Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486270 | XP_013460192.1 | 98.201 | 389 | 6 | 1 | 1 | 388 | 1 | 389 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486270 | G7ZYI5 | 98.201 | 389 | 6 | 1 | 1 | 388 | 1 | 389 | 0.0 | 791 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0486270 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486270 | MtrunA17_Chr3g0104431 | 98.201 | 389 | 6 | 1 | 1 | 388 | 1 | 389 | 0.0 | 791 |
| Msa0486270 | MtrunA17_Chr3g0114991 | 49.393 | 247 | 110 | 10 | 146 | 386 | 212 | 449 | 2.30e-63 | 209 |
| Msa0486270 | MtrunA17_Chr1g0156521 | 44.800 | 250 | 112 | 9 | 147 | 388 | 170 | 401 | 1.85e-58 | 195 |
| Msa0486270 | MtrunA17_Chr4g0042091 | 44.583 | 240 | 116 | 8 | 153 | 385 | 205 | 434 | 2.62e-56 | 191 |
| Msa0486270 | MtrunA17_Chr2g0280501 | 35.472 | 265 | 152 | 6 | 132 | 386 | 120 | 375 | 2.90e-43 | 154 |
| Msa0486270 | MtrunA17_Chr8g0376191 | 41.714 | 175 | 90 | 4 | 216 | 388 | 2 | 166 | 6.32e-33 | 121 |
| Msa0486270 | MtrunA17_Chr5g0399041 | 37.963 | 216 | 98 | 7 | 175 | 386 | 105 | 288 | 2.75e-30 | 117 |
| Msa0486270 | MtrunA17_Chr4g0056461 | 36.620 | 213 | 98 | 7 | 178 | 388 | 98 | 275 | 1.58e-29 | 115 |
| Msa0486270 | MtrunA17_Chr5g0445321 | 31.220 | 205 | 112 | 9 | 191 | 387 | 1 | 184 | 2.97e-20 | 87.4 |
| Msa0486270 | MtrunA17_Chr2g0280521 | 41.071 | 112 | 63 | 2 | 183 | 293 | 11 | 120 | 1.46e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486270 | AT2G29660.1 | 55.015 | 329 | 123 | 8 | 73 | 388 | 57 | 373 | 1.21e-110 | 329 |
| Msa0486270 | AT4G27240.1 | 41.577 | 279 | 137 | 8 | 115 | 385 | 168 | 428 | 2.47e-57 | 193 |
| Msa0486270 | AT5G54630.1 | 41.791 | 268 | 123 | 9 | 133 | 385 | 220 | 469 | 4.31e-57 | 194 |
| Msa0486270 | AT1G75710.1 | 42.391 | 276 | 115 | 10 | 144 | 388 | 197 | 459 | 1.36e-56 | 192 |
| Msa0486270 | AT4G27240.2 | 41.270 | 252 | 124 | 7 | 115 | 357 | 168 | 404 | 8.60e-49 | 171 |
| Msa0486270 | AT1G11490.2 | 35.223 | 247 | 141 | 8 | 150 | 386 | 126 | 363 | 6.31e-35 | 132 |
| Msa0486270 | AT1G11490.1 | 35.223 | 247 | 141 | 8 | 150 | 386 | 126 | 363 | 6.31e-35 | 132 |
| Msa0486270 | AT4G22560.1 | 34.025 | 241 | 110 | 10 | 153 | 388 | 68 | 264 | 1.67e-27 | 110 |
| Msa0486270 | AT1G62520.1 | 32.710 | 214 | 110 | 6 | 176 | 388 | 100 | 280 | 8.18e-23 | 97.4 |
| Msa0486270 | AT4G12450.1 | 30.000 | 280 | 129 | 9 | 118 | 388 | 56 | 277 | 1.99e-22 | 96.3 |
Find 111 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCGAGGAGGTTTGGTTTC+TGG | 0.131791 | 3_4:+4137008 | None:intergenic |
| ATAAAACTCTTTCTTCTTCT+TGG | 0.198943 | 3_4:-4137291 | Msa0486270:CDS |
| TTTGGGAAGGTGTTTGTTTC+GGG | 0.206736 | 3_4:+4136896 | None:intergenic |
| TCTGGCTGTTATGGATCTTC+AGG | 0.257483 | 3_4:+4136861 | None:intergenic |
| GTTTGGGAAGGTGTTTGTTT+CGG | 0.289642 | 3_4:+4136895 | None:intergenic |
| GGTGAAGAGGGTTGTGATAA+AGG | 0.305338 | 3_4:+4137337 | None:intergenic |
| TTCAGGATTCGGTGTATGTT+TGG | 0.313472 | 3_4:+4136878 | None:intergenic |
| ATTTGTGGAATTATTAAATC+AGG | 0.319183 | 3_4:-4136650 | Msa0486270:CDS |
| TGATGATTGGGTGGTGGGAG+TGG | 0.349559 | 3_4:+4137219 | None:intergenic |
| CACGCTGTATCGGAGCTTAT+CGG | 0.371706 | 3_4:-4136968 | Msa0486270:CDS |
| GTGGAAATTCCATCTAATTT+CGG | 0.372427 | 3_4:+4136620 | None:intergenic |
| TGAGGTGATGATTGGGTGGT+GGG | 0.378568 | 3_4:+4137214 | None:intergenic |
| TGATGATTCTCGAGGAGGTT+TGG | 0.389490 | 3_4:+4137001 | None:intergenic |
| GTGTTATCGCGGGTCGGGTT+GGG | 0.390583 | 3_4:-4136502 | Msa0486270:CDS |
| CACGCAATCCCTTATCTCAT+TGG | 0.395281 | 3_4:-4137161 | Msa0486270:CDS |
| TCAGGATTCGGTGTATGTTT+GGG | 0.398697 | 3_4:+4136879 | None:intergenic |
| GGGTCGGGTTGGGTCAGATT+TGG | 0.399327 | 3_4:-4136492 | Msa0486270:CDS |
| AGTGCAAATCATCTTCAAAT+CGG | 0.403452 | 3_4:-4136924 | Msa0486270:CDS |
| CGTGGTGGATCTTGAAAACT+CGG | 0.422260 | 3_4:+4137127 | None:intergenic |
| TGTTATGGATCTTCAGGATT+CGG | 0.422603 | 3_4:+4136867 | None:intergenic |
| CGTGTTATCGCGGGTCGGGT+TGG | 0.422970 | 3_4:-4136503 | Msa0486270:CDS |
| TCCGGCGGTCGCGGCGGCGA+CGG | 0.425018 | 3_4:+4137408 | None:intergenic |
| AACTCCCGCTCGATGTCATC+AGG | 0.433180 | 3_4:+4136563 | None:intergenic |
| CTGAGGTGATGATTGGGTGG+TGG | 0.435680 | 3_4:+4137213 | None:intergenic |
| CTCCGATACAGCGTGGTTTG+CGG | 0.437651 | 3_4:+4136976 | None:intergenic |
| TGCTTTCACGGTGGTTGTAA+TGG | 0.445907 | 3_4:+4137186 | None:intergenic |
