG | + | chr3_4:1326806-1326825 | Msa0484130:CDS | 35.0% | |
AAGAGTGATGATTCAGATGA+AGG | + | chr3_4:1326911-1326930 | Msa0484130:CDS | 35.0% | |
! | GATGAGATGAATGAGGTTTT+TGG | + | chr3_4:1327085-1327104 | Msa0484130:CDS | 35.0% |
GGAAGTAGAGAAGAAGAAAA+CGG | + | chr3_4:1327165-1327184 | Msa0484130:CDS | 35.0% | |
GAAGTAGAGAAGAAGAAAAC+GGG | + | chr3_4:1327166-1327185 | Msa0484130:CDS | 35.0% | |
AAATATGAGGAGGTAGAGAA+TGG | + | chr3_4:1327364-1327383 | Msa0484130:CDS | 35.0% | |
AATATGAGGAGGTAGAGAAT+GGG | + | chr3_4:1327365-1327384 | Msa0484130:CDS | 35.0% | |
AGTTCTTCTTCTAAACCGAA+TGG | + | chr3_4:1327442-1327461 | Msa0484130:CDS | 35.0% | |
! | TGAAACCAAAGAGTGTAGAA+AGG | + | chr3_4:1327479-1327498 | Msa0484130:CDS | 35.0% |
ACTTTCCTTTCTACACTCTT+TGG | - | chr3_4:1327487-1327506 | None:intergenic | 35.0% | |
TCTGATGAATGTGTGAATGT+TGG | + | chr3_4:1327517-1327536 | Msa0484130:CDS | 35.0% | |
!!! | TTTGGATTTGGCTTTTGACT+TGG | - | chr3_4:1327551-1327570 | None:intergenic | 35.0% |
TTTGTTACAGGCTTAGATGT+TGG | + | chr3_4:1327619-1327638 | Msa0484130:CDS | 35.0% | |
TGAATCAAAAGCTGTATCCA+AGG | + | chr3_4:1327684-1327703 | Msa0484130:CDS | 35.0% | |
! | TAATTTGTGGACTATAGGAC+TGG | + | chr3_4:1327762-1327781 | Msa0484130:intron | 35.0% |
TTCCCTTTGATGTTTCATTC+TGG | - | chr3_4:1327837-1327856 | None:intergenic | 35.0% | |
GTTGCCAAATTCAAATCCAA+AGG | + | chr3_4:1327877-1327896 | Msa0484130:CDS | 35.0% | |
GCAACATTCACACAGTTATT+AGG | - | chr3_4:1327919-1327938 | None:intergenic | 35.0% | |
! | AATGTTGCTGACTGTGATAT+AGG | + | chr3_4:1327931-1327950 | Msa0484130:CDS | 35.0% |
TATCTCAAAGGTTTAGGTGT+TGG | + | chr3_4:1327964-1327983 | Msa0484130:CDS | 35.0% | |
AACGAAGCAAGAAAAGATGA+AGG | + | chr3_4:1328005-1328024 | Msa0484130:CDS | 35.0% | |
! | AAATGACGGAGAACAAAGAA+AGG | + | chr3_4:1328043-1328062 | Msa0484130:CDS | 35.0% |
! | AATGACGGAGAACAAAGAAA+GGG | + | chr3_4:1328044-1328063 | Msa0484130:CDS | 35.0% |
ACTCCTTTGGCATAAAATGT+GGG | - | chr3_4:1328158-1328177 | None:intergenic | 35.0% | |
AACTCCTTTGGCATAAAATG+TGG | - | chr3_4:1328159-1328178 | None:intergenic | 35.0% | |
CAAAGATTCAATTGTGTTGG+AGG | + | chr3_4:1328233-1328252 | Msa0484130:CDS | 35.0% | |
!! | GAACTTTTTCCACCTTTTTG+AGG | - | chr3_4:1328338-1328357 | None:intergenic | 35.0% |
! | AGGAAGAGAATGAAGTGTTA+TGG | + | chr3_4:1328373-1328392 | Msa0484130:CDS | 35.0% |
! | GGAAGAGAATGAAGTGTTAT+GGG | + | chr3_4:1328374-1328393 | Msa0484130:CDS | 35.0% |
! | TGAAGTGTTATGGGATGAAT+TGG | + | chr3_4:1328383-1328402 | Msa0484130:CDS | 35.0% |
GATTCTCAATGCGATTTGTA+AGG | + | chr3_4:1328589-1328608 | Msa0484130:intron | 35.0% | |
TTGTGTTCACAACAAGATGA+TGG | - | chr3_4:1328695-1328714 | None:intergenic | 35.0% | |
GGTGAATATTGCAAATCATG+TGG | + | chr3_4:1328737-1328756 | Msa0484130:CDS | 35.0% | |