| ATCTCGCCGCACGCGGTGCA+TGG | 0.451668 | 3_4:+4137034 | None:intergenic |
| TATGTGAGTTGGGACACAAC+GGG | 0.453359 | 3_4:-4136706 | Msa0486270:CDS |
| TGGTGGACTGAGGTGATGAT+TGG | 0.454282 | 3_4:+4137206 | None:intergenic |
| TTGTCGTGTTATCGCGGGTC+GGG | 0.457674 | 3_4:-4136507 | Msa0486270:CDS |
| TTAAGTTCATGAACGTCAAA+CGG | 0.460337 | 3_4:-4136541 | Msa0486270:CDS |
| GGATTGCGTGGATGCTTTCA+CGG | 0.461082 | 3_4:+4137174 | None:intergenic |
| TTTCCACGCTGTCGACTAGC+TGG | 0.463808 | 3_4:-4136604 | Msa0486270:CDS |
| CGGGTTGAACCAATGAGATA+AGG | 0.467937 | 3_4:+4137152 | None:intergenic |
| TTGATCCTCATTGTCCACCT+TGG | 0.471213 | 3_4:-4137445 | Msa0486270:CDS |
| AGGGAAGAAGAGGTTGTTAT+CGG | 0.474066 | 3_4:+4137075 | None:intergenic |
| CTCGTTTGTCGTGTTATCGC+GGG | 0.476759 | 3_4:-4136512 | Msa0486270:CDS |
| TGATTGGGTGGTGGGAGTGG+TGG | 0.477345 | 3_4:+4137222 | None:intergenic |
| TAAGTTCATGAACGTCAAAC+GGG | 0.478847 | 3_4:-4136540 | Msa0486270:CDS |
| ACCGTCGCCGCCGCGACCGC+CGG | 0.483078 | 3_4:-4137409 | Msa0486270:CDS |
| GGTGGACTGAGGTGATGATT+GGG | 0.493956 | 3_4:+4137207 | None:intergenic |
| GCTCGTTTGTCGTGTTATCG+CGG | 0.495918 | 3_4:-4136513 | Msa0486270:CDS |
| TCTCGCCGCACGCGGTGCAT+GGG | 0.499631 | 3_4:+4137035 | None:intergenic |
| TCTTTGATGGTAATAATTGA+CGG | 0.507796 | 3_4:+4137374 | None:intergenic |
| GTGCAAATCATCTTCAAATC+GGG | 0.509342 | 3_4:-4136923 | Msa0486270:CDS |
| ATCGGCGGAGATATCTGATT+CGG | 0.513214 | 3_4:+4137093 | None:intergenic |
| GGATCTTGAAAACTCGGGTC+GGG | 0.515307 | 3_4:+4137133 | None:intergenic |
| AAGACTTGATGAGGAGGAGT+TGG | 0.519786 | 3_4:-4136399 | Msa0486270:CDS |
| GCTCTCGCCGCGCGCCATCA+CGG | 0.521082 | 3_4:+4136433 | None:intergenic |
| GGGTTGAACCAATGAGATAA+GGG | 0.524136 | 3_4:+4137153 | None:intergenic |
| CACTATGTTATGACCCGGGT+CGG | 0.525279 | 3_4:+4136943 | None:intergenic |
| ATCCGCAAACCACGCTGTAT+CGG | 0.525656 | 3_4:-4136978 | Msa0486270:CDS |
| TTAGGGTGAGAAGGTGAAGA+GGG | 0.530433 | 3_4:+4137325 | None:intergenic |
| TGCATGGGAAGATGTCATTA+CGG | 0.531768 | 3_4:+4137050 | None:intergenic |
| GATTCGGATTGCTTCTTCCG+TGG | 0.537688 | 3_4:+4137109 | None:intergenic |
| CGGATTGATGATTCTCGAGG+AGG | 0.544832 | 3_4:+4136996 | None:intergenic |
| ATCTTCCCATGCACCGCGTG+CGG | 0.544921 | 3_4:-4137040 | Msa0486270:CDS |
| TGGATCTTGAAAACTCGGGT+CGG | 0.548817 | 3_4:+4137132 | None:intergenic |
| TCGGATTGCTTCTTCCGTGG+TGG | 0.549628 | 3_4:+4137112 | None:intergenic |
| GGAGCTTATCGGATCCGACC+CGG | 0.553645 | 3_4:-4136957 | Msa0486270:CDS |
| TTTGTCGTGTTATCGCGGGT+CGG | 0.555072 | 3_4:-4136508 | Msa0486270:CDS |
| GCGGCGCGTGACACCACGCG+CGG | 0.557337 | 3_4:+4136790 | None:intergenic |
| CGGTGAACATGAAGCATCCA+AGG | 0.563804 | 3_4:+4137428 | None:intergenic |
| GTGATGGCGCGCGGCGAGAG+CGG | 0.566946 | 3_4:-4136431 | Msa0486270:CDS |
| GACGAACGCTGTATCGCCGA+CGG | 0.570666 | 3_4:-4136764 | Msa0486270:CDS |
| GTCAGATTTGGACGATGAGG+TGG | 0.571954 | 3_4:-4136480 | Msa0486270:CDS |
| CTGGAAAATCTCGCCGCACG+CGG | 0.578813 | 3_4:+4137027 | None:intergenic |
| GGACTGAGGTGATGATTGGG+TGG | 0.579372 | 3_4:+4137210 | None:intergenic |
| TTTAGGGTGAGAAGGTGAAG+AGG | 0.580588 | 3_4:+4137324 | None:intergenic |
| ATTTGCACTATGTTATGACC+CGG | 0.580907 | 3_4:+4136938 | None:intergenic |
| TTTGATTCCGTGATGGCGCG+CGG | 0.584494 | 3_4:-4136440 | Msa0486270:CDS |
| GATTCGGTGTATGTTTGGGA+AGG | 0.587325 | 3_4:+4136883 | None:intergenic |
| CAATGAGATAAGGGATTGCG+TGG | 0.593615 | 3_4:+4137162 | None:intergenic |
| GGAAGATGTCATTACGGAGA+GGG | 0.596185 | 3_4:+4137056 | None:intergenic |
| CCACGCTGTCGACTAGCTGG+AGG | 0.602472 | 3_4:-4136601 | Msa0486270:CDS |
| CACGCTGTCGACTAGCTGGA+GGG | 0.602474 | 3_4:-4136600 | Msa0486270:CDS |
| GATGAGGTGGATAAAACCGA+TGG | 0.603948 | 3_4:-4136467 | Msa0486270:CDS |
| ACGAACGCTGTATCGCCGAC+GGG | 0.604136 | 3_4:-4136763 | Msa0486270:CDS |
| AGCATCCAAGGTGGACAATG+AGG | 0.604755 | 3_4:+4137440 | None:intergenic |
| CGGCGATACAGCGTTCGTCA+CGG | 0.606807 | 3_4:+4136768 | None:intergenic |
| TTGCGGATTGATGATTCTCG+AGG | 0.608605 | 3_4:+4136993 | None:intergenic |
| CTATACACAATCACAAAGCA+AGG | 0.609481 | 3_4:+4136350 | None:intergenic |
| ATTCGAAGAATATCGCGAAA+CGG | 0.611767 | 3_4:-4136825 | Msa0486270:CDS |
| ATGAGGTGGATAAAACCGAT+GGG | 0.612087 | 3_4:-4136466 | Msa0486270:CDS |
| AATTCCTGATGACATCGAGC+GGG | 0.613181 | 3_4:-4136567 | Msa0486270:CDS |
| GAGCTTATCGGATCCGACCC+GGG | 0.613363 | 3_4:-4136956 | Msa0486270:CDS |
| GATATTCTTCGAATTTCGAG+AGG | 0.614943 | 3_4:+4136834 | None:intergenic |
| GGGAAGATGTCATTACGGAG+AGG | 0.615177 | 3_4:+4137055 | None:intergenic |
| TGTTTACACAAGACTTGATG+AGG | 0.624213 | 3_4:-4136408 | Msa0486270:CDS |
| AAATCATCTTCAAATCGGGT+TGG | 0.627452 | 3_4:-4136919 | Msa0486270:CDS |
| CATTACGGAGAGGGAAGAAG+AGG | 0.628635 | 3_4:+4137065 | None:intergenic |
| AAGCAAGGAAGAACACCCCT+AGG | 0.629060 | 3_4:+4136365 | None:intergenic |
| CAATTCCTGATGACATCGAG+CGG | 0.650943 | 3_4:-4136568 | Msa0486270:CDS |
| ACGCATGAGTTCATTCCCGT+CGG | 0.655062 | 3_4:+4136748 | None:intergenic |
| TTTGCACTATGTTATGACCC+GGG | 0.656909 | 3_4:+4136939 | None:intergenic |
| TGGGTCAGATTTGGACGATG+AGG | 0.659548 | 3_4:-4136483 | Msa0486270:CDS |
| GTGAAGATTAAAGCCGCGCG+TGG | 0.662281 | 3_4:-4136803 | Msa0486270:CDS |
| TTATGTGAGTTGGGACACAA+CGG | 0.667875 | 3_4:-4136707 | Msa0486270:CDS |
| ATGTGAGTTGGGACACAACG+GGG | 0.671355 | 3_4:-4136705 | Msa0486270:CDS |
| TGAGGTGGATAAAACCGATG+GGG | 0.677373 | 3_4:-4136465 | Msa0486270:CDS |
| GAAGAAGAGGTTGTTATCGG+CGG | 0.680562 | 3_4:+4137078 | None:intergenic |
| GAGGTGGATAAAACCGATGG+GGG | 0.685349 | 3_4:-4136464 | Msa0486270:CDS |
| GTGGTGGATCTTGAAAACTC+GGG | 0.686707 | 3_4:+4137128 | None:intergenic |
| TTGCGTGGATGCTTTCACGG+TGG | 0.689558 | 3_4:+4137177 | None:intergenic |
| TTTCACGGTGGTTGTAATGG+TGG | 0.692003 | 3_4:+4137189 | None:intergenic |
| TTACACAAGACTTGATGAGG+AGG | 0.695990 | 3_4:-4136405 | Msa0486270:CDS |
| TGAACATGAAGCATCCAAGG+TGG | 0.710959 | 3_4:+4137431 | None:intergenic |
| CGATACAGCGTTCGTCACGG+CGG | 0.730307 | 3_4:+4136771 | None:intergenic |
| CCTCCAGCTAGTCGACAGCG+TGG | 0.733625 | 3_4:+4136601 | None:intergenic |
| CGATAAGCTCCGATACAGCG+TGG | 0.733944 | 3_4:+4136969 | None:intergenic |
| GTGGTTGTAATGGTGGACTG+AGG | 0.746411 | 3_4:+4137196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATGGGTTTTGAATTTA+GGG | + | chr3_4:4136525-4136544 | None:intergenic | 20.0% |
| !! | ATTTGTGGAATTATTAAATC+AGG | - | chr3_4:4137180-4137199 | Msa0486270:CDS | 20.0% |
| !!! | TTTTATGGGTTTTGAATTTA+GGG | + | chr3_4:4136525-4136544 | None:intergenic | 20.0% |
| !! | ATTTGTGGAATTATTAAATC+AGG | - | chr3_4:4137180-4137199 | Msa0486270:CDS | 20.0% |
| !! | TCTTTGATGGTAATAATTGA+CGG | + | chr3_4:4136459-4136478 | None:intergenic | 25.0% |
| !!! | GTTTTATGGGTTTTGAATTT+AGG | + | chr3_4:4136526-4136545 | None:intergenic | 25.0% |
| !!! | AGAAGAAGAAAGAGTTTTAT+GGG | + | chr3_4:4136539-4136558 | None:intergenic | 25.0% |
| !! | AAGAAGAAGAAAGAGTTTTA+TGG | + | chr3_4:4136540-4136559 | None:intergenic | 25.0% |
| ! | ATAAAACTCTTTCTTCTTCT+TGG | - | chr3_4:4136539-4136558 | Msa0486270:CDS | 25.0% |
| !! | CAGCAATTTTGTAATATTTG+TGG | - | chr3_4:4137165-4137184 | Msa0486270:CDS | 25.0% |
| !! | TCTTTGATGGTAATAATTGA+CGG | + | chr3_4:4136459-4136478 | None:intergenic | 25.0% |
| !!! | GTTTTATGGGTTTTGAATTT+AGG | + | chr3_4:4136526-4136545 | None:intergenic | 25.0% |
| !!! | AGAAGAAGAAAGAGTTTTAT+GGG | + | chr3_4:4136539-4136558 | None:intergenic | 25.0% |
| !! | AAGAAGAAGAAAGAGTTTTA+TGG | + | chr3_4:4136540-4136559 | None:intergenic | 25.0% |
| ! | ATAAAACTCTTTCTTCTTCT+TGG | - | chr3_4:4136539-4136558 | Msa0486270:CDS | 25.0% |
| !! | CAGCAATTTTGTAATATTTG+TGG | - | chr3_4:4137165-4137184 | Msa0486270:CDS | 25.0% |
| ! | GAGATTTTTCGTTTCTTTGA+TGG | + | chr3_4:4136472-4136491 | None:intergenic | 30.0% |
| ! | TACATGAATTTTTGCAGAAG+AGG | + | chr3_4:4136579-4136598 | None:intergenic | 30.0% |
| AGTGCAAATCATCTTCAAAT+CGG | - | chr3_4:4136906-4136925 | Msa0486270:CDS | 30.0% | |
| !!! | TCCACTTTTTTATGTGAGTT+GGG | - | chr3_4:4137114-4137133 | Msa0486270:CDS | 30.0% |
| GTGGAAATTCCATCTAATTT+CGG | + | chr3_4:4137213-4137232 | None:intergenic | 30.0% | |
| TTAAGTTCATGAACGTCAAA+CGG | - | chr3_4:4137289-4137308 | Msa0486270:CDS | 30.0% | |
| !!! | AGTTGGTTGTTTTTAATCCT+AGG | - | chr3_4:4137448-4137467 | Msa0486270:CDS | 30.0% |
| !!! | GTTGGTTGTTTTTAATCCTA+GGG | - | chr3_4:4137449-4137468 | Msa0486270:CDS | 30.0% |
| !!! | TTGGTTGTTTTTAATCCTAG+GGG | - | chr3_4:4137450-4137469 | Msa0486270:CDS | 30.0% |
| ! | GAGATTTTTCGTTTCTTTGA+TGG | + | chr3_4:4136472-4136491 | None:intergenic | 30.0% |
| ! | TACATGAATTTTTGCAGAAG+AGG | + | chr3_4:4136579-4136598 | None:intergenic | 30.0% |