CAAATATATCTCACCACTAG+TGG | + | chr3_4:1328778-1328797 | Msa0484130:CDS | 35.0% | |
!! | TAGCGATCACTCTATTTTGA+AGG | + | chr3_4:1328975-1328994 | Msa0484130:intron | 35.0% |
!! | GATCACTCTATTTTGAAGGA+GGG | + | chr3_4:1328979-1328998 | Msa0484130:intron | 35.0% |
ACTACTACCATTTAGCATCA+TGG | - | chr3_4:1329100-1329119 | None:intergenic | 35.0% | |
ATTGATAGATTTCCCCATGA+AGG | + | chr3_4:1329392-1329411 | Msa0484130:CDS | 35.0% | |
CTCTTTCTATAACCTTCATG+GGG | - | chr3_4:1329407-1329426 | None:intergenic | 35.0% | |
CTCTCTTTCTATAACCTTCA+TGG | - | chr3_4:1329409-1329428 | None:intergenic | 35.0% | |
TCATAATGAACGCACTGTTT+GGG | + | chr3_4:1329514-1329533 | Msa0484130:CDS | 35.0% | |
CTTTCACATCATCAGGAATT+AGG | - | chr3_4:1329541-1329560 | None:intergenic | 35.0% | |
! | TTCTTTTTGATGAGGATACG+AGG | - | chr3_4:1329567-1329586 | None:intergenic | 35.0% |
TCGTATCCTCATCAAAAAGA+AGG | + | chr3_4:1329566-1329585 | Msa0484130:CDS | 35.0% | |
! | TCAAAGCCTTCTTTTTGATG+AGG | - | chr3_4:1329575-1329594 | None:intergenic | 35.0% |
!! | AAGAAGGCTTTGAGTTCATT+TGG | + | chr3_4:1329582-1329601 | Msa0484130:CDS | 35.0% |
TTCATTTGGAAAAACTTGGC+AGG | + | chr3_4:1329596-1329615 | Msa0484130:CDS | 35.0% | |
TATTGTCAACCTTGTCTTTC+CGG | - | chr3_4:1329699-1329718 | None:intergenic | 35.0% | |
!! | TGCGAGTTTGTTACTTACTT+GGG | + | chr3_4:1329778-1329797 | Msa0484130:CDS | 35.0% |
GGGAAGATGAGTTCAAAAAA+TGG | + | chr3_4:1329798-1329817 | Msa0484130:CDS | 35.0% | |
GTACAAAGAAAGTAGCATTC+TGG | + | chr3_4:1329958-1329977 | Msa0484130:CDS | 35.0% | |
ACAAAGAAAGTAGCATTCTG+GGG | + | chr3_4:1329960-1329979 | Msa0484130:CDS | 35.0% | |
TCATCGAAAACTAACAAACC+TGG | - | chr3_4:1330157-1330176 | None:intergenic | 35.0% | |
!!! | GGTTTGTTAGTTTTCGATGA+AGG | + | chr3_4:1330157-1330176 | Msa0484130:CDS | 35.0% |
TGGAGATCCAAACAAACAAA+CGG | + | chr3_4:1330224-1330243 | Msa0484130:CDS | 35.0% | |
CCTTTGTGAACATGAACAAA+GGG | - | chr3_4:1330466-1330485 | None:intergenic | 35.0% | |
ACCTTTGTGAACATGAACAA+AGG | - | chr3_4:1330467-1330486 | None:intergenic | 35.0% | |
ATCCTTCAAAAGAAACTTCC+CGG | + | chr3_4:1330490-1330509 | Msa0484130:CDS | 35.0% | |
AGCATACAATTTCTTAACCC+GGG | - | chr3_4:1330511-1330530 | None:intergenic | 35.0% | |
CAGCATACAATTTCTTAACC+CGG | - | chr3_4:1330512-1330531 | None:intergenic | 35.0% | |
! | TTTGCTCGAATGCAAACTTT+TGG | + | chr3_4:1330642-1330661 | Msa0484130:CDS | 35.0% |
AATCTATACTCGACAAGGAA+CGG | + | chr3_4:1330674-1330693 | Msa0484130:CDS | 35.0% | |
AAGCTTCGATTGAATCCAAA+TGG | + | chr3_4:1330703-1330722 | Msa0484130:CDS | 35.0% | |
TGGTCTTTAATTAGGCGTAA+AGG | - | chr3_4:1330817-1330836 | None:intergenic | 35.0% | |
CATGTACAGAATTTCCTTGT+CGG | - | chr3_4:1330863-1330882 | None:intergenic | 35.0% | |
AAGGAAATTCTGTACATGGA+TGG | + | chr3_4:1330865-1330884 | Msa0484130:CDS | 35.0% | |