| AGTGCAAATCATCTTCAAAT+CGG | - | chr3_4:4136906-4136925 | Msa0486270:CDS | 30.0% | |
| !!! | TCCACTTTTTTATGTGAGTT+GGG | - | chr3_4:4137114-4137133 | Msa0486270:CDS | 30.0% |
| GTGGAAATTCCATCTAATTT+CGG | + | chr3_4:4137213-4137232 | None:intergenic | 30.0% | |
| TTAAGTTCATGAACGTCAAA+CGG | - | chr3_4:4137289-4137308 | Msa0486270:CDS | 30.0% | |
| !!! | AGTTGGTTGTTTTTAATCCT+AGG | - | chr3_4:4137448-4137467 | Msa0486270:CDS | 30.0% |
| !!! | GTTGGTTGTTTTTAATCCTA+GGG | - | chr3_4:4137449-4137468 | Msa0486270:CDS | 30.0% |
| !!! | TTGGTTGTTTTTAATCCTAG+GGG | - | chr3_4:4137450-4137469 | Msa0486270:CDS | 30.0% |
| !!! | TTGACGGTTATCTTGTTTTC+CGG | + | chr3_4:4136443-4136462 | None:intergenic | 35.0% |
| !! | GTTTTGAATTTAGGGTGAGA+AGG | + | chr3_4:4136517-4136536 | None:intergenic | 35.0% |
| ATTTGCACTATGTTATGACC+CGG | + | chr3_4:4136895-4136914 | None:intergenic | 35.0% | |
| GTGCAAATCATCTTCAAATC+GGG | - | chr3_4:4136907-4136926 | Msa0486270:CDS | 35.0% | |
| AAATCATCTTCAAATCGGGT+TGG | - | chr3_4:4136911-4136930 | Msa0486270:CDS | 35.0% | |
| TGTTATGGATCTTCAGGATT+CGG | + | chr3_4:4136966-4136985 | None:intergenic | 35.0% | |
| GATATTCTTCGAATTTCGAG+AGG | + | chr3_4:4136999-4137018 | None:intergenic | 35.0% | |
| ATTCGAAGAATATCGCGAAA+CGG | - | chr3_4:4137005-4137024 | Msa0486270:CDS | 35.0% | |
| !!! | CTCCACTTTTTTATGTGAGT+TGG | - | chr3_4:4137113-4137132 | Msa0486270:CDS | 35.0% |
| TCCCAACTCACATAAAAAAG+TGG | + | chr3_4:4137118-4137137 | None:intergenic | 35.0% | |
| TAAGTTCATGAACGTCAAAC+GGG | - | chr3_4:4137290-4137309 | Msa0486270:CDS | 35.0% | |
| TGTTTACACAAGACTTGATG+AGG | - | chr3_4:4137422-4137441 | Msa0486270:CDS | 35.0% | |
| CTATACACAATCACAAAGCA+AGG | + | chr3_4:4137483-4137502 | None:intergenic | 35.0% | |
| !!! | TTGACGGTTATCTTGTTTTC+CGG | + | chr3_4:4136443-4136462 | None:intergenic | 35.0% |
| !! | GTTTTGAATTTAGGGTGAGA+AGG | + | chr3_4:4136517-4136536 | None:intergenic | 35.0% |
| ATTTGCACTATGTTATGACC+CGG | + | chr3_4:4136895-4136914 | None:intergenic | 35.0% | |
| GTGCAAATCATCTTCAAATC+GGG | - | chr3_4:4136907-4136926 | Msa0486270:CDS | 35.0% | |
| AAATCATCTTCAAATCGGGT+TGG | - | chr3_4:4136911-4136930 | Msa0486270:CDS | 35.0% | |
| TGTTATGGATCTTCAGGATT+CGG | + | chr3_4:4136966-4136985 | None:intergenic | 35.0% | |
| GATATTCTTCGAATTTCGAG+AGG | + | chr3_4:4136999-4137018 | None:intergenic | 35.0% | |
| ATTCGAAGAATATCGCGAAA+CGG | - | chr3_4:4137005-4137024 | Msa0486270:CDS | 35.0% | |
| !!! | CTCCACTTTTTTATGTGAGT+TGG | - | chr3_4:4137113-4137132 | Msa0486270:CDS | 35.0% |
| TCCCAACTCACATAAAAAAG+TGG | + | chr3_4:4137118-4137137 | None:intergenic | 35.0% | |
| TAAGTTCATGAACGTCAAAC+GGG | - | chr3_4:4137290-4137309 | Msa0486270:CDS | 35.0% | |
| TGTTTACACAAGACTTGATG+AGG | - | chr3_4:4137422-4137441 | Msa0486270:CDS | 35.0% | |
| CTATACACAATCACAAAGCA+AGG | + | chr3_4:4137483-4137502 | None:intergenic | 35.0% | |
| GGGTTGAACCAATGAGATAA+GGG | + | chr3_4:4136680-4136699 | None:intergenic | 40.0% | |
| AGGGAAGAAGAGGTTGTTAT+CGG | + | chr3_4:4136758-4136777 | None:intergenic | 40.0% | |
| TGCATGGGAAGATGTCATTA+CGG | + | chr3_4:4136783-4136802 | None:intergenic | 40.0% | |
| TTTGCACTATGTTATGACCC+GGG | + | chr3_4:4136894-4136913 | None:intergenic | 40.0% | |
| !! | TTTGGGAAGGTGTTTGTTTC+GGG | + | chr3_4:4136937-4136956 | None:intergenic | 40.0% |
| !! | GTTTGGGAAGGTGTTTGTTT+CGG | + | chr3_4:4136938-4136957 | None:intergenic | 40.0% |
| !! | TCAGGATTCGGTGTATGTTT+GGG | + | chr3_4:4136954-4136973 | None:intergenic | 40.0% |
| !! | TTCAGGATTCGGTGTATGTT+TGG | + | chr3_4:4136955-4136974 | None:intergenic | 40.0% |
| !!! | AGAGGATTTTCTGGCTGTTA+TGG | + | chr3_4:4136981-4137000 | None:intergenic | 40.0% |
| ! | CGAATTTCGAGAGGATTTTC+TGG | + | chr3_4:4136990-4137009 | None:intergenic | 40.0% |
| ! | TTATGTGAGTTGGGACACAA+CGG | - | chr3_4:4137123-4137142 | Msa0486270:CDS | 40.0% |
| ! | GGATTTTCGCCGAAATTAGA+TGG | - | chr3_4:4137201-4137220 | Msa0486270:CDS | 40.0% |
| ATGAGGTGGATAAAACCGAT+GGG | - | chr3_4:4137364-4137383 | Msa0486270:CDS | 40.0% | |
| TTACACAAGACTTGATGAGG+AGG | - | chr3_4:4137425-4137444 | Msa0486270:CDS | 40.0% | |
| GGGTTGAACCAATGAGATAA+GGG | + | chr3_4:4136680-4136699 | None:intergenic | 40.0% | |
| AGGGAAGAAGAGGTTGTTAT+CGG | + | chr3_4:4136758-4136777 | None:intergenic | 40.0% | |
| TGCATGGGAAGATGTCATTA+CGG | + | chr3_4:4136783-4136802 | None:intergenic | 40.0% | |
| TTTGCACTATGTTATGACCC+GGG | + | chr3_4:4136894-4136913 | None:intergenic | 40.0% | |
| !! | TTTGGGAAGGTGTTTGTTTC+GGG | + | chr3_4:4136937-4136956 | None:intergenic | 40.0% |
| !! | GTTTGGGAAGGTGTTTGTTT+CGG | + | chr3_4:4136938-4136957 | None:intergenic | 40.0% |
| !! | TCAGGATTCGGTGTATGTTT+GGG | + | chr3_4:4136954-4136973 | None:intergenic | 40.0% |
| !! | TTCAGGATTCGGTGTATGTT+TGG | + | chr3_4:4136955-4136974 | None:intergenic | 40.0% |
| !!! | AGAGGATTTTCTGGCTGTTA+TGG | + | chr3_4:4136981-4137000 | None:intergenic | 40.0% |
| ! | CGAATTTCGAGAGGATTTTC+TGG | + | chr3_4:4136990-4137009 | None:intergenic | 40.0% |
| ! | TTATGTGAGTTGGGACACAA+CGG | - | chr3_4:4137123-4137142 | Msa0486270:CDS | 40.0% |
| ! | GGATTTTCGCCGAAATTAGA+TGG | - | chr3_4:4137201-4137220 | Msa0486270:CDS | 40.0% |
| ATGAGGTGGATAAAACCGAT+GGG | - | chr3_4:4137364-4137383 | Msa0486270:CDS | 40.0% | |
| TTACACAAGACTTGATGAGG+AGG | - | chr3_4:4137425-4137444 | Msa0486270:CDS | 40.0% | |
| TTGATCCTCATTGTCCACCT+TGG | - | chr3_4:4136385-4136404 | Msa0486270:CDS | 45.0% | |
| ! | TGAACATGAAGCATCCAAGG+TGG | + | chr3_4:4136402-4136421 | None:intergenic | 45.0% |
| !!! | ACGGTTATCTTGTTTTCCGG+CGG | + | chr3_4:4136440-4136459 | None:intergenic | 45.0% |
| GGTGAAGAGGGTTGTGATAA+AGG | + | chr3_4:4136496-4136515 | None:intergenic | 45.0% | |
| TTAGGGTGAGAAGGTGAAGA+GGG | + | chr3_4:4136508-4136527 | None:intergenic | 45.0% | |
| ! | TTTAGGGTGAGAAGGTGAAG+AGG | + | chr3_4:4136509-4136528 | None:intergenic | 45.0% |
| TTTCACGGTGGTTGTAATGG+TGG | + | chr3_4:4136644-4136663 | None:intergenic | 45.0% | |
| TGCTTTCACGGTGGTTGTAA+TGG | + | chr3_4:4136647-4136666 | None:intergenic | 45.0% | |
| CAATGAGATAAGGGATTGCG+TGG | + | chr3_4:4136671-4136690 | None:intergenic | 45.0% | |
| CACGCAATCCCTTATCTCAT+TGG | - | chr3_4:4136669-4136688 | Msa0486270:CDS | 45.0% | |
| ! | CGGGTTGAACCAATGAGATA+AGG | + | chr3_4:4136681-4136700 | None:intergenic | 45.0% |
| TGGATCTTGAAAACTCGGGT+CGG | + | chr3_4:4136701-4136720 | None:intergenic | 45.0% | |
| !! | GTGGTGGATCTTGAAAACTC+GGG | + | chr3_4:4136705-4136724 | None:intergenic | 45.0% |
| !! | CGTGGTGGATCTTGAAAACT+CGG | + | chr3_4:4136706-4136725 | None:intergenic | 45.0% |
| !! | CGAGTTTTCAAGATCCACCA+CGG | - | chr3_4:4136704-4136723 | Msa0486270:CDS | 45.0% |
| ATCGGCGGAGATATCTGATT+CGG | + | chr3_4:4136740-4136759 | None:intergenic | 45.0% | |
| GAAGAAGAGGTTGTTATCGG+CGG | + | chr3_4:4136755-4136774 | None:intergenic | 45.0% | |
| GGAAGATGTCATTACGGAGA+GGG | + | chr3_4:4136777-4136796 | None:intergenic | 45.0% | |
| TGATGATTCTCGAGGAGGTT+TGG | + | chr3_4:4136832-4136851 | None:intergenic | 45.0% | |
| ! | TTGCGGATTGATGATTCTCG+AGG | + | chr3_4:4136840-4136859 | None:intergenic | 45.0% |
| !! | GATTCGGTGTATGTTTGGGA+AGG | + | chr3_4:4136950-4136969 | None:intergenic | 45.0% |
| TCTGGCTGTTATGGATCTTC+AGG | + | chr3_4:4136972-4136991 | None:intergenic | 45.0% | |
| ! | TATGTGAGTTGGGACACAAC+GGG | - | chr3_4:4137124-4137143 | Msa0486270:CDS | 45.0% |
| CAATTCCTGATGACATCGAG+CGG | - | chr3_4:4137262-4137281 | Msa0486270:CDS | 45.0% | |
| AATTCCTGATGACATCGAGC+GGG | - | chr3_4:4137263-4137282 | Msa0486270:CDS | 45.0% | |
| GATGAGGTGGATAAAACCGA+TGG | - | chr3_4:4137363-4137382 | Msa0486270:CDS | 45.0% | |
| TGAGGTGGATAAAACCGATG+GGG | - | chr3_4:4137365-4137384 | Msa0486270:CDS | 45.0% | |
| AAGACTTGATGAGGAGGAGT+TGG | - | chr3_4:4137431-4137450 | Msa0486270:CDS | 45.0% | |
| TTGATCCTCATTGTCCACCT+TGG | - | chr3_4:4136385-4136404 | Msa0486270:CDS | 45.0% | |
| ! | TGAACATGAAGCATCCAAGG+TGG | + | chr3_4:4136402-4136421 | None:intergenic | 45.0% |
| !!! | ACGGTTATCTTGTTTTCCGG+CGG | + | chr3_4:4136440-4136459 | None:intergenic | 45.0% |
| GGTGAAGAGGGTTGTGATAA+AGG | + | chr3_4:4136496-4136515 | None:intergenic | 45.0% | |
| TTAGGGTGAGAAGGTGAAGA+GGG | + | chr3_4:4136508-4136527 | None:intergenic | 45.0% | |
| ! | TTTAGGGTGAGAAGGTGAAG+AGG | + | chr3_4:4136509-4136528 | None:intergenic | 45.0% |
| TTTCACGGTGGTTGTAATGG+TGG | + | chr3_4:4136644-4136663 | None:intergenic | 45.0% | |
| TGCTTTCACGGTGGTTGTAA+TGG | + | chr3_4:4136647-4136666 | None:intergenic | 45.0% | |
| CAATGAGATAAGGGATTGCG+TGG | + | chr3_4:4136671-4136690 | None:intergenic | 45.0% | |
| CACGCAATCCCTTATCTCAT+TGG | - | chr3_4:4136669-4136688 | Msa0486270:CDS | 45.0% | |