!! | CGGCCTGTTTGAAATATTTT+AGG | - | chr3_4:1331143-1331162 | None:intergenic | 35.0% |
ATATTTCAAACAGGCCGAAA+AGG | + | chr3_4:1331146-1331165 | Msa0484130:CDS | 35.0% | |
AAAAGACGAGTTCAGATAAC+CGG | - | chr3_4:1331173-1331192 | None:intergenic | 35.0% | |
! | GTTATCTGAACTCGTCTTTT+CGG | + | chr3_4:1331173-1331192 | Msa0484130:CDS | 35.0% |
GAAAGTGATGAAGAACACTG+TGG | + | chr3_4:1326728-1326747 | Msa0484130:CDS | 40.0% | |
GATGCTGACGATGTTAAAGA+TGG | + | chr3_4:1326839-1326858 | Msa0484130:CDS | 40.0% | |
!! | ATGGATGTTGATGATTGTGC+TGG | + | chr3_4:1326869-1326888 | Msa0484130:CDS | 40.0% |
AGTGATGATTCAGATGAAGG+TGG | + | chr3_4:1326914-1326933 | Msa0484130:CDS | 40.0% | |
! | AGTGATGGTGATGATTCTGA+TGG | + | chr3_4:1326998-1327017 | Msa0484130:CDS | 40.0% |
TGATGATTCTGATGGAAGTG+AGG | + | chr3_4:1327006-1327025 | Msa0484130:CDS | 40.0% | |
!! | TAGGGTTGATGAGATGAATG+AGG | + | chr3_4:1327078-1327097 | Msa0484130:CDS | 40.0% |
TAGAGAAGAAGAAAACGGGT+GGG | + | chr3_4:1327170-1327189 | Msa0484130:CDS | 40.0% | |
TCCACCGCAGTATAGTATTT+CGG | - | chr3_4:1327196-1327215 | None:intergenic | 40.0% | |
! | GACAAAGTGGTATTTCTGAG+AGG | + | chr3_4:1327242-1327261 | Msa0484130:CDS | 40.0% |
! | TTCTGAGAGGAATAATGAGG+AGG | + | chr3_4:1327255-1327274 | Msa0484130:CDS | 40.0% |
TGATGAAGAAATGGTGAGAG+AGG | + | chr3_4:1327309-1327328 | Msa0484130:CDS | 40.0% | |
GAGGTGAAGGGTAAAAAAAG+TGG | + | chr3_4:1327328-1327347 | Msa0484130:CDS | 40.0% | |
AGTGTCTCTGATACTCCATT+CGG | - | chr3_4:1327460-1327479 | None:intergenic | 40.0% | |
!! | ATTGTTGGTGATTCTGATCG+AGG | + | chr3_4:1327586-1327605 | Msa0484130:CDS | 40.0% |
CCTAAAGAGAAGGATTACCT+TGG | - | chr3_4:1327704-1327723 | None:intergenic | 40.0% | |
CCAAGGTAATCCTTCTCTTT+AGG | + | chr3_4:1327701-1327720 | Msa0484130:intron | 40.0% | |
TTTGGCATTGTCTTTGCCTT+TGG | - | chr3_4:1327896-1327915 | None:intergenic | 40.0% | |
! | AAGCCCACATTTTATGCCAA+AGG | + | chr3_4:1328152-1328171 | Msa0484130:CDS | 40.0% |
AACTCCTTGCTCAATGCTAT+TGG | + | chr3_4:1328190-1328209 | Msa0484130:CDS | 40.0% | |
ACTCCTTGCTCAATGCTATT+GGG | + | chr3_4:1328191-1328210 | Msa0484130:CDS | 40.0% | |
! | TTTCCCAATAGCATTGAGCA+AGG | - | chr3_4:1328197-1328216 | None:intergenic | 40.0% |
AGTTCAAAAGACTAAGGAGG+AGG | + | chr3_4:1328353-1328372 | Msa0484130:CDS | 40.0% | |
AGAATCAGAAGCTGTATCCA+AGG | + | chr3_4:1328419-1328438 | Msa0484130:CDS | 40.0% | |
CTTAACGAGGATGATTACCT+TGG | - | chr3_4:1328439-1328458 | None:intergenic | 40.0% | |
ATATTGCAAATCATGTGGCG+TGG | + | chr3_4:1328742-1328761 | Msa0484130:CDS | 40.0% | |
TTGTCTAATTGCGGCTAAAG+CGG | + | chr3_4:1328916-1328935 | Msa0484130:intron | 40.0% | |
!! | CGATCACTCTATTTTGAAGG+AGG | + | chr3_4:1328978-1328997 | Msa0484130:intron | 40.0% |