| ! | CGGGTTGAACCAATGAGATA+AGG | + | chr3_4:4136681-4136700 | None:intergenic | 45.0% |
| TGGATCTTGAAAACTCGGGT+CGG | + | chr3_4:4136701-4136720 | None:intergenic | 45.0% | |
| !! | GTGGTGGATCTTGAAAACTC+GGG | + | chr3_4:4136705-4136724 | None:intergenic | 45.0% |
| !! | CGTGGTGGATCTTGAAAACT+CGG | + | chr3_4:4136706-4136725 | None:intergenic | 45.0% |
| !! | CGAGTTTTCAAGATCCACCA+CGG | - | chr3_4:4136704-4136723 | Msa0486270:CDS | 45.0% |
| ATCGGCGGAGATATCTGATT+CGG | + | chr3_4:4136740-4136759 | None:intergenic | 45.0% | |
| GAAGAAGAGGTTGTTATCGG+CGG | + | chr3_4:4136755-4136774 | None:intergenic | 45.0% | |
| GGAAGATGTCATTACGGAGA+GGG | + | chr3_4:4136777-4136796 | None:intergenic | 45.0% | |
| TGATGATTCTCGAGGAGGTT+TGG | + | chr3_4:4136832-4136851 | None:intergenic | 45.0% | |
| ! | TTGCGGATTGATGATTCTCG+AGG | + | chr3_4:4136840-4136859 | None:intergenic | 45.0% |
| !! | GATTCGGTGTATGTTTGGGA+AGG | + | chr3_4:4136950-4136969 | None:intergenic | 45.0% |
| TCTGGCTGTTATGGATCTTC+AGG | + | chr3_4:4136972-4136991 | None:intergenic | 45.0% | |
| ! | TATGTGAGTTGGGACACAAC+GGG | - | chr3_4:4137124-4137143 | Msa0486270:CDS | 45.0% |
| CAATTCCTGATGACATCGAG+CGG | - | chr3_4:4137262-4137281 | Msa0486270:CDS | 45.0% | |
| AATTCCTGATGACATCGAGC+GGG | - | chr3_4:4137263-4137282 | Msa0486270:CDS | 45.0% | |
| GATGAGGTGGATAAAACCGA+TGG | - | chr3_4:4137363-4137382 | Msa0486270:CDS | 45.0% | |
| TGAGGTGGATAAAACCGATG+GGG | - | chr3_4:4137365-4137384 | Msa0486270:CDS | 45.0% | |
| AAGACTTGATGAGGAGGAGT+TGG | - | chr3_4:4137431-4137450 | Msa0486270:CDS | 45.0% | |
| AGCATCCAAGGTGGACAATG+AGG | + | chr3_4:4136393-4136412 | None:intergenic | 50.0% | |
| ! | CGGTGAACATGAAGCATCCA+AGG | + | chr3_4:4136405-4136424 | None:intergenic | 50.0% |
| TGAGGTGATGATTGGGTGGT+GGG | + | chr3_4:4136619-4136638 | None:intergenic | 50.0% | |
| !! | GGTGGACTGAGGTGATGATT+GGG | + | chr3_4:4136626-4136645 | None:intergenic | 50.0% |
| !! | TGGTGGACTGAGGTGATGAT+TGG | + | chr3_4:4136627-4136646 | None:intergenic | 50.0% |
| !! | GTGGTTGTAATGGTGGACTG+AGG | + | chr3_4:4136637-4136656 | None:intergenic | 50.0% |
| GGATTGCGTGGATGCTTTCA+CGG | + | chr3_4:4136659-4136678 | None:intergenic | 50.0% | |
| GGATCTTGAAAACTCGGGTC+GGG | + | chr3_4:4136700-4136719 | None:intergenic | 50.0% | |
| GATTCGGATTGCTTCTTCCG+TGG | + | chr3_4:4136724-4136743 | None:intergenic | 50.0% | |
| CATTACGGAGAGGGAAGAAG+AGG | + | chr3_4:4136768-4136787 | None:intergenic | 50.0% | |
| GGGAAGATGTCATTACGGAG+AGG | + | chr3_4:4136778-4136797 | None:intergenic | 50.0% | |
| ! | TCTCGAGGAGGTTTGGTTTC+TGG | + | chr3_4:4136825-4136844 | None:intergenic | 50.0% |
| ! | CGGATTGATGATTCTCGAGG+AGG | + | chr3_4:4136837-4136856 | None:intergenic | 50.0% |
| ATCCGCAAACCACGCTGTAT+CGG | - | chr3_4:4136852-4136871 | Msa0486270:CDS | 50.0% | |
| CACGCTGTATCGGAGCTTAT+CGG | - | chr3_4:4136862-4136881 | Msa0486270:CDS | 50.0% | |
| CACTATGTTATGACCCGGGT+CGG | + | chr3_4:4136890-4136909 | None:intergenic | 50.0% | |
| ACGCATGAGTTCATTCCCGT+CGG | + | chr3_4:4137085-4137104 | None:intergenic | 50.0% | |
| ! | ATGTGAGTTGGGACACAACG+GGG | - | chr3_4:4137125-4137144 | Msa0486270:CDS | 50.0% |
| GCTCGTTTGTCGTGTTATCG+CGG | - | chr3_4:4137317-4137336 | Msa0486270:CDS | 50.0% | |
| CTCGTTTGTCGTGTTATCGC+GGG | - | chr3_4:4137318-4137337 | Msa0486270:CDS | 50.0% | |
| TTTGTCGTGTTATCGCGGGT+CGG | - | chr3_4:4137322-4137341 | Msa0486270:CDS | 50.0% | |
| TGGGTCAGATTTGGACGATG+AGG | - | chr3_4:4137347-4137366 | Msa0486270:CDS | 50.0% | |
| GTCAGATTTGGACGATGAGG+TGG | - | chr3_4:4137350-4137369 | Msa0486270:CDS | 50.0% | |
| GAGGTGGATAAAACCGATGG+GGG | - | chr3_4:4137366-4137385 | Msa0486270:CDS | 50.0% | |
| CACGGAATCAAAACCCCCAT+CGG | + | chr3_4:4137382-4137401 | None:intergenic | 50.0% | |
| !!! | TGGGGGTTTTGATTCCGTGA+TGG | - | chr3_4:4137383-4137402 | Msa0486270:CDS | 50.0% |
| AAGCAAGGAAGAACACCCCT+AGG | + | chr3_4:4137468-4137487 | None:intergenic | 50.0% | |
| AGCATCCAAGGTGGACAATG+AGG | + | chr3_4:4136393-4136412 | None:intergenic | 50.0% | |
| ! | CGGTGAACATGAAGCATCCA+AGG | + | chr3_4:4136405-4136424 | None:intergenic | 50.0% |
| TGAGGTGATGATTGGGTGGT+GGG | + | chr3_4:4136619-4136638 | None:intergenic | 50.0% | |
| !! | GGTGGACTGAGGTGATGATT+GGG | + | chr3_4:4136626-4136645 | None:intergenic | 50.0% |
| !! | TGGTGGACTGAGGTGATGAT+TGG | + | chr3_4:4136627-4136646 | None:intergenic | 50.0% |