CTCATAATGAACGCACTGTT+TGG | + | chr3_4:1329513-1329532 | Msa0484130:CDS | 40.0% | |
GAGGTTTCTTTCACATCATC+AGG | - | chr3_4:1329548-1329567 | None:intergenic | 40.0% | |
AGTGTTTCCTAAATGCTTGC+CGG | + | chr3_4:1329742-1329761 | Msa0484130:CDS | 40.0% | |
ACAATAACCGGCAAGCATTT+AGG | - | chr3_4:1329752-1329771 | None:intergenic | 40.0% | |
CAAGTAAGTAACAAACTCGC+AGG | - | chr3_4:1329779-1329798 | None:intergenic | 40.0% | |
!! | CTGCGAGTTTGTTACTTACT+TGG | + | chr3_4:1329777-1329796 | Msa0484130:CDS | 40.0% |
GAGTTCAAAAAATGGGACGT+TGG | + | chr3_4:1329806-1329825 | Msa0484130:CDS | 40.0% | |
AAGAGAAAACAAGCAAGAGG+AGG | + | chr3_4:1330049-1330068 | Msa0484130:CDS | 40.0% | |
AGAGAAAACAAGCAAGAGGA+GGG | + | chr3_4:1330050-1330069 | Msa0484130:CDS | 40.0% | |
! | AAGGTTTTACTTGAAGCTCC+AGG | + | chr3_4:1330136-1330155 | Msa0484130:CDS | 40.0% |
! | GAAAAACTTTTGCCAGAAGC+CGG | + | chr3_4:1330348-1330367 | Msa0484130:CDS | 40.0% |
!!! | ATTTTTTACGTTCCGGCTTC+TGG | - | chr3_4:1330363-1330382 | None:intergenic | 40.0% |
AAAAAAATCCAGCTGGGAAC+TGG | + | chr3_4:1330387-1330406 | Msa0484130:CDS | 40.0% | |
CAAGCAGTTGAAGTTGCTTA+TGG | + | chr3_4:1330438-1330457 | Msa0484130:CDS | 40.0% | |
CCCTTTGTTCATGTTCACAA+AGG | + | chr3_4:1330463-1330482 | Msa0484130:CDS | 40.0% | |
TCCTTCAAAAGAAACTTCCC+GGG | + | chr3_4:1330491-1330510 | Msa0484130:CDS | 40.0% | |
!! | TTGTATGCTGACTTTGAAGC+CGG | + | chr3_4:1330522-1330541 | Msa0484130:CDS | 40.0% |
! | GTTTGCTTCTGAAAACTGTC+CGG | - | chr3_4:1330544-1330563 | None:intergenic | 40.0% |
ATTCGAGCAAAAGAGATGGA+TGG | - | chr3_4:1330633-1330652 | None:intergenic | 40.0% | |
TTGCATTCGAGCAAAAGAGA+TGG | - | chr3_4:1330637-1330656 | None:intergenic | 40.0% | |
!! | ATGCAAACTTTTGGAGGAAG+AGG | + | chr3_4:1330651-1330670 | Msa0484130:CDS | 40.0% |
AGAGGAATCTATACTCGACA+AGG | + | chr3_4:1330669-1330688 | Msa0484130:CDS | 40.0% | |
CTTCGATTGAATCCAAATGG+AGG | + | chr3_4:1330706-1330725 | Msa0484130:CDS | 40.0% | |
!! | TTGGTTTTCACACCTCCATT+TGG | - | chr3_4:1330721-1330740 | None:intergenic | 40.0% |
TTGTGATGCTGTTAACGAGA+AGG | + | chr3_4:1330765-1330784 | Msa0484130:CDS | 40.0% | |
TTCTCTTAATTGGACCGACA+AGG | + | chr3_4:1330846-1330865 | Msa0484130:CDS | 40.0% | |
CGACAAGGAAATTCTGTACA+TGG | + | chr3_4:1330861-1330880 | Msa0484130:CDS | 40.0% | |
AGTTTGCATCGTTGAAGCTA+TGG | - | chr3_4:1330924-1330943 | None:intergenic | 40.0% | |
TATGGAATCCTTCTGTCGAA+AGG | + | chr3_4:1331034-1331053 | Msa0484130:CDS | 40.0% | |
ATCAGCAGAGCATATAGGAT+TGG | + | chr3_4:1331063-1331082 | Msa0484130:CDS | 40.0% | |
!! | GAAATATTTTAGGTGCTCCG+TGG | - | chr3_4:1331133-1331152 | None:intergenic | 40.0% |
! | TTCAGATAACCGGTCCTTTT+CGG | - | chr3_4:1331163-1331182 | None:intergenic | 40.0% |
! | CGAGATTTTGTCGAGAGTTT+CGG | + | chr3_4:1331324-1331343 | Msa0484130:CDS | 40.0% |
GGAGGAAGACAACCAAACAA+TGG | - | chr3_4:1326170-1326189 | None:intergenic | 45.0% | |
TTTCTTCGCCGCTTCGATTT+CGG | - | chr3_4:1326191-1326210 | None:intergenic | 45.0% | |
! | GAACCTTTTGTGGTTCCTGA+AGG | + | chr3_4:1326320-1326339 | Msa0484130:CDS | 45.0% |
GAAATTACCTTGGCACCTTC+AGG | - | chr3_4:1326338-1326357 | None:intergenic | 45.0% | |
GAAGATGTTTGAGGGTTGTG+AGG | + | chr3_4:1326424-1326443 | Msa0484130:CDS | 45.0% | |
! | TGTGCTGGTGATGTTAACGA+CGG | + | chr3_4:1326884-1326903 | Msa0484130:CDS | 45.0% |
GATGATTCAGATGAAGGTGG+AGG | + | chr3_4:1326917-1326936 | Msa0484130:CDS | 45.0% | |
GGTGATTCTGATGAGAGTGA+TGG | + | chr3_4:1326983-1327002 | Msa0484130:CDS | 45.0% | |
TCTGATGGAAGTGAGGATTC+TGG | + | chr3_4:1327013-1327032 | Msa0484130:CDS | 45.0% | |
CTCCTCTTATGTGAACGAGA+AGG | + | chr3_4:1327132-1327151 | Msa0484130:CDS | 45.0% | |
CTCCTTCTCGTTCACATAAG+AGG | - | chr3_4:1327137-1327156 | None:intergenic | 45.0% | |
CTCTTATGTGAACGAGAAGG+AGG | + | chr3_4:1327135-1327154 | Msa0484130:CDS | 45.0% | |
TTATGTGAACGAGAAGGAGG+AGG | + | chr3_4:1327138-1327157 | Msa0484130:CDS | 45.0% | |
GTAGAGAAGAAGAAAACGGG+TGG | + | chr3_4:1327169-1327188 | Msa0484130:CDS | 45.0% | |
TGGGCCGAAATACTATACTG+CGG | + | chr3_4:1327189-1327208 | Msa0484130:CDS | 45.0% | |
GAAATACTATACTGCGGTGG+AGG | + | chr3_4:1327195-1327214 | Msa0484130:CDS | 45.0% | |
!! | GAGGTGATGGATAGACAAAG+TGG | + | chr3_4:1327229-1327248 | Msa0484130:CDS | 45.0% |
AGAAATGGTGAGAGAGGTGA+AGG | + | chr3_4:1327315-1327334 | Msa0484130:CDS | 45.0% | |
GAAATGGTGAGAGAGGTGAA+GGG | + | chr3_4:1327316-1327335 | Msa0484130:CDS | 45.0% | |
CTCCTGTACCATTGAGAAGA+GGG | + | chr3_4:1327417-1327436 | Msa0484130:CDS | 45.0% | |
TCCTGTACCATTGAGAAGAG+GGG | + | chr3_4:1327418-1327437 | Msa0484130:CDS | 45.0% | |
AGAACTACCCCTCTTCTCAA+TGG | - | chr3_4:1327428-1327447 | None:intergenic | 45.0% | |
GTTACAGGCTTAGATGTTGG+AGG | + | chr3_4:1327622-1327641 | Msa0484130:CDS | 45.0% | |
!! | CTCAAAGGTTTAGGTGTTGG+AGG | + | chr3_4:1327967-1327986 | Msa0484130:CDS | 45.0% |
!! | AGGTGTTGGAGGAGTTTCAT+CGG | + | chr3_4:1327978-1327997 | Msa0484130:CDS | 45.0% |
TCGAGTGAACACAACTCCTT+TGG | - | chr3_4:1328171-1328190 | None:intergenic | 45.0% | |
ACACACCTCATGAACGGATA+TGG | + | chr3_4:1328310-1328329 | Msa0484130:CDS | 45.0% | |
ACGGATATGGAGCCTCAAAA+AGG | + | chr3_4:1328323-1328342 | Msa0484130:CDS | 45.0% | |
GATATGGAGCCTCAAAAAGG+TGG | + | chr3_4:1328326-1328345 | Msa0484130:CDS | 45.0% | |
! | GTGTGTTACTGTCTGCAGAT+TGG | + | chr3_4:1328638-1328657 | Msa0484130:intron | 45.0% |
TTAGCGACAGATGAAGCTAG+CGG | + | chr3_4:1328665-1328684 | Msa0484130:CDS | 45.0% | |
GAAACCTTGCTTACCACTAG+TGG | - | chr3_4:1328794-1328813 | None:intergenic | 45.0% | |