| !! | GTGGTTGTAATGGTGGACTG+AGG | + | chr3_4:4136637-4136656 | None:intergenic | 50.0% |
| GGATTGCGTGGATGCTTTCA+CGG | + | chr3_4:4136659-4136678 | None:intergenic | 50.0% | |
| GGATCTTGAAAACTCGGGTC+GGG | + | chr3_4:4136700-4136719 | None:intergenic | 50.0% | |
| GATTCGGATTGCTTCTTCCG+TGG | + | chr3_4:4136724-4136743 | None:intergenic | 50.0% | |
| CATTACGGAGAGGGAAGAAG+AGG | + | chr3_4:4136768-4136787 | None:intergenic | 50.0% | |
| GGGAAGATGTCATTACGGAG+AGG | + | chr3_4:4136778-4136797 | None:intergenic | 50.0% | |
| ! | TCTCGAGGAGGTTTGGTTTC+TGG | + | chr3_4:4136825-4136844 | None:intergenic | 50.0% |
| ! | CGGATTGATGATTCTCGAGG+AGG | + | chr3_4:4136837-4136856 | None:intergenic | 50.0% |
| ATCCGCAAACCACGCTGTAT+CGG | - | chr3_4:4136852-4136871 | Msa0486270:CDS | 50.0% | |
| CACGCTGTATCGGAGCTTAT+CGG | - | chr3_4:4136862-4136881 | Msa0486270:CDS | 50.0% | |
| CACTATGTTATGACCCGGGT+CGG | + | chr3_4:4136890-4136909 | None:intergenic | 50.0% | |
| ACGCATGAGTTCATTCCCGT+CGG | + | chr3_4:4137085-4137104 | None:intergenic | 50.0% | |
| ! | ATGTGAGTTGGGACACAACG+GGG | - | chr3_4:4137125-4137144 | Msa0486270:CDS | 50.0% |
| GCTCGTTTGTCGTGTTATCG+CGG | - | chr3_4:4137317-4137336 | Msa0486270:CDS | 50.0% | |
| CTCGTTTGTCGTGTTATCGC+GGG | - | chr3_4:4137318-4137337 | Msa0486270:CDS | 50.0% | |
| TTTGTCGTGTTATCGCGGGT+CGG | - | chr3_4:4137322-4137341 | Msa0486270:CDS | 50.0% | |
| TGGGTCAGATTTGGACGATG+AGG | - | chr3_4:4137347-4137366 | Msa0486270:CDS | 50.0% | |
| GTCAGATTTGGACGATGAGG+TGG | - | chr3_4:4137350-4137369 | Msa0486270:CDS | 50.0% | |
| GAGGTGGATAAAACCGATGG+GGG | - | chr3_4:4137366-4137385 | Msa0486270:CDS | 50.0% | |
| CACGGAATCAAAACCCCCAT+CGG | + | chr3_4:4137382-4137401 | None:intergenic | 50.0% | |
| !!! | TGGGGGTTTTGATTCCGTGA+TGG | - | chr3_4:4137383-4137402 | Msa0486270:CDS | 50.0% |
| AAGCAAGGAAGAACACCCCT+AGG | + | chr3_4:4137468-4137487 | None:intergenic | 50.0% | |
| !!! | ATCTTGTTTTCCGGCGGTCG+CGG | + | chr3_4:4136434-4136453 | None:intergenic | 55.0% |
| !! | TGATGATTGGGTGGTGGGAG+TGG | + | chr3_4:4136614-4136633 | None:intergenic | 55.0% |
| CTGAGGTGATGATTGGGTGG+TGG | + | chr3_4:4136620-4136639 | None:intergenic | 55.0% | |
| GGACTGAGGTGATGATTGGG+TGG | + | chr3_4:4136623-4136642 | None:intergenic | 55.0% | |
| TTGCGTGGATGCTTTCACGG+TGG | + | chr3_4:4136656-4136675 | None:intergenic | 55.0% | |
| TCGGATTGCTTCTTCCGTGG+TGG | + | chr3_4:4136721-4136740 | None:intergenic | 55.0% | |
| CTCCGATACAGCGTGGTTTG+CGG | + | chr3_4:4136857-4136876 | None:intergenic | 55.0% | |
| CGATAAGCTCCGATACAGCG+TGG | + | chr3_4:4136864-4136883 | None:intergenic | 55.0% | |
| GTGAAGATTAAAGCCGCGCG+TGG | - | chr3_4:4137027-4137046 | Msa0486270:CDS | 55.0% | |
| ! | TTTCCACGCTGTCGACTAGC+TGG | - | chr3_4:4137226-4137245 | Msa0486270:CDS | 55.0% |
| AACTCCCGCTCGATGTCATC+AGG | + | chr3_4:4137270-4137289 | None:intergenic | 55.0% | |
| TTGTCGTGTTATCGCGGGTC+GGG | - | chr3_4:4137323-4137342 | Msa0486270:CDS | 55.0% | |
| ! | TTTGATTCCGTGATGGCGCG+CGG | - | chr3_4:4137390-4137409 | Msa0486270:CDS | 55.0% |
| !!! | ATCTTGTTTTCCGGCGGTCG+CGG | + | chr3_4:4136434-4136453 | None:intergenic | 55.0% |
| !! | TGATGATTGGGTGGTGGGAG+TGG | + | chr3_4:4136614-4136633 | None:intergenic | 55.0% |
| CTGAGGTGATGATTGGGTGG+TGG | + | chr3_4:4136620-4136639 | None:intergenic | 55.0% | |
| GGACTGAGGTGATGATTGGG+TGG | + | chr3_4:4136623-4136642 | None:intergenic | 55.0% | |
| TTGCGTGGATGCTTTCACGG+TGG | + | chr3_4:4136656-4136675 | None:intergenic | 55.0% | |
| TCGGATTGCTTCTTCCGTGG+TGG | + | chr3_4:4136721-4136740 | None:intergenic | 55.0% | |
| CTCCGATACAGCGTGGTTTG+CGG | + | chr3_4:4136857-4136876 | None:intergenic | 55.0% | |
| CGATAAGCTCCGATACAGCG+TGG | + | chr3_4:4136864-4136883 | None:intergenic | 55.0% | |
| GTGAAGATTAAAGCCGCGCG+TGG | - | chr3_4:4137027-4137046 | Msa0486270:CDS | 55.0% | |
| ! | TTTCCACGCTGTCGACTAGC+TGG | - | chr3_4:4137226-4137245 | Msa0486270:CDS | 55.0% |
| AACTCCCGCTCGATGTCATC+AGG | + | chr3_4:4137270-4137289 | None:intergenic | 55.0% | |
| TTGTCGTGTTATCGCGGGTC+GGG | - | chr3_4:4137323-4137342 | Msa0486270:CDS | 55.0% | |
| ! | TTTGATTCCGTGATGGCGCG+CGG | - | chr3_4:4137390-4137409 | Msa0486270:CDS | 55.0% |
| !! | TGATTGGGTGGTGGGAGTGG+TGG | + | chr3_4:4136611-4136630 | None:intergenic | 60.0% |
| ATCTTCCCATGCACCGCGTG+CGG | - | chr3_4:4136790-4136809 | Msa0486270:CDS | 60.0% | |