! | TGGCAAGCGTTGTCTAATTG+CGG | + | chr3_4:1328907-1328926 | Msa0484130:intron | 45.0% |
GTAAATGCCTCGCTCTTTGA+TGG | + | chr3_4:1329446-1329465 | Msa0484130:CDS | 45.0% | |
GAGTTATCCGGTAAAGAGCA+TGG | + | chr3_4:1329857-1329876 | Msa0484130:CDS | 45.0% | |
GTCTAATGCACGACCTAGTA+AGG | + | chr3_4:1329904-1329923 | Msa0484130:CDS | 45.0% | |
GACCTAGTAAGGATACAACG+CGG | + | chr3_4:1329915-1329934 | Msa0484130:CDS | 45.0% | |
ATCCGCGTTGTATCCTTACT+AGG | - | chr3_4:1329920-1329939 | None:intergenic | 45.0% | |
TAGTAAGGATACAACGCGGA+TGG | + | chr3_4:1329919-1329938 | Msa0484130:CDS | 45.0% | |
! | GGATGGTGAAACTGATTTCG+TGG | + | chr3_4:1329936-1329955 | Msa0484130:CDS | 45.0% |
AGTTTGTACGAGAAGCTAGC+TGG | + | chr3_4:1329992-1330011 | Msa0484130:CDS | 45.0% | |
GCAAGTGCAGAGAAGAGAAA+TGG | + | chr3_4:1330103-1330122 | Msa0484130:CDS | 45.0% | |
! | AGCTCGAGCGATATCGTTTT+AGG | - | chr3_4:1330328-1330347 | None:intergenic | 45.0% |
! | ACCCGGGAAGTTTCTTTTGA+AGG | - | chr3_4:1330495-1330514 | None:intergenic | 45.0% |
ACAGATGCCATTGTCAGCTT+AGG | - | chr3_4:1330610-1330629 | None:intergenic | 45.0% | |
! | GCTCGAATGCAAACTTTTGG+AGG | + | chr3_4:1330645-1330664 | Msa0484130:CDS | 45.0% |
CTTGTGTTCAGCGAACTACT+CGG | + | chr3_4:1330790-1330809 | Msa0484130:CDS | 45.0% | |
AATTCTGTACATGGATGGCG+TGG | + | chr3_4:1330870-1330889 | Msa0484130:CDS | 45.0% | |
! | TCCGAGGGAATTAGCTTAGT+CGG | + | chr3_4:1330982-1331001 | Msa0484130:CDS | 45.0% |
TCCGACTAAGCTAATTCCCT+CGG | - | chr3_4:1330986-1331005 | None:intergenic | 45.0% | |
! | TTAGCTTAGTCGGAGCATCA+AGG | + | chr3_4:1330992-1331011 | Msa0484130:CDS | 45.0% |
! | TAGCTTAGTCGGAGCATCAA+GGG | + | chr3_4:1330993-1331012 | Msa0484130:CDS | 45.0% |
! | TTGTGCTGCTCGATGTTGTA+TGG | + | chr3_4:1331016-1331035 | Msa0484130:CDS | 45.0% |
AGGCTATCAGCAGAGCATAT+AGG | + | chr3_4:1331058-1331077 | Msa0484130:CDS | 45.0% | |
ACATACCATCTGCTCACTGA+AGG | + | chr3_4:1331105-1331124 | Msa0484130:CDS | 45.0% | |
CATACCATCTGCTCACTGAA+GGG | + | chr3_4:1331106-1331125 | Msa0484130:CDS | 45.0% | |
AAAGTCCACAGCACAACTCT+TGG | - | chr3_4:1331223-1331242 | None:intergenic | 45.0% | |
TCGACAAAATCTCGCTCCTT+CGG | - | chr3_4:1331318-1331337 | None:intergenic | 45.0% | |
GTCTTCCTCCGAAATCGAAG+CGG | + | chr3_4:1326180-1326199 | Msa0484130:CDS | 50.0% | |
GCACCTTCAGGAACCACAAA+AGG | - | chr3_4:1326326-1326345 | None:intergenic | 50.0% | |
GGGTTGTGAGGATGTTGAGA+AGG | + | chr3_4:1326436-1326455 | Msa0484130:CDS | 50.0% | |
GCCGAAATACTATACTGCGG+TGG | + | chr3_4:1327192-1327211 | Msa0484130:CDS | 50.0% | |
TGAGGAGGTAGAGAATGGGT+TGG | + | chr3_4:1327369-1327388 | Msa0484130:CDS | 50.0% | |
CCTCTTCTCAATGGTACAGG+AGG | - | chr3_4:1327419-1327438 | None:intergenic | 50.0% | |
CCTCCTGTACCATTGAGAAG+AGG | + | chr3_4:1327416-1327435 | Msa0484130:CDS | 50.0% | |
ACCCCTCTTCTCAATGGTAC+AGG | - | chr3_4:1327422-1327441 | None:intergenic | 50.0% | |
TGAGGTGTGTCCACAGAAAC+TGG | - | chr3_4:1328300-1328319 | None:intergenic | 50.0% | |
CTGTGGACACACCTCATGAA+CGG | + | chr3_4:1328304-1328323 | Msa0484130:CDS | 50.0% | |
AGGCTCCATATCCGTTCATG+AGG | - | chr3_4:1328318-1328337 | None:intergenic | 50.0% | |
CTCACCACTAGTGGTAAGCA+AGG | + | chr3_4:1328787-1328806 | Msa0484130:intron | 50.0% | |
GCGTGTTGTGGAACAAACAG+TGG | - | chr3_4:1328877-1328896 | None:intergenic | 50.0% | |
CTTAGAGCCATCAAAGAGCG+AGG | - | chr3_4:1329456-1329475 | None:intergenic | 50.0% | |
TGAGTAAAACCGATCCTCGC+AGG | + | chr3_4:1329639-1329658 | Msa0484130:CDS | 50.0% | |
GAGTAAAACCGATCCTCGCA+GGG | + | chr3_4:1329640-1329659 | Msa0484130:CDS | 50.0% | |
TGCATTATCTCCCATGCTCC+TGG | + | chr3_4:1329671-1329690 | Msa0484130:CDS | 50.0% | |
AACCTTGTCTTTCCGGTTCC+AGG | - | chr3_4:1329692-1329711 | None:intergenic | 50.0% | |
CTCGCAGGAGCAACAATAAC+CGG | - | chr3_4:1329764-1329783 | None:intergenic | 50.0% | |
GGCATCACCATGCTCTTTAC+CGG | - | chr3_4:1329867-1329886 | None:intergenic | 50.0% | |
TTGTACGAGAAGCTAGCTGG+AGG | + | chr3_4:1329995-1330014 | Msa0484130:CDS | 50.0% | |
CTCTGAGCCTAAGCTGACAA+TGG | + | chr3_4:1330600-1330619 | Msa0484130:CDS | 50.0% | |
! | ATCGACAAGAGCTTGTTCCG+AGG | + | chr3_4:1330966-1330985 | Msa0484130:CDS | 50.0% |
! | TCGACAAGAGCTTGTTCCGA+GGG | + | chr3_4:1330967-1330986 | Msa0484130:CDS | 50.0% |
GAATCCTTCTGTCGAAAGGC+AGG | + | chr3_4:1331038-1331057 | Msa0484130:CDS | 50.0% | |
ATAGCCTGCCTTTCGACAGA+AGG | - | chr3_4:1331045-1331064 | None:intergenic | 50.0% | |
TCAAACAGGCCGAAAAGGAC+CGG | + | chr3_4:1331151-1331170 | Msa0484130:CDS | 50.0% | |
TCAGTCCAAGAGTTGTGCTG+TGG | + | chr3_4:1331215-1331234 | Msa0484130:CDS | 50.0% | |
TAAGTGCGTAGTTCAGCCGA+AGG | + | chr3_4:1331299-1331318 | Msa0484130:CDS | 50.0% | |
!! | TGTGGTTCCTGAAGGTGCCA+AGG | + | chr3_4:1326328-1326347 | Msa0484130:CDS | 55.0% |
GAACGAGAAGGAGGAGGAAG+CGG | + | chr3_4:1327144-1327163 | Msa0484130:CDS | 55.0% | |
ACAGCCACCACCAGTTTCTG+TGG | + | chr3_4:1328287-1328306 | Msa0484130:CDS | 55.0% | |
GTGTCCACAGAAACTGGTGG+TGG | - | chr3_4:1328294-1328313 | None:intergenic | 55.0% | |
GGTGTGTCCACAGAAACTGG+TGG | - | chr3_4:1328297-1328316 | None:intergenic | 55.0% | |
!! | CATTGACTCGCTGCGTGTTG+TGG | - | chr3_4:1328889-1328908 | None:intergenic | 55.0% |
CACAACACGCAGCGAGTCAA+TGG | + | chr3_4:1328887-1328906 | Msa0484130:intron | 55.0% | |
TAAAACCGATCCTCGCAGGG+AGG | + | chr3_4:1329643-1329662 | Msa0484130:CDS | 55.0% | |
AAAACCGATCCTCGCAGGGA+GGG | + | chr3_4:1329644-1329663 | Msa0484130:CDS | 55.0% | |
ATCTCCCATGCTCCTGGAAC+CGG | + | chr3_4:1329677-1329696 | Msa0484130:CDS | 55.0% | |
! | CTTTCCGGTTCCAGGAGCAT+GGG | - | chr3_4:1329684-1329703 | None:intergenic | 55.0% |