| CTGGAAAATCTCGCCGCACG+CGG | + | chr3_4:4136806-4136825 | None:intergenic | 60.0% | |
| GGAGCTTATCGGATCCGACC+CGG | - | chr3_4:4136873-4136892 | Msa0486270:CDS | 60.0% | |
| GAGCTTATCGGATCCGACCC+GGG | - | chr3_4:4136874-4136893 | Msa0486270:CDS | 60.0% | |
| CGATACAGCGTTCGTCACGG+CGG | + | chr3_4:4137062-4137081 | None:intergenic | 60.0% | |
| CGGCGATACAGCGTTCGTCA+CGG | + | chr3_4:4137065-4137084 | None:intergenic | 60.0% | |
| GACGAACGCTGTATCGCCGA+CGG | - | chr3_4:4137066-4137085 | Msa0486270:CDS | 60.0% | |
| ACGAACGCTGTATCGCCGAC+GGG | - | chr3_4:4137067-4137086 | Msa0486270:CDS | 60.0% | |
| ! | CACGCTGTCGACTAGCTGGA+GGG | - | chr3_4:4137230-4137249 | Msa0486270:CDS | 60.0% |
| GTGTTATCGCGGGTCGGGTT+GGG | - | chr3_4:4137328-4137347 | Msa0486270:CDS | 60.0% | |
| !! | GGGTCGGGTTGGGTCAGATT+TGG | - | chr3_4:4137338-4137357 | Msa0486270:CDS | 60.0% |
| !! | TGATTGGGTGGTGGGAGTGG+TGG | + | chr3_4:4136611-4136630 | None:intergenic | 60.0% |
| ATCTTCCCATGCACCGCGTG+CGG | - | chr3_4:4136790-4136809 | Msa0486270:CDS | 60.0% | |
| CTGGAAAATCTCGCCGCACG+CGG | + | chr3_4:4136806-4136825 | None:intergenic | 60.0% | |
| GGAGCTTATCGGATCCGACC+CGG | - | chr3_4:4136873-4136892 | Msa0486270:CDS | 60.0% | |
| GAGCTTATCGGATCCGACCC+GGG | - | chr3_4:4136874-4136893 | Msa0486270:CDS | 60.0% | |
| CGATACAGCGTTCGTCACGG+CGG | + | chr3_4:4137062-4137081 | None:intergenic | 60.0% | |
| CGGCGATACAGCGTTCGTCA+CGG | + | chr3_4:4137065-4137084 | None:intergenic | 60.0% | |
| GACGAACGCTGTATCGCCGA+CGG | - | chr3_4:4137066-4137085 | Msa0486270:CDS | 60.0% | |
| ACGAACGCTGTATCGCCGAC+GGG | - | chr3_4:4137067-4137086 | Msa0486270:CDS | 60.0% | |
| ! | CACGCTGTCGACTAGCTGGA+GGG | - | chr3_4:4137230-4137249 | Msa0486270:CDS | 60.0% |
| GTGTTATCGCGGGTCGGGTT+GGG | - | chr3_4:4137328-4137347 | Msa0486270:CDS | 60.0% | |
| !! | GGGTCGGGTTGGGTCAGATT+TGG | - | chr3_4:4137338-4137357 | Msa0486270:CDS | 60.0% |
| ! | TTGTTTTCCGGCGGTCGCGG+CGG | + | chr3_4:4136431-4136450 | None:intergenic | 65.0% |
| CCTCCAGCTAGTCGACAGCG+TGG | + | chr3_4:4137232-4137251 | None:intergenic | 65.0% | |
| ! | CCACGCTGTCGACTAGCTGG+AGG | - | chr3_4:4137229-4137248 | Msa0486270:CDS | 65.0% |
| CGTGTTATCGCGGGTCGGGT+TGG | - | chr3_4:4137327-4137346 | Msa0486270:CDS | 65.0% | |
| ! | TTGTTTTCCGGCGGTCGCGG+CGG | + | chr3_4:4136431-4136450 | None:intergenic | 65.0% |
| CCTCCAGCTAGTCGACAGCG+TGG | + | chr3_4:4137232-4137251 | None:intergenic | 65.0% | |
| ! | CCACGCTGTCGACTAGCTGG+AGG | - | chr3_4:4137229-4137248 | Msa0486270:CDS | 65.0% |
| CGTGTTATCGCGGGTCGGGT+TGG | - | chr3_4:4137327-4137346 | Msa0486270:CDS | 65.0% | |
| TCTCGCCGCACGCGGTGCAT+GGG | + | chr3_4:4136798-4136817 | None:intergenic | 70.0% | |
| ATCTCGCCGCACGCGGTGCA+TGG | + | chr3_4:4136799-4136818 | None:intergenic | 70.0% | |
| TCTCGCCGCACGCGGTGCAT+GGG | + | chr3_4:4136798-4136817 | None:intergenic | 70.0% | |
| ATCTCGCCGCACGCGGTGCA+TGG | + | chr3_4:4136799-4136818 | None:intergenic | 70.0% | |
| GCTCTCGCCGCGCGCCATCA+CGG | + | chr3_4:4137400-4137419 | None:intergenic | 75.0% | |
| ! | GTGATGGCGCGCGGCGAGAG+CGG | - | chr3_4:4137399-4137418 | Msa0486270:CDS | 75.0% |
| GCTCTCGCCGCGCGCCATCA+CGG | + | chr3_4:4137400-4137419 | None:intergenic | 75.0% | |
| ! | GTGATGGCGCGCGGCGAGAG+CGG | - | chr3_4:4137399-4137418 | Msa0486270:CDS | 75.0% |
| ! | GCGGCGCGTGACACCACGCG+CGG | + | chr3_4:4137043-4137062 | None:intergenic | 80.0% |
| ! | GCGGCGCGTGACACCACGCG+CGG | + | chr3_4:4137043-4137062 | None:intergenic | 80.0% |
| ! | ACCGTCGCCGCCGCGACCGC+CGG | - | chr3_4:4136421-4136440 | Msa0486270:CDS | 85.0% |
| ! | TCCGGCGGTCGCGGCGGCGA+CGG | + | chr3_4:4136425-4136444 | None:intergenic | 85.0% |
| ! | ACCGTCGCCGCCGCGACCGC+CGG | - | chr3_4:4136421-4136440 | Msa0486270:CDS | 85.0% |
| ! | TCCGGCGGTCGCGGCGGCGA+CGG | + | chr3_4:4136425-4136444 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 4136343 | 4137509 | 4136343 | ID=Msa0486270;Name=Msa0486270 |
| chr3_4 | mRNA | 4136343 | 4137509 | 4136343 | ID=Msa0486270-mRNA-1;Parent=Msa0486270;Name=Msa0486270-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|388 |
| chr3_4 | exon | 4136343 | 4137509 | 4136343 | ID=Msa0486270-mRNA-1:exon:1589;Parent=Msa0486270-mRNA-1 |
| chr3_4 | CDS | 4136343 | 4137509 | 4136343 | ID=Msa0486270-mRNA-1:cds;Parent=Msa0486270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