TCTTTCCGGTTCCAGGAGCA+TGG | - | chr3_4:1329685-1329704 | None:intergenic | 55.0% | |
CTCCTGGAACCGGAAAGACA+AGG | + | chr3_4:1329687-1329706 | Msa0484130:CDS | 55.0% | |
TACGAGAAGCTAGCTGGAGG+AGG | + | chr3_4:1329998-1330017 | Msa0484130:CDS | 55.0% | |
ACGAGAAGCTAGCTGGAGGA+GGG | + | chr3_4:1329999-1330018 | Msa0484130:CDS | 55.0% | |
TCCAGCTGGGAACTGGATTC+TGG | + | chr3_4:1330394-1330413 | Msa0484130:CDS | 55.0% | |
CCAGCTGGGAACTGGATTCT+GGG | + | chr3_4:1330395-1330414 | Msa0484130:CDS | 55.0% | |
TGGTCCCTTCAGTGAGCAGA+TGG | - | chr3_4:1331113-1331132 | None:intergenic | 55.0% | |
TCTGCTCACTGAAGGGACCA+CGG | + | chr3_4:1331113-1331132 | Msa0484130:CDS | 55.0% | |
CTTCGCCGCTTCGATTTCGG+AGG | - | chr3_4:1326188-1326207 | None:intergenic | 60.0% | |
CTATACTGCGGTGGAGGAGC+TGG | + | chr3_4:1327201-1327220 | Msa0484130:CDS | 60.0% | |
GGAGCTGGTGAGAGAGGTGA+TGG | + | chr3_4:1327216-1327235 | Msa0484130:CDS | 60.0% | |
CGAGAAGCTAGCTGGAGGAG+GGG | + | chr3_4:1330000-1330019 | Msa0484130:CDS | 60.0% | |
GAGAAGCTAGCTGGAGGAGG+GGG | + | chr3_4:1330001-1330020 | Msa0484130:CDS | 60.0% | |
AGAAGCTAGCTGGAGGAGGG+GGG | + | chr3_4:1330002-1330021 | Msa0484130:CDS | 60.0% | |
CCCAGAATCCAGTTCCCAGC+TGG | - | chr3_4:1330398-1330417 | None:intergenic | 60.0% | |
GGTGGAGGAGCTGGTGAGAG+AGG | + | chr3_4:1327210-1327229 | Msa0484130:CDS | 65.0% | |
GAAGCTAGCTGGAGGAGGGG+GGG | + | chr3_4:1330003-1330022 | Msa0484130:CDS | 65.0% | |
ACCGATCCTCGCAGGGAGGG+TGG | + | chr3_4:1329647-1329666 | Msa0484130:CDS | 70.0% | |
GCCACCCTCCCTGCGAGGAT+CGG | - | chr3_4:1329651-1329670 | None:intergenic | 70.0% | |
ATGCAGCCACCCTCCCTGCG+AGG | - | chr3_4:1329656-1329675 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 1326128 | 1331353 | 1326128 | ID=Msa0484130;Name=Msa0484130 |
chr3_4 | mRNA | 1326128 | 1331353 | 1326128 | ID=Msa0484130-mRNA-1;Parent=Msa0484130;Name=Msa0484130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|1428 |
chr3_4 | exon | 1326128 | 1327705 | 1326128 | ID=Msa0484130-mRNA-1:exon:372;Parent=Msa0484130-mRNA-1 |
chr3_4 | exon | 1327838 | 1328440 | 1327838 | ID=Msa0484130-mRNA-1:exon:373;Parent=Msa0484130-mRNA-1 |
chr3_4 | exon | 1328656 | 1328799 | 1328656 | ID=Msa0484130-mRNA-1:exon:374;Parent=Msa0484130-mRNA-1 |
chr3_4 | exon | 1329392 | 1331353 | 1329392 | ID=Msa0484130-mRNA-1:exon:375;Parent=Msa0484130-mRNA-1 |
chr3_4 | CDS | 1326128 | 1327705 | 1326128 | ID=Msa0484130-mRNA-1:cds;Parent=Msa0484130-mRNA-1 |
chr3_4 | CDS | 1327838 | 1328440 | 1327838 | ID=Msa0484130-mRNA-1:cds;Parent=Msa0484130-mRNA-1 |
chr3_4 | CDS | 1328656 | 1328799 | 1328656 | ID=Msa0484130-mRNA-1:cds;Parent=Msa0484130-mRNA-1 |
chr3_4 | CDS | 1329392 | 1331353 | 1329392 | ID=Msa0484130-mRNA-1:cds;Parent=Msa0484130-mRNA-1 |
Gene Sequence |
Protein sequence |